Citrus Sinensis ID: 020334

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------
Protein Sequence
MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAIKCCKERGYL
Secondary Structure (PSIPRED)
cccccccEEEcccccHHHHHHHHHHHHcccEEEEEEcccccccHHHHHHHccccccccEEEEEccccccccHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEEEccccccccccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccccHHHHHHHHccccccccccccccEEEHHHHHHHHHHHcccccccccEEEEcccccHHHHHHHHHHHccccccccccccccccccccccccHHHHHHccccccccHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHcccccHHEEEEEccccccccHHHHHcccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccEEEEEcccccccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccEEEcccccccccHHHHHHHHHHcccHHHHHHHHcccEEEHHHHHHHHHHHHcccccccEEEEccccccHHHHHHHHHHHcccccccccccccccccccccEEcHHHHHHcccEEEccHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
meeqkgkvcvtggtgfiGSWLIMRLLDHGYfvtttvrsdpehkkdlsfltnlpgaseRLQIFnadlndpesfDAAIAGCAGVIHvaapididgkETEEVMTQRAVNGTIGILKSCLksgtvkrfvytssgstvyfsgkdvdmldetfwsdedYIRKLDIWGKSYVLTKTLTERAALEFAEEHGldlvtlipsfvvgpficpkfagsVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLeypdakgryiCSSAKLTIQEMAEFLsakhpeypipnvdslseiegyklsALSSKKLLDICFTYKYGIDEMFDGAIKCCKERGYL
Flexible Loop (DISEMBL)
meeqkgkvcvtggTGFIGSWLIMRLLDHGYFVTTTvrsdpehkkDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQravngtigilksclksgtVKRFVYtssgstvyfsgkdvdMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAIKCCKERGYL
Low Complexity Region (SEG)
MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYklsalsskkllDICFTYKYGIDEMFDGAIKCCKERGYL
Disordered region (IsUnstruct)
******KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRS*******LSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAIKCCK*****
Disordered Region (DISOPRED)
****KGK**VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAIKCCKERGYL
Disordered Region (DISEMBL)
********CVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAIKCCKERGYL
Disordered Region (DISPRO)
****KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAIKCCKER***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAIKCCKERGYL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	327	2.2.26 [Sep-21-2011]
P51102	382	Dihydroflavonol-4-reducta	no	no	0.978	0.837	0.457	4e-80
P51106	354	Dihydroflavonol-4-reducta	N/A	no	0.978	0.903	0.442	3e-79
Q9XES5	348	Bifunctional dihydroflavo	N/A	no	0.978	0.919	0.427	5e-77
Q84KP0	347	Bifunctional dihydroflavo	N/A	no	0.978	0.922	0.421	3e-76
P51110	337	Dihydroflavonol-4-reducta	no	no	0.981	0.952	0.435	6e-75
P51105	366	Dihydroflavonol-4-reducta	N/A	no	0.972	0.868	0.430	2e-74
P14720	380	Dihydroflavonol-4-reducta	N/A	no	0.960	0.826	0.435	1e-73
P51108	357	Dihydroflavonol-4-reducta	N/A	no	0.969	0.887	0.451	2e-73
P51104	360	Dihydroflavonol-4-reducta	N/A	no	0.969	0.880	0.423	5e-73
P51103	364	Dihydroflavonol-4-reducta	N/A	no	0.981	0.881	0.449	1e-72

>sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2

 Score =  298 bits (762), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 152/332 (45%), Positives = 213/332 (64%), Gaps = 12/332 (3%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           M  QK  VCVTG +GFIGSWL+MRLL+ GYFV  TVR DP + K +  L +LP A   L 
Sbjct: 1   MVSQKETVCVTGASGFIGSWLVMRLLERGYFVRATVR-DPGNLKKVQHLLDLPNAKTLLT 59

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           ++ ADL++  S+D AI GC GV HVA P+D + K+ E  + +  VNG +GI+K+C+K+ T
Sbjct: 60  LWKADLSEEGSYDDAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKT 119

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           V+RFV+TSS  TV       ++ DE  WSD ++I    + G  Y ++KTL E+AA +FAE
Sbjct: 120 VRRFVFTSSAGTVNVEEHQKNVYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAE 179

Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI 240
           E GLD +++IP+ VVGPFI      S+ + L+ +  N   YSI+     VH+DD+  AHI
Sbjct: 180 EKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNEAHYSIIRQGQYVHLDDLCNAHI 239

Query: 241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNV-----DSLSEIEGYKLSALS 295
           FL E   AKGRYICSS   TI  +++FL  K+PEY +P+      ++L  IE       S
Sbjct: 240 FLYEQAAAKGRYICSSHDATILTISKFLRPKYPEYNVPSTFEGVDENLKSIE------FS 293

Query: 296 SKKLLDICFTYKYGIDEMFDGAIKCCKERGYL 327
           SKKL D+ F +KY ++EMF  +I+ C+++G+L
Sbjct: 294 SKKLTDMGFNFKYSLEEMFIESIETCRQKGFL 325

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 1EC: 9

>sp|P51106|DFRA_HORVU Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1

 Score =  295 bits (755), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 147/332 (44%), Positives = 209/332 (62%), Gaps = 12/332 (3%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           M+  KG V VTG +GF+GSWL+M+LL  GY V  TVR DP + +    L  LPGA ERL 
Sbjct: 1   MDGNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVR-DPANVEKTKPLLELPGAKERLS 59

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           I+ ADL++  SF+ AIAGC GV HVA P+D D ++ E  + +  V G + I+++C ++GT
Sbjct: 60  IWKADLSEDGSFNEAIAGCTGVFHVATPMDFDSQDPENEVIKPTVEGMLSIMRACKEAGT 119

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           VKR V+TSS  +V    +     D+  WSD DY R++ + G  Y ++K L E+AA+E+A 
Sbjct: 120 VKRIVFTSSAGSVNIEERPRPAYDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYAS 179

Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI 240
           E+GLD +++IP+ VVGPF+      S+ + LA++ GN   YSIL  + +VH+DD+  A  
Sbjct: 180 ENGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGNEAHYSILKQVQLVHLDDLCDAMT 239

Query: 241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNV-----DSLSEIEGYKLSALS 295
           FL E+P+A GRYICSS   TI  +A  L  + PEY IP       D+L  I        S
Sbjct: 240 FLFEHPEANGRYICSSHDATIHGLARMLQDRFPEYDIPQKFAGVDDNLQPIH------FS 293

Query: 296 SKKLLDICFTYKYGIDEMFDGAIKCCKERGYL 327
           SKKLLD  F+++Y  ++MFD AI  C+++G +
Sbjct: 294 SKKLLDHGFSFRYTTEDMFDAAIHTCRDKGLI 325

Hordeum vulgare (taxid: 4513)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1

 Score =  288 bits (736), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 142/332 (42%), Positives = 209/332 (62%), Gaps = 12/332 (3%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           M  +   VCVTG +GFIGSWL+MRLL+HGY V  TVR DP ++K +  L +LP A   L 
Sbjct: 1   MGSESESVCVTGASGFIGSWLVMRLLEHGYTVRATVR-DPTNQKKVKHLLDLPKAETHLT 59

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           ++ ADL D  SFD AI GC+GV HVA P+D + K+ E  + +  +NG + ILK+C K+ T
Sbjct: 60  LWKADLADEGSFDEAIQGCSGVFHVATPMDFESKDPENEVIKPTINGLLDILKACQKAKT 119

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           V++ V+TSS  TV        + DE+ WSD ++ R + + G  Y ++KTL E+AA ++A+
Sbjct: 120 VRKLVFTSSAGTVNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAK 179

Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI 240
           E+ +D +T+IP+ V+GPF+ P    S+ + L+ +L N   Y I+     VH+DD+  +HI
Sbjct: 180 ENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHI 239

Query: 241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNV-----DSLSEIEGYKLSALS 295
           +L E+P A+GRYICSS   TI E+ + L  K+PEY IP       D+L  +        S
Sbjct: 240 YLYEHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFKGIDDNLEPVH------FS 293

Query: 296 SKKLLDICFTYKYGIDEMFDGAIKCCKERGYL 327
           SKKL +I F +KY +++MF GA+  C+ +G +
Sbjct: 294 SKKLREIGFEFKYSLEDMFVGAVDACRAKGLI 325

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1

 Score =  285 bits (729), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 140/332 (42%), Positives = 209/332 (62%), Gaps = 12/332 (3%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           M  +   VCVTG +GFIGSWL+MRLL+HGY V  TVR DP ++K +  L +LP A   L 
Sbjct: 1   MGSESESVCVTGASGFIGSWLVMRLLEHGYTVRATVR-DPTNQKKVKHLLDLPKAETHLT 59

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           ++ ADL D  SFD AI GC+GV HVA P+D + ++ E  + +  +NG + ILK+C K+ T
Sbjct: 60  LWKADLADEGSFDEAIQGCSGVFHVATPMDFESRDPENEVIKPTINGLLDILKACQKAKT 119

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           V++ V+TSS  TV        + DE+ WSD ++ R + + G  Y ++KTL E+AA ++A+
Sbjct: 120 VRKLVFTSSAGTVNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAK 179

Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI 240
           E+ +D +T+IP+ V+GPF+ P    S+ + L+ +L N   Y I+     VH+DD+  +HI
Sbjct: 180 ENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHI 239

Query: 241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNV-----DSLSEIEGYKLSALS 295
           +L ++P A+GRYICSS   TI E+ + L  K+PEY IP       D+L  +        S
Sbjct: 240 YLYKHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFKGIDDNLEPVH------FS 293

Query: 296 SKKLLDICFTYKYGIDEMFDGAIKCCKERGYL 327
           SKKL +I F +KY +++MF GA+  C+ +G +
Sbjct: 294 SKKLREIGFEFKYSLEDMFVGAVDACRAKGLI 325

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Pyrus communis (taxid: 23211)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1

 Score =  281 bits (718), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 144/331 (43%), Positives = 201/331 (60%), Gaps = 10/331 (3%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           M  Q   VCVTG +GFIGSWL+MRLL+    V  TVR DP + K +  L +LP A   L 
Sbjct: 1   MGSQSETVCVTGASGFIGSWLVMRLLERRLTVRATVR-DPTNVKKVKHLLDLPKAETHLT 59

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           ++ ADL D  SFD AI GC GV HVA P+D + K+ E  + +  + G +GI+KSC  + T
Sbjct: 60  LWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKT 119

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           V+R V+TSS  TV      + + DE+ WSD ++ R   +    Y ++KTL E+AA ++A+
Sbjct: 120 VRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAK 179

Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI 240
           E+ +D +T+IP+ VVGPFI      S+ + L+ + GN   YSI+     VH+DD+  AHI
Sbjct: 180 ENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHI 239

Query: 241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPN----VDSLSEIEGYKLSALSS 296
           +L E P A+GRYICSS    I ++A+ L  K+PEY IP     VD     E  K    SS
Sbjct: 240 YLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVD-----ENLKSVCFSS 294

Query: 297 KKLLDICFTYKYGIDEMFDGAIKCCKERGYL 327
           KKL D+ F +KY +++MF GA+  C+ +G L
Sbjct: 295 KKLTDLGFEFKYSLEDMFTGAVDTCRAKGLL 325

Vitis vinifera (taxid: 29760)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51105|DFRA_GERHY Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1

 Score =  279 bits (713), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 143/332 (43%), Positives = 204/332 (61%), Gaps = 14/332 (4%)

Query: 2   EEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQI 61
           E+    VCVTG  GFIGSWL+MRLL+ GY V  TVR DP   K +  L  LP A   L++
Sbjct: 3   EDSPATVCVTGAAGFIGSWLVMRLLERGYVVHATVR-DPGDLKKVKHLLELPKAQTNLKL 61

Query: 62  FNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTV 121
           + ADL    SFD AI GC GV H+A P+D + K+ E  + +  + G + I++SC+K+ TV
Sbjct: 62  WKADLTQEGSFDEAIQGCHGVFHLATPMDFESKDPENEIIKPTIEGVLSIIRSCVKAKTV 121

Query: 122 KRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYI--RKLDIWGKSYVLTKTLTERAALEFA 179
           K+ V+TSS  TV    K + + DE+ WSD D+I  +K+  W   Y ++KTL E+AA +  
Sbjct: 122 KKLVFTSSAGTVNGQEKQLHVYDESHWSDLDFIYSKKMTAW--MYFVSKTLAEKAAWDAT 179

Query: 180 EEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAH 239
           + + +  +++IP+ VVGPFI   F  S+ + L+++ GN   YSI+     VH+DD+   H
Sbjct: 180 KGNNISFISIIPTLVVGPFITSTFPPSLVTALSLITGNEAHYSIIKQGQYVHLDDLCECH 239

Query: 240 IFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPN----VDSLSEIEGYKLSALS 295
           I+L E P AKGRYICSS   TI ++A+ +  K PEY IP     +D     E   + + S
Sbjct: 240 IYLYENPKAKGRYICSSHDATIHQLAKIIKDKWPEYYIPTKFPGID-----EELPIVSFS 294

Query: 296 SKKLLDICFTYKYGIDEMFDGAIKCCKERGYL 327
           SKKL+D  F +KY +++MF GAI  C+E+G L
Sbjct: 295 SKKLIDTGFEFKYNLEDMFKGAIDTCREKGLL 326

Gerbera hybrida (taxid: 18101)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P14720|DFRA_PETHY Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2

 Score =  276 bits (706), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 141/324 (43%), Positives = 199/324 (61%), Gaps = 10/324 (3%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           VCVTG  GFIGSWL+MRLL+ GY V  TVR DPE+KK +  L  LP A   L ++ ADL 
Sbjct: 18  VCVTGAAGFIGSWLVMRLLERGYNVHATVR-DPENKKKVKHLLELPKADTNLTLWKADLT 76

Query: 68  DPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYT 127
              SFD AI GC GV HVA P+D + K+ E  + +  V G + I++SC K+ TVKR V+T
Sbjct: 77  VEGSFDEAIQGCQGVFHVATPMDFESKDPENEVIKPTVRGMLSIIESCAKANTVKRLVFT 136

Query: 128 SSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLV 187
           SS  T+    +     D+T WSD D+I    + G  Y  +K L E+AA+E A++  +D +
Sbjct: 137 SSAGTLDVQEQQKLFYDQTSWSDLDFIYAKKMTGWMYFASKILAEKAAMEEAKKKNIDFI 196

Query: 188 TLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD 247
           ++IP  VVGPFI P F  S+ + L+++ GN   Y I+     VH+DD+  AHIFL E+P 
Sbjct: 197 SIIPPLVVGPFITPTFPPSLITALSLITGNEAHYCIIKQGQYVHLDDLCEAHIFLYEHPK 256

Query: 248 AKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEG----YKLSALSSKKLLDIC 303
           A GR+ICSS    I ++A+ +  K PEY +P     +E +G      + + SSKKL D+ 
Sbjct: 257 ADGRFICSSHHAIIYDVAKMVREKWPEYYVP-----TEFKGIDKDLPVVSFSSKKLTDMG 311

Query: 304 FTYKYGIDEMFDGAIKCCKERGYL 327
           F +KY +++M+ GAI  C+++  L
Sbjct: 312 FQFKYTLEDMYKGAIDTCRQKQLL 335

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51108|DFRA_MAIZE Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1

 Score =  276 bits (706), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 149/330 (45%), Positives = 209/330 (63%), Gaps = 13/330 (3%)

Query: 4   QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
           +KG V VTG +GF+GSWL+M+LL  GY V  TVR DP +      L +LPGA+ERL I+ 
Sbjct: 9   EKGTVLVTGASGFVGSWLVMKLLQAGYTVRATVR-DPANVGKTKPLMDLPGATERLSIWK 67

Query: 64  ADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKR 123
           ADL +  SF  AI GC GV HVA P+D   K+ E  + +  V G I I+++C ++GTV+R
Sbjct: 68  ADLAEEGSFHDAIRGCTGVFHVATPMDFLSKDPENEVIKPTVEGMISIMRACKEAGTVRR 127

Query: 124 FVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG 183
            V+TSS  TV    +   + DE  W+D D+ R++ + G  Y ++KTL E+AAL +A EHG
Sbjct: 128 IVFTSSAGTVNLEERQRPVYDEESWTDVDFCRRVKMTGWMYFVSKTLAEKAALAYAAEHG 187

Query: 184 LDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLL 243
           LDLVT+IP+ VVGPFI      S+ + LA++ GN   YSIL  + ++H+DD+  A IFL 
Sbjct: 188 LDLVTIIPTLVVGPFISASMPPSLITALALITGNAPHYSILKQVQLIHLDDLCDAEIFLF 247

Query: 244 EYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPN-----VDSLSEIEGYKLSALSSKK 298
           E P A GRY+CSS  +TI  +A  L  ++PEY +P       D L  +        SSKK
Sbjct: 248 ENPAAAGRYVCSSHDVTIHGLAAMLRDRYPEYDVPQRFPGIQDDLQPVR------FSSKK 301

Query: 299 LLDICFTYKYG-IDEMFDGAIKCCKERGYL 327
           L D+ FT++Y  +++MFD AI+ C+E+G +
Sbjct: 302 LQDLGFTFRYKTLEDMFDAAIRTCQEKGLI 331

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1

 Score =  274 bits (701), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 139/328 (42%), Positives = 204/328 (62%), Gaps = 11/328 (3%)

Query: 4   QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
           Q   VCVTG +GFIGSWLIMRLL+ GY V  TVR DP++ K +  L +LP A   L ++ 
Sbjct: 21  QGETVCVTGASGFIGSWLIMRLLERGYTVRATVR-DPDNTKKVQHLLDLPNAKTNLTLWK 79

Query: 64  ADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKR 123
           ADL++  SFDAA+ GC GV H+A P+D + K+ E  M +  +NG + ILKSC+K+  ++R
Sbjct: 80  ADLHEEGSFDAAVDGCTGVFHIATPMDFESKDPENEMIKPTINGMLDILKSCVKA-KLRR 138

Query: 124 FVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG 183
            V+TSSG TV        + DET WS  D+IR + + G  Y ++K L E+AA ++A E+ 
Sbjct: 139 VVFTSSGGTVNVEATQKPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKYAAENN 198

Query: 184 LDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLL 243
           L+ +++IP  VVGPFI P    S+ + L+ +      Y+I+     VH+DD+  +HIFL 
Sbjct: 199 LEFISIIPPLVVGPFIMPSMPPSLITALSPITRTESHYTIIKQGQFVHLDDLCMSHIFLY 258

Query: 244 EYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYK----LSALSSKKL 299
           E P A GRYI S+   TI ++A+ L  ++PEY +P     ++ + YK        SSKKL
Sbjct: 259 ENPKANGRYIASACAATIYDIAKMLREEYPEYNVP-----TKFKDYKEDMGQVQFSSKKL 313

Query: 300 LDICFTYKYGIDEMFDGAIKCCKERGYL 327
            D+ F +KYG+ +M+  A++ C+ +G L
Sbjct: 314 TDLGFEFKYGLKDMYTAAVESCRAKGLL 341

Dianthus caryophyllus (taxid: 3570)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51103|DFRA_CALCH Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1

 Score =  273 bits (698), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 148/329 (44%), Positives = 204/329 (62%), Gaps = 8/329 (2%)

Query: 2   EEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQI 61
           E+    VCVTG  GFIGSWL+MRLL+ GY V  TVR +P   K +  L  LP A   L +
Sbjct: 3   EDSPPTVCVTGAAGFIGSWLVMRLLERGYIVRATVR-NPGDMKKVKHLLELPKAETNLTL 61

Query: 62  FNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTV 121
           + ADL    SFD AI GC GV HVA P+D + K+ E  + +  + G + I++SC K+ TV
Sbjct: 62  WKADLTQEGSFDEAIEGCHGVFHVATPMDFESKDPENEIIKPTIEGILSIIRSCAKAKTV 121

Query: 122 KRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYI--RKLDIWGKSYVLTKTLTERAALEFA 179
           K+ VYTSS  TV      + + DE+ WSD D+I  +K+  W   Y ++KTL E+AA+E A
Sbjct: 122 KKLVYTSSAGTVNVQETQLPVYDESHWSDLDFIYSKKMTAW--MYFVSKTLAEKAAMEAA 179

Query: 180 EEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAH 239
           +E+ +D V++IP  VVGPFI P F  S+ + L+++ G    YSI+     VH+DD+   H
Sbjct: 180 KENNIDFVSIIPPLVVGPFINPTFPPSLITALSLINGAESHYSIIKQGQYVHLDDLCECH 239

Query: 240 IFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEI-EGYKLSALSSKK 298
           IFL E P+AKGRYICS    TI ++A  +  K PEY +P     + I E     + SSKK
Sbjct: 240 IFLYENPEAKGRYICSKQDATIHQLARMIKQKWPEYHVPT--QFAGIDEELPTVSFSSKK 297

Query: 299 LLDICFTYKYGIDEMFDGAIKCCKERGYL 327
           L+D+ F +KY +++MF GAI  CKE+G+L
Sbjct: 298 LIDMGFKFKYDLEDMFKGAIDSCKEKGFL 326

Callistephus chinensis (taxid: 13379)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
147769574	327	hypothetical protein VITISV_025424 [Viti	1.0	1.0	0.657	1e-131
225453897	327	PREDICTED: dihydroflavonol-4-reductase [	1.0	1.0	0.657	1e-130
225453895	327	PREDICTED: dihydroflavonol-4-reductase [	1.0	1.0	0.645	1e-130
224063846	327	predicted protein [Populus trichocarpa]	1.0	1.0	0.651	1e-128
296089142	665	unnamed protein product [Vitis vinifera]	1.0	0.491	0.663	1e-128
225453889	335	PREDICTED: dihydroflavonol-4-reductase i	1.0	0.976	0.663	1e-128
225453893	351	PREDICTED: dihydroflavonol-4-reductase-l	0.996	0.928	0.634	1e-124
255570805	326	cinnamoyl-CoA reductase, putative [Ricin	0.993	0.996	0.634	1e-121
224087435	328	predicted protein [Populus trichocarpa]	1.0	0.996	0.628	1e-121
255541306	343	cinnamoyl-CoA reductase, putative [Ricin	0.993	0.947	0.615	1e-121

>gi|147769574|emb|CAN76937.1| hypothetical protein VITISV_025424 [Vitis vinifera]

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 215/327 (65%), Positives = 271/327 (82%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           ME +KG+VCVTGGTGFI SWL+M+LL HGY V  T+RS P+ KKD+S+LTNLPGASE+L+
Sbjct: 1   MEGEKGRVCVTGGTGFIASWLVMKLLQHGYSVNATIRSHPQSKKDVSYLTNLPGASEKLR 60

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           I+NADL+DP SF+AAI GC GV HVA P+D +  E EE +T+R+V GT+GILK+CL S T
Sbjct: 61  IYNADLSDPSSFEAAIEGCNGVFHVAHPVDFEDTEPEETVTKRSVEGTLGILKACLNSKT 120

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           VKR VYTSS S V ++ K  ++ DE+ WSD D+++ L+ WG SY+++KT TERAAL+FA 
Sbjct: 121 VKRVVYTSSSSAVEYNDKGGNIKDESSWSDVDFLKALNYWGXSYMISKTXTERAALDFAH 180

Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI 240
           EHGLDLVT+IPSFVVGPFICP+F GSV + LA+VLG++++Y IL+NISMVH+DD   AHI
Sbjct: 181 EHGLDLVTVIPSFVVGPFICPRFPGSVNTALALVLGDQQQYHILMNISMVHVDDACSAHI 240

Query: 241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLL 300
           FLLEYPDAKGRYICSS +LT+ EM+EFLSAK+P+ PIP +DSL E+ GY +  +SSKKLL
Sbjct: 241 FLLEYPDAKGRYICSSDRLTLNEMSEFLSAKYPQLPIPTIDSLKEVRGYGIPGVSSKKLL 300

Query: 301 DICFTYKYGIDEMFDGAIKCCKERGYL 327
           D  F YKYG+DEMFD AI+CCKE+G+L
Sbjct: 301 DTGFKYKYGLDEMFDEAIQCCKEKGFL 327

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453897|ref|XP_002278913.1| PREDICTED: dihydroflavonol-4-reductase [Vitis vinifera] gi|296089144|emb|CBI38847.3| unnamed protein product [Vitis vinifera]

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 215/327 (65%), Positives = 271/327 (82%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           ME +KG+VCVTGGTGFI SWL+M+LL HGY V  T+RS P+ KKD+S+LTNLPGASE+L+
Sbjct: 1   MEGEKGRVCVTGGTGFIASWLVMKLLQHGYSVNATIRSHPQSKKDVSYLTNLPGASEKLR 60

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           I+NADL+DP SF+AAI GC GV HVA PID +  E EE +T+R+V GT+GILK+CL S T
Sbjct: 61  IYNADLSDPSSFEAAIEGCIGVFHVAHPIDFEDTEPEETVTKRSVEGTLGILKACLNSKT 120

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           VKR VYTSS S V ++ K  D+ DE+ WSD D+++ L+ WG SY+++KT+TERAAL+FA 
Sbjct: 121 VKRVVYTSSTSAVEYNDKGGDIKDESSWSDVDFLKALNYWGLSYMISKTMTERAALDFAH 180

Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI 240
           EHGLDLVT+IPSFVVGPFICP+F GSV + LA+VLG+++ Y  L+++SMVH+DDV  AHI
Sbjct: 181 EHGLDLVTVIPSFVVGPFICPRFPGSVNAALALVLGDQQHYHFLMSVSMVHVDDVCSAHI 240

Query: 241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLL 300
           FLLEYPDAKGRYICSS +LT+ EM+EFLSAK+P+ PIP +DSL E++GY    +SSKKLL
Sbjct: 241 FLLEYPDAKGRYICSSDRLTLNEMSEFLSAKYPQLPIPTIDSLKEVQGYGTPGVSSKKLL 300

Query: 301 DICFTYKYGIDEMFDGAIKCCKERGYL 327
           D  F YKYG+DEMFD AI+CCKE+G+L
Sbjct: 301 DTGFKYKYGLDEMFDEAIQCCKEKGFL 327

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453895|ref|XP_002278887.1| PREDICTED: dihydroflavonol-4-reductase [Vitis vinifera] gi|296089143|emb|CBI38846.3| unnamed protein product [Vitis vinifera]

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 211/327 (64%), Positives = 272/327 (83%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           ME +KG+VCVTGGTGFI SWL+M+LL HGY V  T+RS P+ KKD+S+LTNLPGASE+L+
Sbjct: 1   MEGEKGRVCVTGGTGFIASWLVMKLLQHGYSVNATIRSHPQSKKDVSYLTNLPGASEKLR 60

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           I+NADL+DP SF+AAI GC GV HVA P+D +  E EE +T+R+V GT+GILK+CL S T
Sbjct: 61  IYNADLSDPSSFEAAIEGCIGVFHVAHPVDFEDTEPEETVTKRSVEGTLGILKACLNSKT 120

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           VKR VYTSS + V  + K  D+ DE+ W+D D+++ L+ WG+SY+++KT+TER+AL+FA+
Sbjct: 121 VKRVVYTSSTAAVVLNDKGGDIKDESSWTDVDFLKALNYWGQSYMISKTITERSALDFAQ 180

Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI 240
           EHGLDLVT+ PSFVVGPFICP+F GSV + LA+VLG++++Y +L+NISMVH+DDV  AHI
Sbjct: 181 EHGLDLVTVTPSFVVGPFICPRFPGSVNTALALVLGDQQQYHVLMNISMVHVDDVCSAHI 240

Query: 241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLL 300
           FLLE PDAKGRYICSS +LT+ EM+EFLSAK+P+ PIP +DSL E++GY    +SSKKLL
Sbjct: 241 FLLECPDAKGRYICSSDRLTLNEMSEFLSAKYPQLPIPTIDSLKEVQGYGTPGVSSKKLL 300

Query: 301 DICFTYKYGIDEMFDGAIKCCKERGYL 327
           D  F YKYG+DEMFD AI+CCKE+G+L
Sbjct: 301 DTGFKYKYGLDEMFDEAIQCCKEKGFL 327

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063846|ref|XP_002301290.1| predicted protein [Populus trichocarpa] gi|222843016|gb|EEE80563.1| predicted protein [Populus trichocarpa]

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 213/327 (65%), Positives = 272/327 (83%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           ME  KGKVCVTGGTGF+ SWLIMRLL+HGY V TT+R DPEHK+D+SFLT+LP ASE+LQ
Sbjct: 1   MEGDKGKVCVTGGTGFLASWLIMRLLEHGYSVHTTIRPDPEHKRDVSFLTSLPEASEKLQ 60

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           IF ADL+DP SF+ AI GC GV HVA P+D + KE EEV+ QRA++GT+GILK+CL S T
Sbjct: 61  IFQADLSDPNSFEVAIKGCIGVFHVATPVDFESKEPEEVVVQRAIDGTLGILKACLNSMT 120

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           VKR VYTSSG+ V F+  DVD +DE++W+D +Y++ L  +   Y ++KTLTE+ ALEFA+
Sbjct: 121 VKRVVYTSSGAAVVFNDSDVDTMDESYWTDVEYVKALKSFAGPYFISKTLTEKRALEFAD 180

Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI 240
           EHG DLV++IPSF+ GPFIC KF GSV ++LAMVLG +++Y  LLN+SMVH+DDVARAHI
Sbjct: 181 EHGFDLVSIIPSFINGPFICSKFPGSVHTSLAMVLGEQQKYGTLLNMSMVHVDDVARAHI 240

Query: 241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLL 300
           FL E+PDAKGR ICSS  +TI++M++FLS+K+PE P+P+++SL EIEG +L+ LSSKKLL
Sbjct: 241 FLFEHPDAKGRNICSSHTITIEKMSKFLSSKYPECPLPSLESLKEIEGTRLAGLSSKKLL 300

Query: 301 DICFTYKYGIDEMFDGAIKCCKERGYL 327
           D+ F +K G+DEMFDGAI+ CKE+GYL
Sbjct: 301 DLGFKFKCGLDEMFDGAIQSCKEKGYL 327

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089142|emb|CBI38845.3| unnamed protein product [Vitis vinifera]

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 217/327 (66%), Positives = 261/327 (79%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           ME +KGKVCVTGGTGFI SWLIM+LL HGY V  T+RS P+ KKD+ +LTNLPGASERLQ
Sbjct: 1   MEGEKGKVCVTGGTGFIASWLIMKLLQHGYSVNATIRSHPQIKKDIRYLTNLPGASERLQ 60

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           IF ADL++P+SFDAAI GC GV HVA P+D +  E +E + +R+V GT+GILK CLKS T
Sbjct: 61  IFKADLSEPQSFDAAIEGCIGVFHVAHPVDFEEGEPQETVIRRSVEGTLGILKGCLKSKT 120

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           VKR VYTSS + V ++ KD D++DE+ WSD D I  +   G SYV++KT  ERAALEFAE
Sbjct: 121 VKRVVYTSSTAAVVYNNKDEDIMDESSWSDIDVINSIKPLGSSYVISKTRIERAALEFAE 180

Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI 240
           +HGLDLV+LIPSFVVGPFICP F GSV   LAM+LGN+  Y  L N SMVH+DDVA AHI
Sbjct: 181 QHGLDLVSLIPSFVVGPFICPGFPGSVHLILAMILGNQHHYQYLKNTSMVHVDDVASAHI 240

Query: 241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLL 300
           FLLEYPDAKGRYICSS  LT+ EM+E LSAK+P+ PIP +DSL EI+G+++   SSKKLL
Sbjct: 241 FLLEYPDAKGRYICSSDILTLNEMSELLSAKYPQLPIPTIDSLKEIQGFRIPGASSKKLL 300

Query: 301 DICFTYKYGIDEMFDGAIKCCKERGYL 327
           D  F YKYG+DEMF+ AI+CCKE+G+L
Sbjct: 301 DAGFKYKYGVDEMFEEAIQCCKEKGFL 327

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453889|ref|XP_002278819.1| PREDICTED: dihydroflavonol-4-reductase isoform 1 [Vitis vinifera]

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 217/327 (66%), Positives = 261/327 (79%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           ME +KGKVCVTGGTGFI SWLIM+LL HGY V  T+RS P+ KKD+ +LTNLPGASERLQ
Sbjct: 1   MEGEKGKVCVTGGTGFIASWLIMKLLQHGYSVNATIRSHPQIKKDIRYLTNLPGASERLQ 60

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           IF ADL++P+SFDAAI GC GV HVA P+D +  E +E + +R+V GT+GILK CLKS T
Sbjct: 61  IFKADLSEPQSFDAAIEGCIGVFHVAHPVDFEEGEPQETVIRRSVEGTLGILKGCLKSKT 120

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           VKR VYTSS + V ++ KD D++DE+ WSD D I  +   G SYV++KT  ERAALEFAE
Sbjct: 121 VKRVVYTSSTAAVVYNNKDEDIMDESSWSDIDVINSIKPLGSSYVISKTRIERAALEFAE 180

Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI 240
           +HGLDLV+LIPSFVVGPFICP F GSV   LAM+LGN+  Y  L N SMVH+DDVA AHI
Sbjct: 181 QHGLDLVSLIPSFVVGPFICPGFPGSVHLILAMILGNQHHYQYLKNTSMVHVDDVASAHI 240

Query: 241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLL 300
           FLLEYPDAKGRYICSS  LT+ EM+E LSAK+P+ PIP +DSL EI+G+++   SSKKLL
Sbjct: 241 FLLEYPDAKGRYICSSDILTLNEMSELLSAKYPQLPIPTIDSLKEIQGFRIPGASSKKLL 300

Query: 301 DICFTYKYGIDEMFDGAIKCCKERGYL 327
           D  F YKYG+DEMF+ AI+CCKE+G+L
Sbjct: 301 DAGFKYKYGVDEMFEEAIQCCKEKGFL 327

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453893|ref|XP_002278874.1| PREDICTED: dihydroflavonol-4-reductase-like [Vitis vinifera]

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 207/326 (63%), Positives = 260/326 (79%)

Query: 2   EEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQI 61
           E +KG+VCVTGGTGFI SWLIM+LL HGY V  T+RS P  KKD+S++TNLPGASE+LQI
Sbjct: 26  ENEKGRVCVTGGTGFIASWLIMKLLQHGYSVNATIRSHPGSKKDISYITNLPGASEKLQI 85

Query: 62  FNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTV 121
           FNADL++P SF+ A+ GC GV HVA P+D + +E EE +T+R+V GT+ ILK+CL S TV
Sbjct: 86  FNADLSEPHSFEPALEGCIGVFHVAHPVDFEAREPEETVTRRSVEGTLAILKACLNSKTV 145

Query: 122 KRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE 181
           KR VYTSS S V F+ KD DM DE+ WSD ++IR L  +   Y+++KT TERAALEFAE+
Sbjct: 146 KRVVYTSSASAVVFNDKDEDMKDESSWSDVEFIRSLGSFAGPYMISKTETERAALEFAEK 205

Query: 182 HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIF 241
           HGLDLVTL+PSFVVGPF+CP   GSV+  L M+ G +++Y  L+N SMVH+DDVA AHIF
Sbjct: 206 HGLDLVTLLPSFVVGPFLCPFLPGSVQMALTMIKGIQDQYQNLMNTSMVHVDDVASAHIF 265

Query: 242 LLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLD 301
           LL YP+AKGRY CSS  +TI EM+EFLSAK+P+ PIP  +SLS I+GY+   LSSKKLLD
Sbjct: 266 LLHYPNAKGRYNCSSNTITINEMSEFLSAKYPQLPIPTTESLSGIQGYRTPGLSSKKLLD 325

Query: 302 ICFTYKYGIDEMFDGAIKCCKERGYL 327
             F +K+G+DEMFDGA++CCKE+G+L
Sbjct: 326 TGFVFKHGLDEMFDGAVQCCKEKGFL 351

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255570805|ref|XP_002526355.1| cinnamoyl-CoA reductase, putative [Ricinus communis] gi|223534314|gb|EEF36026.1| cinnamoyl-CoA reductase, putative [Ricinus communis]

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/328 (63%), Positives = 265/328 (80%), Gaps = 3/328 (0%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           MEE K  V VTGGTG++ SWLIMRLLDHGY V TT+R DPE K+D++FLT+LPGAS++L+
Sbjct: 1   MEENK--VAVTGGTGYVASWLIMRLLDHGYSVHTTIRPDPEQKRDITFLTSLPGASDKLK 58

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDID-GKETEEVMTQRAVNGTIGILKSCLKSG 119
           IF+ADL+DP SFD AI GC GV HVA P      +E EEV+T++A++GTIGILK CL S 
Sbjct: 59  IFHADLSDPNSFDDAIKGCIGVFHVATPTPGHYTEEPEEVVTRKAIDGTIGILKVCLNSK 118

Query: 120 TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFA 179
           TVKR VYTSS S V F+ K+  ++DE+FWSD DYI+ L+ +   Y ++KTL E+ ALEFA
Sbjct: 119 TVKRVVYTSSTSAVDFNDKNAQVMDESFWSDVDYIKALNSFASPYWVSKTLAEKKALEFA 178

Query: 180 EEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAH 239
           EEHGLDLVT+IPSFVVGPFICP    SV + LAM+ G  + Y++L N SMVH+DD+ARAH
Sbjct: 179 EEHGLDLVTVIPSFVVGPFICPNLPASVEAALAMIFGKSDLYNLLRNTSMVHVDDLARAH 238

Query: 240 IFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL 299
           IFL E+P+AKGR+ICSS ++TI+EM++FLSAK+P++PIP VDSL +IEG++  ALSSKKL
Sbjct: 239 IFLFEHPNAKGRHICSSDRITIEEMSKFLSAKYPQFPIPTVDSLKDIEGFQGPALSSKKL 298

Query: 300 LDICFTYKYGIDEMFDGAIKCCKERGYL 327
           LD  F + YG+DEMFDGAI+CCKE+G++
Sbjct: 299 LDYGFKFMYGLDEMFDGAIQCCKEKGHI 326

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087435|ref|XP_002308165.1| predicted protein [Populus trichocarpa] gi|222854141|gb|EEE91688.1| predicted protein [Populus trichocarpa]

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/328 (62%), Positives = 261/328 (79%), Gaps = 1/328 (0%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           ME +KG+VCVTGGTGF+ SWLIM+LL+ GY V TTVR  PEHK+D+SFLT+LPG SERL+
Sbjct: 1   MEGEKGRVCVTGGTGFVASWLIMKLLEQGYSVNTTVRPHPEHKRDVSFLTSLPGGSERLE 60

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAP-IDIDGKETEEVMTQRAVNGTIGILKSCLKSG 119
           IF ADL++P  FD AI GC GV HVA+P +D    E EEV+ QRA +GT+GILK+CL S 
Sbjct: 61  IFYADLSEPSGFDVAIKGCIGVFHVASPTLDFGNGEPEEVVIQRATDGTLGILKACLNSK 120

Query: 120 TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFA 179
           TVKR V TSS S V F+G  V+M+DE +WSD DYI+  ++    Y ++KTLTE+ ALEFA
Sbjct: 121 TVKRVVLTSSASAVAFNGSGVEMMDEAYWSDVDYIKASNLPIGPYFISKTLTEKRALEFA 180

Query: 180 EEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAH 239
           +EHGLDLVTL P+++ GPFICP    SV  +LAMVLG+RE+Y +L+N  M+HIDDVARAH
Sbjct: 181 QEHGLDLVTLAPTYIHGPFICPNMPSSVHISLAMVLGDREQYGLLINAPMLHIDDVARAH 240

Query: 240 IFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL 299
           IFLLEYP+AKGRYICS   +TI+EM+EFLSAK+P+Y IP ++ L ++EG K+  LSSKKL
Sbjct: 241 IFLLEYPEAKGRYICSKDTITIEEMSEFLSAKYPDYSIPTLEYLKDVEGLKIPGLSSKKL 300

Query: 300 LDICFTYKYGIDEMFDGAIKCCKERGYL 327
           +D  F ++YG++EMFDGAI+CCKE+G L
Sbjct: 301 VDSGFKFRYGLEEMFDGAIQCCKEKGLL 328

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541306|ref|XP_002511717.1| cinnamoyl-CoA reductase, putative [Ricinus communis] gi|223548897|gb|EEF50386.1| cinnamoyl-CoA reductase, putative [Ricinus communis]

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 200/325 (61%), Positives = 265/325 (81%)

Query: 3   EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIF 62
           + K +  +TGGTGF+ SWL+MRLL+HGY V TT+R DPEHK+D+SFLT+LPGAS++LQIF
Sbjct: 19  QTKVQYVLTGGTGFLASWLVMRLLEHGYSVHTTIRPDPEHKRDVSFLTSLPGASKKLQIF 78

Query: 63  NADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVK 122
            ADL+DP+SF+AAI GC GV   A P+DI+ KE E+V+ +RA++G +GILK+CL S TVK
Sbjct: 79  EADLSDPDSFEAAIKGCIGVFLAATPVDIENKEPEKVIVKRALDGALGILKTCLNSKTVK 138

Query: 123 RFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH 182
           R VYTSS S V F+ K    +DE+FW+D +YI+ L     SY+++K LTE+ AL+FA+EH
Sbjct: 139 RVVYTSSASAVVFNDKVAHAMDESFWNDTNYIKSLMSPFASYLISKILTEKKALDFAQEH 198

Query: 183 GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFL 242
           GLDLVT++PSF+VGPF CPKF GSV ++ AM+LG +E+YS LLN+SMVH DDVARAHIFL
Sbjct: 199 GLDLVTVVPSFIVGPFNCPKFPGSVHTSFAMILGEKEQYSALLNMSMVHTDDVARAHIFL 258

Query: 243 LEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDI 302
           LE PDAKGRYICSS  +TI+E+++FLS K+PEYPIP +D+L +I+G+K + LSS+KLL +
Sbjct: 259 LENPDAKGRYICSSNTMTIEELSKFLSHKYPEYPIPTIDALQDIKGHKSARLSSQKLLKL 318

Query: 303 CFTYKYGIDEMFDGAIKCCKERGYL 327
            F +K+G DEMFD AI+ C+E+G+L
Sbjct: 319 GFKFKHGPDEMFDDAIQTCREKGHL 343

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
TAIR|locus:2050882	364	BEN1 [Arabidopsis thaliana (ta	0.990	0.890	0.516	6.6e-81
TAIR|locus:2165427	382	DFR "dihydroflavonol 4-reducta	0.993	0.850	0.443	1.1e-71
TAIR|locus:2122093	326	DRL1 "dihydroflavonol 4-reduct	0.969	0.972	0.422	7.6e-64
TAIR|locus:2195733	340	BAN "BANYULS" [Arabidopsis tha	0.957	0.920	0.374	1.7e-52
TAIR|locus:2201272	321	TKPR2 "tetraketide alpha-pyron	0.954	0.971	0.391	3.1e-51
TAIR|locus:2150315	326	AT5G19440 [Arabidopsis thalian	0.951	0.953	0.379	1.1e-48
TAIR|locus:2031255	320	AT1G25460 [Arabidopsis thalian	0.944	0.965	0.388	1.4e-48
TAIR|locus:2033904	325	AT1G51410 [Arabidopsis thalian	0.825	0.830	0.407	2.3e-48
TAIR|locus:2131734	354	AT4G27250 [Arabidopsis thalian	0.957	0.884	0.369	1.4e-46
TAIR|locus:2051018	321	CRL2 "CCR(Cinnamoyl coA:NADP o	0.816	0.831	0.414	7.9e-46

TAIR|locus:2050882 BEN1 [Arabidopsis thaliana (taxid:3702)]

 Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
 Identities = 171/331 (51%), Positives = 222/331 (67%)

Query:     3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE-HKKDLSFLTNLPGASERLQI 61
             ++ G VCVTGG+GF+ SWLIMRLL  GY V  TVR++ E +KKD+S+LT LP ASERLQI
Sbjct:    35 DETGLVCVTGGSGFVASWLIMRLLQRGYSVRATVRTNSEGNKKDISYLTELPFASERLQI 94

Query:    62 FNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTV 121
             F ADLN+PESF  AI GC  V HVA P+D +  ETEE +T+R V G +GILKSCL + TV
Sbjct:    95 FTADLNEPESFKPAIEGCKAVFHVAHPMDPNSNETEETVTKRTVQGLMGILKSCLDAKTV 154

Query:   122 KRFVYTSSGSTVYFSGKDVD---MLDETFWSDEDYIR--KLDIWGKSYVLTKTLTERAAL 176
             KRF YTSS  TV++SG +      +DE+ WSD +  R  K      SYV++K   E AAL
Sbjct:   155 KRFFYTSSAVTVFYSGGNGGGGGEVDESVWSDVEVFRNQKEKRVSSSYVVSKMAAETAAL 214

Query:   177 EFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVA 236
             EF  ++GL++VTL+   VVGPFI      SV  +LAM+ GN +E  +    +MVHIDDVA
Sbjct:   215 EFGGKNGLEVVTLVIPLVVGPFISSSLPSSVFISLAMLFGNYKEKYLFDTYNMVHIDDVA 274

Query:   237 RAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYXXXXXXX 296
             RA IFLLE P AKGRYICSS ++ I E+ EFLS K P++ +P++D L++ +         
Sbjct:   275 RAMIFLLEKPVAKGRYICSSVEMKIDEVFEFLSTKFPQFQLPSID-LNKYKVEKRMGLSS 333

Query:   297 XXXXDICFTYKYGIDEMFDGAIKCCKERGYL 327
                    F +KYG +E+F GAI+ C+ RG+L
Sbjct:   334 KKLKSAGFEFKYGAEEIFSGAIRSCQARGFL 364

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009813 "flavonoid biosynthetic process" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0010422 "regulation of brassinosteroid biosynthetic process" evidence=IMP

GO:0016131 "brassinosteroid metabolic process" evidence=IMP

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2165427 DFR "dihydroflavonol 4-reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
 Identities = 145/327 (44%), Positives = 205/327 (62%)

Query:     1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
             M  QK  VCVTG +GFIGSWL+MRLL+ GYFV  TVR DP + K +  L +LP A   L 
Sbjct:     1 MVSQKETVCVTGASGFIGSWLVMRLLERGYFVRATVR-DPGNLKKVQHLLDLPNAKTLLT 59

Query:    61 IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
             ++ ADL++  S+D AI GC GV HVA P+D + K+ E  + +  VNG +GI+K+C+K+ T
Sbjct:    60 LWKADLSEEGSYDDAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKT 119

Query:   121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
             V+RFV+TSS  TV       ++ DE  WSD ++I    + G  Y ++KTL E+AA +FAE
Sbjct:   120 VRRFVFTSSAGTVNVEEHQKNVYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAE 179

Query:   181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI 240
             E GLD +++IP+ VVGPFI      S+ + L+ +  N   YSI+     VH+DD+  AHI
Sbjct:   180 EKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNEAHYSIIRQGQYVHLDDLCNAHI 239

Query:   241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYXXXXXXXXXXX 300
             FL E   AKGRYICSS   TI  +++FL  K+PEY +P+     + E             
Sbjct:   240 FLYEQAAAKGRYICSSHDATILTISKFLRPKYPEYNVPSTFEGVD-ENLKSIEFSSKKLT 298

Query:   301 DICFTYKYGIDEMFDGAIKCCKERGYL 327
             D+ F +KY ++EMF  +I+ C+++G+L
Sbjct:   299 DMGFNFKYSLEEMFIESIETCRQKGFL 325

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0042406 "extrinsic to endoplasmic reticulum membrane" evidence=TAS

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA;IMP;TAS

GO:0045552 "dihydrokaempferol 4-reductase activity" evidence=IMP;TAS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

TAIR|locus:2122093 DRL1 "dihydroflavonol 4-reductase-like1" [Arabidopsis thaliana (taxid:3702)]

 Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
 Identities = 140/331 (42%), Positives = 202/331 (61%)

Query:     1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
             M++ KGKVCVTG +GF+ SWL+ RLL  GY V  TVR DP ++K L+ L  L GA ERL+
Sbjct:     1 MDQAKGKVCVTGASGFLASWLVKRLLLEGYEVIGTVR-DPGNEKKLAHLWKLEGAKERLR 59

Query:    61 IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
             +  ADL +  SFD AI GC GV H A+P+       EE + + A+ GT+ +L+SC K+ +
Sbjct:    60 LVKADLMEEGSFDNAIMGCQGVFHTASPVLKPTSNPEEEILRPAIEGTLNVLRSCRKNPS 119

Query:   121 VKRFVYTSSGSTVYFSGKDVDM---LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALE 177
             +KR V TSS STV     D D    LDE+ W+  +  ++  +W   Y L+KTL E+AA +
Sbjct:   120 LKRVVLTSSSSTVRIRD-DFDPKIPLDESIWTSVELCKRFQVW---YALSKTLAEQAAWK 175

Query:   178 FAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVAR 237
             F+EE+G+DLVT++PSF+VGP + P    +    L ++ G  E++     +  VHIDDVAR
Sbjct:   176 FSEENGIDLVTVLPSFLVGPSLPPDLCSTASDVLGLLKGETEKFQWHGQMGYVHIDDVAR 235

Query:   238 AHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPN-VDSLSEIEGYXXXXXXX 296
              HI + E+  A+GRYICSS  ++++E+  FLSA++P  PIP   + L+ +  Y       
Sbjct:   236 THIVVFEHEAAQGRYICSSNVISLEELVSFLSARYPSLPIPKRFEKLNRLH-YDFDTSKI 294

Query:   297 XXXXDICFTYKYGIDEMFDGAIKCCKERGYL 327
                  +   +K  ++EMFD  I    E+GYL
Sbjct:   295 QS---LGLKFK-SLEEMFDDCIASLVEQGYL 321

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009555 "pollen development" evidence=IMP

GO:0048316 "seed development" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010584 "pollen exine formation" evidence=IMP

GO:0080110 "sporopollenin biosynthetic process" evidence=IMP

TAIR|locus:2195733 BAN "BANYULS" [Arabidopsis thaliana (taxid:3702)]

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 125/334 (37%), Positives = 195/334 (58%)

Query:     7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
             K CV GGTG + S LI  LL  GY V TTVR DPE++K ++ L  L    + L+IF ADL
Sbjct:    12 KACVIGGTGNLASILIKHLLQSGYKVNTTVR-DPENEKKIAHLRKLQELGD-LKIFKADL 69

Query:    67 NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
              D +SF+++ +GC  + HVA PI+   ++ E+ M + A+ G I +LKSCLKS +VKR +Y
Sbjct:    70 TDEDSFESSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIY 129

Query:   127 TSSGSTVYF---SGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG 183
             TSS + V     SG  + M +E  W+D +++ +   +   Y ++K L E+ A EFA+E+ 
Sbjct:   130 TSSAAAVSINNLSGTGIVMNEEN-WTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENK 188

Query:   184 LDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGN-------REEYSILLNISMVHIDDVA 236
             ++LVT+IP+ + G  +      S+  +++ + G        +E   +  +IS VH+DD+A
Sbjct:   189 INLVTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSGSISFVHVDDLA 248

Query:   237 RAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYXXXXXXX 296
             RAH+FL E   A GRYIC +   ++ E+A+FL  ++P+Y   NV  LSE E         
Sbjct:   249 RAHLFLAEKETASGRYICCAYNTSVPEIADFLIQRYPKY---NV--LSEFEEGLSIPKLT 303

Query:   297 XXXXDIC---FTYKYGIDEMFDGAIKCCKERGYL 327
                  +    F ++YGI+EM+D  I+  + +G +
Sbjct:   304 LSSQKLINEGFRFEYGINEMYDQMIEYFESKGLI 337

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0033729 "anthocyanidin reductase activity" evidence=IDA

GO:0009964 "negative regulation of flavonoid biosynthetic process" evidence=IMP

GO:0016491 "oxidoreductase activity" evidence=ISS

TAIR|locus:2201272 TKPR2 "tetraketide alpha-pyrone reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 126/322 (39%), Positives = 175/322 (54%)

Query:    10 VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP 69
             VTGGTGFI S++I  LL+ G+ V TTVR+ P  ++ + FL    GA +RL+I  ADL   
Sbjct:     6 VTGGTGFIASYIIKSLLELGHTVRTTVRN-PRDEEKVGFLWEFQGAKQRLKILQADLTVE 64

Query:    70 ESFDAAIAGCAGVIHVAAPIDI-DGKETEEVMTQRAVNGTIGILKSCLKS-GTVKRFVYT 127
              SFD A+ G  GV H A+P+ +      +E +    + GT  ++ SC KS  T+KR V T
Sbjct:    65 GSFDEAVNGVDGVFHTASPVLVPQDHNIQETLVDPIIKGTTNVMSSCAKSKATLKRIVLT 124

Query:   128 SSGSTV-Y-FSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLD 185
             SS S++ Y F   +   L+E+ WSD +Y ++ ++W   Y   KTL ER A   AEE GLD
Sbjct:   125 SSCSSIRYRFDATEASPLNESHWSDPEYCKRFNLW---YGYAKTLGEREAWRIAEEKGLD 181

Query:   186 LVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEY 245
             LV + PSFVVGP + PK   ++   LA+  G   EY     +  VHIDDV  AH+  +E 
Sbjct:   182 LVVVNPSFVVGPLLGPKPTSTLLMILAIAKGLAGEYPNF-TVGFVHIDDVVAAHVLAMEE 240

Query:   246 PDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYXXXXXXXXXXXDICFT 305
             P A GR ICSS+     E+ E +  K+P YP  N  S  E +             ++ F 
Sbjct:   241 PKASGRIICSSSVAHWSEIIELMRNKYPNYPFENKCSNKEGDN-SPHSMDTRKIHELGFG 299

Query:   306 YKYGIDEMFDGAIKCCKERGYL 327
                 + EMFD  I   +++G L
Sbjct:   300 SFKSLPEMFDDCIISFQKKGLL 321

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0010584 "pollen exine formation" evidence=IMP

GO:0080110 "sporopollenin biosynthetic process" evidence=IMP

TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)]

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 125/329 (37%), Positives = 175/329 (53%)

Query:     5 KGKV-CVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
             +GKV CVTG +G+I SWL+  LL  GY V  +VR DP   K    L +L GA ERL +F 
Sbjct:     6 EGKVVCVTGASGYIASWLVKFLLSRGYTVKASVR-DPSDPKKTQHLVSLEGAKERLHLFK 64

Query:    64 ADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKR 123
             ADL +  SFD+AI GC GV H A+P   D K+ +  +   AV GT+ +L SC K+ +VKR
Sbjct:    65 ADLLEQGSFDSAIDGCHGVFHTASPFFNDAKDPQAELIDPAVKGTLNVLNSCAKASSVKR 124

Query:   124 FVYTSSGSTVYFSGK----DVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFA 179
              V TSS + V ++GK    DV + DET++SD +      +W   YVL+KTL E AA + A
Sbjct:   125 VVVTSSMAAVGYNGKPRTPDVTV-DETWFSDPELCEASKMW---YVLSKTLAEDAAWKLA 180

Query:   180 EEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAH 239
             +E GLD+VT+ P+ V+GP + P    S  + L ++ G +   +  L+   V++ DVA AH
Sbjct:   181 KEKGLDIVTINPAMVIGPLLQPTLNTSAAAILNLINGAKTFPN--LSFGWVNVKDVANAH 238

Query:   240 IFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPN--VDSLSEIEGYXXXXXXXX 297
             I   E P A GRY      +   E+   L   +P  P+P   VD    +  Y        
Sbjct:   239 IQAFEVPSANGRYCLVERVVHHSEIVNILRELYPNLPLPERCVDENPYVPTYQVSKDKTR 298

Query:   298 XXXDICFTYKYGIDEMFDGAIKCCKERGY 326
                      K  I E     ++  KE+G+
Sbjct:   299 SLGIDYIPLKVSIKE----TVESLKEKGF 323

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2031255 AT1G25460 [Arabidopsis thaliana (taxid:3702)]

 Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
 Identities = 126/324 (38%), Positives = 174/324 (53%)

Query:    10 VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP 69
             VTGGT FI S +I  LL+ G++V TTVR D E ++ + FL +L GA ERL+IF ADL   
Sbjct:     6 VTGGTSFIASHVIKSLLEFGHYVRTTVR-DSEDEEKVGFLWDLKGAKERLKIFEADLTIE 64

Query:    70 ESFDAAIAGCAGVIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKS-GTVKRFVY 126
              SFD A+ G  GV H+A+ + +  D    ++      ++GT+ ++ SC KS  TVKR V 
Sbjct:    65 GSFDEAVNGVDGVFHIASRVSVRLDNNNLDKFDPN--ISGTMNVMNSCAKSRNTVKRIVL 122

Query:   127 TSSGSTV-Y-FSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGL 184
             TSS + + Y F    V  L+E+ W+D +Y +   IW   Y   KTL E+ A   A +  L
Sbjct:   123 TSSSTAIRYRFDATQVSPLNESHWTDLEYCKHFKIW---YAYKKTLGEKEAWRIAADKKL 179

Query:   185 DLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLE 244
             +LV +IPSF +GP + PK   S    L+++ G R  Y        VHIDDV  A I  +E
Sbjct:   180 NLVVVIPSFCIGPILSPKPTSSPLIFLSIIKGTRGTYPNFRG-GFVHIDDVVAAQILAME 238

Query:   245 YPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYXX-XXXXXXXXXDIC 303
              P A GR +CSS+     E+ E L  K+P YP       SE EG             ++ 
Sbjct:   239 EPKASGRILCSSSVAHWSEIIEMLRIKYPLYPFETKCG-SE-EGKDMPHSLDTTKIHELG 296

Query:   304 FTYKYGIDEMFDGAIKCCKERGYL 327
             F     + EMFD  IKC +++G L
Sbjct:   297 FASFKSLTEMFDDCIKCFQDKGLL 320

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016491 "oxidoreductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)]

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 114/280 (40%), Positives = 163/280 (58%)

Query:     2 EEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQI 61
             EE+K  VCVTG +G+I SW++  LL  GY V  +VR DP   +    L  L GA ERL++
Sbjct:     4 EEEK-TVCVTGASGYIASWIVKLLLLRGYTVKASVR-DPNDPRKTEHLLALEGAEERLKL 61

Query:    62 FNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTV 121
             F A+L +  SFD+AI GC GV H A+P   D K+ +  +   AV GTI +L SCLK+ +V
Sbjct:    62 FKANLLEEGSFDSAIDGCEGVFHTASPFYHDVKDPQAELLDPAVKGTINVLSSCLKTSSV 121

Query:   122 KRFVYTSSGSTVYFSGKD---VDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEF 178
             KR V TSS + V F+G       ++DET+++D DY R   +W   YVL+KTL E AA +F
Sbjct:   122 KRVVLTSSIAAVAFNGMPRTPETIVDETWFADPDYCRASKLW---YVLSKTLAENAAWKF 178

Query:   179 AEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARA 238
             A+E+ L LV++ P+ V+GP + P    S  + L+++ G +   +       V++ DVA A
Sbjct:   179 AKENNLQLVSINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTFPNA--TFGWVNVKDVANA 236

Query:   239 HIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIP 278
             HI   E PDA GRY          E+   L   +P++ +P
Sbjct:   237 HIQAFENPDADGRYCLVERVAHYSEVVNILHDLYPDFQLP 276

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2131734 AT4G27250 [Arabidopsis thaliana (taxid:3702)]

 Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
 Identities = 124/336 (36%), Positives = 186/336 (55%)

Query:     2 EEQK-GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
             EE K    CVTG +G+IGSWL+  LL  GY V  T+R   +  K   F +     +ERL+
Sbjct:     6 EESKTATYCVTGASGYIGSWLVKSLLQRGYTVHATLR---DLAKSEYFQSKWK-ENERLR 61

Query:    61 IFNADLNDPESFDAAIAGCAGVIHVAAPIDID------GKET--EEVMTQRAVNGTIGIL 112
             +F ADL D  SFD A+ GC GV HVAA ++ D        E+  +  + + A+ G   +L
Sbjct:    62 LFRADLRDDGSFDDAVKGCDGVFHVAASMEFDISSDHVNLESYVQSKVIEPALKGVRNVL 121

Query:   113 KSCLKSGTVKRFVYTSSGSTVYFSGKDVDM---LDETFWSDEDYIRKLDIWGKSYVLTKT 169
              SCLKS +VKR V+TSS ST+    ++  M   +DET  +  D++ K    G  YVL+K 
Sbjct:   122 SSCLKSKSVKRVVFTSSISTLTAKDENERMRSFVDETCKAHVDHVLKTQASGWIYVLSKL 181

Query:   170 LTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL--LN- 226
             ++E  A  +A+E G+DLV++I + V GPF+ P    SV+  L+ + G+ + ++IL  +N 
Sbjct:   182 VSEEEAFRYAKERGMDLVSVITTTVSGPFLTPFVPSSVQVLLSPITGDSKLFAILSAVNK 241

Query:   227 ----ISMVHIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDS 282
                 I++VHI+D+ RAH+FL+E P AKG+YIC    + + E+     +K     +  V+ 
Sbjct:   242 RMGSIALVHIEDICRAHLFLMEQPKAKGQYICCVDNIDMHELMLHHFSKDYLCKVQKVNE 301

Query:   283 LSEIEGYXXXXXXXXXXXDICFTYKYGIDEMFDGAI 318
               E               ++ F YKYGI+E+ D  I
Sbjct:   302 DEEERECMKPIISSKKLRELGFEYKYGIEEIVDQTI 337

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009062 "fatty acid catabolic process" evidence=RCA

GO:0009686 "gibberellin biosynthetic process" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

TAIR|locus:2051018 CRL2 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 116/280 (41%), Positives = 166/280 (59%)

Query:     4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
             QKGKVCVTG  GF+GSW++  LL   YFV  TVR DP ++K  + L  L  A ++L++F 
Sbjct:     5 QKGKVCVTGAGGFLGSWVVNHLLSRDYFVHGTVR-DPGNEK-YAHLKKLDKAGDKLKLFK 62

Query:    64 ADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEV-MTQRAVNGTIGILKSCLKSGTVK 122
             ADL +  S  +AIAGC+GV HVA P+        EV +   AV+GT+ +LK+C+++  VK
Sbjct:    63 ADLLNYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLKACVEA-KVK 121

Query:   123 RFVYTSSGSTVYFSG--KDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
             R VY SS S V  +       +LDET WSD+DY +K + W   Y L+KT  E  A EFA+
Sbjct:   122 RVVYVSSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTENW---YSLSKTRAESEAFEFAK 178

Query:   181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNIS--MVHIDDVARA 238
               GLDLV++ P+ V+GP +      +  S+L ++   +E Y    N    +V + DVA+A
Sbjct:   179 RTGLDLVSVCPTLVLGPVLQQHTVNA--SSLVLLKLLKEGYESRNNQERHLVDVRDVAQA 236

Query:   239 HIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIP 278
              + + E  +A+GRYIC    +  QE+AE L + +  Y  P
Sbjct:   237 LLLVYEKAEAEGRYICIGHTVREQEVAEKLKSLYLNYNYP 276

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	1.1.1.219	0.914

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	327
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-142
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	1e-121
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	3e-88
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	4e-85
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	4e-83
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	2e-73
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	1e-65
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	2e-56
PLN02989	325	PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase	2e-53
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	3e-52
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	7e-45
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	3e-38
PLN02583	297	PLN02583, PLN02583, cinnamoyl-CoA reductase	5e-36
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	5e-34
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	1e-31
PLN02686	367	PLN02686, PLN02686, cinnamoyl-CoA reductase	1e-30
cd08946	200	cd08946, SDR_e, extended (e) SDRs	9e-24
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	1e-23
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	2e-21
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	6e-19
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	1e-18
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	6e-17
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	2e-16
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	3e-16
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	4e-16
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	8e-16
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	1e-15
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	1e-15
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	2e-15
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	3e-15
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	4e-14
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	2e-13
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	2e-12
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	5e-12
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	7e-12
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	9e-12
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	3e-11
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	7e-11
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	2e-10
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-10
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	4e-10
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	5e-10
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	9e-10
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	1e-09
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	2e-09
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	4e-09
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	4e-09
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	5e-09
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	8e-09
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	2e-08
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	3e-08
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	4e-08
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	6e-08
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	7e-08
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	1e-07
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	2e-07
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	4e-07
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	4e-07
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	8e-07
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	9e-07
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	1e-06
PLN02695	370	PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase	1e-06
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	2e-06
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	2e-06
pfam05368	232	pfam05368, NmrA, NmrA-like family	5e-06
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	5e-06
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	7e-06
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	1e-05
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	2e-05
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	3e-05
TIGR01214	287	TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase	3e-05
pfam08659	181	pfam08659, KR, KR domain	3e-05
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	8e-05
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	9e-05
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	9e-05
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	1e-04
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	3e-04
cd08947	224	cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio	3e-04
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	4e-04
TIGR02197	314	TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep	5e-04
cd08948	308	cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta	7e-04
PRK10675	338	PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro	9e-04
COG1088	340	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel	0.001
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	0.001
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	0.001
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.001
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	0.002
TIGR03589	324	TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd	0.002
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	0.003
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	0.003

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score =  401 bits (1034), Expect = e-142
 Identities = 149/299 (49%), Positives = 198/299 (66%), Gaps = 8/299 (2%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           VCVTG +GFIGSWL+ RLL  GY V  TVR DP  +K ++ L  L GA ERL++F ADL 
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRGYTVRATVR-DPGDEKKVAHLLELEGAKERLKLFKADLL 59

Query: 68  DPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYT 127
           D  SFDAAI GC GV HVA+P+D D ++ EE M + AV GT+ +L++C K+ +VKR V+T
Sbjct: 60  DYGSFDAAIDGCDGVFHVASPVDFDSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVVFT 119

Query: 128 SSGSTVYFS--GKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLD 185
           SS + V ++    +  ++DE+ WSD D+ +K  +W   Y L+KTL E+AA EFAEE+GLD
Sbjct: 120 SSVAAVVWNPNRGEGKVVDESCWSDLDFCKKTKLW---YALSKTLAEKAAWEFAEENGLD 176

Query: 186 LVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEY 245
           LVT+ PS VVGPF+ P    S +  L+++ GN E Y     +++VH+DDVA AHI L E 
Sbjct: 177 LVTVNPSLVVGPFLQPSLNSSSQLILSLLKGNAEMYQNGS-LALVHVDDVADAHILLYEK 235

Query: 246 PDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICF 304
           P A GRYICSS  +T  E+A  L+ K+P+Y IP      +  G     LSSKKL D+ F
Sbjct: 236 PSASGRYICSSHVVTRPELAALLAKKYPQYNIPTKFED-DQPGVARVKLSSKKLKDLGF 293

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score =  351 bits (903), Expect = e-121
 Identities = 155/331 (46%), Positives = 213/331 (64%), Gaps = 10/331 (3%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           M  QK  VCVTG +GFIGSWL+MRLL+ GY V  TVR DP + K +  L +LPGA+ RL 
Sbjct: 1   MGSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVR-DPANVKKVKHLLDLPGATTRLT 59

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           ++ ADL    SFD AI GC GV HVA P+D + K+ E  + +  VNG + I+K+C K+ T
Sbjct: 60  LWKADLAVEGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKT 119

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           V+R V+TSS  TV        + DE  WSD D+ R+  + G  Y ++KTL E+AA ++A 
Sbjct: 120 VRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAA 179

Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI 240
           E+GLD +++IP+ VVGPFI      S+ + L+++ GN   YSI+     VH+DD+  AHI
Sbjct: 180 ENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHI 239

Query: 241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEG----YKLSALSS 296
           FL E+P A+GRYICSS   TI ++A+ L  K+PEY IP     +   G     K    SS
Sbjct: 240 FLFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNIP-----ARFPGIDEDLKSVEFSS 294

Query: 297 KKLLDICFTYKYGIDEMFDGAIKCCKERGYL 327
           KKL D+ FT+KY +++MFDGAI+ C+E+G +
Sbjct: 295 KKLTDLGFTFKYSLEDMFDGAIETCREKGLI 325

Length = 351

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score =  268 bits (686), Expect = 3e-88
 Identities = 143/344 (41%), Positives = 200/344 (58%), Gaps = 23/344 (6%)

Query: 2   EEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQI 61
           E   G  CVTG TG+IGSWL+  LL  GY V  T+R DP   K L  L+      +RL++
Sbjct: 7   ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLR-DPA--KSLHLLSKWKEG-DRLRL 62

Query: 62  FNADLNDPESFDAAIAGCAGVIHVAAPIDID---GKETEEVMTQR-----AVNGTIGILK 113
           F ADL +  SFD A+ GC GV HVAA ++ D        E   Q      A+ GT+ +LK
Sbjct: 63  FRADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLK 122

Query: 114 SCLKSGTVKRFVYTSSGSTVYF---SGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTL 170
           SCLKS TVKR V+TSS ST+     +G+   ++DET  +  D++      G  YVL+K L
Sbjct: 123 SCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLL 182

Query: 171 TERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL----- 225
           TE AA ++A+E+G+DLV++I + V GPF+ P    S++  L+ + G+ + +SIL      
Sbjct: 183 TEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSR 242

Query: 226 --NISMVHIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSL 283
             +I++VHI+D+  AHIFL+E   A+GRYIC      + E+   LS ++P      V   
Sbjct: 243 MGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPCS-NIQVRLD 301

Query: 284 SEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAIKCCKERGYL 327
            E  G   S +SSKKL D+ F YKYGI+E+ D  I CC + G+L
Sbjct: 302 EEKRGSIPSEISSKKLRDLGFEYKYGIEEIIDQTIDCCVDHGFL 345

Length = 353

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score =  259 bits (663), Expect = 4e-85
 Identities = 133/337 (39%), Positives = 204/337 (60%), Gaps = 23/337 (6%)

Query: 5   KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA 64
           K   CV GGTGF+ S LI  LL  GY V TTVR DPE++K ++ L  L    + L+IF A
Sbjct: 9   KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVR-DPENQKKIAHLRALQELGD-LKIFGA 66

Query: 65  DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRF 124
           DL D ESF+A IAGC  V HVA P++   ++ E  M + A+ G   +LK+C K+ +VKR 
Sbjct: 67  DLTDEESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRV 126

Query: 125 VYTSSGSTVY---FSGKDVDMLDETFWSDEDYIR--KLDIWGKSYVLTKTLTERAALEFA 179
           + TSS + V     SG  + +++E  W+D +++   K   WG  Y  +KTL E+AA +FA
Sbjct: 127 ILTSSAAAVSINKLSGTGL-VMNEKNWTDVEFLTSEKPPTWG--YPASKTLAEKAAWKFA 183

Query: 180 EEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGN-------REEYSILLNISMVHI 232
           EE+ +DL+T+IP+ + GP +      S+   ++++ GN       +    +  +IS+ H+
Sbjct: 184 EENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHV 243

Query: 233 DDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPN--VDSLSEIEGYK 290
           +DV RAHIFL E   A GRYIC +A  ++ E+A+FL  ++P+Y +P    D  S+    K
Sbjct: 244 EDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVPTDFGDFPSKA---K 300

Query: 291 LSALSSKKLLDICFTYKYGIDEMFDGAIKCCKERGYL 327
           L  +SS+KL+   F+++YGI+E++D  ++  K +G L
Sbjct: 301 L-IISSEKLISEGFSFEYGIEEIYDQTVEYFKAKGLL 336

Length = 338

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score =  252 bits (646), Expect = 4e-83
 Identities = 114/302 (37%), Positives = 167/302 (55%), Gaps = 14/302 (4%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           V VTG +GF+ S ++ +LL+ GY V  TVR DP   K ++ L +L     RL++  ADL 
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVR-DPSKVKKVNHLLDLDAKPGRLELAVADLT 59

Query: 68  DPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYT 127
           D +SFD  I GCAGV HVA P+    K+  EV+   A+ GT+  LK+   + +VKRFV T
Sbjct: 60  DEQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKP-AIGGTLNALKAAAAAKSVKRFVLT 118

Query: 128 SSGSTVYFSGKDVD--MLDETFWSDEDYIR--KLDIWGKSYVLTKTLTERAALEFAEEHG 183
           SS  +V     +V+  +LDE  W+ E++    K   W   Y  +KTL E+AA +FA+E+ 
Sbjct: 119 SSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWV--YAASKTLAEKAAWKFADENN 176

Query: 184 LDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNI---SMVHIDDVARAHI 240
           +DL+T+IP+  +G     +   S    ++++ GN      L  I     VH+ D+  AHI
Sbjct: 177 IDLITVIPTLTIGTIFDSETPSSSGWAMSLITGNEGVSPALALIPPGYYVHVVDICLAHI 236

Query: 241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLL 300
             LE P A+GRYIC++       + + L  K+P Y  P      + +G  LS  SS KLL
Sbjct: 237 GCLELPIARGRYICTAGNFDWNTLLKTLRKKYPSYTFPT--DFPD-QGQDLSKFSSAKLL 293

Query: 301 DI 302
           +I
Sbjct: 294 EI 295

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score =  229 bits (585), Expect = 2e-73
 Identities = 124/331 (37%), Positives = 179/331 (54%), Gaps = 22/331 (6%)

Query: 6   GK-VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA 64
           GK VCVTG +G+I SWL+  LL  GY V  TVR DP   K    L  L GA ERL +F A
Sbjct: 4   GKVVCVTGASGYIASWLVKLLLQRGYTVKATVR-DPNDPKKTEHLLALDGAKERLHLFKA 62

Query: 65  DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRF 124
           +L +  SFD+ + GC GV H A+P   D  + +  +   AV GT+ +L+SC K  +VKR 
Sbjct: 63  NLLEEGSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRV 122

Query: 125 VYTSSGSTVYFSGK----DVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           V TSS + V ++GK    DV ++DET++SD  +  +  +W   YVL+KTL E AA +FA+
Sbjct: 123 VVTSSMAAVAYNGKPLTPDV-VVDETWFSDPAFCEESKLW---YVLSKTLAEEAAWKFAK 178

Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISM--VHIDDVARA 238
           E+G+D+VT+ P+ V+GP + P    S  + L ++ G         N S   V + DVA A
Sbjct: 179 ENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGA----QTFPNASYRWVDVRDVANA 234

Query: 239 HIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIP--NVDSLSEIEGYKLSALSS 296
           HI   E P A GRY      +   E+ + L   +P   +P    D    +  Y++S   +
Sbjct: 235 HIQAFEIPSASGRYCLVERVVHYSEVVKILHELYPTLQLPEKCADDKPYVPTYQVSKEKA 294

Query: 297 KKLLDICFTYKYGIDEMFDGAIKCCKERGYL 327
           K  L I F     ++      ++  KE+G+L
Sbjct: 295 KS-LGIEFI---PLEVSLKDTVESLKEKGFL 321

Length = 322

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score =  208 bits (532), Expect = 1e-65
 Identities = 100/306 (32%), Positives = 155/306 (50%), Gaps = 18/306 (5%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
            V VTG TGFI S ++ +LL  GY V  TVRS       L  L    G ++RL+    D 
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRS-LSKSAKLKALLKAAGYNDRLEFVIVDD 59

Query: 67  -NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFV 125
              P ++D A+ G   VIHVA+P    G + E+ +   AV GT+ +L++   +G+VKR V
Sbjct: 60  LTAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAAGSVKRVV 119

Query: 126 YTSSGSTVYFSGKDVD--MLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH- 182
            TSS + V     +    +  E  W+D    +   +    Y+ +KTL E+AA EF +E+ 
Sbjct: 120 LTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDA--YIASKTLAEKAAWEFVKENK 177

Query: 183 -GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV--LGNREEYSIL--LNISMVHIDDVAR 237
              +L+T+ P +V+GP      A  + S+  ++  L + +  +I   L    V + DVA 
Sbjct: 178 PKFELITINPGYVLGP---SLLADELNSSNELINKLLDGKLPAIPPNLPFGYVDVRDVAD 234

Query: 238 AHIFLLEYPDAKG-RYICSSAKLTIQEMAEFLSAKHPEY--PIPNVDSLSEIEGYKLSAL 294
           AH+  LE P+A G R+I S+   + QE+A+ L  + P+   P P  + L      K    
Sbjct: 235 AHVRALESPEAAGQRFIVSAGPFSFQEIADLLREEFPQLTAPFPAPNPLMLSILVKFDNR 294

Query: 295 SSKKLL 300
            S++LL
Sbjct: 295 KSEELL 300

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score =  185 bits (470), Expect = 2e-56
 Identities = 108/286 (37%), Positives = 156/286 (54%), Gaps = 17/286 (5%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           VCVTG +G+I SW++  LL  GY V  TVR D   +K    L  L GA ERL++F ADL 
Sbjct: 8   VCVTGASGYIASWIVKLLLLRGYTVKATVR-DLTDRKKTEHLLALDGAKERLKLFKADLL 66

Query: 68  DPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYT 127
           +  SF+ AI GC  V H A+P+    K+ +  +   A+ GTI +L +C ++ +VKR + T
Sbjct: 67  EESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILT 126

Query: 128 SSGSTVYFSGKDV---DMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGL 184
           SS + V F    +   D++DETF+SD    R+   W   Y L+K L E AA EFA+++G+
Sbjct: 127 SSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNW---YPLSKILAENAAWEFAKDNGI 183

Query: 185 DLVTLIPSFVVGPFICPKFAGSVRSTLAMVLG----NREEYSILLNISMVHIDDVARAHI 240
           D+V L P F+ GP + P    SV   +  + G    N   Y        V + DVA AHI
Sbjct: 184 DMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFY------RFVDVRDVALAHI 237

Query: 241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEI 286
             LE P A GRYI     +++ ++ + L    P+  I + +  SE+
Sbjct: 238 KALETPSANGRYIIDGPIMSVNDIIDILRELFPDLCIADTNEESEM 283

Length = 322

>gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein

 Score =  177 bits (451), Expect = 2e-53
 Identities = 107/276 (38%), Positives = 155/276 (56%), Gaps = 10/276 (3%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           VCVTG +G+I SW++  LL  GY +  TVR DP+ +K    L  L GA ERL++F ADL 
Sbjct: 8   VCVTGASGYIASWIVKLLLFRGYTINATVR-DPKDRKKTDHLLALDGAKERLKLFKADLL 66

Query: 68  DPESFDAAIAGCAGVIHVAAPIDIDGKETEEV-MTQRAVNGTIGILKSCLKSGTVKRFVY 126
           D  SF+ AI GC  V H A+P+ I  K   +V +   AVNGTI +L++C K  +VKR + 
Sbjct: 67  DEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVIL 126

Query: 127 TSSGSTVYFSGKDV---DMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG 183
           TSS + V      +   D++DETF+++  +  +   W   YVL+KTL E AA  FA+++ 
Sbjct: 127 TSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW---YVLSKTLAEDAAWRFAKDNE 183

Query: 184 LDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLL 243
           +DL+ L P  V GP + P    SV   + ++ G     +   +   V + DVA AH+  L
Sbjct: 184 IDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTT--HHRFVDVRDVALAHVKAL 241

Query: 244 EYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPN 279
           E P A GRYI     +TI+++   L    P+  I +
Sbjct: 242 ETPSANGRYIIDGPVVTIKDIENVLREFFPDLCIAD 277

Length = 325

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score =  175 bits (444), Expect = 3e-52
 Identities = 115/324 (35%), Positives = 176/324 (54%), Gaps = 18/324 (5%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           VCVTG  G+I SW++  LL+ GY V  TVR +P+  K+ + L  L G  ERL +  ADL 
Sbjct: 13  VCVTGAGGYIASWIVKILLERGYTVKGTVR-NPDDPKN-THLRELEGGKERLILCKADLQ 70

Query: 68  DPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYT 127
           D E+  AAI GC GV H A+P+  D     E M + AVNG   ++ +  ++  VKR V T
Sbjct: 71  DYEALKAAIDGCDGVFHTASPVTDD----PEQMVEPAVNGAKFVINAAAEA-KVKRVVIT 125

Query: 128 SSGSTVYFS-GKDVD-MLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLD 185
           SS   VY    +D + ++DE+ WSD D+ +    W   Y   K + E+AA E A+E G+D
Sbjct: 126 SSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNW---YCYGKMVAEQAAWETAKEKGVD 182

Query: 186 LVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHID--DVARAHIFLL 243
           LV L P  V+GP + P    S+   L  + G+ + Y+   N++  ++D  DVA AH+ + 
Sbjct: 183 LVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYA---NLTQAYVDVRDVALAHVLVY 239

Query: 244 EYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDIC 303
           E P A GRY+ + +     E+ E L+   PEYP+P      +    K    +++K+ D+ 
Sbjct: 240 EAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLG 299

Query: 304 FTYKYGIDEMFDGAIKCCKERGYL 327
             +      ++D  +K  +E+G+L
Sbjct: 300 LEFTSTKQSLYD-TVKSLQEKGHL 322

Length = 342

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  155 bits (392), Expect = 7e-45
 Identities = 89/324 (27%), Positives = 130/324 (40%), Gaps = 36/324 (11%)

Query: 10  VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP 69
           VTGG GFIGS L+ RLL  G+ V    R        LS +               DL D 
Sbjct: 5   VTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVE----------FVVLDLTDR 54

Query: 70  ESFDAAIAGC-AGVIHVAAPIDIDGKETEEVMTQRAVN--GTIGILKSCLKSGTVKRFVY 126
           +  D    G    VIH+AA   +      +      VN  GT+ +L++   +G VKRFV+
Sbjct: 55  DLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVF 113

Query: 127 TSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDL 186
            SS S VY               DED      +    Y ++K   E+    +A  +GL +
Sbjct: 114 ASSVSVVYGDPPP-------LPIDEDLGPPRPLN--PYGVSKLAAEQLLRAYARLYGLPV 164

Query: 187 VTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN-----ISMVHIDDVARAHIF 241
           V L P  V GP   P  +  V S     L   E   ++          V++DDVA A + 
Sbjct: 165 VILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLL 224

Query: 242 LLEYPDAKGRYICS-SAKLTIQEMAEFLSAKHPE-----YPIPNVDSLSEIEGYKLSALS 295
            LE PD     I S +A++T++E+AE ++            IP        EG  L    
Sbjct: 225 ALENPDGGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISK 284

Query: 296 SKKLLDICFTYKYGIDEMFDGAIK 319
           ++  L   +  K  ++E     ++
Sbjct: 285 ARAALG--WEPKVSLEEGLADTLE 306

Length = 314

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score =  137 bits (348), Expect = 3e-38
 Identities = 88/286 (30%), Positives = 118/286 (41%), Gaps = 50/286 (17%)

Query: 10  VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP 69
           VTG TGF+GS L+  LL  GY V   VRS      D   L  LP     +++   DL D 
Sbjct: 3   VTGATGFLGSNLVRALLAQGYRVRALVRS----GSDAVLLDGLP-----VEVVEGDLTDA 53

Query: 70  ESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVN--GTIGILKSCLKSGTVKRFVYT 127
            S  AA+ GC  V H+AA   +  K+ +E       N  GT  +L + L++G V+R V+T
Sbjct: 54  ASLAAAMKGCDRVFHLAAFTSLWAKDRKE---LYRTNVEGTRNVLDAALEAG-VRRVVHT 109

Query: 128 SSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLV 187
           SS + +                DE        +   Y  +K L E   LE A E GLD+V
Sbjct: 110 SSIAALGGPPDGR--------IDETTPWNERPFPNDYYRSKLLAELEVLEAAAE-GLDVV 160

Query: 188 TLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN----------ISMVHIDDVAR 237
            + PS V GP       G    T   +          LN           S V + DVA 
Sbjct: 161 IVNPSAVFGP-------GDEGPTSTGLDVLD-----YLNGKLPAYPPGGTSFVDVRDVAE 208

Query: 238 AHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSA----KHPEYPIPN 279
            HI  +E      RYI     L+ +++ E L+     K P   IP 
Sbjct: 209 GHIAAMEKGRRGERYILGGENLSFKQLFETLAEITGVKPPRRTIPP 254

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase

 Score =  131 bits (331), Expect = 5e-36
 Identities = 81/306 (26%), Positives = 145/306 (47%), Gaps = 25/306 (8%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
            +E    VCV   +G++G WL+ RLL  GY V   V+ + E + +      L    ERL+
Sbjct: 2   FDESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEI-RGLSCEEERLK 60

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           +F+ D  D  S   A+ GC+G+     P   D    +E M    V     +L++C ++ T
Sbjct: 61  VFDVDPLDYHSILDALKGCSGLFCCFDPPS-DYPSYDEKMVDVEVRAAHNVLEACAQTDT 119

Query: 121 VKRFVYTSSGSTVYFSGKDVDM---LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALE 177
           +++ V+TSS + V +   ++     +DE  WSD+++ RK  +W   + L KTL+E+ A  
Sbjct: 120 IEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLW---HALAKTLSEKTAWA 176

Query: 178 FAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVAR 237
            A + G+++V++    ++GP        S+      + G  + Y   + +  V ++ +  
Sbjct: 177 LAMDRGVNMVSINAGLLMGP--------SLTQHNPYLKGAAQMYENGV-LVTVDVNFLVD 227

Query: 238 AHIFLLEYPDAKGRYICSSAKLTIQE----MAEFLSAKHPEYPIPNVDSLSEIEGYKLSA 293
           AHI   E   + GRY+C +  +  +E    +A+ LS   P  P   +      +      
Sbjct: 228 AHIRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPPPYEMQGSEVYQ----QR 283

Query: 294 LSSKKL 299
           + +KKL
Sbjct: 284 IRNKKL 289

Length = 297

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score =  126 bits (319), Expect = 5e-34
 Identities = 101/279 (36%), Positives = 136/279 (48%), Gaps = 28/279 (10%)

Query: 6   GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNAD 65
            KV VTG TGF+GS ++  LL+ G  V   VR       D   L  L       +I   D
Sbjct: 1   MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPT----SDRRNLEGLDV-----EIVEGD 51

Query: 66  LNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFV 125
           L DP S   A+AGC  + HVAA   +   + EE M    V GT  +L++ L++G V+R V
Sbjct: 52  LRDPASLRKAVAGCRALFHVAADYRLWAPDPEE-MYAANVEGTRNLLRAALEAG-VERVV 109

Query: 126 YTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLD 185
           YTSS +T+   G D    DET  S  D     D+ G  Y  +K L E+AALE A E GL 
Sbjct: 110 YTSSVATLGVRG-DGTPADETTPSSLD-----DMIG-HYKRSKFLAEQAALEMAAEKGLP 162

Query: 186 LVTLIPSFVVGPF-ICPKFAGSVRSTLAMVLGNREEY-SILLNISMVHIDDVARAHIFLL 243
           +V + PS  +GP  I P   G  R  +  + G    Y    LN+  VH+DDVA  H+  L
Sbjct: 163 VVIVNPSTPIGPRDIKPTPTG--RIIVDFLNGKMPAYVDTGLNL--VHVDDVAEGHLLAL 218

Query: 244 EYPDAKGRYICSSAKLTIQEMAEFLSA----KHPEYPIP 278
           E      RYI     LT++++ + L+       P   +P
Sbjct: 219 ERGRIGERYILGGENLTLKQILDKLAEITGRPAPRVKLP 257

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score =  118 bits (297), Expect = 1e-31
 Identities = 74/252 (29%), Positives = 110/252 (43%), Gaps = 29/252 (11%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           + VTGGTGFIGS L+ RLL  GY V    R                  + R++    DL 
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSE----------SLNTGRIRFHEGDLT 50

Query: 68  DPESFDAAIAGCA--GVIHVAAPIDID-GKETEEVMTQRAVNGTIGILKSCLKSGTVKRF 124
           DP++ +  +A      VIH+AA   +    E      +  V GT+ +L++  ++G VKRF
Sbjct: 51  DPDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAG-VKRF 109

Query: 125 VYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGL 184
           V+ SS S VY  G       +   +++  +  L      Y   K   ER    +A  +GL
Sbjct: 110 VFASS-SEVY--GDV----ADPPITEDTPLGPLS----PYAAAKLAAERLVEAYARAYGL 158

Query: 185 DLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISM----VHIDDVARAHI 240
             V L    V GP     F   V   L   +   +   +L + +     +++DDVARA +
Sbjct: 159 RAVILRLFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAIL 218

Query: 241 FLLEYPDAKGRY 252
             LE+PD    Y
Sbjct: 219 LALEHPDGGEIY 230

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase

 Score =  118 bits (298), Expect = 1e-30
 Identities = 97/315 (30%), Positives = 156/315 (49%), Gaps = 37/315 (11%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN---- 63
           VCVTGG  F+G  ++ RLL HGY    +VR   + ++D   L  +    E  +  +    
Sbjct: 56  VCVTGGVSFLGLAIVDRLLRHGY----SVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWT 111

Query: 64  --ADLNDPESFDAAIAGCAGVIHVAAPIDIDG-----KETEEVMTQRAVNGTIGILKSCL 116
             A+L +PES   A  GCAGV H +A +D  G     K   E+  + + N    ++++C+
Sbjct: 112 VMANLTEPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASEN----VIEACV 167

Query: 117 KSGTVKRFVYTSS-GSTVYFSGKDVDM---LDETFWSDEDYIRKLDIWGKSYVLTKTLTE 172
           ++ +V++ V+TSS  + V+      D+   +DE  WSDE + R   +W   Y L K   E
Sbjct: 168 RTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLW---YALGKLKAE 224

Query: 173 RAALEFAEEHGLDLVTLIPSFVVGP-FICPKFAGSVRSTLAMVLGNREEYSILLNISMVH 231
           +AA   A   GL L T+ P+ V GP F    F  +  +T+A + G +E  +  L ++   
Sbjct: 225 KAAWRAARGKGLKLATICPALVTGPGF----FRRNSTATIAYLKGAQEMLADGL-LATAD 279

Query: 232 IDDVARAHIFLLEYPDAK---GRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEG 288
           ++ +A AH+ + E    K   GRYIC    ++ ++ AE L A+    PI  +   S  + 
Sbjct: 280 VERLAEAHVCVYEAMGNKTAFGRYICFDHVVSREDEAEEL-ARQIGLPINKIAGNSSSDD 338

Query: 289 YKLS-ALSSKKLLDI 302
                 LS+KKL  +
Sbjct: 339 TPARFELSNKKLSRL 353

Length = 367

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 96.2 bits (240), Expect = 9e-24
 Identities = 68/249 (27%), Positives = 98/249 (39%), Gaps = 59/249 (23%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           + VTGG GFIGS L+ RLL+ G+ V    R D                            
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVIDRLD---------------------------- 32

Query: 68  DPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRA-VNGTIGILKSCLKSGTVKRFVY 126
                         V+H+AA + +              V GT+ +L++  K+G VKRFVY
Sbjct: 33  -------------VVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAG-VKRFVY 78

Query: 127 TSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDL 186
            SS S VY S + +         +E   R L  +G S    K   E     + E +GL +
Sbjct: 79  ASSAS-VYGSPEGLP------EEEETPPRPLSPYGVS----KLAAEHLLRSYGESYGLPV 127

Query: 187 VTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISM----VHIDDVARAHIFL 242
           V L  + V GP   P+  G V   +   L   +  ++    +     +H+DDV RA +  
Sbjct: 128 VILRLANVYGPGQRPRLDGVVNDFIRRAL-EGKPLTVFGGGNQTRDFIHVDDVVRAILHA 186

Query: 243 LEYPDAKGR 251
           LE P   G 
Sbjct: 187 LENPLEGGG 195

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 98.1 bits (245), Expect = 1e-23
 Identities = 74/280 (26%), Positives = 108/280 (38%), Gaps = 45/280 (16%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLS--FLTNLPGASERLQIFNA 64
           +V VTGG GFIGS L+ RLL+ G+ V      D     +LS     NLP     ++    
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEVIVL---D-----NLSTGKKENLPEVKPNVKFIEG 52

Query: 65  DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRA-VNGTIGILKSCLKSGTVKR 123
           D+ D E  + A  G   V H AA   +     + +      V GT+ +L++  K+G VKR
Sbjct: 53  DIRDDELVEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAG-VKR 111

Query: 124 FVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS-YVLTKTLTERAALEFAEEH 182
           FVY SS S                  DED+         S Y ++K   E     FA  +
Sbjct: 112 FVYASSSSVYGDP--------PYLPKDEDHP----PNPLSPYAVSKYAGELYCQVFARLY 159

Query: 183 GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISM------------V 230
           GL  V+L    V GP   P          A V+        L                  
Sbjct: 160 GLPTVSLRYFNVYGPRQDPN------GGYAAVIPIF-IERALKGEPPTIYGDGEQTRDFT 212

Query: 231 HIDDVARAHIFLLEYPDAKGRY-ICSSAKLTIQEMAEFLS 269
           +++DV  A++           Y I +  + ++ E+AE + 
Sbjct: 213 YVEDVVEANLLAATAGAGGEVYNIGTGKRTSVNELAELIR 252

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 91.6 bits (228), Expect = 2e-21
 Identities = 68/243 (27%), Positives = 107/243 (44%), Gaps = 30/243 (12%)

Query: 10  VTGGTGFIGSWLIMRLLDHGYFVTTTV---RSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           VTGG GF+G  ++  LL  G      V   R  PE  +D S         + +     D+
Sbjct: 2   VTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFS-------KLQVITYIEGDV 54

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
            D +    A+ G   VIH AA ID+ GK   + + +  V GT  +L +C+K+G V+  VY
Sbjct: 55  TDKQDLRRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNVLDACVKAG-VRVLVY 113

Query: 127 TSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALE---FAEEHG 183
           TSS   V  +     +++     DE    +       Y  +K L E+  L+      ++G
Sbjct: 114 TSSMEVVGPNSYGQPIVN----GDETTPYES-THQDPYPESKALAEKLVLKANGSTLKNG 168

Query: 184 LDLVT--LIPSFVVGP---FICPKFAGSVRSTLAMV-LGNREEYSILLNISMVHIDDVAR 237
             L T  L P+ + G    F+ P     +++ LA    G++   S       V++ +VA 
Sbjct: 169 GRLYTCALRPAGIFGEGDPFLFPFLVRLLKNGLAKFRTGDKNVLS-----DRVYVGNVAW 223

Query: 238 AHI 240
           AHI
Sbjct: 224 AHI 226

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 85.1 bits (211), Expect = 6e-19
 Identities = 78/296 (26%), Positives = 115/296 (38%), Gaps = 67/296 (22%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           KV VTG  GFIG  L+ +LL  G  V   VR+            N   +        A+L
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVRN----------AENAEPSVVL-----AEL 45

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQ-RAVN--GTIGILKSCLKSGTVKR 123
            D +SF     G   V+H+AA + +   +  + ++  R VN   T  + ++  + G VKR
Sbjct: 46  PDIDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQG-VKR 104

Query: 124 FVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG 183
           FV+ SS   V   G      DET           D +G+S    K   ERA LE     G
Sbjct: 105 FVFLSSVK-VNGEGTVGAPFDET--DPPA---PQDAYGRS----KLEAERALLELGASDG 154

Query: 184 LDLVTLIPSFVVGPFICPKFAGSVRSTLAM--------------VLGNREEYSILLNISM 229
           +++V L P  V GP         VR   A                + NR         S+
Sbjct: 155 MEVVILRPPMVYGP--------GVRGNFARLMRLIDRGLPLPPGAVKNRR--------SL 198

Query: 230 VHIDDVARAHIFLLEYPDAKGR-YI------CSSAKLTIQEMAEFLSAKHPEYPIP 278
           V +D++  A    +  P A    ++       S+A+L + E+   L       P+P
Sbjct: 199 VSLDNLVDAIYLCISLPKAANGTFLVSDGPPVSTAEL-VDEIRRALGKPTRLLPVP 253

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 84.3 bits (209), Expect = 1e-18
 Identities = 76/282 (26%), Positives = 110/282 (39%), Gaps = 46/282 (16%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           KV VTG TGFIGS ++  L+  G+ V    RSD    K    L    GA    Q+   DL
Sbjct: 2   KVFVTGATGFIGSAVVRELVAAGHEVVGLARSDAGAAK----LEA-AGA----QVHRGDL 52

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
            D +    A A    VIH+A   D D       + +RA+      L   L+ GT K  +Y
Sbjct: 53  EDLDILRKAAAEADAVIHLAFTHDFDNFAQACEVDRRAIEA----LGEALR-GTGKPLIY 107

Query: 127 TSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDL 186
           T SG  +          +E   + +D               + ++E AALE AE      
Sbjct: 108 T-SGIWLLGPTGG---QEEDEEAPDD---------PPTPAARAVSEAAALELAERGVRAS 154

Query: 187 VTLIPSFVVGP----FICPKFAGSVRSTLAMVLG---NREEYSILLNISMVHIDDVARAH 239
           V  +P  V G     F+    A +    ++  +G   NR           VH DD AR +
Sbjct: 155 VVRLPPVVHGRGDHGFVPMLIAIAREKGVSAYVGDGKNR--------WPAVHRDDAARLY 206

Query: 240 IFLLEYPDAKGRYICS-SAKLTIQEMAEFLSAKHPEYPIPNV 280
              LE   A   Y       + ++++AE +  +     +P V
Sbjct: 207 RLALEKGKAGSVYHAVAEEGIPVKDIAEAIGRRL---GVPVV 245

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 80.1 bits (198), Expect = 6e-17
 Identities = 62/194 (31%), Positives = 88/194 (45%), Gaps = 24/194 (12%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
             V GG+GF+G  L+ +LL  G          P  + D       P +S R+Q    DL 
Sbjct: 2   CLVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELD-------PSSSGRVQFHTGDLT 54

Query: 68  DPESFDAAI--AGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFV 125
           DP+  + A    G   V H A+P      +    +    V GT  ++++C K G VK+ V
Sbjct: 55  DPQDLEKAFNEKGPNVVFHTASPDHGSNDDLYYKVN---VQGTRNVIEACRKCG-VKKLV 110

Query: 126 YTSSGSTVYFSGKDVDMLDETFWSDEDYIRK-LDIWGKSYVLTKTLTERAALEF-AEEHG 183
           YTSS S V F+G+D+   DE+      Y  K  D    +Y  TK L E+  L+    E G
Sbjct: 111 YTSSASVV-FNGQDIINGDESL----PYPDKHQD----AYNETKALAEKLVLKANDPESG 161

Query: 184 LDLVTLIPSFVVGP 197
           L    L P+ + GP
Sbjct: 162 LLTCALRPAGIFGP 175

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 78.2 bits (193), Expect = 2e-16
 Identities = 61/241 (25%), Positives = 97/241 (40%), Gaps = 34/241 (14%)

Query: 8   VCVTGGTGFIGSWLIMRLLD-HGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           V VTGG+GF G  L+ +LL+  G +V +   + P          N       ++    D+
Sbjct: 2   VLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPN-------IEFLKGDI 54

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVN--GTIGILKSCLKSGTVKRF 124
            D    + A++G   V H AA + +     +       VN  GT  +L +C + G V++F
Sbjct: 55  TDRNDVEQALSGADCVFHTAAIVPL-AGPRDLY---WEVNVGGTQNVLDACQRCG-VQKF 109

Query: 125 VYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGL 184
           VYTSS S+V F G+++   DET       +    +    Y  TK + E   LE      L
Sbjct: 110 VYTSS-SSVIFGGQNIHNGDET-------LPYPPLDSDMYAETKAIAEIIVLEANGRDDL 161

Query: 185 DLVTLIPSFVVGPFICPKFAGSVRSTLA-----MVLGNREEYSILLNISMVHIDDVARAH 239
               L P+ + GP         +           V G          +   ++ ++A AH
Sbjct: 162 LTCALRPAGIFGPG-DQGLVPILFEWAEKGLVKFVFGRGNNL-----VDFTYVHNLAHAH 215

Query: 240 I 240
           I
Sbjct: 216 I 216

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 77.4 bits (191), Expect = 3e-16
 Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 33/266 (12%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           +V + GG GFIGS L+  LL+ G  V    RS P ++  L  +  + G          D 
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPPYELPLGGVDYIKG----------DY 50

Query: 67  NDPESFDAAIAGCAGVIHVAA---PIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKR 123
            +    ++A+ G   VIH+A+   P   +     ++  Q  V  T+ +L++C  +G + +
Sbjct: 51  ENRADLESALVGIDTVIHLASTTNPATSNKNPILDI--QTNVAPTVQLLEACAAAG-IGK 107

Query: 124 FVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG 183
            ++ SSG TVY  G      ++   S+ D    +  +G    ++K   E+    +   +G
Sbjct: 108 IIFASSGGTVY--GVP----EQLPISESDPTLPISSYG----ISKLAIEKYLRLYQYLYG 157

Query: 184 LDLVTLIPSFVVGPFICP-KFAGSVRSTLAMVLGNREEYSILLNISMV----HIDDVARA 238
           LD   L  S   GP   P    G +   L  +L   E   I  +   +    +IDD+  A
Sbjct: 158 LDYTVLRISNPYGPGQRPDGKQGVIPIALNKILRG-EPIEIWGDGESIRDYIYIDDLVEA 216

Query: 239 HIFLLEYPDAKGRY-ICSSAKLTIQE 263
            + LL     +  + I S    ++ E
Sbjct: 217 LMALLRSKGLEEVFNIGSGIGYSLAE 242

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 77.0 bits (190), Expect = 4e-16
 Identities = 56/233 (24%), Positives = 85/233 (36%), Gaps = 27/233 (11%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           + VTG  G +G  L  RL      V      D             PG+  +++    D+ 
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPR-VIGVDGLDRRRP---------PGSPPKVEYVRLDIR 50

Query: 68  DPESFDA-AIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
           DP + D         V+H+A    +D         +  V+GT  +L +C  +G V R V 
Sbjct: 51  DPAAADVFREREADAVVHLAF--ILDPPRDGAERHRINVDGTQNVLDACAAAG-VPRVVV 107

Query: 127 TSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH-GLD 185
           TSS   VY +  D           +  +R       +Y   K   E+   EF   H  L+
Sbjct: 108 TSSV-AVYGAHPDNPAPLTE----DAPLRGSP--EFAYSRDKAEVEQLLAEFRRRHPELN 160

Query: 186 LVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARA 238
           +  L P+ ++GP         +      V G  +          +H DDVARA
Sbjct: 161 VTVLRPATILGPGTRNTTRDFLSPRRLPVPGGFD-----PPFQFLHEDDVARA 208

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 76.3 bits (188), Expect = 8e-16
 Identities = 66/285 (23%), Positives = 115/285 (40%), Gaps = 47/285 (16%)

Query: 10  VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN-- 67
           VTGGTGF+G  L+ RLL++G+ V   VRS+    +    +      ++R+++   DL   
Sbjct: 3   VTGGTGFLGRHLVKRLLENGFKVLVLVRSESL-GEAHERIEEAGLEADRVRVLEGDLTQP 61

Query: 68  ----DPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKR 123
                  +          VIH AA  D       E   +  ++GT  +L+   +    +R
Sbjct: 62  NLGLSAAASRELAGKVDHVIHCAASYDFQ--APNEDAWRTNIDGTEHVLELAARLDI-QR 118

Query: 124 FVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRK--LDIWGKSYVLTKTLTERAALEFAEE 181
           F Y    ST Y +G     + E     E    +   + + +S    K   E+     A +
Sbjct: 119 FHYV---STAYVAGNREGNIRE----TELNPGQNFKNPYEQS----KAEAEQLVRAAATQ 167

Query: 182 HGLDLVTLIPSFVVGP-------------FICPKFAGSVRSTLAMVLGNREEYSILLNIS 228
             + L    PS VVG               +    A  +   L M  GN+        ++
Sbjct: 168 --IPLTVYRPSIVVGDSKTGRIEKIDGLYELLNLLA-KLGRWLPMP-GNKGAR-----LN 218

Query: 229 MVHIDDVARAHIFLLEYPDAKGR--YICSSAKLTIQEMAEFLSAK 271
           +V +D VA A ++L + P+A G+  ++      T++E+A+   + 
Sbjct: 219 LVPVDYVADAIVYLSKKPEANGQIFHLTDPTPQTLREIADLFKSA 263

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 75.0 bits (185), Expect = 1e-15
 Identities = 64/283 (22%), Positives = 107/283 (37%), Gaps = 55/283 (19%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
            V V G TGFIG +++ RL   G  V    R +   ++ L  +    G   ++     DL
Sbjct: 2   VVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLL--VMGDLG---QVLFVEFDL 56

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVN--GTIGILKSCLKSGTVKRF 124
            D ES   A+ G   VI++      + K      +   V+  G   + K+  ++G V+R 
Sbjct: 57  RDDESIRKALEGSDVVINLVG-RLYETKN----FSFEDVHVEGPERLAKAAKEAG-VERL 110

Query: 125 VYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGL 184
           ++ S+       G D +       S   Y+R           +K   E A  E   E   
Sbjct: 111 IHISA------LGADAN-------SPSKYLR-----------SKAEGEEAVREAFPEA-- 144

Query: 185 DLVTLIPSFVVGP---FICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIF 241
               + PS V G    F+  +FA  + + L          +       V++ DVA A   
Sbjct: 145 --TIVRPSVVFGREDRFLN-RFA-KLLAFLPFPPLIGGGQTK---FQPVYVGDVAEAIAR 197

Query: 242 LLEYPDAKGR--YICSSAKLTIQEMAEFLSA-KHPEY---PIP 278
            L+ P+ +G+   +      T+ E+ E L      +    P+P
Sbjct: 198 ALKDPETEGKTYELVGPKVYTLAELVELLRRLGGRKRRVLPLP 240

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 73.8 bits (182), Expect = 1e-15
 Identities = 44/123 (35%), Positives = 56/123 (45%), Gaps = 14/123 (11%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           KV V G TG +G  ++  LLD GY V   VR DP   + L         +   ++   DL
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVR-DPSQAEKL--------EAAGAEVVVGDL 51

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
            D ES  AA+ G   VI  A      G  TE V       G I ++ +  K+G VKRFV 
Sbjct: 52  TDAESLAAALEGIDAVISAAGSGGKGGPRTEAVDYD----GNINLIDAAKKAG-VKRFVL 106

Query: 127 TSS 129
            SS
Sbjct: 107 VSS 109

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 75.4 bits (186), Expect = 2e-15
 Identities = 57/190 (30%), Positives = 80/190 (42%), Gaps = 18/190 (9%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGAS-ERLQIFNAD 65
            V VTG  GFIGS L  RLL  G+ V              +    L  A  +R    + D
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALD-----IYNSFNSWGLLDNAVHDRFHFISGD 55

Query: 66  LNDPESFDAAIAGCAGVIHVAAPIDI-DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRF 124
           + D    +  +  C  V H+AA I I           +  V GT+ +L++       KR 
Sbjct: 56  VRDASEVEYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLY-RKRV 114

Query: 125 VYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS-YVLTKTLTERAALEFAEEHG 183
           V+TS+ S VY + +DV  +DE       YI K     +S Y  +K   +R A  +    G
Sbjct: 115 VHTST-SEVYGTAQDV-PIDED--HPLLYINK----PRSPYSASKQGADRLAYSYGRSFG 166

Query: 184 LDLVTLIPSF 193
           L  VT+I  F
Sbjct: 167 LP-VTIIRPF 175

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 75.2 bits (185), Expect = 3e-15
 Identities = 69/255 (27%), Positives = 99/255 (38%), Gaps = 50/255 (19%)

Query: 10  VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK----DLSFLTNLPGASERLQ----- 60
           VTGG GF+G  +I  LL+             E K+    D +F   L    E+ Q     
Sbjct: 4   VTGGGGFLGQHIIRLLLER----------KEELKEIRVLDKAFGPELIEHFEKSQGKTYV 53

Query: 61  -IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG 119
                D+ D      A  G + VIH AA +D+ G    E + +  VNGT  +L++C+++ 
Sbjct: 54  TDIEGDIKDLSFLFRACQGVSVVIHTAAIVDVFGPPNYEELEEVNVNGTQAVLEACVQNN 113

Query: 120 TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALE-- 177
            VKR VYTSS      + K        F   ED     D     Y  +K L E   L   
Sbjct: 114 -VKRLVYTSSIEVAGPNFKG----RPIFNGVED-TPYEDTSTPPYASSKLLAENIVLNAN 167

Query: 178 -FAEEHGLDLVT--LIPSFVVG---PFI------CPKFAGSVRSTLAMVLGNREEYSILL 225
               + G  LVT  L P ++ G    F+           G +   +     N        
Sbjct: 168 GAPLKQGGYLVTCALRPMYIYGEGSHFLTEIFDFLLTNNGWLFPRIKGSGVN-------- 219

Query: 226 NISMVHIDDVARAHI 240
              +V++ +VA AHI
Sbjct: 220 --PLVYVGNVAWAHI 232

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 70.8 bits (174), Expect = 4e-14
 Identities = 52/250 (20%), Positives = 82/250 (32%), Gaps = 43/250 (17%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           K+ + GGT FIG  L+  LL  G+ VT   R               P   E ++    D 
Sbjct: 2   KILIIGGTRFIGKALVEELLAAGHDVTVFNRG-----------RTKPDLPEGVEHIVGDR 50

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
           ND ++ +  + G          +D       +V         +   K     G VK++++
Sbjct: 51  NDRDALEELLGG----EDFDVVVDTIAYTPRQVER------ALDAFK-----GRVKQYIF 95

Query: 127 TSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDL 186
            SS S VY   K   ++ E+    E     L      Y   K   E       E      
Sbjct: 96  ISSAS-VY--LKPGRVITESTPLREPDAVGLSDP-WDYGRGKRAAEDVL---IEAAAFPY 148

Query: 187 VTLIPSFVVGPF-ICPKFAGSVRSTLAMVLGNREEYSIL----LNISMVHIDDVARAHIF 241
             + P ++ GP     + A          L       +       +  +H+ D+ARA + 
Sbjct: 149 TIVRPPYIYGPGDYTGRLAYFFDR-----LARGRPILVPGDGHSLVQFIHVKDLARALLG 203

Query: 242 LLEYPDAKGR 251
               P A G 
Sbjct: 204 AAGNPKAIGG 213

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 68.8 bits (169), Expect = 2e-13
 Identities = 68/271 (25%), Positives = 105/271 (38%), Gaps = 49/271 (18%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           K+ +TGGTGFIG  L  RL   G+ V    R                       I     
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVVLSRRPG------------KAEGLAEVIT---W 45

Query: 67  NDPESFDAAIAGCAGVIHVA-APIDIDGKETE----EVMTQRAVNGTIGILKSCLKSGT- 120
           +        + G   VI++A  PI    + TE    E+++ R +  T  ++++   +   
Sbjct: 46  DGLSLGPWELPGADAVINLAGEPIA-CRRWTEANKKEILSSR-IESTRVLVEAIANAPAP 103

Query: 121 VKRFVYTSSGSTV-YFSGKDVDMLDETFWSDEDYIRKL-DIWGKSYVLTKTLTERAALEF 178
            K  +   S S V Y+     ++L E   S +D++ ++   W           E+AA   
Sbjct: 104 PKVLI---SASAVGYYGHSGDEVLTENSPSGKDFLAEVCKAW-----------EKAAQP- 148

Query: 179 AEEHGLDLVTLIPSFVVGPF--ICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVA 236
           A E G  +V L    V+GP     PK     R  L   LG+  ++     +S +HIDD+ 
Sbjct: 149 ASELGTRVVILRTGVVLGPDGGALPKMLLPFRLGLGGPLGSGRQW-----MSWIHIDDLV 203

Query: 237 RAHIFLLEYPDAKGRYICSSAKLTIQEMAEF 267
           R   F +E PD  G     +        AEF
Sbjct: 204 RLIEFAIENPDLSGPVNAVAPNPV--TNAEF 232

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 65.7 bits (161), Expect = 2e-12
 Identities = 60/254 (23%), Positives = 91/254 (35%), Gaps = 35/254 (13%)

Query: 10  VTGGTGFIGSWLIMRLLD--HGYFVTTTVRS----DPEHKKDLSFLTNLPG----ASERL 59
           +TG TGF+G  L+ +LL       +   VR+        +     L         A ER+
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60

Query: 60  QIFNADLNDP------ESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILK 113
                DL++P      E F         +IH AA ++    E    +    V GT  +L+
Sbjct: 61  IPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFV--EPYSDLRATNVLGTREVLR 118

Query: 114 SCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWS-DEDYIRKLDIWGKSYVLTKTLTE 172
              K      F + S+    Y +G+   +L+E  +  DED    L      Y  +K L E
Sbjct: 119 LA-KQMKKLPFHHVSTA---YVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSKWLAE 174

Query: 173 RAALEFAEEHGLDLVTLIPSFVVG---PFICPKFAGSVRSTLAMVLGNREEYSILLN--- 226
           +   E A   GL +V   PS + G              R  L            +L    
Sbjct: 175 QLVREAAG--GLPVVIYRPSIITGESRTGWINGDDFGPRGLLGGAG--LGVLPDILGDPD 230

Query: 227 --ISMVHIDDVARA 238
             + +V +D VA A
Sbjct: 231 ARLDLVPVDYVANA 244

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 64.2 bits (157), Expect = 5e-12
 Identities = 59/277 (21%), Positives = 96/277 (34%), Gaps = 75/277 (27%)

Query: 10  VTGGTGFIGSWLIMRLLDHGYFVTTTVRS---DPEHKKDLSFLTNLPGASERLQIFNADL 66
           V G TG  G  ++  LL    F    VR+   DP        L     A+  +++   DL
Sbjct: 3   VFGATGKQGGSVVRALLKDPGF---KVRALTRDPS-SPAAKAL-----AAPGVEVVQGDL 53

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
           +DPES +AA+ G  GV  V       G E E             ++ +  ++G V+ FV+
Sbjct: 54  DDPESLEAALKGVYGVFLV-TDFWEAGGEDEIAQ-------GKNVVDAAKRAG-VQHFVF 104

Query: 127 TS-------SGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFA 179
           +S       + +  +F  K            E+YIR   +           T        
Sbjct: 105 SSVPDVEKLTLAVPHFDSK---------AEVEEYIRASGL---------PAT-------- 138

Query: 180 EEHGLDLVTLIPSF----VVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDV 235
                    L P+F     + P    K       TL +VL    +      + M+ + D+
Sbjct: 139 --------ILRPAFFMENFLTPPAPQKM---EDGTLTLVLPLDPD----TKLPMIDVADI 183

Query: 236 AR-AHIFLLEYPDAKGRYI-CSSAKLTIQEMAEFLSA 270
                    +     G+ I  +  +LT +E+A   S 
Sbjct: 184 GPAVAAIFKDPAKFNGKTIELAGDELTPEEIAAAFSK 220

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 64.6 bits (158), Expect = 7e-12
 Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 16/140 (11%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSF-----LTNLPGA-SERLQI 61
           V VTG  GFIGS L+  L+  GY V   V  +       SF     L   P    +++++
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVLYN-------SFNSWGWLDTSPPEVKDKIEV 53

Query: 62  FNADLNDPESFDAAIAGCAGVIHVAAPIDID-GKETEEVMTQRAVNGTIGILKSCLKSGT 120
              D+ DP+S   A+ GC  V H+AA I I       +      V GT+ +L++    G 
Sbjct: 54  VTGDIRDPDSVRKAMKGCDVVFHLAALIAIPYSYIAPDSYVDTNVTGTLNVLQAARDLG- 112

Query: 121 VKRFVYTSSGSTVYFSGKDV 140
           V++ V+TS+ S VY + + V
Sbjct: 113 VEKVVHTST-SEVYGTAQYV 131

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 64.5 bits (158), Expect = 9e-12
 Identities = 69/276 (25%), Positives = 113/276 (40%), Gaps = 71/276 (25%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTT---VRSDPEHKKDLSFLTNLPGASERLQIFN 63
           KV VTGG G+IGS  ++ LL+ GY V           E                R++ + 
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSNGHREALP--------RIEKIRIEFYE 52

Query: 64  ADLNDPESFDAAIAGCA--GVIHVAAPIDIDGKETEEVMTQRAVN--GTIGILKSCLKSG 119
            D+ D  + D   A      VIH AA   + G+  ++ +     N  GT+ +L++    G
Sbjct: 53  GDIRDRAALDKVFAEHKIDAVIHFAALKAV-GESVQKPLKYYDNNVVGTLNLLEAMRAHG 111

Query: 120 TVKRFVYTSSGSTVYFSGKDVDML--DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALE 177
            VK FV++SS   VY  G + + +   E     E  +   + +G+    TK + E+   +
Sbjct: 112 -VKNFVFSSSA-AVY--G-EPETVPITE-----EAPLNPTNPYGR----TKLMVEQILRD 157

Query: 178 FAEEHGLDLVTL--------IPSFVVG----------PFICPKFAGSVRSTLAMVLGN-- 217
            A+  GL+ V L         PS ++G          P++  + A   R  L  + G+  
Sbjct: 158 LAKAPGLNYVILRYFNPAGAHPSGLIGEDPQIPNNLIPYVL-QVALGRREKL-AIFGDDY 215

Query: 218 --------REEYSILLNISMVHIDDVARAHIFLLEY 245
                   R +Y        +H+ D+A AH+  LE 
Sbjct: 216 PTPDGTCVR-DY--------IHVVDLADAHVLALEK 242

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 61.2 bits (149), Expect = 3e-11
 Identities = 46/236 (19%), Positives = 65/236 (27%), Gaps = 56/236 (23%)

Query: 10  VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP 69
           V G TG  G  L+  LL  G+ VT   R+                 +  +     DL D 
Sbjct: 3   VIGATGKTGRRLVKELLARGHQVTALSRNPS------------KAPAPGVTPVQKDLFDL 50

Query: 70  ESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS 129
                A+AG   V+        D              G   +L +  ++G V+R V  S+
Sbjct: 51  ADLAEALAGVDAVVDAFGARPDDSD------------GVKHLLDAAARAG-VRRIVVVSA 97

Query: 130 GSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTL 189
              +Y        LD+          K                 AA E     GLD   +
Sbjct: 98  AG-LYRDEPGTFRLDDAPLFPPYARAK----------------AAAEELLRASGLDWTIV 140

Query: 190 IPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEY 245
            P                  T  +              S +   DVA A +  LE 
Sbjct: 141 RPGA---------LFDEEGETYEIGTEGDPA-----GESSISRADVAAALLDELEN 182

Length = 182

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 61.5 bits (149), Expect = 7e-11
 Identities = 61/268 (22%), Positives = 90/268 (33%), Gaps = 55/268 (20%)

Query: 6   GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNAD 65
            K+ VTG TGF+G  ++  LL  G+ V   VR +PE    L+      G    L     D
Sbjct: 1   MKILVTGATGFVGGAVVRELLARGHEVRAAVR-NPEAAAALA-----GGVEVVL----GD 50

Query: 66  LNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFV 125
           L DP+S  A   G  GV+ ++  +D              V   +   ++      VK  V
Sbjct: 51  LRDPKSLVAGAKGVDGVLLISGLLDGSDAF-----RAVQVTAVVRAAEAAGAG--VKHGV 103

Query: 126 YTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFA-EEHGL 184
             S              L     S     R                 +AA+E A    G+
Sbjct: 104 SLSV-------------LGADAASPSALAR----------------AKAAVEAALRSSGI 134

Query: 185 DLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLE 244
              TL  +          F  +  +    V+           +S + +DDVA A    L+
Sbjct: 135 PYTTLRRAAFYLGAGAA-FIEAAEAAGLPVIPRGI-----GRLSPIAVDDVAEALAAALD 188

Query: 245 YPDAKGR--YICSSAKLTIQEMAEFLSA 270
            P   GR   +     LT+ E+A  L  
Sbjct: 189 APATAGRTYELAGPEALTLAELASGLDY 216

Length = 275

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 60.9 bits (148), Expect = 2e-10
 Identities = 59/274 (21%), Positives = 96/274 (35%), Gaps = 37/274 (13%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYF-VTTTVR-SDPEHKKDLSFLTNLPG-------ASE 57
            V +TG TGF+G++L++ LLD     V   VR    E                    +++
Sbjct: 2   NVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALA-RLEKTFDLYRHWDELSAD 60

Query: 58  RLQIFNADLNDPE-SFDAA----IAGCAG-VIHVAAPIDIDGKETEEVMTQRAVN--GTI 109
           R+++   DL +P+          +A     +IH AA ++     +E     R  N  GT 
Sbjct: 61  RVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYSE----LRGANVLGTA 116

Query: 110 GILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKT 169
            +L+    +G  K   Y SS S      +        F                Y  +K 
Sbjct: 117 EVLRLAA-TGKPKPLHYVSSISV--GETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKW 173

Query: 170 LTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGS------VRSTLAMVLGNREEYSI 223
           + E+   E A + GL +    P ++ G                V   L + +    EYS 
Sbjct: 174 VAEKLVRE-AGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSEYS- 231

Query: 224 LLNISMVHIDDVARAHIFLLEYP-DAKGRYICSS 256
              + M+ +D VARA +       +A       S
Sbjct: 232 ---LDMLPVDHVARAVVAPSVQVAEAIAALGAHS 262

Length = 382

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 58.6 bits (142), Expect = 2e-10
 Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 15/124 (12%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           + + G TGFIG  L   LL+ G+ VT  VR+    +                 +   DL 
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRN--TKRLSKEDQEP------VAVVE-GDLR 51

Query: 68  DPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYT 127
           D +S   A+ G   VIH+A     D ++  EV     V GT  +L++  K   VK F++ 
Sbjct: 52  DLDSLSDAVQGVDVVIHLAGA-PRDTRDFCEVD----VEGTRNVLEAA-KEAGVKHFIFI 105

Query: 128 SSGS 131
           SS  
Sbjct: 106 SSLG 109

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 59.7 bits (145), Expect = 4e-10
 Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 25/139 (17%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTT---TVRSDPEHKKDLSFLTNLPGASERLQIFN 63
           K+ VTGG G+IGS  + +LL+ G+ V           E       +T +           
Sbjct: 1   KILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRGERITPVT-------FVE 53

Query: 64  ADLNDPESFDAAIAGCA--GVIHVAAPIDIDGKETEEVMTQRA------VNGTIGILKSC 115
            DL D E  D          VIH A  I +      E + +        V GT+ +L++ 
Sbjct: 54  GDLRDRELLDRLFEEHKIDAVIHFAGLIAV-----GESVQKPLKYYRNNVVGTLNLLEAM 108

Query: 116 LKSGTVKRFVYTSSGSTVY 134
            ++G VK+F+++SS + VY
Sbjct: 109 QQAG-VKKFIFSSS-AAVY 125

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score = 59.4 bits (144), Expect = 5e-10
 Identities = 72/262 (27%), Positives = 113/262 (43%), Gaps = 38/262 (14%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
            V +TGG G+ G  L   L   G  V       P+          LP   E ++   AD+
Sbjct: 1   SVLITGGGGYFGFRLGCALAKSGVHVILFDIRRPQQ--------ELP---EGIKFIQADV 49

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKE--TEEVMTQRAVNGTIGILKSCLKSGTVKRF 124
            D    + A+AG   V H+A+   + G+E    E++ +  V GT  I++ C++   V R 
Sbjct: 50  RDLSQLEKAVAGVDCVFHIAS-YGMSGREQLNRELIEEINVRGTENIIQVCVRR-RVPRL 107

Query: 125 VYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGL 184
           +YTS+   V F G+ +   DE+      Y+  LD+    Y  TK++ E+  L+ A    L
Sbjct: 108 IYTST-FNVIFGGQPIRNGDESL----PYL-PLDLHVDHYSRTKSIAEQLVLK-ANNMPL 160

Query: 185 D-----LVT--LIPSFVVGP---FICPKFAGSVRSTLAM-VLGNREEYSILLNISMVHID 233
                 L T  L P+ + GP      P+    +   L M V G+ +       +  VH+D
Sbjct: 161 PNNGGVLRTCALRPAGIYGPGEQRHLPRIVSYIEKGLFMFVYGDPK-----SLVEFVHVD 215

Query: 234 DVARAHIFLLEYPDAKGRYICS 255
           ++ +AHI   E       YI S
Sbjct: 216 NLVQAHILAAEALTTAKGYIAS 237

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 58.5 bits (142), Expect = 9e-10
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 20/134 (14%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVT------TTVRSDPEHKKDLSFLTNLPGASERLQI 61
           + VTGG GFIGS L+ RLL+ G  V       +  R + E + +          ++  + 
Sbjct: 2   ILVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFE----------NKAFRF 51

Query: 62  FNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETE-EVMTQRAVNGTIGILKSCLKSGT 120
              DL D     A       V H+AA  D+    T+ ++  +  V  T  +L++   +G 
Sbjct: 52  VKRDLLDTADKVAKK-DGDTVFHLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANG- 109

Query: 121 VKRFVYTSSGSTVY 134
           VKR V+ SS STVY
Sbjct: 110 VKRIVFASS-STVY 122

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 58.4 bits (142), Expect = 1e-09
 Identities = 66/282 (23%), Positives = 102/282 (36%), Gaps = 49/282 (17%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTN----LPGASERLQIF 62
           +  +TG TG  GS+L   LL+ GY V   VR      +  SF T+    L    +R+ + 
Sbjct: 1   RALITGITGQDGSYLAEFLLEKGYEVHGIVR------RSSSFNTDRIDHLYINKDRITLH 54

Query: 63  NADLNDPESFDAAIA--------GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKS 114
             DL D  S   AI           A   HV    D   + T EV       GT+ +L+ 
Sbjct: 55  YGDLTDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDP-EYTAEV----NAVGTLNLLE- 108

Query: 115 CLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS-YVLTKTLTER 173
            ++   +    Y +S S  Y  GK    + E   S+    R      +S Y ++K   + 
Sbjct: 109 AIRILGLDARFYQASSSEEY--GK----VQELPQSETTPFR-----PRSPYAVSKLYADW 157

Query: 174 AALEFAEEHGLDLVTLIPSFVVGP-----FICPKFAGSVRSTLAMVLGNREEYSILLNIS 228
               + E +GL  V        GP     F+  K     R    +  G +     L N+ 
Sbjct: 158 ITRNYREAYGLFAVNGRLFNHEGPRRGETFVTRKIT---RQVARIKAGLQPVLK-LGNLD 213

Query: 229 MV----HIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAE 266
                    D   A+  LL+  +     I +    +++E  E
Sbjct: 214 AKRDWGDARDYVEAYWLLLQQGEPDDYVIATGETHSVREFVE 255

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 57.8 bits (140), Expect = 2e-09
 Identities = 64/314 (20%), Positives = 108/314 (34%), Gaps = 67/314 (21%)

Query: 7   KVCVTGGTGFIGSWLIMRLLD--HGYFVTTTVR-SDPEHKKD-------LSFLTNLPGAS 56
            V +TG TGF+G++L+  LL       V   VR +  EH  +          L +   A 
Sbjct: 1   TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWHEDLAR 60

Query: 57  ERLQIFNADLNDP-------------ESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQR 103
           ER+++   DL++P             E+ D  +     +++   P              R
Sbjct: 61  ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHN-GALVNWVYPYS----------ELR 109

Query: 104 AVN--GTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG 161
             N  GT  +L+    SG  K   Y S+ S     G  +D+   T   D+  +       
Sbjct: 110 GANVLGTREVLRLAA-SGRAKPLHYVSTISV----GAAIDLSTVTE--DDATVTPPPGLA 162

Query: 162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGP----------FICPKFAGSVRSTL 211
             Y  +K + E    E A + GL +  + P  ++G            +     G +    
Sbjct: 163 GGYAQSKWVAELLVRE-ASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLA-LG 220

Query: 212 AMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYIC----SSAKLTIQEMAEF 267
           A            L   +  +D VARA + L   P A          +   +++ E  ++
Sbjct: 221 AYPQSPE------LTEDLTPVDFVARAIVVLSSRPAASAGGPVFHVVNPEPVSLDEFLDW 274

Query: 268 LSAKHPEYPIPNVD 281
           L      Y +  V 
Sbjct: 275 LERA--GYNLRLVS 286

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 56.5 bits (137), Expect = 4e-09
 Identities = 73/291 (25%), Positives = 113/291 (38%), Gaps = 64/291 (21%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           + +TGGTGFIG  L  RL   G+ VT   RS P                        D +
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTKWEGYK--------PWAGEDAD 52

Query: 68  DPESFDAAIAGCAGVIHVA-APIDIDGKETEE----VMTQRAVNGT---IGILKSCLKSG 119
             E  DA       VI++A  PI  D + TEE    +   R ++ T   +  + +  +  
Sbjct: 53  SLEGADA-------VINLAGEPI-ADKRWTEERKQEIRDSR-IDTTRLLVEAIAAAEQKP 103

Query: 120 TVKRFVYTSSGSTVYFSGKDVD--MLDETFWSDEDYIRKL-DIWGKSYVLTKTLTERAAL 176
            V  F+   S S V + G   D    +E   + +D++ +L   W           E AA 
Sbjct: 104 KV--FI---SASAVGYYGPSEDREYTEEDSPAGDDFLAELCRDW-----------EEAAQ 147

Query: 177 EFAEEHGLDLVTLIPSFVVGP-------FICPKFAGSVRSTLAMVLGNREEYSILLNISM 229
             AE+ G  +V L    V+GP        + P   G     L   LG+  ++      S 
Sbjct: 148 A-AEDLGTRVVLLRTGIVLGPKGGALAKMLLPFRLG-----LGGPLGSGRQW-----FSW 196

Query: 230 VHIDDVARAHIFLLEYPDAKGRYICSSAK-LTIQEMAEFL-SAKHPEYPIP 278
           +HI+D+ +  +F LE     G    ++ + +  +E A+ L  A H     P
Sbjct: 197 IHIEDLVQLILFALENASVSGPVNATAPEPVRNKEFAKALARALHRPAFFP 247

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 56.7 bits (137), Expect = 4e-09
 Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 24/185 (12%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           +  VTG  GFIGS L  RL   G++V       PEH             ++  +    DL
Sbjct: 2   RALVTGAGGFIGSHLAERLKAEGHYVRGADWKSPEHMTQP---------TDDDEFHLVDL 52

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIG--ILKSCLKSGTVKRF 124
            + E+   A  G   V H+AA +   G            N  I   +L++   +G V+RF
Sbjct: 53  REMENCLKATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARING-VERF 111

Query: 125 VYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW----GKSYVLTKTLTERAALEFAE 180
           ++ SS + VY   K ++       +    +R+ D W      +Y   K  TER    + E
Sbjct: 112 LFASS-ACVYPEFKQLE-------TTVVRLREEDAWPAEPQDAYGWEKLATERLCQHYNE 163

Query: 181 EHGLD 185
           ++G++
Sbjct: 164 DYGIE 168

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 56.2 bits (136), Expect = 5e-09
 Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 20/125 (16%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           V VTG TG++G  L+ RLL  G+ V   VRS    K     L + P  SER+ +   DL 
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRALVRS--PEK-----LADRP-WSERVTVVRGDLE 52

Query: 68  DPESFDAAIAGCAGV---IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRF 124
           DPES  AA+ G       +H        G + EE   + A N      ++   +G VKR 
Sbjct: 53  DPESLRAALEGIDTAYYLVHSMGS----GGDFEEADRRAARN----FARAARAAG-VKRI 103

Query: 125 VYTSS 129
           +Y   
Sbjct: 104 IYLGG 108

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 55.7 bits (135), Expect = 8e-09
 Identities = 73/283 (25%), Positives = 116/283 (40%), Gaps = 49/283 (17%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSF-LTNLPGASERLQIFNADL 66
           + +TGGTG IG  L  RL   G+ VT   R  P+  ++L   +T   G ++ L       
Sbjct: 1   ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWEGLADAL------- 53

Query: 67  NDPESFDAAIAGCAGVIHVA-API---DIDGKETEEVMTQRAVNGTIGILKSCLKSGT-V 121
                 DA       VI++A  PI       K+ EE+   R +N T  +++    S T  
Sbjct: 54  --TLGIDA-------VINLAGEPIAERRWTEKQKEEIRQSR-INTTEKLVELIAASETKP 103

Query: 122 KRFVYTSSGSTVYFSGKDVDM-LDETFWSDEDYIRKL-DIWGKSYVLTKTLTERAALEFA 179
           K  +   S S V + G   D  + E     +D++ +L   W           E  AL+ A
Sbjct: 104 KVLI---SASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDW-----------EEEALQ-A 148

Query: 180 EEHGLDLVTLIPSFVVGPF--ICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVAR 237
           ++ G  +V L    V+ P      K     +  L   LG+  ++      S +HI+D+  
Sbjct: 149 QQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQW-----FSWIHIEDLVN 203

Query: 238 AHIFLLEYPDAKGRYICSSAK-LTIQEMAEFLS-AKHPEYPIP 278
           A +FLLE     G +  ++   +  +E A  L  A H    +P
Sbjct: 204 AILFLLENEQLSGPFNLTAPNPVRNKEFAHALGRALHRPAILP 246

Length = 297

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 73/315 (23%), Positives = 128/315 (40%), Gaps = 51/315 (16%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNAD 65
           K+ +TG TG +G  L+  L + GY V  T RS     K D   LT+     E ++ +  D
Sbjct: 1   KILITGATGMLGRALVRLLKERGYEVIGTGRSRASLFKLD---LTDPDAVEEAIRDYKPD 57

Query: 66  LNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVN--GTIGILKSCLKSGTVKR 123
           +               +I+ AA   +D  E++  +  R VN      + ++  + G   R
Sbjct: 58  V---------------IINCAAYTRVDKCESDPELAYR-VNVLAPENLARAAKEVGA--R 99

Query: 124 FVYTSSGSTVY-FSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH 182
            ++ S+    Y F GK      +  + +ED    L+++GKS    K L E A L     +
Sbjct: 100 LIHISTD---YVFDGK------KGPYKEEDAPNPLNVYGKS----KLLGEVAVLNANPRY 146

Query: 183 GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNI--SMVHIDDVARAHI 240
               + L  S++ G     +    V   L +    R+E +++ +   S  +  D+A A +
Sbjct: 147 ----LILRTSWLYGELKNGE--NFVEWMLRL-AAERKEVNVVHDQIGSPTYAADLADAIL 199

Query: 241 FLLEYPDAKGRY-ICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL 299
            L+E     G Y + +S  ++  E A+ + A     P   +  ++  E Y L A      
Sbjct: 200 ELIERNSLTGIYHLSNSGPISKYEFAKLI-ADALGLPDVEIKPITSSE-YPLPARRPANS 257

Query: 300 -LDICFTYKYGIDEM 313
            LD     + G  + 
Sbjct: 258 SLDCSKLEELGGIKP 272

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 53.7 bits (130), Expect = 3e-08
 Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 19/134 (14%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQI--FNA 64
           KV VTGG G+IGS  + +LL  G+ V   V  D     +LS       A  +LQ   +  
Sbjct: 2   KVLVTGGAGYIGSHTVRQLLKTGHEV---VVLD-----NLS--NGHKIALLKLQFKFYEG 51

Query: 65  DLNDPESFDAAIA--GCAGVIHVAAPIDIDGKETEEVMT--QRAVNGTIGILKSCLKSGT 120
           DL D     A         V+H AA I + G+  +  +      V GT+ ++++ L++G 
Sbjct: 52  DLLDRALLTAVFEENKIDAVVHFAASISV-GESVQNPLKYYDNNVVGTLNLIEAMLQTG- 109

Query: 121 VKRFVYTSSGSTVY 134
           VK+F+++S+ + VY
Sbjct: 110 VKKFIFSST-AAVY 122

Length = 329

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 53.0 bits (128), Expect = 4e-08
 Identities = 36/153 (23%), Positives = 60/153 (39%), Gaps = 30/153 (19%)

Query: 10  VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP 69
           VTG TG +G+ ++  LL     V   VR +PE  K  +      G     ++   D +DP
Sbjct: 3   VTGATGKLGTAVVELLLAKVASVVALVR-NPEKAKAFAA----DGV----EVRQGDYDDP 53

Query: 70  ESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS 129
           E+ + A  G   ++ ++     D      +   +        + +  ++G VK  VY S 
Sbjct: 54  ETLERAFEGVDRLLLISPSDLED-----RIQQHKNF------IDAAKQAG-VKHIVYLS- 100

Query: 130 GSTVYFSGKDVD---MLDETFWSDEDYIRKLDI 159
                 SG D D   +L     + E Y+    I
Sbjct: 101 -----ASGADEDSPFLLARDHGATEKYLEASGI 128

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 52.9 bits (128), Expect = 6e-08
 Identities = 56/217 (25%), Positives = 82/217 (37%), Gaps = 44/217 (20%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTV------RSDPEHKKDLSFLTNLPGASERLQ 60
           K+ VTGG GFIGS  +  LL+                 + E+ +D+S       +S R +
Sbjct: 2   KILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDVS-------SSPRYR 54

Query: 61  IFNADLNDPESFDAAIA--GCAGVIHVAAPIDIDGKETE-EVMTQRAVNGTIGILKSCLK 117
               D+ D E  D          VIH AA   +D   ++ E   +  V GT  +L++  K
Sbjct: 55  FVKGDICDAELVDRLFEEEKIDAVIHFAAESHVDRSISDPEPFIRTNVLGTYTLLEAARK 114

Query: 118 SGTVKRFVYTSSGST--VYFSGKDVDMLDETFWSDEDYIRKLDIWGKS----YVLTKTLT 171
            G VKRFV+    ST  VY    D     ET                +    Y  +K   
Sbjct: 115 YG-VKRFVHI---STDEVYGDLLDDGEFTET-------------SPLAPTSPYSASKAAA 157

Query: 172 ERAALEFAEEHGLDLVTLIPSFVVGPF-----ICPKF 203
           +     +   +GL +V    S   GP+     + P F
Sbjct: 158 DLLVRAYHRTYGLPVVITRCSNNYGPYQFPEKLIPLF 194

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 52.8 bits (127), Expect = 7e-08
 Identities = 36/129 (27%), Positives = 53/129 (41%), Gaps = 19/129 (14%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA 64
           KV +TG +GF+G  L  RLL       +       P+           P  + R+     
Sbjct: 2   KVLITGASGFVGQRLAERLLSDVPNERLILIDVVSPKA----------PSGAPRVTQIAG 51

Query: 65  DLNDPESFDAAIAG-CAGVIHVAAPID-IDGKETEEVMTQRAVN--GTIGILKSCLKSGT 120
           DL  P   +A   G    V H+AA +      + +       VN  GT  +L++  K+G 
Sbjct: 52  DLAVPALIEALANGRPDVVFHLAAIVSGGAEADFDLGY---RVNVDGTRNLLEALRKNGP 108

Query: 121 VKRFVYTSS 129
             RFV+TSS
Sbjct: 109 KPRFVFTSS 117

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 56/251 (22%), Positives = 87/251 (34%), Gaps = 49/251 (19%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTT---VRSDPEH-----------KKDLSFLTNL- 52
           V +TG TGF+G  L+ +LL     +      +R                 K      NL 
Sbjct: 3   VLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRNLN 62

Query: 53  PGASERLQIFNADLNDPE----SFDA-AIAGCAG-VIHVAAPIDIDGKETEEVMTQRAVN 106
           P    ++     DL++P       D   +      +IH AA +  D  E  +      V 
Sbjct: 63  PLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATVTFD--ERLDEALSINVL 120

Query: 107 GTIGILKSCLKSGTVKRFVYTSS----------GSTVYFSGKDVDMLDETFWSDEDYIRK 156
           GT+ +L+   +   +K FV+ S+             VY    D + L +     +D +  
Sbjct: 121 GTLRLLELAKRCKKLKAFVHVSTAYVNGDRQLIEEKVYPPPADPEKLIDILELMDD-LEL 179

Query: 157 LDIWGK-------SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVG----PFICPKFAG 205
                K       +Y  TK L ER  L+      L LV + PS V      PF  P +  
Sbjct: 180 ERATPKLLGGHPNTYTFTKALAERLVLKERG--NLPLVIVRPSIVGATLKEPF--PGWID 235

Query: 206 SVRSTLAMVLG 216
           +      + L 
Sbjct: 236 NFNGPDGLFLA 246

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 25/135 (18%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           +V VTG TGF GSWL + L + G  V      DP    +L  L NL     ++     D+
Sbjct: 6   RVLVTGHTGFKGSWLSLWLQELGAKVIGYSL-DPPTNPNLFELANL---DNKISSTRGDI 61

Query: 67  NDPESFDAAIAGCAG--VIHVAA----------PIDIDGKETEEVMTQRAVNGTIGILKS 114
            D  +   AI       V H+AA          P+     ET E      V GT+ +L++
Sbjct: 62  RDLNALREAIREYEPEIVFHLAAQPLVRLSYKDPV-----ETFET----NVMGTVNLLEA 112

Query: 115 CLKSGTVKRFVYTSS 129
             ++G+VK  V  +S
Sbjct: 113 IRETGSVKAVVNVTS 127

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 49.8 bits (119), Expect = 4e-07
 Identities = 53/272 (19%), Positives = 91/272 (33%), Gaps = 59/272 (21%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
            GKV  VTG +  IG  +   L   G  V    R   E   +            R     
Sbjct: 4   SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVA 63

Query: 64  ADL-NDPESFDAAIAG-------------CAGVIHVAAPI-DIDGKETEEVMTQRAVNGT 108
           AD+ +D ES +A +A               AG+    AP+ ++  ++ + V+    + G 
Sbjct: 64  ADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVI-DVNLLGA 122

Query: 109 IGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTK 168
             + ++ L     +R V  SS + +                             +Y  +K
Sbjct: 123 FLLTRAALPLMKKQRIVNISSVAGLGGPP----------------------GQAAYAASK 160

Query: 169 ----TLTERAALEFAEEHGLDLVTLIPSFVVGPF---ICPKFAGSVRSTLAMVLGNREEY 221
                LT+  ALE A   G+ +  + P ++  P    +      +++   A +   R   
Sbjct: 161 AALIGLTKALALELA-PRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGR--- 216

Query: 222 SILLNISMVHIDDVARAHIFLLEYPDAKGRYI 253
                  +   ++VA A  FL    D    YI
Sbjct: 217 -------LGTPEEVAAAVAFLA--SDEAASYI 239

Length = 251

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 65/308 (21%), Positives = 109/308 (35%), Gaps = 66/308 (21%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           K+ +TG  G +G   + R L   + V  T R+                          D+
Sbjct: 2   KILITGANGQLG-TELRRALPGEFEVIATDRA------------------------ELDI 36

Query: 67  NDPESFDAAIAGCAG--VIHVAAPIDIDGKETEEVMTQRAVN--GTIGILKSCLKSGTVK 122
            DP++    I       VI+ AA   +D  E+E  +   AVN  G   + ++  + G   
Sbjct: 37  TDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAF-AVNATGAENLARAAAEVGA-- 93

Query: 123 RFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH 182
           R V+ S+     F G+         + + D    L+++G+S    K   E A       H
Sbjct: 94  RLVHISTDYV--FDGE-----KGGPYKETDTPNPLNVYGRS----KLAGEEAVRAAGPRH 142

Query: 183 GLDLVTLIPSFVVGPFICPK-FAGSVRSTLAMVLGNREEYSILLN--ISMVHIDDVARAH 239
               + L  S+V G +     F  ++           +E  ++ +   S  + +D+A A 
Sbjct: 143 ----LILRTSWVYGEY--GNNFVKTMLRLAKE----GKELKVVDDQYGSPTYTEDLADAI 192

Query: 240 IFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPN-VDSLSEIEGY-------KL 291
           + LLE     G Y   ++        EF  A   E  +   V        Y         
Sbjct: 193 LELLEKEKEGGVYHLVNSGEC--SWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPAN 250

Query: 292 SALSSKKL 299
           S+L +KKL
Sbjct: 251 SSLDTKKL 258

Length = 281

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 48.8 bits (117), Expect = 8e-07
 Identities = 36/140 (25%), Positives = 55/140 (39%), Gaps = 18/140 (12%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           K+ + G TG  GS ++   L  G+ VT  VR DP                E+L++   D+
Sbjct: 1   KIAIIGATGRTGSAIVREALARGHEVTALVR-DPAKLPAE---------HEKLKVVQGDV 50

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
            D E    A+ G   V      I   G   +   T     GT  I+ S +K+  VKR + 
Sbjct: 51  LDLEDVKEALEGQDAV------ISALGTRNDLSPTTLHSEGTRNIV-SAMKAAGVKRLI- 102

Query: 127 TSSGSTVYFSGKDVDMLDET 146
              G+        V ++ +T
Sbjct: 103 VVGGAGSLDDRPKVTLVLDT 122

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 49.2 bits (118), Expect = 9e-07
 Identities = 62/312 (19%), Positives = 115/312 (36%), Gaps = 63/312 (20%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTT--VR-SDPEHKKDLSFLTNLPG--------- 54
            V +TG TGF+G++L+  LL           VR  D E   +   + NL           
Sbjct: 1   TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALER-LIDNLKEYGLNLWDEL 59

Query: 55  ASERLQIFNADLNDP-------------ESFDAAIAGCAGVIHVAAPIDIDGKETEEVMT 101
              R+++   DL+ P             E  D        +IH  A  +++     E + 
Sbjct: 60  ELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDV-------IIHNGA--NVNWVYPYEELK 110

Query: 102 QRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG 161
              V GT  +LK    +G +K   + S+ S V+ + +   + DE     +D +   +   
Sbjct: 111 PANVLGTKELLKLAA-TGKLKPLHFVSTLS-VFSAEEYNALDDE---ESDDMLESQNGLP 165

Query: 162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVG----------PFICPKFAGSVRSTL 211
             Y+ +K + E+   E A   GL +  + P  + G           F      G ++  +
Sbjct: 166 NGYIQSKWVAEKLLREAANR-GLPVAIIRPGNIFGDSETGIGNTDDFFWRLLKGCLQLGI 224

Query: 212 AMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGR--YICSSAKLTIQEMAEFLS 269
             + G          + +  +D VARA + L      +    ++ +   +++ ++ + L 
Sbjct: 225 YPISGA--------PLDLSPVDWVARAIVKLALNESNEFSIYHLLNPPLISLNDLLDALE 276

Query: 270 AKHPEYPIPNVD 281
            K   Y I  V 
Sbjct: 277 EK--GYSIKEVS 286

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 27/136 (19%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTT-----TVRSDPEHKKDLSFLTNLPGASERLQI 61
           ++ +TGG GF+GS L  RLL+ G+ V       T R     K+++  L   P      + 
Sbjct: 2   RILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGR-----KRNIEHLIGHP----NFEF 52

Query: 62  FNADLNDPE--SFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRA-VNGTIGILKSCLKS 118
              D+ +P     D        + H+A P      +   + T +  V GT+ +L    + 
Sbjct: 53  IRHDVTEPLYLEVDQ-------IYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRV 105

Query: 119 GTVKRFVYTSSGSTVY 134
           G   R +  S+ S VY
Sbjct: 106 GA--RVLLAST-SEVY 118

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase

 Score = 49.0 bits (117), Expect = 1e-06
 Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 25/202 (12%)

Query: 3   EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIF 62
            +K ++C+TG  GFI S +  RL   G+++  +     EH  +  F           +  
Sbjct: 19  SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCH---------EFH 69

Query: 63  NADLNDPESFDAAIAGCAGVIHVAAPIDIDG----KETEEVMTQRAVNGTIGILKSCLKS 118
             DL   E+      G   V ++AA  D+ G    +    V+       +  +L++   +
Sbjct: 70  LVDLRVMENCLKVTKGVDHVFNLAA--DMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN 127

Query: 119 GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEF 178
           G VKRF Y SS + +Y   K ++       SD       D +G    L K  TE     +
Sbjct: 128 G-VKRFFYASS-ACIYPEFKQLETNVSLKESDAWPAEPQDAYG----LEKLATEELCKHY 181

Query: 179 AEEHGLDLVTLIPSF--VVGPF 198
            ++ G++    I  F  + GPF
Sbjct: 182 TKDFGIE--CRIGRFHNIYGPF 201

Length = 370

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 37/158 (23%), Positives = 56/158 (35%), Gaps = 41/158 (25%)

Query: 10  VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP 69
           +TG +  IG  L + L   GY V  T R +P+  + L  L N       L     D+ D 
Sbjct: 5   ITGCSSGIGLALALALAAQGYRVIATAR-NPDKLESLGELLNDNLEVLEL-----DVTDE 58

Query: 70  ESFDAAIAG-------------CAGVIHVAAPIDIDGKETEEVMTQRAVN--GTIGILKS 114
           ES  AA+                AG        +   +E  E+     VN  G + + ++
Sbjct: 59  ESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELF---EVNVFGPLRVTRA 115

Query: 115 CL------KSGTVKRFVYTSSGSTV--------YFSGK 138
            L       SG +   V  SS + +        Y + K
Sbjct: 116 FLPLMRKQGSGRI---VNVSSVAGLVPTPFLGPYCASK 150

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 63/267 (23%), Positives = 86/267 (32%), Gaps = 59/267 (22%)

Query: 10  VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP 69
           VTG TG IGS +   LL+ G  V   VR   E    L+      GA    ++   DL+DP
Sbjct: 3   VTGATGRIGSKVATTLLEAGRPVRALVR-SDERAAALAAR----GA----EVVVGDLDDP 53

Query: 70  ESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS 129
               AA+AG   V    AP             +           S L+   VKR V  SS
Sbjct: 54  AVLAAALAGVDAV-FFLAPPAPT------ADARPGYVQAAEAFASALREAGVKRVVNLSS 106

Query: 130 GSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTL 189
                 S      L    W                     L E+         GL +V L
Sbjct: 107 VGADPESPSG---LIRGHW---------------------LMEQV----LNWAGLPVVHL 138

Query: 190 IPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL---LNISMVHIDDVARAHIFLLEYP 246
            P++         F  ++ S    +               +  +  DD+AR    LL  P
Sbjct: 139 RPAW---------FMENLLSQAPSIRKAGVLALPFPGDGRLPPIATDDIARVAAKLLLDP 189

Query: 247 DAKG---RYICSSAKLTIQEMAEFLSA 270
           +  G     +     LT+ E+A  LS 
Sbjct: 190 EWHGHRVYELTGPEDLTMNEIAAALSR 216

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 46.5 bits (111), Expect = 5e-06
 Identities = 39/155 (25%), Positives = 61/155 (39%), Gaps = 23/155 (14%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           + V G TG+ G  ++   L  G+ V   VR DP+ +   S      G     ++   DL+
Sbjct: 1   ILVFGATGYQGGSVVRASLKAGHPVRALVR-DPKSELAKSLKAA--GV----ELVEGDLD 53

Query: 68  DPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYT 127
           D ES   A+ G   V  V          ++E+   +       +  +  ++G VK F+ +
Sbjct: 54  DHESLVEALKGVDVVFSV-----TGFWLSKEIEDGKK------LADAAKEAG-VKHFIPS 101

Query: 128 SSGSTVYFSGKD---VDMLDETFWSDEDYIRKLDI 159
             G+ V  S      V   D      E YIR L I
Sbjct: 102 EFGNDVDRSNGVEPAVPHFDSKA-EVERYIRALGI 135

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 18/143 (12%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTT---VRSDPE---HKKDLSFLTNLPGASERLQI 61
           + VTGG G+IGS  +++LL  GY V        S  E     K+L          + L  
Sbjct: 8   ILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKEL-----AGDLGDNLVF 62

Query: 62  FNADLNDPESFDAAIAGCA--GVIHVAAPIDIDGKETEEVMTQRAVN--GTIGILKSCLK 117
              DL D E+ +   A      VIH A  +   G+   + +     N  GTI +L+   K
Sbjct: 63  HKVDLRDKEALEKVFASTRFDAVIHFAG-LKAVGESVAKPLLYYDNNLVGTINLLEVMAK 121

Query: 118 SGTVKRFVYTSSGSTVYFSGKDV 140
            G  K+ V++SS +TVY   ++V
Sbjct: 122 HG-CKKLVFSSS-ATVYGQPEEV 142

Length = 352

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 46.2 bits (110), Expect = 7e-06
 Identities = 65/292 (22%), Positives = 96/292 (32%), Gaps = 65/292 (22%)

Query: 13  GTGFIGSWLIMRLLDHGYFVTTTVRS-DPEHKKDLSFLTNLPGASERLQIFNADLNDP-E 70
           G G++G  L  +LL  G+ VT T RS +       + +T L           ADL  P  
Sbjct: 5   GCGYLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAGVTPL----------AADLTQPGL 54

Query: 71  SFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSS 129
             D        VI +  P        +  +           L   L     V+R +Y SS
Sbjct: 55  LADVDHL----VISLPPPAGSYRGGYDPGLRA---------LLDALAQLPAVQRVIYLSS 101

Query: 130 GSTVY--FSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERA-ALEFAEEHGLDL 186
            + VY    G+         W DE                   TE   AL  AE+  L L
Sbjct: 102 -TGVYGDQQGE---------WVDETS------------PPNPSTESGRALLEAEQALLAL 139

Query: 187 ----VTLI-PSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIF 241
                T++  + + GP             LA   G     +   N   +H+DD+  A  F
Sbjct: 140 GSKPTTILRLAGIYGPGR------HPLRRLAQGTGRPPAGNAPTN--RIHVDDLVGALAF 191

Query: 242 LLEYPDAKGRY-ICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLS 292
            L+ P     Y +     +T  E  +  +      P P +      EG ++S
Sbjct: 192 ALQRPAPGPVYNVVDDLPVTRGEFYQAAAELLGLPPPPFIPFAFLREGKRVS 243

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 59/251 (23%), Positives = 83/251 (33%), Gaps = 49/251 (19%)

Query: 10  VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP 69
           V G +G IG  +   L   G+ V    RS        S L  LPG     +I  AD  D 
Sbjct: 4   VLGASGPIGREVARELRRRGWDVRLVSRS-------GSKLAWLPGV----EIVAADAMDA 52

Query: 70  ESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS 129
            S  AA  G   + H A P     +E    + +        ++ +   +G   + V    
Sbjct: 53  SSVIAAARGADVIYHCANPAYTRWEELFPPLME-------NVVAAAEANG--AKLVLP-- 101

Query: 130 GSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALE--FAEEHGLDLV 187
              VY  G             ED   +          T+    RA +E      H     
Sbjct: 102 -GNVYMYGPQAGSP-----ITEDTPFQ--------PTTRKGRIRAEMEERLLAAHAKG-- 145

Query: 188 TLIPSFVV--GPFICPKFAGSV-RSTLAMVLGNREEYSILLNISMVH----IDDVARAHI 240
             I + +V    F  P    S   + L  +L  +       N+   H    + DVARA +
Sbjct: 146 -DIRALIVRAPDFYGPGAINSWLGAALFAILQGK-TAVFPGNLDTPHEWTYLPDVARALV 203

Query: 241 FLLEYPDAKGR 251
            L E PDA G 
Sbjct: 204 TLAEEPDAFGE 214

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 44.0 bits (105), Expect = 2e-05
 Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 20/140 (14%)

Query: 10  VTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           +TGG G +G  L   L + G    V  + RS P+     + L  L  A  R+ +   D+ 
Sbjct: 5   ITGGLGGLGRALARWLAERGARRLVLLS-RSGPDAPGAAALLAELEAAGARVTVVACDVA 63

Query: 68  DPESFDAAIAGC-------AGVIHVAAPID------IDGKETEEVMTQRA-VNGTIGILK 113
           D ++  A +A          GVIH A  +D      +  +    V+       G    L 
Sbjct: 64  DRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLASLTPERFAAVL--APKAAGAW-NLH 120

Query: 114 SCLKSGTVKRFVYTSSGSTV 133
                  +  FV  SS + V
Sbjct: 121 ELTADLPLDFFVLFSSIAGV 140

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 45.0 bits (107), Expect = 3e-05
 Identities = 34/86 (39%), Positives = 40/86 (46%), Gaps = 6/86 (6%)

Query: 4  QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
          Q  KV VTG TGF GSWL + LL+ G  V      DP    +L  L NL  A +    F 
Sbjct: 3  QGKKVLVTGHTGFKGSWLSLWLLELGAEV-YGYSLDPPTSPNLFELLNL--AKKIEDHF- 58

Query: 64 ADLNDPESFDAAIAGCAG--VIHVAA 87
           D+ D      AIA      V H+AA
Sbjct: 59 GDIRDAAKLRKAIAEFKPEIVFHLAA 84

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase

 Score = 44.7 bits (106), Expect = 3e-05
 Identities = 41/181 (22%), Positives = 67/181 (37%), Gaps = 44/181 (24%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           ++ +TG  G +G  L+ +L   G  V    RS                          DL
Sbjct: 1   RILITGANGQLGRELVQQLSPEGRVVVALTRSQ------------------------LDL 36

Query: 67  NDPESFDAAIAGCAG--VIHVAAPIDIDGKETEEVMTQRAVN--GTIGILKSCLKSGTVK 122
            DPE+ +  +       V++ AA  D+DG E++      AVN      + ++  + G   
Sbjct: 37  TDPEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKA-FAVNALAPQNLARAAARHGA-- 93

Query: 123 RFVYTSSGSTVY-FSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE 181
           R V+    ST Y F G+      E     +D    L+++G+S    K   E+A       
Sbjct: 94  RLVHI---STDYVFDGEGKRPYRE-----DDATNPLNVYGQS----KLAGEQAVRAAGPN 141

Query: 182 H 182
            
Sbjct: 142 A 142

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 33/140 (23%), Positives = 55/140 (39%), Gaps = 20/140 (14%)

Query: 10  VTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           VTGG G +G  L   L + G  + V  + RS     +  + L  L      + +   D++
Sbjct: 5   VTGGLGGLGLELARWLAERGARHLVLLS-RSGAPDPEAEALLAELEARGAEVTVVACDVS 63

Query: 68  DPESFDAAIAGC-------AGVIHVA-----API-DIDGKETEEVMTQRA-VNGTIGILK 113
           D ++  A +A          GVIH A     A + ++  ++   V+     V G    L 
Sbjct: 64  DRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMTAEDFARVL--APKVTGAW-NLH 120

Query: 114 SCLKSGTVKRFVYTSSGSTV 133
              +   +  FV  SS + V
Sbjct: 121 EATRDRPLDFFVLFSSIAGV 140

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 42.7 bits (101), Expect = 8e-05
 Identities = 50/266 (18%), Positives = 81/266 (30%), Gaps = 71/266 (26%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
             VTG +  IG  +   L   GY V+  +R +PE       L  L  +   ++    D  
Sbjct: 3   ALVTGASRGIGIEIARALARDGYRVSLGLR-NPED------LAALSASGGDVEAVPYDAR 55

Query: 68  DPES--------------FDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILK 113
           DPE                D  +   AG+       +    E E       V     + +
Sbjct: 56  DPEDARALVDALRDRFGRIDVLVH-NAGIGRPTTLREGSDAELEAHF-SINVIAPAELTR 113

Query: 114 SCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTK- 168
           + L    ++G+  R V+ +S      SGK V   +                   Y  +K 
Sbjct: 114 ALLPALREAGS-GRVVFLNSL-----SGKRVLAGN-----------------AGYSASKF 150

Query: 169 ---TLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL 225
               L      E   +HG+ +  + P FV  P               M  G     +   
Sbjct: 151 ALRALAHALRQEGW-DHGVRVSAVCPGFVDTP---------------MAQGLTLVGAFPP 194

Query: 226 NISMVHIDDVARAHIFLLEYPDAKGR 251
              M+   D+A     ++E P+    
Sbjct: 195 EE-MIQPKDIANLVRMVIELPENITS 219

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score = 43.5 bits (103), Expect = 9e-05
 Identities = 43/143 (30%), Positives = 55/143 (38%), Gaps = 28/143 (19%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFV----TTTVRSDPEHKKD-LSFLTNLPGASERLQI 61
           K+ VTG  GFIG  +  RLL+ G  V          D   K+  L  L    G       
Sbjct: 2   KILVTGAAGFIGFHVAKRLLERGDEVVGIDNLNDYYDVRLKEARLELLGKSGGFK----F 57

Query: 62  FNADLNDPE---------SFDAAIAGCAGVIHVAAPIDI-DGKETEEVMTQRAVNGTIGI 111
              DL D E          FDA       VIH+AA   +    E         + G + +
Sbjct: 58  VKGDLEDREALRRLFKDHEFDA-------VIHLAAQAGVRYSLENPHAYVDSNIVGFLNL 110

Query: 112 LKSCLKSGTVKRFVYTSSGSTVY 134
           L+ C +   VK  VY SS S+VY
Sbjct: 111 LELC-RHFGVKHLVYASS-SSVY 131

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 43.4 bits (103), Expect = 9e-05
 Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 6/131 (4%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSD--PEHKKDLSFLTNLPGASERLQIFNA 64
           +V +TGG GFIGS L    L  G+ V     +        +L++L         ++  + 
Sbjct: 2   RVLITGGAGFIGSNLARFFLKQGWEV-IGFDNLMRRGSFGNLAWLKANR-EDGGVRFVHG 59

Query: 65  DLNDPESFDAAIAGCAGVIHVAAPIDID-GKETEEVMTQRAVNGTIGILKSCLKSGTVKR 123
           D+ +    +        +IH AA   +     +  +  +    GT+ +L++  +      
Sbjct: 60  DIRNRNDLEDLFEDIDLIIHTAAQPSVTTSASSPRLDFETNALGTLNVLEAARQHAPNAP 119

Query: 124 FVYTSSGSTVY 134
           F++TS+ + VY
Sbjct: 120 FIFTST-NKVY 129

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 34/143 (23%), Positives = 52/143 (36%), Gaps = 22/143 (15%)

Query: 10  VTGGTGFIGSWLIMRLLDHGYFVTTTV---RS--DPEHKKDLSFLTNLPGASERLQIFNA 64
           VTGG G IG  L   L     +    V   RS   PE +     L  L     R+   +A
Sbjct: 210 VTGGAGGIGRALARALARR--YGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISA 267

Query: 65  DLNDPESFDAAIAG-------------CAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGI 111
           D+ D  +    +                AGV+  A       ++ E V+  + V+G + +
Sbjct: 268 DVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAEDFEAVLAPK-VDGLLNL 326

Query: 112 LKSCLKSGTVKRFVYTSSGSTVY 134
            +  L    +  FV  SS S  +
Sbjct: 327 AQ-ALADEPLDFFVLFSSVSAFF 348

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 42.2 bits (100), Expect = 3e-04
 Identities = 39/108 (36%), Positives = 47/108 (43%), Gaps = 16/108 (14%)

Query: 10  VTGGTGFIGSWLIMRLLDH--GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           VTGGTGFIG  L+ RLLD      V   VR   +    L  L    GA +R+     DL 
Sbjct: 5   VTGGTGFIGRRLVSRLLDRRREATVHVLVR--RQSLSRLEALAAYWGA-DRVVPLVGDLT 61

Query: 68  DPE-SFDAAIAGCAG----VIHVAAPIDIDGKETEEVMTQRAVN--GT 108
           +P      A     G    V+H+AA  D+   E      QRA N  GT
Sbjct: 62  EPGLGLSEADIAELGDIDHVVHLAAIYDLTADEE----AQRAANVDGT 105

Length = 657

>gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 8/88 (9%)

Query: 8  VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
          + VTG TG  G  +I  LL  G      V  + E    L+      G     ++   D N
Sbjct: 1  IAVTGATGQQGGSVIRHLLAKGASQVRAVVRNVEKAATLA----DQGV----EVRQGDYN 52

Query: 68 DPESFDAAIAGCAGVIHVAAPIDIDGKE 95
           PE    A AG + +  +  P   +  E
Sbjct: 53 QPELLQKAFAGASKLFIITGPHYDNTLE 80

Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 47/276 (17%), Positives = 89/276 (32%), Gaps = 68/276 (24%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           K+ + G TG +G  ++  LL    F T TV + P       F          +++   D 
Sbjct: 1   KIAIAGATGTLGGPIVSALLASPGF-TVTVLTRPSSTSSNEF------QPSGVKVVPVDY 53

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
              ES  AA+ G   VI       I          Q      + ++ + + +G VKRF+ 
Sbjct: 54  ASHESLVAALKGVDAVISALGGAAIG--------DQ------LKLIDAAIAAG-VKRFIP 98

Query: 127 T--SSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGL 184
           +          +   +D+ DE          K D+                  +      
Sbjct: 99  SEFGVDYDRIGALPLLDLFDE----------KRDVR----------------RYLRAKNA 132

Query: 185 DL-VTLIP-----SFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARA 238
            L  T +       +++ P         + +  A + G+ E        +   ++D+ RA
Sbjct: 133 GLPWTYVSTGMFLDYLLEPLF---GVVDLANRTATIYGDGET-----KFAFTTLEDIGRA 184

Query: 239 HIFLLEYPDAKGR---YICSSAKLTIQEMAEFLSAK 271
               L +PD       ++ +   +T  E+   +   
Sbjct: 185 VARALTHPDRTLNRVVFV-AGDVVTQNELIALVERV 219

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 40/172 (23%), Positives = 62/172 (36%), Gaps = 45/172 (26%)

Query: 10  VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERL-----QIFNA 64
           VTGG GFIGS L+  L +                 D+  + NL     +       +   
Sbjct: 3   VTGGAGFIGSNLVKALNER-------------GITDILVVDNL-RDGHKFLNLADLVIAD 48

Query: 65  DLNDPESFDAAIAGCAG----VIHVAAPID---IDGK---ETEEVMTQRAVNGTIGILKS 114
            ++  +  D    G  G    + H  A  D    DG+   E     ++R       +L  
Sbjct: 49  YIDKEDFLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKR-------LLDW 101

Query: 115 CLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVL 166
           C + G    F+Y SS +T Y  G+        F    +  R L+++G S  L
Sbjct: 102 CAEKG--IPFIYASSAAT-YGDGE------AGFREGRELERPLNVYGYSKFL 144

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314

>gnl|CDD|187652 cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta-reductase-like proteins (5beta-POR), atypical (a) SDRs

 Score = 40.3 bits (95), Expect = 7e-04
 Identities = 57/281 (20%), Positives = 82/281 (29%), Gaps = 80/281 (28%)

Query: 10  VTGGTGFIGSWLIMRLLDHGYF----VTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA- 64
           V G TG  G W ++  L         V    R                    RL      
Sbjct: 4   VVGATGISG-WALVEHLLSDPGTWWKVYGLSRRPLP-----------TEDDPRLVEHIGI 51

Query: 65  DLNDPES--FDAAIAGCAGVIHV--AAPIDIDGKETEEVMTQRAVNGTIGILKSCLK--- 117
           DL DP      A + G   V HV  AA I+   +  E  +    VNG   +L++ L    
Sbjct: 52  DLLDPADTVLRAKLPGLEDVTHVFYAAYIE---RPDEAEL--VEVNG--AMLRNFLDALE 104

Query: 118 --SGTVKRFV-YTSSGSTVY---FSGKDVDMLDETFW-SDEDYIRKLDIWGK--SYVLTK 168
             S  +K  V  T  G+  Y            +E                     Y    
Sbjct: 105 PASPNLKHVVLQT--GTKHYGVHLGPFKTPRPEEPAREDPPRL------LPPNFYYDQED 156

Query: 169 TLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA-GSVRSTLAMVL------------ 215
            L      E A+  G     L P  ++G      FA G+  + LA+ L            
Sbjct: 157 LLF-----EAAKGKGWTWSVLRPDAIIG------FAPGNAMN-LALTLAVYAAICRELGA 204

Query: 216 -----GNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGR 251
                G+   ++ L          +AR  I+   +P+A   
Sbjct: 205 PLRFPGSPAAWNAL--SDATDARLLARFTIWAATHPEAANE 243

5beta-POR catalyzes the reduction of progesterone to 5beta-pregnane-3,20-dione in Digitalis plants. This subgroup of atypical-extended SDRs, shares the structure of an extended SDR, but has a different glycine-rich nucleotide binding motif (GXXGXXG) and lacks the YXXXK active site motif of classical and extended SDRs. Tyr-179 and Lys 147 are present in the active site, but not in the usual SDR configuration. Given these differences, it has been proposed that this subfamily represents a new SDR class. Other atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308

>gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional

 Score = 40.2 bits (94), Expect = 9e-04
 Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 9/132 (6%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           +V VTGG+G+IGS   ++LL +G+ V          +  L  +  L G          D+
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTF--VEGDI 59

Query: 67  NDPESFDAAIAGCA--GVIHVAAPIDIDGKETEEVMT--QRAVNGTIGILKSCLKSGTVK 122
            +       +   A   VIH A  +   G+  ++ +      VNGT+  L S +++  VK
Sbjct: 60  RNEALLTEILHDHAIDTVIHFAG-LKAVGESVQKPLEYYDNNVNGTL-RLISAMRAANVK 117

Query: 123 RFVYTSSGSTVY 134
             +++SS +TVY
Sbjct: 118 NLIFSSS-ATVY 128

Length = 338

>gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 40.3 bits (95), Expect = 0.001
 Identities = 45/153 (29%), Positives = 61/153 (39%), Gaps = 24/153 (15%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHG--YFVTT----TVRSDPEHKKDLSFLTNLPGASERLQ 60
           K+ VTGG GFIGS  +  +L+      V      T   + E+  D+         S R +
Sbjct: 2   KILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED-------SPRYR 54

Query: 61  IFNADLNDPESFDAAIAGCA--GVIHVAAP--ID--IDGKETEEVMTQRAVNGTIGILKS 114
               D+ D E  D          V+H AA   +D  IDG        Q  V GT  +L++
Sbjct: 55  FVQGDICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGP---APFIQTNVVGTYTLLEA 111

Query: 115 CLKSGTVKRFVYTSSGSTVYFS-GKDVDMLDET 146
             K     RF + S+   VY   G D D   ET
Sbjct: 112 ARKYWGKFRFHHIST-DEVYGDLGLDDDAFTET 143

Length = 340

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 30/139 (21%), Positives = 47/139 (33%), Gaps = 22/139 (15%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           V VTG    IG  +   L + G  V      D   ++ L  + +L         +  D+ 
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAV---DRNFEQLLELVADLRRYGYPFATYKLDVA 57

Query: 68  DPESFDAAIA-------------GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKS 114
           D  + D  +                AG++ + A   ID    E+     AVN T G+   
Sbjct: 58  DSAAVDEVVQRLEREYGPIDVLVNVAGILRLGA---IDSLSDEDWQATFAVN-TFGVFN- 112

Query: 115 CLKSGTVKRFVYTSSGSTV 133
            +      R     SG+ V
Sbjct: 113 -VSQAVSPRMKRRRSGAIV 130

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 64/297 (21%), Positives = 107/297 (36%), Gaps = 89/297 (29%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           K+ VTG  G +GS ++  L   GY       S                          DL
Sbjct: 1   KILVTGHRGLVGSAIVRVLARRGYENVVFRTSK-----------------------ELDL 37

Query: 67  NDPESFDAAIA--GCAGVIHVAAPID-IDGKETEEVMTQRA----VNGTIG--ILKSCLK 117
            D E+  A         VIH+AA +  I        MT  A     N  I   ++ +  +
Sbjct: 38  TDQEAVRAFFEKEKPDYVIHLAAKVGGIVAN-----MTYPADFLRDNLLINDNVIHAAHR 92

Query: 118 SGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW-------GKSYVLTKTL 170
            G VK+ V    GS+  +       +DE+           D+         + Y + K  
Sbjct: 93  FG-VKKLV--FLGSSCIYPDLAPQPIDES-----------DLLTGPPEPTNEGYAIAKRA 138

Query: 171 TERAALEFAEEHGLDLVTLIPSFVVGPFICPKF---AGSV------RSTLAMVLGN---- 217
             +    + +++G D ++++P+ + GP     F      V      +   A + G     
Sbjct: 139 GLKLCEAYRKQYGCDYISVMPTNLYGPH--DNFDPENSHVIPALIRKFHEAKLRGGKEVT 196

Query: 218 -------REEYSILLNISMVHIDDVARAHIFLLEYPDAKGRY-ICSSAKLTIQEMAE 266
                  R E+        ++ DD+ARA +FLLE  D      + S  +++I+E+AE
Sbjct: 197 VWGSGTPRREF--------LYSDDLARAIVFLLENYDEPIIVNVGSGVEISIRELAE 245

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 10 VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP 69
          VTG    +G  + +RL   G  V    RSD E  ++L     +     R Q   AD+ D 
Sbjct: 11 VTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEA--VEALGRRAQAVQADVTDK 68

Query: 70 ESFDAAIA 77
           + +AA+A
Sbjct: 69 AALEAAVA 76

Length = 249

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 5/82 (6%)

Query: 10 VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP 69
          VTGG G IG+ +  RL   GY V       P  ++  ++L          ++   D++  
Sbjct: 5  VTGGMGGIGTAICQRLAKDGYRVAANCG--PNEERAEAWLQEQGALGFDFRVVEGDVSS- 61

Query: 70 ESFDAAIAGCAGVIHVAAPIDI 91
            F++  A  A V     PID+
Sbjct: 62 --FESCKAAVAKVEAELGPIDV 81

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 9/123 (7%)

Query: 10  VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP 69
           +TGGTG  G   I RLL++       + S  E K+    +     A   L+ F  D+ D 
Sbjct: 9   ITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWE--MQQKFPAP-CLRFFIGDVRDK 65

Query: 70  ESFDAAIAGCAGVIHVAAPIDIDGKE---TEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
           E    A+ G   V+H AA   +   E    E + T   +NG   ++ + + +G VKR V 
Sbjct: 66  ERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTN--INGAQNVIDAAIDNG-VKRVVA 122

Query: 127 TSS 129
            S+
Sbjct: 123 LST 125

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 37/149 (24%), Positives = 56/149 (37%), Gaps = 17/149 (11%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDH--GYFVTT----TVRSDPEHKKDLSFLTNLPGASERLQ 60
           ++ VTGG GFIGS  +  +L+      V      T   + E+  DL         + R +
Sbjct: 1   RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE-------DNPRYR 53

Query: 61  IFNADLNDPESFDAAIAGCA--GVIHVAAPIDIDGK-ETEEVMTQRAVNGTIGILKSCLK 117
               D+ D E             V+H AA   +D          +  V GT  +L++  K
Sbjct: 54  FVKGDIGDRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRK 113

Query: 118 SGTVKRFVYTSSGSTVYFSGKDVDMLDET 146
                RF + S+   VY   +  D   ET
Sbjct: 114 YWHEFRFHHIST-DEVYGDLEKGDAFTET 141

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 38.2 bits (90), Expect = 0.003
 Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 42/144 (29%)

Query: 8   VCVTGGTGFIGSWLI----------MRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASE 57
           V VTGG G IGS L           + L     F    +R +   + +            
Sbjct: 1   VLVTGGGGSIGSELCRQILKFNPKKIILFSRDEFKLYEIRQELRQEYN----------DP 50

Query: 58  RLQIFNADLNDPESFDAAIA--GCAGVIHVAA----------PIDIDGKETEEVMTQRAV 105
           +L+ F  D+ D E  + A+   G   V H AA          P+       E + T   V
Sbjct: 51  KLRFFIGDVRDRERLERAMEQHGVDTVFHAAALKHVPLVEYNPM-------EAIKTN--V 101

Query: 106 NGTIGILKSCLKSGTVKRFVYTSS 129
            GT  + ++ +++G V++FV  S+
Sbjct: 102 LGTENVAEAAIENG-VEKFVLIST 124

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	327
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
PLN02583	297	cinnamoyl-CoA reductase	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	100.0
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	100.0
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	100.0
PRK05865	854	hypothetical protein; Provisional	100.0
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	100.0
PLN02778	298	3,5-epimerase/4-reductase	100.0
PLN02996	491	fatty acyl-CoA reductase	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.98
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.97
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.97
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.97
PLN02260	668	probable rhamnose biosynthetic enzyme	99.97
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.96
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.96
PRK12320	699	hypothetical protein; Provisional	99.96
PLN02503	605	fatty acyl-CoA reductase 2	99.95
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.95
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.95
PRK06482	276	short chain dehydrogenase; Provisional	99.94
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.94
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.94
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.93
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.93
PRK09135	249	pteridine reductase; Provisional	99.93
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.92
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK06180	277	short chain dehydrogenase; Provisional	99.92
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.92
PRK08263	275	short chain dehydrogenase; Provisional	99.92
PRK07775	274	short chain dehydrogenase; Provisional	99.92
PRK05875	276	short chain dehydrogenase; Provisional	99.92
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.92
PRK06914	280	short chain dehydrogenase; Provisional	99.92
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.92
PRK07806	248	short chain dehydrogenase; Provisional	99.92
PRK07074	257	short chain dehydrogenase; Provisional	99.91
PRK07774	250	short chain dehydrogenase; Provisional	99.91
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.91
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.91
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.91
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK07067	257	sorbitol dehydrogenase; Provisional	99.91
PRK06138	252	short chain dehydrogenase; Provisional	99.91
PLN03209	576	translocon at the inner envelope of chloroplast su	99.9
PRK12746	254	short chain dehydrogenase; Provisional	99.9
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.9
PRK06182	273	short chain dehydrogenase; Validated	99.9
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.9
KOG2774	366	consensus NAD dependent epimerase [General functio	99.9
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK05876	275	short chain dehydrogenase; Provisional	99.9
PRK08219	227	short chain dehydrogenase; Provisional	99.89
PRK06194	287	hypothetical protein; Provisional	99.89
PRK07890	258	short chain dehydrogenase; Provisional	99.89
PRK12829	264	short chain dehydrogenase; Provisional	99.89
PRK12828	239	short chain dehydrogenase; Provisional	99.89
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.89
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK06179	270	short chain dehydrogenase; Provisional	99.89
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.89
PRK12827	249	short chain dehydrogenase; Provisional	99.89
PRK07060	245	short chain dehydrogenase; Provisional	99.89
PRK06128	300	oxidoreductase; Provisional	99.89
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
PRK06701	290	short chain dehydrogenase; Provisional	99.89
PRK06123	248	short chain dehydrogenase; Provisional	99.89
PRK05993	277	short chain dehydrogenase; Provisional	99.88
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK08628	258	short chain dehydrogenase; Provisional	99.88
PRK05717	255	oxidoreductase; Validated	99.88
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK09186	256	flagellin modification protein A; Provisional	99.88
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK12939	250	short chain dehydrogenase; Provisional	99.88
PRK09134	258	short chain dehydrogenase; Provisional	99.88
PRK12937	245	short chain dehydrogenase; Provisional	99.88
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.88
PRK06181	263	short chain dehydrogenase; Provisional	99.88
PLN02253	280	xanthoxin dehydrogenase	99.88
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.88
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.88
PRK08264	238	short chain dehydrogenase; Validated	99.88
PRK10538	248	malonic semialdehyde reductase; Provisional	99.87
PRK06500	249	short chain dehydrogenase; Provisional	99.87
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.87
PRK07024	257	short chain dehydrogenase; Provisional	99.87
PRK06841	255	short chain dehydrogenase; Provisional	99.87
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.87
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK07577	234	short chain dehydrogenase; Provisional	99.87
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.87
PRK07985	294	oxidoreductase; Provisional	99.87
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.87
PRK06523	260	short chain dehydrogenase; Provisional	99.87
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.87
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK07478	254	short chain dehydrogenase; Provisional	99.86
PRK12743	256	oxidoreductase; Provisional	99.86
PRK06196	315	oxidoreductase; Provisional	99.86
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.86
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK07825	273	short chain dehydrogenase; Provisional	99.86
PRK07035	252	short chain dehydrogenase; Provisional	99.86
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.86
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.86
PRK08643	256	acetoin reductase; Validated	99.86
PRK05650	270	short chain dehydrogenase; Provisional	99.86
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.86
PRK06398	258	aldose dehydrogenase; Validated	99.86
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.86
PRK09291	257	short chain dehydrogenase; Provisional	99.86
PRK07814	263	short chain dehydrogenase; Provisional	99.86
PRK06114	254	short chain dehydrogenase; Provisional	99.85
PRK07454	241	short chain dehydrogenase; Provisional	99.85
PRK06949	258	short chain dehydrogenase; Provisional	99.85
PRK08017	256	oxidoreductase; Provisional	99.85
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.85
PRK07063	260	short chain dehydrogenase; Provisional	99.85
PRK07069	251	short chain dehydrogenase; Validated	99.85
PRK07856	252	short chain dehydrogenase; Provisional	99.85
PRK07041	230	short chain dehydrogenase; Provisional	99.85
PRK12747	252	short chain dehydrogenase; Provisional	99.85
PRK06172	253	short chain dehydrogenase; Provisional	99.85
PRK08251	248	short chain dehydrogenase; Provisional	99.85
PRK12744	257	short chain dehydrogenase; Provisional	99.85
PRK08265	261	short chain dehydrogenase; Provisional	99.85
PRK12742	237	oxidoreductase; Provisional	99.85
PRK08589	272	short chain dehydrogenase; Validated	99.85
PRK05693	274	short chain dehydrogenase; Provisional	99.85
PRK07326	237	short chain dehydrogenase; Provisional	99.85
PRK07109	334	short chain dehydrogenase; Provisional	99.85
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.84
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.84
PRK08267	260	short chain dehydrogenase; Provisional	99.84
PRK08324	681	short chain dehydrogenase; Validated	99.84
PRK06101	240	short chain dehydrogenase; Provisional	99.84
PRK09242	257	tropinone reductase; Provisional	99.84
PRK07102	243	short chain dehydrogenase; Provisional	99.84
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.84
PRK07576	264	short chain dehydrogenase; Provisional	99.84
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.84
PRK06057	255	short chain dehydrogenase; Provisional	99.84
PRK05866	293	short chain dehydrogenase; Provisional	99.84
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.84
PRK05867	253	short chain dehydrogenase; Provisional	99.84
PRK06198	260	short chain dehydrogenase; Provisional	99.84
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.83
PRK06197	306	short chain dehydrogenase; Provisional	99.83
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.83
PRK08226	263	short chain dehydrogenase; Provisional	99.83
PRK07904	253	short chain dehydrogenase; Provisional	99.83
PRK09072	263	short chain dehydrogenase; Provisional	99.83
PRK06483	236	dihydromonapterin reductase; Provisional	99.83
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.83
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.83
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.83
PRK06924	251	short chain dehydrogenase; Provisional	99.83
PRK07677	252	short chain dehydrogenase; Provisional	99.82
PRK06139	330	short chain dehydrogenase; Provisional	99.82
PRK08339	263	short chain dehydrogenase; Provisional	99.82
PRK08278	273	short chain dehydrogenase; Provisional	99.82
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.82
PRK05872	296	short chain dehydrogenase; Provisional	99.82
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.82
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.82
PRK07023	243	short chain dehydrogenase; Provisional	99.82
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.82
PRK07062	265	short chain dehydrogenase; Provisional	99.82
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.81
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.81
PRK08703	239	short chain dehydrogenase; Provisional	99.81
PRK06484	520	short chain dehydrogenase; Validated	99.81
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.8
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.8
PRK07831	262	short chain dehydrogenase; Provisional	99.8
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.79
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
PRK07832	272	short chain dehydrogenase; Provisional	99.79
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.79
PRK05855	582	short chain dehydrogenase; Validated	99.79
PRK06940	275	short chain dehydrogenase; Provisional	99.79
PRK06953	222	short chain dehydrogenase; Provisional	99.79
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.78
PRK05854	313	short chain dehydrogenase; Provisional	99.78
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PRK07578	199	short chain dehydrogenase; Provisional	99.77
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.77
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PRK07791	286	short chain dehydrogenase; Provisional	99.77
PRK06125	259	short chain dehydrogenase; Provisional	99.77
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.77
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.77
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.76
PRK07201	657	short chain dehydrogenase; Provisional	99.76
PRK08177	225	short chain dehydrogenase; Provisional	99.76
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.76
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK06484	520	short chain dehydrogenase; Validated	99.75
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK12367	245	short chain dehydrogenase; Provisional	99.75
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.75
PLN02780	320	ketoreductase/ oxidoreductase	99.74
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.74
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.74
PRK05884	223	short chain dehydrogenase; Provisional	99.73
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.73
PRK05599	246	hypothetical protein; Provisional	99.73
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
COG2910	211	Putative NADH-flavin reductase [General function p	99.72
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.71
PRK08862	227	short chain dehydrogenase; Provisional	99.7
KOG0725	270	consensus Reductases with broad range of substrate	99.7
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.7
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.7
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.69
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.69
PLN00015	308	protochlorophyllide reductase	99.69
PRK08303	305	short chain dehydrogenase; Provisional	99.67
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.65
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.61
KOG1208	314	consensus Dehydrogenases with different specificit	99.6
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.57
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.57
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.56
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.56
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.55
COG1028	251	FabG Dehydrogenases with different specificities (	99.54
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.51
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.51
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.5
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.49
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.47
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.46
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.45
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.43
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.41
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.4
PTZ00325	321	malate dehydrogenase; Provisional	99.34
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.33
PRK06720	169	hypothetical protein; Provisional	99.25
PLN00106	323	malate dehydrogenase	99.23
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.2
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.14
PRK08309	177	short chain dehydrogenase; Provisional	99.11
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	99.1
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	99.0
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.95
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.88
PRK09620	229	hypothetical protein; Provisional	98.8
PRK05086	312	malate dehydrogenase; Provisional	98.78
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.73
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.71
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.71
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.7
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.67
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.61
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.56
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.5
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	98.43
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	98.4
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.4
PRK05442	326	malate dehydrogenase; Provisional	98.32
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	98.32
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.31
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.27
PRK14982	340	acyl-ACP reductase; Provisional	98.23
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.22
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	98.19
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	98.11
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	98.09
PLN00112	444	malate dehydrogenase (NADP); Provisional	98.09
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	98.06
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.0
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.99
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.99
PLN02602	350	lactate dehydrogenase	97.98
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.98
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.95
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.95
PRK06223	307	malate dehydrogenase; Reviewed	97.94
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.92
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.9
PTZ00117	319	malate dehydrogenase; Provisional	97.87
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.87
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.85
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.85
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.82
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.81
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.79
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.79
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.77
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.76
COG3268	382	Uncharacterized conserved protein [Function unknow	97.76
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.76
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.74
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.74
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.72
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.7
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.63
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.55
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.53
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.49
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.47
PRK09496	453	trkA potassium transporter peripheral membrane com	97.46
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.45
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.41
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	97.39
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.36
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.35
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.35
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.34
PRK04148	134	hypothetical protein; Provisional	97.34
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.34
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.3
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	97.29
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.28
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.26
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	97.18
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.18
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	97.17
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.15
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.15
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.14
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	97.13
PLN02383	344	aspartate semialdehyde dehydrogenase	97.13
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	97.12
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.11
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.09
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	97.07
PRK09496	453	trkA potassium transporter peripheral membrane com	97.04
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.0
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.99
KOG1496	332	consensus Malate dehydrogenase [Energy production	96.99
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.97
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.96
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	96.95
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.91
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	96.89
PRK08328	231	hypothetical protein; Provisional	96.89
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.87
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.84
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.82
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.82
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.81
PRK06849	389	hypothetical protein; Provisional	96.79
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.74
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.73
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.72
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.72
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.72
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.7
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.68
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	96.68
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.67
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.66
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.66
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.65
COG4982	866	3-oxoacyl-[acyl-carrier protein]	96.64
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	96.64
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.63
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.61
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.6
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.6
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.59
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.57
PRK08655	437	prephenate dehydrogenase; Provisional	96.54
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.53
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.53
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	96.51
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.51
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.5
PRK08223	287	hypothetical protein; Validated	96.49
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.49
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.49
PRK10669	558	putative cation:proton antiport protein; Provision	96.48
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.48
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.47
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.46
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.42
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.41
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.4
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.4
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.4
PRK03659	601	glutathione-regulated potassium-efflux system prot	96.4
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.36
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.36
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.34
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.3
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	96.3
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.3
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.28
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.26
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.23
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.22
PRK07877	722	hypothetical protein; Provisional	96.2
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.19
COG0677	436	WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas	96.19
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	96.19
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.16
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.14
TIGR01161	352	purK phosphoribosylaminoimidazole carboxylase, Pur	96.12
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.12
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.12
PRK06436	303	glycerate dehydrogenase; Provisional	96.12
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.12
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.11
PF08732	410	HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti	96.11
PRK13243	333	glyoxylate reductase; Reviewed	96.11
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	96.1
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.1
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	96.1
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.09
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.08
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	96.07
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.07
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.06
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.05
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.02
PLN02948	577	phosphoribosylaminoimidazole carboxylase	96.01
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.99
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.99
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.99
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.98
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.98
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.97
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.97
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	95.96
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	95.96
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	95.95
PRK08818	370	prephenate dehydrogenase; Provisional	95.95
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.93
PRK07574	385	formate dehydrogenase; Provisional	95.93
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.92
PRK12480	330	D-lactate dehydrogenase; Provisional	95.92
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.91
KOG1495	332	consensus Lactate dehydrogenase [Energy production	95.91
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.9
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.89
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	95.87
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.86
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.84
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	95.82
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	95.81
TIGR03693	637	ocin_ThiF_like putative thiazole-containing bacter	95.8
PRK03562	621	glutathione-regulated potassium-efflux system prot	95.8

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=8.1e-52  Score=336.47  Aligned_cols=295  Identities=23%  Similarity=0.272  Sum_probs=245.7

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi   83 (327)
                      |+||||||+||||||.+.+|++.|++|++++.-.......+...        .++++++|+.|.+.+.++|.  ++|.||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~--------~~~f~~gDi~D~~~L~~vf~~~~idaVi   72 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL--------QFKFYEGDLLDRALLTAVFEENKIDAVV   72 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc--------cCceEEeccccHHHHHHHHHhcCCCEEE
Confidence            57999999999999999999999999999998444444433211        16899999999999999997  699999


Q ss_pred             EccCCCC--CCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           84 HVAAPID--IDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        84 h~a~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      |+||...  .+.+.+. ++++.|+.++.+|+++|++.+ +++|||.||+++||  .+...|++|+++         ..|.
T Consensus        73 HFAa~~~VgESv~~Pl-~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG--~p~~~PI~E~~~---------~~p~  139 (329)
T COG1087          73 HFAASISVGESVQNPL-KYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYG--EPTTSPISETSP---------LAPI  139 (329)
T ss_pred             ECccccccchhhhCHH-HHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcC--CCCCcccCCCCC---------CCCC
Confidence            9999765  5566777 999999999999999999999 99999999999996  566689999997         4678


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC-------CCchHHHHHHHHhCCccccccccC--------
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK-------FAGSVRSTLAMVLGNREEYSILLN--------  226 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~--------  226 (327)
                      +|||.||++.|++++++++.++++++++|.+++.|....+.       ....++...+...++...+..+|.        
T Consensus       140 NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT  219 (329)
T COG1087         140 NPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGT  219 (329)
T ss_pred             CcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCC
Confidence            99999999999999999999999999999999999754321       244566666766666643333321        


Q ss_pred             --CCeeeHHHHHHHHHHhhcCCCCC---ceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHH-
Q 020334          227 --ISMVHIDDVARAHIFLLEYPDAK---GRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL-  299 (327)
Q Consensus       227 --~~~i~v~D~a~~~~~~~~~~~~~---~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-  299 (327)
                        ||||||.|+|++.+.+++.-..+   .+||+ +|...|+.|+++.+.+..| .++|......+..++..+..|++|+ 
T Consensus       220 ~iRDYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg-~~ip~~~~~RR~GDpa~l~Ad~~kA~  298 (329)
T COG1087         220 CIRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTG-RDIPVEIAPRRAGDPAILVADSSKAR  298 (329)
T ss_pred             eeeeeeehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhC-CcCceeeCCCCCCCCceeEeCHHHHH
Confidence              89999999999999998764333   47895 6889999999999999999 5555522444457788899999999 


Q ss_pred             Hhccccccc-cHHHHHHHHHHHHH
Q 020334          300 LDICFTYKY-GIDEMFDGAIKCCK  322 (327)
Q Consensus       300 ~~lg~~p~~-~~~~~l~~~~~~~~  322 (327)
                      +.|||+|++ ++++.+++..+|.+
T Consensus       299 ~~Lgw~p~~~~L~~ii~~aw~W~~  322 (329)
T COG1087         299 QILGWQPTYDDLEDIIKDAWDWHQ  322 (329)
T ss_pred             HHhCCCcccCCHHHHHHHHHHHhh
Confidence            999999999 99999999999987

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=1.4e-50  Score=338.56  Aligned_cols=321  Identities=43%  Similarity=0.728  Sum_probs=267.4

Q ss_pred             CCC-CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCC
Q 020334            1 MEE-QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGC   79 (327)
Q Consensus         1 m~~-~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~   79 (327)
                      |.. ++++|+|||||||||++++++|+++||+|+++.| +++..+...++.+++++.++...+.+|+.|++++.+++++|
T Consensus         1 m~~~~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR-~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gc   79 (327)
T KOG1502|consen    1 MDQDEGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVR-DPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGC   79 (327)
T ss_pred             CCCCCCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEc-CcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCC
Confidence            443 4689999999999999999999999999999999 77666666677777777778999999999999999999999


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeec---CCCCCcccCCCCCChhHhhh
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFS---GKDVDMLDETFWSDEDYIRK  156 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~---~~~~~~~~E~~~~~~~~~~~  156 (327)
                      |+|+|+|.+..+...++..+..+..+.|+.+++++|++..+++|+|++||.++....   ......++|+.|.+.++...
T Consensus        80 dgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~  159 (327)
T KOG1502|consen   80 DGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRC  159 (327)
T ss_pred             CEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHh
Confidence            999999999887666666689999999999999999998889999999999886533   33456789999998887654


Q ss_pred             cCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHH
Q 020334          157 LDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVA  236 (327)
Q Consensus       157 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  236 (327)
                      ..   +-|..+|..+|+.++.++++.+++.+.+-|+.|+||...+.........+..+.|....+... ...|+||+|+|
T Consensus       160 ~~---~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~-~~~~VdVrDVA  235 (327)
T KOG1502|consen  160 KK---LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNF-WLAFVDVRDVA  235 (327)
T ss_pred             hH---HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCC-ceeeEeHHHHH
Confidence            43   569999999999999999999999999999999999887755555555566666643322221 23499999999


Q ss_pred             HHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHHHhcc-ccccccHHHHHH
Q 020334          237 RAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDIC-FTYKYGIDEMFD  315 (327)
Q Consensus       237 ~~~~~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg-~~p~~~~~~~l~  315 (327)
                      .+.+.+++++...|+|+|.++..++.|+++.+.+.+|.+++|...............++++|++.|| |+.+ +++|++.
T Consensus       236 ~AHv~a~E~~~a~GRyic~~~~~~~~ei~~~l~~~~P~~~ip~~~~~~~~~~~~~~~~~~~k~k~lg~~~~~-~l~e~~~  314 (327)
T KOG1502|consen  236 LAHVLALEKPSAKGRYICVGEVVSIKEIADILRELFPDYPIPKKNAEEHEGFLTSFKVSSEKLKSLGGFKFR-PLEETLS  314 (327)
T ss_pred             HHHHHHHcCcccCceEEEecCcccHHHHHHHHHHhCCCCCCCCCCCccccccccccccccHHHHhcccceec-ChHHHHH
Confidence            9999999999999999999999889999999999999877665222211123334468999998887 7777 9999999


Q ss_pred             HHHHHHHHcCCC
Q 020334          316 GAIKCCKERGYL  327 (327)
Q Consensus       316 ~~~~~~~~~~~~  327 (327)
                      ++++++++.+++
T Consensus       315 dt~~sl~~~~~l  326 (327)
T KOG1502|consen  315 DTVESLREKGLL  326 (327)
T ss_pred             HHHHHHHHhcCC
Confidence            999999998875

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.2e-51  Score=331.28  Aligned_cols=305  Identities=19%  Similarity=0.148  Sum_probs=245.9

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAG   81 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~   81 (327)
                      |++|||||+||||++++++++++.  .+|+.++.  -.-+.....+..... .++..|+++|++|.+.+.++++  ++|+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~Dk--LTYAgn~~~l~~~~~-~~~~~fv~~DI~D~~~v~~~~~~~~~D~   77 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDK--LTYAGNLENLADVED-SPRYRFVQGDICDRELVDRLFKEYQPDA   77 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEec--ccccCCHHHHHhhhc-CCCceEEeccccCHHHHHHHHHhcCCCe
Confidence            579999999999999999999875  44666665  333344444333221 3689999999999999999998  5999


Q ss_pred             EEEccCCCC--CCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           82 VIHVAAPID--IDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        82 vih~a~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |+|+||-.+  .+-..+. .+.++|+.||.+|++++++....-||+|+||..|||.-...+..++|+++         -.
T Consensus        78 VvhfAAESHVDRSI~~P~-~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp---------~~  147 (340)
T COG1088          78 VVHFAAESHVDRSIDGPA-PFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTP---------YN  147 (340)
T ss_pred             EEEechhccccccccChh-hhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCC---------CC
Confidence            999998765  3444555 89999999999999999998733499999999999866665668999997         37


Q ss_pred             CchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHH-HHHhCCcccccccc-C-CCeeeHHHHH
Q 020334          160 WGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTL-AMVLGNREEYSILL-N-ISMVHIDDVA  236 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~-~~~i~v~D~a  236 (327)
                      |.+||+.||+.++.++++|.+.+|++++|.|+++-|||.+-+  -..++.++ ..+.|.++++-..| + |||+||+|-+
T Consensus       148 PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfp--EKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~  225 (340)
T COG1088         148 PSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFP--EKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHC  225 (340)
T ss_pred             CCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCc--hhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHH
Confidence            899999999999999999999999999999999999998654  35555544 55677776544444 4 9999999999


Q ss_pred             HHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCC---CCCcc-cccccccccChHHH-HhccccccccH
Q 020334          237 RAHIFLLEYPDAKGRYICS-SAKLTIQEMAEFLSAKHPEYPIPNV---DSLSE-IEGYKLSALSSKKL-LDICFTYKYGI  310 (327)
Q Consensus       237 ~~~~~~~~~~~~~~~y~~~-~~~~s~~e~~~~i~~~~~~~~~~~~---~~~~~-~~~~~~~~~d~~k~-~~lg~~p~~~~  310 (327)
                      +|+..++.++..|.+||++ +...+..|+++.|++.++.......   .-..+ ..-...+.+|.+|+ ++|||.|..++
T Consensus       226 ~ai~~Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~~f  305 (340)
T COG1088         226 RAIDLVLTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGWRPQETF  305 (340)
T ss_pred             HHHHHHHhcCcCCceEEeCCCccchHHHHHHHHHHHhCccccchhhheEeccCCCCCccceeechHHHhhhcCCCcCCCH
Confidence            9999999999999999975 5679999999999999984222100   01111 13356788999999 99999999999


Q ss_pred             HHHHHHHHHHHHHcC
Q 020334          311 DEMFDGAIKCCKERG  325 (327)
Q Consensus       311 ~~~l~~~~~~~~~~~  325 (327)
                      ++||+++++||.++.
T Consensus       306 e~GlrkTv~WY~~N~  320 (340)
T COG1088         306 ETGLRKTVDWYLDNE  320 (340)
T ss_pred             HHHHHHHHHHHHhch
Confidence            999999999999864

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=7.1e-50  Score=354.33  Aligned_cols=324  Identities=48%  Similarity=0.861  Sum_probs=241.3

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      |...+++||||||+||||++++++|+++|++|++++| ++.....+..+........+++++.+|++|.+.+.++++++|
T Consensus         1 ~~~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d   79 (351)
T PLN02650          1 MGSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVR-DPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCT   79 (351)
T ss_pred             CCCCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEc-CcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCC
Confidence            6667899999999999999999999999999999999 433332222221111111357899999999999999999999


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      +|||+|+.......++....+++|+.++.+++++|++.+.+++|||+||.++|+........++|+.+...+.......|
T Consensus        80 ~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  159 (351)
T PLN02650         80 GVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMT  159 (351)
T ss_pred             EEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccc
Confidence            99999987554333333378899999999999999987546899999999877532222223577765433322222234


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHH
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI  240 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  240 (327)
                      .++|+.||..+|.+++.++++++++++++||+++|||+........+........+....+...++++|+|++|+|++++
T Consensus       160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~  239 (351)
T PLN02650        160 GWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHI  239 (351)
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHH
Confidence            56899999999999999998889999999999999998654333222222222233332233334589999999999999


Q ss_pred             HhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCccc-ccccccccChHHHHhccccccccHHHHHHHHHH
Q 020334          241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEI-EGYKLSALSSKKLLDICFTYKYGIDEMFDGAIK  319 (327)
Q Consensus       241 ~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~  319 (327)
                      .+++++..++.|+++++.+|+.|+++.+.+.++...++..  .... ........|++|+++|||+|+++|+++|+++++
T Consensus       240 ~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~egl~~~i~  317 (351)
T PLN02650        240 FLFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNIPAR--FPGIDEDLKSVEFSSKKLTDLGFTFKYSLEDMFDGAIE  317 (351)
T ss_pred             HHhcCcCcCceEEecCCCcCHHHHHHHHHHhCcccCCCCC--CCCcCcccccccCChHHHHHhCCCCCCCHHHHHHHHHH
Confidence            9998876667888888889999999999998875444431  1111 233445678999888999999999999999999


Q ss_pred             HHHHcCCC
Q 020334          320 CCKERGYL  327 (327)
Q Consensus       320 ~~~~~~~~  327 (327)
                      |+++.+++
T Consensus       318 ~~~~~~~~  325 (351)
T PLN02650        318 TCREKGLI  325 (351)
T ss_pred             HHHHcCCC
Confidence            99988764

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=1e-48  Score=345.27  Aligned_cols=320  Identities=38%  Similarity=0.669  Sum_probs=237.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ++++||||||+||||++|+++|+++|++|+++.|+ +........+..... .++++++.+|++|.+.+.++++++|+||
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   85 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRD-PENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIAGCDLVF   85 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECC-CCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence            36889999999999999999999999999999994 322221111111111 1368899999999999999999999999


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCC--CCCcccCCCCCChhHhhhcCCCc
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGK--DVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~--~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      |+|+........+...++++|+.++.++++++++.+.+++|||+||.++|+....  ...+++|+.+..........+|.
T Consensus        86 h~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~  165 (338)
T PLN00198         86 HVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPT  165 (338)
T ss_pred             EeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCcc
Confidence            9999754433344435789999999999999988643789999999999973221  23456776543322222223567


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc-------ccCCCeeeHHH
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI-------LLNISMVHIDD  234 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~v~D  234 (327)
                      ++|+.||..+|.+++.++++++++++++||++||||+.....+..+..+.....+.......       .+.++|+|++|
T Consensus       166 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D  245 (338)
T PLN00198        166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVED  245 (338)
T ss_pred             chhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHH
Confidence            78999999999999999988899999999999999986544444333222233333322111       12379999999


Q ss_pred             HHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHHHhccccccccHHHHH
Q 020334          235 VARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKYGIDEMF  314 (327)
Q Consensus       235 ~a~~~~~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l  314 (327)
                      +|++++.+++.+..++.|++++..+|+.|+++.+.+.++...++.  ...+........+|++|++++||+|+++++|+|
T Consensus       246 ~a~a~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~k~~~~G~~p~~~l~~gi  323 (338)
T PLN00198        246 VCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVPT--DFGDFPSKAKLIISSEKLISEGFSFEYGIEEIY  323 (338)
T ss_pred             HHHHHHHHhhCcCcCCcEEEecCCCCHHHHHHHHHHHCCCCCCCc--cccccCCCCccccChHHHHhCCceecCcHHHHH
Confidence            999999999886656788888888999999999999887443333  121212233456899999668999999999999


Q ss_pred             HHHHHHHHHcCCC
Q 020334          315 DGAIKCCKERGYL  327 (327)
Q Consensus       315 ~~~~~~~~~~~~~  327 (327)
                      +++++|+++++++
T Consensus       324 ~~~~~~~~~~~~~  336 (338)
T PLN00198        324 DQTVEYFKAKGLL  336 (338)
T ss_pred             HHHHHHHHHcCCC
Confidence            9999999999875

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=3.6e-48  Score=341.27  Aligned_cols=311  Identities=35%  Similarity=0.566  Sum_probs=237.1

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc--hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK--DLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      .++|+||||||+||||++++++|+++|++|++++|+ .....  .+..+..   ...+++++.+|++|.+.+.++++++|
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~-~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~d   83 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRN-PDDPKNTHLRELEG---GKERLILCKADLQDYEALKAAIDGCD   83 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC-chhhhHHHHHHhhC---CCCcEEEEecCcCChHHHHHHHhcCC
Confidence            346789999999999999999999999999999993 32211  1111111   12368899999999999999999999


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccc-eeeeecCCC-CCcccCCCCCChhHhhhcC
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSG-STVYFSGKD-VDMLDETFWSDEDYIRKLD  158 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~-~v~~~~~~~-~~~~~E~~~~~~~~~~~~~  158 (327)
                      +|||+|+...   ..+. +.++.|+.++.+++++|++.+ +++|||+||. ++|+..... ..+++|++|...+.   ..
T Consensus        84 ~Vih~A~~~~---~~~~-~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~---~~  155 (342)
T PLN02214         84 GVFHTASPVT---DDPE-QMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDF---CK  155 (342)
T ss_pred             EEEEecCCCC---CCHH-HHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCCCCcccCcccCCChhh---cc
Confidence            9999999653   2344 889999999999999999987 8899999996 577532211 23588887643321   12


Q ss_pred             CCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHH
Q 020334          159 IWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARA  238 (327)
Q Consensus       159 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  238 (327)
                      .|.++|+.+|..+|.+++.++++++++++++||++||||+........+..+.....+....+. ...++|||++|+|++
T Consensus       156 ~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~i~V~Dva~a  234 (342)
T PLN02214        156 NTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYA-NLTQAYVDVRDVALA  234 (342)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCC-CCCcCeeEHHHHHHH
Confidence            3567899999999999999998889999999999999998654333333333333444433322 234899999999999


Q ss_pred             HHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHHHhccccccccHHHHHHHHH
Q 020334          239 HIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAI  318 (327)
Q Consensus       239 ~~~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~  318 (327)
                      ++.+++++..++.||+++..++++|+++.+.+.++...++...............+|++|+++|||+|+ +++|+|++++
T Consensus       235 ~~~al~~~~~~g~yn~~~~~~~~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~LG~~p~-~lee~i~~~~  313 (342)
T PLN02214        235 HVLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT-STKQSLYDTV  313 (342)
T ss_pred             HHHHHhCcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCCCCccccCCCCCccccCcHHHHHcCCccc-CHHHHHHHHH
Confidence            999999876678999877789999999999999885444432111111233455689999977999996 9999999999


Q ss_pred             HHHHHcCCC
Q 020334          319 KCCKERGYL  327 (327)
Q Consensus       319 ~~~~~~~~~  327 (327)
                      +|+++.|+|
T Consensus       314 ~~~~~~~~~  322 (342)
T PLN02214        314 KSLQEKGHL  322 (342)
T ss_pred             HHHHHcCCC
Confidence            999999875

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=3.1e-48  Score=342.87  Aligned_cols=307  Identities=17%  Similarity=0.125  Sum_probs=231.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCC-C-CCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNL-P-GASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      +|+|||||||||||++|+++|+++|++|++++|............... . ....+++++.+|+.|.+.+..+++++|+|
T Consensus        15 ~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~V   94 (348)
T PRK15181         15 PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYV   94 (348)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCCEE
Confidence            579999999999999999999999999999999433222212111110 0 00136889999999999999999999999


Q ss_pred             EEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           83 IHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        83 ih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      ||+|+....  ...++. ..+++|+.++.+++++|++.+ +++|||+||+++|+.  ....+..|+++         ..|
T Consensus        95 iHlAa~~~~~~~~~~~~-~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~--~~~~~~~e~~~---------~~p  161 (348)
T PRK15181         95 LHQAALGSVPRSLKDPI-ATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGD--HPDLPKIEERI---------GRP  161 (348)
T ss_pred             EECccccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCC--CCCCCCCCCCC---------CCC
Confidence            999996542  223444 789999999999999999987 899999999999963  23445566654         246


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC--CCchHHHHHHH-HhCCcccccc-ccC-CCeeeHHHH
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK--FAGSVRSTLAM-VLGNREEYSI-LLN-ISMVHIDDV  235 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~~~-~~~~~~~~~~-~~~-~~~i~v~D~  235 (327)
                      .++|+.+|..+|.+++.+.++++++++++||+++|||+..+.  ....+..++.. ..+++..+.. +.+ ++|+|++|+
T Consensus       162 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~  241 (348)
T PRK15181        162 LSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENV  241 (348)
T ss_pred             CChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHH
Confidence            678999999999999999888899999999999999986543  12345555443 4455544433 333 899999999


Q ss_pred             HHHHHHhhcCCC---CCceEEE-eccccCHHHHHHHHHHhCCCCCCC---CCCCCcc--cccccccccChHHH-Hhcccc
Q 020334          236 ARAHIFLLEYPD---AKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIP---NVDSLSE--IEGYKLSALSSKKL-LDICFT  305 (327)
Q Consensus       236 a~~~~~~~~~~~---~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~---~~~~~~~--~~~~~~~~~d~~k~-~~lg~~  305 (327)
                      |+++++++....   .+++||+ +++.+|++|+++.+.+.++....+   .......  ........+|++|+ +.|||+
T Consensus       242 a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~  321 (348)
T PRK15181        242 IQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYE  321 (348)
T ss_pred             HHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccccCHHHHHHHhCCC
Confidence            999998776432   4579997 567899999999999887622111   0001111  12334567899999 779999


Q ss_pred             ccccHHHHHHHHHHHHHHc
Q 020334          306 YKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       306 p~~~~~~~l~~~~~~~~~~  324 (327)
                      |+++++|+|+++++|++.+
T Consensus       322 P~~sl~egl~~~~~w~~~~  340 (348)
T PRK15181        322 PEFDIKEGLKQTLKWYIDK  340 (348)
T ss_pred             CCCCHHHHHHHHHHHHHHh
Confidence            9999999999999999764

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=4.7e-47  Score=332.63  Aligned_cols=319  Identities=34%  Similarity=0.570  Sum_probs=237.3

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      |+..+++|||||||||||++++++|+++|++|+++.| +.........+........+++++.+|++|++.+.++++++|
T Consensus         1 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   79 (322)
T PLN02986          1 MNGGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVR-DLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCD   79 (322)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC-CCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCC
Confidence            5545689999999999999999999999999999999 443322222222111112468999999999999999999999


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCC---CCCcccCCCCCChhHhhhc
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGK---DVDMLDETFWSDEDYIRKL  157 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~---~~~~~~E~~~~~~~~~~~~  157 (327)
                      +|||+|+.......++..+.++.|+.++.++++++++...+++|||+||.++|.++..   ...+++|+++......   
T Consensus        80 ~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~---  156 (322)
T PLN02986         80 AVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLC---  156 (322)
T ss_pred             EEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHh---
Confidence            9999999754433344336789999999999999998633889999999887542322   2346788876432211   


Q ss_pred             CCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHH
Q 020334          158 DIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVAR  237 (327)
Q Consensus       158 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  237 (327)
                      ..+.+.|+.+|..+|.+++.+.++++++++++||+++|||...+........+.....+... ++ ...++|+|++|+|+
T Consensus       157 ~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~-~~~~~~v~v~Dva~  234 (322)
T PLN02986        157 RETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL-FN-NRFYRFVDVRDVAL  234 (322)
T ss_pred             hccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC-CC-CcCcceeEHHHHHH
Confidence            12457899999999999999998889999999999999997654222122222222333332 22 22379999999999


Q ss_pred             HHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHHHhccccccccHHHHHHHH
Q 020334          238 AHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGA  317 (327)
Q Consensus       238 ~~~~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~  317 (327)
                      +++.+++++..++.||++++.+|++|+++.+++.+|...++......+ .......+|++|+++|||+|+ +++|+|+++
T Consensus       235 a~~~al~~~~~~~~yni~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~lg~~~~-~l~e~~~~~  312 (322)
T PLN02986        235 AHIKALETPSANGRYIIDGPIMSVNDIIDILRELFPDLCIADTNEESE-MNEMICKVCVEKVKNLGVEFT-PMKSSLRDT  312 (322)
T ss_pred             HHHHHhcCcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCCCCcccc-ccccCCccCHHHHHHcCCccc-CHHHHHHHH
Confidence            999999987767799998888999999999999998554443111111 111123489999988999998 999999999


Q ss_pred             HHHHHHcCCC
Q 020334          318 IKCCKERGYL  327 (327)
Q Consensus       318 ~~~~~~~~~~  327 (327)
                      ++|+++.|+|
T Consensus       313 ~~~~~~~~~~  322 (322)
T PLN02986        313 ILSLKEKCLL  322 (322)
T ss_pred             HHHHHHcCCC
Confidence            9999999875

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=2.2e-46  Score=328.83  Aligned_cols=318  Identities=34%  Similarity=0.562  Sum_probs=236.1

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      |...+|+||||||+||||++++++|+++|++|++++| ++........+........+++++.+|++|.+.+.++++++|
T Consensus         1 ~~~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   79 (325)
T PLN02989          1 MADGGKVVCVTGASGYIASWIVKLLLFRGYTINATVR-DPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCE   79 (325)
T ss_pred             CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEc-CCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCC
Confidence            6666789999999999999999999999999999988 433222222221111112468899999999999999999999


Q ss_pred             EEEEccCCCCCC-CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCC---CCCcccCCCCCChhHhhh
Q 020334           81 GVIHVAAPIDID-GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGK---DVDMLDETFWSDEDYIRK  156 (327)
Q Consensus        81 ~vih~a~~~~~~-~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~---~~~~~~E~~~~~~~~~~~  156 (327)
                      +|||+||..... ......+.++.|+.++.++++++.+....++||++||..+|+....   ...+++|+++......  
T Consensus        80 ~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~--  157 (325)
T PLN02989         80 TVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFA--  157 (325)
T ss_pred             EEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHh--
Confidence            999999965422 1222347889999999999999988533689999999988763221   2346788876432110  


Q ss_pred             cCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHH
Q 020334          157 LDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVA  236 (327)
Q Consensus       157 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  236 (327)
                       ..+.++|+.+|..+|.+++.+.++++++++++||+++|||+..+........+.....++.. +. ...++|+|++|+|
T Consensus       158 -~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~-~~-~~~r~~i~v~Dva  234 (325)
T PLN02989        158 -EERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP-FN-TTHHRFVDVRDVA  234 (325)
T ss_pred             -cccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC-CC-CcCcCeeEHHHHH
Confidence             12346799999999999999998889999999999999998654321112222233333332 22 2337999999999


Q ss_pred             HHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCccc--ccccccccChHHHHhccccccccHHHHH
Q 020334          237 RAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEI--EGYKLSALSSKKLLDICFTYKYGIDEMF  314 (327)
Q Consensus       237 ~~~~~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~k~~~lg~~p~~~~~~~l  314 (327)
                      ++++.+++++..+++||++++.+|++|+++.+.+.+|...++.  ...+.  ........|++|+++|||.|+++++++|
T Consensus       235 ~a~~~~l~~~~~~~~~ni~~~~~s~~ei~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~l~~gi  312 (325)
T PLN02989        235 LAHVKALETPSANGRYIIDGPVVTIKDIENVLREFFPDLCIAD--RNEDITELNSVTFNVCLDKVKSLGIIEFTPTETSL  312 (325)
T ss_pred             HHHHHHhcCcccCceEEEecCCCCHHHHHHHHHHHCCCCCCCC--CCCCcccccccCcCCCHHHHHHcCCCCCCCHHHHH
Confidence            9999999887666799998889999999999999988433322  11111  1223567899999779999999999999


Q ss_pred             HHHHHHHHHcCC
Q 020334          315 DGAIKCCKERGY  326 (327)
Q Consensus       315 ~~~~~~~~~~~~  326 (327)
                      +++++|+++.+.
T Consensus       313 ~~~~~~~~~~~~  324 (325)
T PLN02989        313 RDTVLSLKEKCL  324 (325)
T ss_pred             HHHHHHHHHhCC
Confidence            999999998764

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.2e-46  Score=330.26  Aligned_cols=314  Identities=34%  Similarity=0.564  Sum_probs=232.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      .++|||||||||||++++++|+++|++|++++|+ .........+.......++++++.+|++|++.+..+++++|+|||
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   82 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRD-PNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH   82 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcC-CCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence            5789999999999999999999999999999994 332222222211111124789999999999999999999999999


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhc-CCccEEEEecccee--eeecCC-CCCcccCCCCCChhHhhhcCCC
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKS-GTVKRFVYTSSGST--VYFSGK-DVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~v--~~~~~~-~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      +|+........+...++++|+.++.++++++++. + +++|||+||.++  |+..+. ...+++|+.+......   ...
T Consensus        83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~---~~~  158 (322)
T PLN02662         83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFC---EES  158 (322)
T ss_pred             eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHh---hcc
Confidence            9997654333333378899999999999999987 5 889999999864  432111 2345777764321110   112


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHH
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI  240 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  240 (327)
                      .+.|+.+|..+|++++.++++++++++++||+++|||+...........+.....+.. .+ ....++|+|++|+|++++
T Consensus       159 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~i~v~Dva~a~~  236 (322)
T PLN02662        159 KLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TF-PNASYRWVDVRDVANAHI  236 (322)
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc-cC-CCCCcCeEEHHHHHHHHH
Confidence            3579999999999999999888999999999999999764322222222222333322 12 123489999999999999


Q ss_pred             HhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHHHhccccccccHHHHHHHHHHH
Q 020334          241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAIKC  320 (327)
Q Consensus       241 ~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~  320 (327)
                      .+++++...+.||+++..+|++|+++.+.+.++....+.... ..........+|++|++.|||+++ +++++|+++++|
T Consensus       237 ~~~~~~~~~~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~d~~k~~~lg~~~~-~~~~~l~~~~~~  314 (322)
T PLN02662        237 QAFEIPSASGRYCLVERVVHYSEVVKILHELYPTLQLPEKCA-DDKPYVPTYQVSKEKAKSLGIEFI-PLEVSLKDTVES  314 (322)
T ss_pred             HHhcCcCcCCcEEEeCCCCCHHHHHHHHHHHCCCCCCCCCCC-CccccccccccChHHHHHhCCccc-cHHHHHHHHHHH
Confidence            999987666788887888999999999999887544443111 111233456799999977999985 999999999999


Q ss_pred             HHHcCCC
Q 020334          321 CKERGYL  327 (327)
Q Consensus       321 ~~~~~~~  327 (327)
                      |+++|++
T Consensus       315 ~~~~~~~  321 (322)
T PLN02662        315 LKEKGFL  321 (322)
T ss_pred             HHHcCCC
Confidence            9999875

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=6.9e-46  Score=328.95  Aligned_cols=318  Identities=43%  Similarity=0.718  Sum_probs=231.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ..|+||||||+||||++++++|+++|++|++++| ++.....+ ..+..    ..+++++.+|+.|.+.+.+++.++|+|
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLR-DPAKSLHLLSKWKE----GDRLRLFRADLQEEGSFDEAVKGCDGV   83 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHhhcc----CCeEEEEECCCCCHHHHHHHHcCCCEE
Confidence            4689999999999999999999999999999998 43322211 11111    246889999999999999999999999


Q ss_pred             EEccCCCCCCC----CchH----HHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCC---CCcccCCCCCCh
Q 020334           83 IHVAAPIDIDG----KETE----EVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKD---VDMLDETFWSDE  151 (327)
Q Consensus        83 ih~a~~~~~~~----~~~~----~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~---~~~~~E~~~~~~  151 (327)
                      ||+|+......    .++.    ...++.|+.++.+++++|++.+.+++||++||.++|+..+..   ..+++|+.+.+.
T Consensus        84 ih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~  163 (353)
T PLN02896         84 FHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPI  163 (353)
T ss_pred             EECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcH
Confidence            99998754221    1222    123455679999999999887447899999999999733222   145677643222


Q ss_pred             hHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc-------c
Q 020334          152 DYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI-------L  224 (327)
Q Consensus       152 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~  224 (327)
                      +...+..++.++|+.||.++|+++..++++++++++++||+++|||+.....+..+..+.....+....++.       .
T Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  243 (353)
T PLN02896        164 DHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRM  243 (353)
T ss_pred             HHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcccccccccccccc
Confidence            211111234568999999999999999988899999999999999987654555554444433343322211       1


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHHHhccc
Q 020334          225 LNISMVHIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICF  304 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~  304 (327)
                      +.++|+|++|+|++++.+++.+..++.|++++..+|++|+++.+++.++................ ...+|++|+++|||
T Consensus       244 ~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~lGw  322 (353)
T PLN02896        244 GSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPCSNIQVRLDEEKRGSI-PSEISSKKLRDLGF  322 (353)
T ss_pred             CceeEEeHHHHHHHHHHHHhCCCcCccEEecCCCCCHHHHHHHHHHhCCCCCccccccccccCcc-ccccCHHHHHHcCC
Confidence            13599999999999999998765567888888899999999999998873322210011111111 24568888877999


Q ss_pred             cccccHHHHHHHHHHHHHHcCCC
Q 020334          305 TYKYGIDEMFDGAIKCCKERGYL  327 (327)
Q Consensus       305 ~p~~~~~~~l~~~~~~~~~~~~~  327 (327)
                      +|+++++++|+++++|+++.+.+
T Consensus       323 ~p~~~l~~~i~~~~~~~~~~~~~  345 (353)
T PLN02896        323 EYKYGIEEIIDQTIDCCVDHGFL  345 (353)
T ss_pred             CccCCHHHHHHHHHHHHHHCCCC
Confidence            99999999999999999988753

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.8e-45  Score=295.38  Aligned_cols=303  Identities=19%  Similarity=0.179  Sum_probs=234.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC--CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH--GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d   80 (327)
                      .++++||||.||||++.+..+...  .++.+.++. -. -...+..+.... ..++.+++++|+.+...+..++.  ++|
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idk-L~-~~s~~~~l~~~~-n~p~ykfv~~di~~~~~~~~~~~~~~id   82 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDK-LD-YCSNLKNLEPVR-NSPNYKFVEGDIADADLVLYLFETEEID   82 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEee-cc-cccccchhhhhc-cCCCceEeeccccchHHHHhhhccCchh
Confidence            378999999999999999999986  456665555 21 111122222211 24789999999999988888775  689


Q ss_pred             EEEEccCCCC--CCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCccc-CCCCCChhHhhhc
Q 020334           81 GVIHVAAPID--IDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLD-ETFWSDEDYIRKL  157 (327)
Q Consensus        81 ~vih~a~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~-E~~~~~~~~~~~~  157 (327)
                      .|+|+|+..+  .+..++. ++...|+.++..|+++++..+++++|||+||..|||  ++...+.. |.+.         
T Consensus        83 ~vihfaa~t~vd~s~~~~~-~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYG--ds~~~~~~~E~s~---------  150 (331)
T KOG0747|consen   83 TVIHFAAQTHVDRSFGDSF-EFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYG--DSDEDAVVGEASL---------  150 (331)
T ss_pred             hhhhhHhhhhhhhhcCchH-HHhcCCchhhhhHHHHHHhccCeeEEEEecccceec--Ccccccccccccc---------
Confidence            9999999766  3344555 888999999999999999998899999999999996  44444444 6664         


Q ss_pred             CCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHH-HHhCCccccccccC--CCeeeHHH
Q 020334          158 DIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLA-MVLGNREEYSILLN--ISMVHIDD  234 (327)
Q Consensus       158 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~i~v~D  234 (327)
                      ..|.++|+.+|+++|..+++|.++++++++++|.++||||++.+  -..++.++. +..+.+.+....|.  |+|+|++|
T Consensus       151 ~nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~--~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD  228 (331)
T KOG0747|consen  151 LNPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYP--EKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVED  228 (331)
T ss_pred             CCCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcCh--HHHhHHHHHHHHhCCCcceecCcccceeeEeHHH
Confidence            57899999999999999999999999999999999999998765  345555554 33455544444443  89999999


Q ss_pred             HHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCC----CCCCCCCC-CCccc-ccccccccChHHHHhcccccc
Q 020334          235 VARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHP----EYPIPNVD-SLSEI-EGYKLSALSSKKLLDICFTYK  307 (327)
Q Consensus       235 ~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~----~~~~~~~~-~~~~~-~~~~~~~~d~~k~~~lg~~p~  307 (327)
                      +++++..+++++..+.+||+ ++...+..|+++.+++.+.    ..+.+.+. ...+. .....+.++++|++.|||+|+
T Consensus       229 ~~ea~~~v~~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik~LGw~~~  308 (331)
T KOG0747|consen  229 VSEAFKAVLEKGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIKKLGWRPT  308 (331)
T ss_pred             HHHHHHHHHhcCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHHhcCCccc
Confidence            99999999999877889996 6778999999988887544    22222111 11111 233458899999999999999


Q ss_pred             ccHHHHHHHHHHHHHHc
Q 020334          308 YGIDEMFDGAIKCCKER  324 (327)
Q Consensus       308 ~~~~~~l~~~~~~~~~~  324 (327)
                      ++|++||+++++||.++
T Consensus       309 ~p~~eGLrktie~y~~~  325 (331)
T KOG0747|consen  309 TPWEEGLRKTIEWYTKN  325 (331)
T ss_pred             CcHHHHHHHHHHHHHhh
Confidence            99999999999999764

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.6e-44  Score=325.01  Aligned_cols=299  Identities=19%  Similarity=0.221  Sum_probs=222.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      .|||||||||||||++|+++|+++|++|++++|...........+..    ..+++++.+|+.+..     +.++|+|||
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~----~~~~~~~~~Di~~~~-----~~~~D~ViH  190 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG----NPRFELIRHDVVEPI-----LLEVDQIYH  190 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc----CCceEEEECcccccc-----ccCCCEEEE
Confidence            47899999999999999999999999999999842222222211111    146788999997653     457999999


Q ss_pred             ccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           85 VAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        85 ~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      ||+....  ...++. ++++.|+.++.+|+++|++.+ . +|||+||.+||+  .....+.+|+.+....+    ..|.+
T Consensus       191 lAa~~~~~~~~~~p~-~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS~~VYg--~~~~~p~~E~~~~~~~p----~~p~s  261 (436)
T PLN02166        191 LACPASPVHYKYNPV-KTIKTNVMGTLNMLGLAKRVG-A-RFLLTSTSEVYG--DPLEHPQKETYWGNVNP----IGERS  261 (436)
T ss_pred             CceeccchhhccCHH-HHHHHHHHHHHHHHHHHHHhC-C-EEEEECcHHHhC--CCCCCCCCccccccCCC----CCCCC
Confidence            9986542  223444 889999999999999999987 4 899999999996  33345677775321111    23467


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHH-HhCCcccc-ccccC-CCeeeHHHHHHHH
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAM-VLGNREEY-SILLN-ISMVHIDDVARAH  239 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~-~~~i~v~D~a~~~  239 (327)
                      .|+.+|..+|++++.++++.+++++++||+++|||+........+..++.. ..+.+..+ +.+.+ ++|+|++|+++++
T Consensus       262 ~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai  341 (436)
T PLN02166        262 CYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGL  341 (436)
T ss_pred             chHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHH
Confidence            899999999999999998889999999999999998653323444444433 44555443 33333 8999999999999


Q ss_pred             HHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCC-CCCCCCCCCcccccccccccChHHH-HhccccccccHHHHHHH
Q 020334          240 IFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPE-YPIPNVDSLSEIEGYKLSALSSKKL-LDICFTYKYGIDEMFDG  316 (327)
Q Consensus       240 ~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p~~~~~~~l~~  316 (327)
                      +.+++.. ..++||+ +++.+|++|+++.+++.++. ..+..  ............+|++|+ +.|||+|+++++++|++
T Consensus       342 ~~~~~~~-~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~--~p~~~~~~~~~~~d~~Ka~~~LGw~P~~sl~egl~~  418 (436)
T PLN02166        342 VALMEGE-HVGPFNLGNPGEFTMLELAEVVKETIDSSATIEF--KPNTADDPHKRKPDISKAKELLNWEPKISLREGLPL  418 (436)
T ss_pred             HHHHhcC-CCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeee--CCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHH
Confidence            9999764 4679996 56789999999999998872 21211  111112334567899999 77999999999999999


Q ss_pred             HHHHHHHc
Q 020334          317 AIKCCKER  324 (327)
Q Consensus       317 ~~~~~~~~  324 (327)
                      +++|++++
T Consensus       419 ~i~~~~~~  426 (436)
T PLN02166        419 MVSDFRNR  426 (436)
T ss_pred             HHHHHHHH
Confidence            99999864

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=3.6e-44  Score=318.67  Aligned_cols=306  Identities=17%  Similarity=0.156  Sum_probs=225.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v   82 (327)
                      |++|||||||||||+++++.|+++|++++++.++.... .....+.... ...++.++.+|++|.+.+.++++  ++|+|
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V   78 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNLMSLAPVA-QSERFAFEKVDICDRAELARVFTEHQPDCV   78 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cchhhhhhcc-cCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence            46899999999999999999999998765444323221 1111111110 11367889999999999999887  48999


Q ss_pred             EEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhc--------CCccEEEEeccceeeeecCCCCCcccCCCCCChh
Q 020334           83 IHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKS--------GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDED  152 (327)
Q Consensus        83 ih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~--------~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~  152 (327)
                      |||||.....  ...+ ..++++|+.++.+++++|++.        ..+++|||+||.++|+.......+++|+++    
T Consensus        79 ih~A~~~~~~~~~~~~-~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~----  153 (355)
T PRK10217         79 MHLAAESHVDRSIDGP-AAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTP----  153 (355)
T ss_pred             EECCcccCcchhhhCh-HHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCC----
Confidence            9999875432  2233 488999999999999999863        126799999999999743333456888764    


Q ss_pred             HhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHH-HHhCCcccc-ccccC-CCe
Q 020334          153 YIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLA-MVLGNREEY-SILLN-ISM  229 (327)
Q Consensus       153 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~-~~~  229 (327)
                           ..|.++|+.||..+|.+++.++++++++++++||+++|||+..+  ...+..++. ...+.+..+ +.+.+ ++|
T Consensus       154 -----~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~~~~  226 (355)
T PRK10217        154 -----YAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP--EKLIPLMILNALAGKPLPVYGNGQQIRDW  226 (355)
T ss_pred             -----CCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCc--ccHHHHHHHHHhcCCCceEeCCCCeeeCc
Confidence                 24577899999999999999988889999999999999998643  234444433 334444333 33333 899


Q ss_pred             eeHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCC--CCC-------CCCC--cccccccccccChH
Q 020334          230 VHIDDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYP--IPN-------VDSL--SEIEGYKLSALSSK  297 (327)
Q Consensus       230 i~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~--~~~-------~~~~--~~~~~~~~~~~d~~  297 (327)
                      +|++|+|++++.+++....+++||+ +++.+|++|+++.+++.++...  .+.       ....  ..........+|++
T Consensus       227 i~v~D~a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  306 (355)
T PRK10217        227 LYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDAS  306 (355)
T ss_pred             CcHHHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHH
Confidence            9999999999999988666779997 5678999999999999776211  110       0000  01122345678999


Q ss_pred             HH-HhccccccccHHHHHHHHHHHHHHc
Q 020334          298 KL-LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       298 k~-~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      |+ ++|||+|+++++|+|+++++|++.+
T Consensus       307 k~~~~lg~~p~~~l~e~l~~~~~~~~~~  334 (355)
T PRK10217        307 KIARELGWLPQETFESGMRKTVQWYLAN  334 (355)
T ss_pred             HHHHhcCCCCcCcHHHHHHHHHHHHHhC
Confidence            99 8899999999999999999999865

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=6.2e-44  Score=320.08  Aligned_cols=312  Identities=16%  Similarity=0.156  Sum_probs=222.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .|+|||||||||||++|+++|+++ |++|++++| .+.....+..... .....+++++.+|+.|.+.+.++++++|+||
T Consensus        14 ~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r-~~~~~~~l~~~~~-~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~Vi   91 (386)
T PLN02427         14 PLTICMIGAGGFIGSHLCEKLMTETPHKVLALDV-YNDKIKHLLEPDT-VPWSGRIQFHRINIKHDSRLEGLIKMADLTI   91 (386)
T ss_pred             CcEEEEECCcchHHHHHHHHHHhcCCCEEEEEec-Cchhhhhhhcccc-ccCCCCeEEEEcCCCChHHHHHHhhcCCEEE
Confidence            468999999999999999999998 599999998 3322221111100 0012468999999999999999999999999


Q ss_pred             EccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhH--------
Q 020334           84 HVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDY--------  153 (327)
Q Consensus        84 h~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~--------  153 (327)
                      |||+....  ...++. +.+..|+.++.+++++|++.+  ++|||+||.++||.  ....+++|+.+.....        
T Consensus        92 HlAa~~~~~~~~~~~~-~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~--~~~~~~~e~~p~~~~~~~~~~~e~  166 (386)
T PLN02427         92 NLAAICTPADYNTRPL-DTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGK--TIGSFLPKDHPLRQDPAFYVLKED  166 (386)
T ss_pred             EcccccChhhhhhChH-HHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCC--CcCCCCCccccccccccccccccc
Confidence            99986542  122333 667789999999999998876  79999999999963  2223344443321100        


Q ss_pred             -----hhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCC---------CCCchHHHHHHH-HhCCc
Q 020334          154 -----IRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICP---------KFAGSVRSTLAM-VLGNR  218 (327)
Q Consensus       154 -----~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~---------~~~~~~~~~~~~-~~~~~  218 (327)
                           ..+...|.++|+.+|..+|+++..++++++++++++||++||||+...         ..+..+..+... ..+.+
T Consensus       167 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  246 (386)
T PLN02427        167 ESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREP  246 (386)
T ss_pred             ccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCC
Confidence                 001112456899999999999999988889999999999999997531         112233333333 34444


Q ss_pred             ccccccc-C-CCeeeHHHHHHHHHHhhcCCC--CCceEEEec--cccCHHHHHHHHHHhCCCCCC-CC-----C-CC---
Q 020334          219 EEYSILL-N-ISMVHIDDVARAHIFLLEYPD--AKGRYICSS--AKLTIQEMAEFLSAKHPEYPI-PN-----V-DS---  282 (327)
Q Consensus       219 ~~~~~~~-~-~~~i~v~D~a~~~~~~~~~~~--~~~~y~~~~--~~~s~~e~~~~i~~~~~~~~~-~~-----~-~~---  282 (327)
                      ..+...+ + ++|+|++|+|++++.+++++.  .+++||+++  +.+|++|+++.+.+.+|.... +.     . ..   
T Consensus       247 ~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~  326 (386)
T PLN02427        247 LKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKE  326 (386)
T ss_pred             eEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCccc
Confidence            4333322 2 799999999999999998763  356899764  489999999999998873211 10     0 00   


Q ss_pred             Ccc--cccccccccChHHH-HhccccccccHHHHHHHHHHHHHH
Q 020334          283 LSE--IEGYKLSALSSKKL-LDICFTYKYGIDEMFDGAIKCCKE  323 (327)
Q Consensus       283 ~~~--~~~~~~~~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~  323 (327)
                      ...  .........|++|+ ++|||+|+++++++|+++++|++.
T Consensus       327 ~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~  370 (386)
T PLN02427        327 FYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHK  370 (386)
T ss_pred             ccCccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHH
Confidence            000  12334567799999 779999999999999999999864

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=6.1e-44  Score=316.03  Aligned_cols=303  Identities=19%  Similarity=0.146  Sum_probs=226.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v   82 (327)
                      +|+||||||+||||+++++.|+++|++|++++|+..........+. .   ..+++++.+|++|.+++.++++  ++|+|
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~---~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v   79 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-L---AKKIEDHFGDIRDAAKLRKAIAEFKPEIV   79 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-h---cCCceEEEccCCCHHHHHHHHhhcCCCEE
Confidence            6899999999999999999999999999999994432221111111 1   1357889999999999999887  47999


Q ss_pred             EEccCCCC--CCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           83 IHVAAPID--IDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        83 ih~a~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      ||+|+...  ....++. ..+++|+.++.++++++++.+.+++||++||..+|+.. ....+++|+++         ..|
T Consensus        80 ih~A~~~~~~~~~~~~~-~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~-~~~~~~~e~~~---------~~p  148 (349)
T TIGR02622        80 FHLAAQPLVRKSYADPL-ETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRND-EWVWGYRETDP---------LGG  148 (349)
T ss_pred             EECCcccccccchhCHH-HHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCC-CCCCCCccCCC---------CCC
Confidence            99998543  2233444 78999999999999999876546799999999999632 22235677664         256


Q ss_pred             chhhHhhhHHHHHHHHHHHHHc-------CCcEEEEecCceecCCCCCCCCchHHHHHHHH-hCCccccccccC-CCeee
Q 020334          161 GKSYVLTKTLTERAALEFAEEH-------GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-LGNREEYSILLN-ISMVH  231 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~i~  231 (327)
                      .++|+.+|..+|.+++.+++++       +++++++||+++|||+.... ...+..+.... .+....+..+.+ ++|+|
T Consensus       149 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~  227 (349)
T TIGR02622       149 HDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAE-DRLIPDVIRAFSSNKIVIIRNPDATRPWQH  227 (349)
T ss_pred             CCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchh-hhhhHHHHHHHhcCCCeEECCCCcccceee
Confidence            7789999999999999987764       89999999999999975321 23444454444 444445544434 89999


Q ss_pred             HHHHHHHHHHhhcCC-----CCCceEEEec---cccCHHHHHHHHHHhCCCCCCCCCCCCc--ccccccccccChHHH-H
Q 020334          232 IDDVARAHIFLLEYP-----DAKGRYICSS---AKLTIQEMAEFLSAKHPEYPIPNVDSLS--EIEGYKLSALSSKKL-L  300 (327)
Q Consensus       232 v~D~a~~~~~~~~~~-----~~~~~y~~~~---~~~s~~e~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~k~-~  300 (327)
                      ++|+|++++.++++.     ..++.||+++   +++|+.|+++.+.+.++..++.......  .........+|++|+ +
T Consensus       228 v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  307 (349)
T TIGR02622       228 VLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLNHPHEARLLKLDSSKART  307 (349)
T ss_pred             HHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCCCCCcccceeecCHHHHHH
Confidence            999999999887642     2357999853   5899999999999877633222211111  112344567899999 7


Q ss_pred             hccccccccHHHHHHHHHHHHHH
Q 020334          301 DICFTYKYGIDEMFDGAIKCCKE  323 (327)
Q Consensus       301 ~lg~~p~~~~~~~l~~~~~~~~~  323 (327)
                      .|||+|+++++++|+++++|+++
T Consensus       308 ~lgw~p~~~l~~gi~~~i~w~~~  330 (349)
T TIGR02622       308 LLGWHPRWGLEEAVSRTVDWYKA  330 (349)
T ss_pred             HhCCCCCCCHHHHHHHHHHHHHH
Confidence            79999999999999999999985

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=1.1e-43  Score=314.17  Aligned_cols=305  Identities=19%  Similarity=0.235  Sum_probs=223.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCC-ChhHHHHHhcCCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN-DPESFDAAIAGCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~~~d~v   82 (327)
                      ||+|||||||||||++|+++|++. |++|++++| .....   ..+..    ..+++++.+|+. +.+.+.++++++|+|
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r-~~~~~---~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~d~V   72 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDM-QTDRL---GDLVN----HPRMHFFEGDITINKEWIEYHVKKCDVI   72 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeC-cHHHH---HHhcc----CCCeEEEeCCCCCCHHHHHHHHcCCCEE
Confidence            357999999999999999999986 799999998 33211   11111    146899999998 777888888899999


Q ss_pred             EEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           83 IHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        83 ih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      ||+|+....  ...++. ..+++|+.++.+++++|++.+  ++|||+||+.+|+..  ...+++|+++...  ..+...|
T Consensus        73 iH~aa~~~~~~~~~~p~-~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~--~~~~~~ee~~~~~--~~~~~~p  145 (347)
T PRK11908         73 LPLVAIATPATYVKQPL-RVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMC--PDEEFDPEASPLV--YGPINKP  145 (347)
T ss_pred             EECcccCChHHhhcCcH-HHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccC--CCcCcCccccccc--cCcCCCc
Confidence            999986432  233444 778999999999999999876  699999999999632  2345666643110  0111245


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC------CCchHHHHHHH-HhCCcccccc-ccC-CCeee
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK------FAGSVRSTLAM-VLGNREEYSI-LLN-ISMVH  231 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~------~~~~~~~~~~~-~~~~~~~~~~-~~~-~~~i~  231 (327)
                      .++|+.+|..+|+.++.++++++++++++||+++|||+..+.      ....+..++.. ..+.+..+.. +.+ ++|+|
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~  225 (347)
T PRK11908        146 RWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTD  225 (347)
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeecccc
Confidence            678999999999999999988899999999999999985431      12334444433 3454444433 223 89999


Q ss_pred             HHHHHHHHHHhhcCCC---CCceEEEec--cccCHHHHHHHHHHhCCCCC-C-------CCCCCCcc------ccccccc
Q 020334          232 IDDVARAHIFLLEYPD---AKGRYICSS--AKLTIQEMAEFLSAKHPEYP-I-------PNVDSLSE------IEGYKLS  292 (327)
Q Consensus       232 v~D~a~~~~~~~~~~~---~~~~y~~~~--~~~s~~e~~~~i~~~~~~~~-~-------~~~~~~~~------~~~~~~~  292 (327)
                      ++|++++++.+++++.   .+++||+++  ..+|++|+++.+++.++..+ .       +.......      ......+
T Consensus       226 v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (347)
T PRK11908        226 IDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNR  305 (347)
T ss_pred             HHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhccc
Confidence            9999999999998753   356999865  36999999999998776211 1       00000000      0122345


Q ss_pred             ccChHHH-HhccccccccHHHHHHHHHHHHHHc
Q 020334          293 ALSSKKL-LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       293 ~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      ..|++|+ +.|||+|+++++++++++++|+++.
T Consensus       306 ~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~  338 (347)
T PRK11908        306 VPKIDNTMQELGWAPKTTMDDALRRIFEAYRGH  338 (347)
T ss_pred             cCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence            5688999 8999999999999999999999864

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=7.4e-44  Score=321.22  Aligned_cols=300  Identities=18%  Similarity=0.188  Sum_probs=221.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..|||||||||||||++|+++|+++|++|++++|..............    ..+++++.+|+.++.     +.++|+||
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~----~~~~~~i~~D~~~~~-----l~~~D~Vi  188 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFS----NPNFELIRHDVVEPI-----LLEVDQIY  188 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhcc----CCceEEEECCccChh-----hcCCCEEE
Confidence            357899999999999999999999999999998732211111111111    246788999997753     45799999


Q ss_pred             EccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           84 HVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        84 h~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      |+|+....  ...++. +.++.|+.++.+|+++|++.+ + +|||+||..+|+  .....+.+|+.+....+    ..+.
T Consensus       189 HlAa~~~~~~~~~~p~-~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg--~~~~~p~~E~~~~~~~P----~~~~  259 (442)
T PLN02206        189 HLACPASPVHYKFNPV-KTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYG--DPLQHPQVETYWGNVNP----IGVR  259 (442)
T ss_pred             EeeeecchhhhhcCHH-HHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhC--CCCCCCCCccccccCCC----CCcc
Confidence            99986542  222444 889999999999999999987 4 899999999996  33344667765321111    1335


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHH-HhCCccccc-cccC-CCeeeHHHHHHH
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAM-VLGNREEYS-ILLN-ISMVHIDDVARA  238 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~-~~~i~v~D~a~~  238 (327)
                      ++|+.+|..+|+++..++++++++++++||+++|||+........+..++.. ..+++..+. .+.+ ++|+|++|+|++
T Consensus       260 s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~a  339 (442)
T PLN02206        260 SCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG  339 (442)
T ss_pred             chHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHH
Confidence            7899999999999999988889999999999999998543223344444433 344554433 3333 799999999999


Q ss_pred             HHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCC-CCCCCCCCCcccccccccccChHHH-HhccccccccHHHHHH
Q 020334          239 HIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPE-YPIPNVDSLSEIEGYKLSALSSKKL-LDICFTYKYGIDEMFD  315 (327)
Q Consensus       239 ~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p~~~~~~~l~  315 (327)
                      ++.++++. ..+.||+ +++.+|++|+++.+++.++. ..+..  ............+|++|+ ++|||+|+++|+|+|+
T Consensus       340 i~~a~e~~-~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~--~p~~~~~~~~~~~d~sKa~~~LGw~P~~~l~egl~  416 (442)
T PLN02206        340 LMRLMEGE-HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEF--RPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLP  416 (442)
T ss_pred             HHHHHhcC-CCceEEEcCCCceeHHHHHHHHHHHhCCCCceee--CCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHH
Confidence            99998765 4679996 56789999999999998862 22211  111112234567899999 8899999999999999


Q ss_pred             HHHHHHHHc
Q 020334          316 GAIKCCKER  324 (327)
Q Consensus       316 ~~~~~~~~~  324 (327)
                      ++++|+++.
T Consensus       417 ~~~~~~~~~  425 (442)
T PLN02206        417 LMVKDFRQR  425 (442)
T ss_pred             HHHHHHHHh
Confidence            999999764

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=8e-44  Score=321.94  Aligned_cols=316  Identities=14%  Similarity=0.119  Sum_probs=221.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc----------------hhhhhhCCCCCCCCeEEEeCCCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK----------------DLSFLTNLPGASERLQIFNADLN   67 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~D~~   67 (327)
                      ++|+||||||+||||++|+++|+++|++|++++|.......                .+..+...  ...+++++.+|++
T Consensus        46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~~v~~Dl~  123 (442)
T PLN02572         46 KKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV--SGKEIELYVGDIC  123 (442)
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh--hCCcceEEECCCC
Confidence            46889999999999999999999999999998752111100                00000000  0136889999999


Q ss_pred             ChhHHHHHhc--CCCEEEEccCCCCC--CCCch--HHHHHHHHHhHHHHHHHHHHhcCCcc-EEEEeccceeeeecCCCC
Q 020334           68 DPESFDAAIA--GCAGVIHVAAPIDI--DGKET--EEVMTQRAVNGTIGILKSCLKSGTVK-RFVYTSSGSTVYFSGKDV  140 (327)
Q Consensus        68 d~~~~~~~~~--~~d~vih~a~~~~~--~~~~~--~~~~~~~nv~~~~~l~~~~~~~~~~~-~~v~~SS~~v~~~~~~~~  140 (327)
                      |++.+.++++  ++|+|||+|+....  ...++  ....+++|+.++.+++++|++.+ ++ +|||+||..+||..  . 
T Consensus       124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~--~-  199 (442)
T PLN02572        124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTP--N-  199 (442)
T ss_pred             CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCC--C-
Confidence            9999999887  58999999976432  11111  12557899999999999999987 64 89999999999732  1 


Q ss_pred             CcccCCCCCC-----hhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC------------
Q 020334          141 DMLDETFWSD-----EDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKF------------  203 (327)
Q Consensus       141 ~~~~E~~~~~-----~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~------------  203 (327)
                      .+++|.....     ++.......|.++|+.+|..+|.+++.+++++|++++++||+++|||+.....            
T Consensus       200 ~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~  279 (442)
T PLN02572        200 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYD  279 (442)
T ss_pred             CCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcc
Confidence            2333321100     00000013557789999999999999999988999999999999999864310            


Q ss_pred             ---CchHHHHHHH-HhCCcccc-ccccC-CCeeeHHHHHHHHHHhhcCCCC-C--ceEEEeccccCHHHHHHHHHHh---
Q 020334          204 ---AGSVRSTLAM-VLGNREEY-SILLN-ISMVHIDDVARAHIFLLEYPDA-K--GRYICSSAKLTIQEMAEFLSAK---  271 (327)
Q Consensus       204 ---~~~~~~~~~~-~~~~~~~~-~~~~~-~~~i~v~D~a~~~~~~~~~~~~-~--~~y~~~~~~~s~~e~~~~i~~~---  271 (327)
                         ...+..++.. ..++++.+ +.+.+ |+|+||+|+|++++.++++... +  .+||++++.+|++|+++.+++.   
T Consensus       280 ~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~~~si~el~~~i~~~~~~  359 (442)
T PLN02572        280 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTEQFSVNELAKLVTKAGEK  359 (442)
T ss_pred             cchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCCceeHHHHHHHHHHHHHh
Confidence               1223333333 34554433 34444 8999999999999999986532 3  3788877889999999999998   


Q ss_pred             CCC-CCCCCCCCCcccccccccccChHHHHhccccccc---cHHHHHHHHHHHHHHcC
Q 020334          272 HPE-YPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKY---GIDEMFDGAIKCCKERG  325 (327)
Q Consensus       272 ~~~-~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~---~~~~~l~~~~~~~~~~~  325 (327)
                      ++. ..+.................|++|+++|||+|++   ++.+++.++++||+++-
T Consensus       360 ~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~LGw~p~~~~~~l~~~l~~~~~~~~~~~  417 (442)
T PLN02572        360 LGLDVEVISVPNPRVEAEEHYYNAKHTKLCELGLEPHLLSDSLLDSLLNFAVKYKDRV  417 (442)
T ss_pred             hCCCCCeeeCCCCcccccccccCccHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHhhc
Confidence            662 2211100111112234566799999779999998   99999999999998653

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=1.9e-43  Score=313.87  Aligned_cols=299  Identities=19%  Similarity=0.167  Sum_probs=221.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+|+|||||||||||++++++|.++|++|++++|.........         ...++++.+|++|.+.+..++.++|+||
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~D~Vi   90 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSED---------MFCHEFHLVDLRVMENCLKVTKGVDHVF   90 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccc---------cccceEEECCCCCHHHHHHHHhCCCEEE
Confidence            4689999999999999999999999999999999432111100         1135788999999998888888999999


Q ss_pred             EccCCCC---CCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCC--CCcccCCCCCChhHhhhcC
Q 020334           84 HVAAPID---IDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKD--VDMLDETFWSDEDYIRKLD  158 (327)
Q Consensus        84 h~a~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~--~~~~~E~~~~~~~~~~~~~  158 (327)
                      |+|+...   ....++. ..++.|+.++.+|+++|++.+ +++|||+||.++|+.....  ..+++|++..       ..
T Consensus        91 h~Aa~~~~~~~~~~~~~-~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~-------p~  161 (370)
T PLN02695         91 NLAADMGGMGFIQSNHS-VIMYNNTMISFNMLEAARING-VKRFFYASSACIYPEFKQLETNVSLKESDAW-------PA  161 (370)
T ss_pred             EcccccCCccccccCch-hhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCCccccCcCCCcCcccCC-------CC
Confidence            9998653   1122333 567899999999999999887 8999999999999733211  1235555410       12


Q ss_pred             CCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--chHHHHHHHH-h-CCcccc-ccccC-CCeeeH
Q 020334          159 IWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA--GSVRSTLAMV-L-GNREEY-SILLN-ISMVHI  232 (327)
Q Consensus       159 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~-~-~~~~~~-~~~~~-~~~i~v  232 (327)
                      .|.++|+.+|..+|++++.++++++++++++||+++|||+......  .....++... . +.+..+ +.+.+ ++|+|+
T Consensus       162 ~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v  241 (370)
T PLN02695        162 EPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFI  241 (370)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeH
Confidence            5578999999999999999988889999999999999997543211  1232333332 2 233333 33333 899999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCC-CCCCCCCCCcccccccccccChHHH-Hhcccccccc
Q 020334          233 DDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPE-YPIPNVDSLSEIEGYKLSALSSKKL-LDICFTYKYG  309 (327)
Q Consensus       233 ~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p~~~  309 (327)
                      +|++++++.+++++ .+++||+ +++.+|++|+++.+.+..|. .++..   ............|++|+ +.|||+|+++
T Consensus       242 ~D~a~ai~~~~~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~---~~~~~~~~~~~~d~sk~~~~lgw~p~~~  317 (370)
T PLN02695        242 DECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKH---IPGPEGVRGRNSDNTLIKEKLGWAPTMR  317 (370)
T ss_pred             HHHHHHHHHHHhcc-CCCceEecCCCceeHHHHHHHHHHHhCCCCCcee---cCCCCCccccccCHHHHHHhcCCCCCCC
Confidence            99999999988774 4678997 56789999999999988773 22111   11111123345899999 7899999999


Q ss_pred             HHHHHHHHHHHHHHc
Q 020334          310 IDEMFDGAIKCCKER  324 (327)
Q Consensus       310 ~~~~l~~~~~~~~~~  324 (327)
                      ++++|+++++|+++.
T Consensus       318 l~e~i~~~~~~~~~~  332 (370)
T PLN02695        318 LKDGLRITYFWIKEQ  332 (370)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999999763

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=1.5e-43  Score=312.84  Aligned_cols=304  Identities=17%  Similarity=0.134  Sum_probs=224.9

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC-CcchhhhhhCC--CCCCCCeEEEeCCCCChhHHHHHhc--CCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE-HKKDLSFLTNL--PGASERLQIFNADLNDPESFDAAIA--GCA   80 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~--~~d   80 (327)
                      |+||||||+||||++|+++|+++|++|++++|+... ....+..+...  .....+++++.+|++|.+.+.++++  ++|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            589999999999999999999999999999994321 11122221100  0001368899999999999999988  469


Q ss_pred             EEEEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCc---cEEEEeccceeeeecCCCCCcccCCCCCChhHhh
Q 020334           81 GVIHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTV---KRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIR  155 (327)
Q Consensus        81 ~vih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~---~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~  155 (327)
                      +|||+|+.....  ...+. ..+++|+.++.+++++|++.+ +   ++|||+||..+||.  ....+++|+++       
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~-~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~~vyg~--~~~~~~~E~~~-------  149 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPE-YTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTSELYGK--VQEIPQNETTP-------  149 (343)
T ss_pred             EEEECCcccccchhhhChH-HHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccHHhhCC--CCCCCCCCCCC-------
Confidence            999999975532  22333 677889999999999999876 4   38999999999963  33446778765       


Q ss_pred             hcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC-CCchHHHHHHHH-hCCcc--ccccccC-CCee
Q 020334          156 KLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK-FAGSVRSTLAMV-LGNRE--EYSILLN-ISMV  230 (327)
Q Consensus       156 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~-~~~~~~~~~~~~-~~~~~--~~~~~~~-~~~i  230 (327)
                        ..|.++|+.||..+|.+++.+++++++++++.|+.++|||+.... ....+..++..+ .+...  .++.+.+ ++|+
T Consensus       150 --~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i  227 (343)
T TIGR01472       150 --FYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWG  227 (343)
T ss_pred             --CCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCce
Confidence              356789999999999999999988899999999999999975432 223333333333 34332  2233333 8999


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCC-CCC-------------------CCCCCCcccccc
Q 020334          231 HIDDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPE-YPI-------------------PNVDSLSEIEGY  289 (327)
Q Consensus       231 ~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~-~~~-------------------~~~~~~~~~~~~  289 (327)
                      |++|+|++++.+++++. ++.||+ +++++|++|+++.+++.++. ...                   +...........
T Consensus       228 ~V~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (343)
T TIGR01472       228 HAKDYVEAMWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEV  306 (343)
T ss_pred             eHHHHHHHHHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCcc
Confidence            99999999999998754 468996 57889999999999998872 110                   000000011223


Q ss_pred             cccccChHHH-HhccccccccHHHHHHHHHHHHHH
Q 020334          290 KLSALSSKKL-LDICFTYKYGIDEMFDGAIKCCKE  323 (327)
Q Consensus       290 ~~~~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~  323 (327)
                      .....|++|+ ++|||+|+++++|+|++++++|++
T Consensus       307 ~~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~  341 (343)
T TIGR01472       307 DLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE  341 (343)
T ss_pred             chhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence            4456799999 889999999999999999999985

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=8e-43  Score=309.77  Aligned_cols=312  Identities=23%  Similarity=0.262  Sum_probs=228.4

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCC-CCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLP-GASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |++++++|||||||||||++++++|+++|++|++++|...........+.... ....+++++.+|+.|++.+.++++  
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~   80 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST   80 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence            77778999999999999999999999999999999884322211111111110 012468899999999999988886  


Q ss_pred             CCCEEEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhh
Q 020334           78 GCAGVIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIR  155 (327)
Q Consensus        78 ~~d~vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~  155 (327)
                      ++|+|||||+....  ....+. ..++.|+.++.+++++|++.+ +++||++||+.+|+  .....+++|+++       
T Consensus        81 ~~d~vih~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg--~~~~~~~~E~~~-------  149 (352)
T PLN02240         81 RFDAVIHFAGLKAVGESVAKPL-LYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYG--QPEEVPCTEEFP-------  149 (352)
T ss_pred             CCCEEEEccccCCccccccCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhC--CCCCCCCCCCCC-------
Confidence            68999999986542  223444 789999999999999999887 88999999999885  344567888875       


Q ss_pred             hcCCCchhhHhhhHHHHHHHHHHHHH-cCCcEEEEecCceecCCCCC-------CCCc-hHHHHHHHHhCCccccc----
Q 020334          156 KLDIWGKSYVLTKTLTERAALEFAEE-HGLDLVTLIPSFVVGPFICP-------KFAG-SVRSTLAMVLGNREEYS----  222 (327)
Q Consensus       156 ~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~i~R~~~v~G~~~~~-------~~~~-~~~~~~~~~~~~~~~~~----  222 (327)
                        ..|.++|+.+|..+|.+++.++.. .+++++++|++++||++...       ..+. .+..+.....++...+.    
T Consensus       150 --~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  227 (352)
T PLN02240        150 --LSATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGN  227 (352)
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCC
Confidence              245678999999999999988754 47999999999999985321       1122 22222222333321111    


Q ss_pred             -----cccC-CCeeeHHHHHHHHHHhhcCC----CC-CceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCccccccc
Q 020334          223 -----ILLN-ISMVHIDDVARAHIFLLEYP----DA-KGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYK  290 (327)
Q Consensus       223 -----~~~~-~~~i~v~D~a~~~~~~~~~~----~~-~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~  290 (327)
                           .+.+ ++|+|++|+|++++.+++..    .. +++||+ +++++|++|+++.+++.++. +.+............
T Consensus       228 ~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~  306 (352)
T PLN02240        228 DYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGK-KIPLKLAPRRPGDAE  306 (352)
T ss_pred             CCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCC-CCCceeCCCCCCChh
Confidence                 2222 79999999999999888642    22 368996 67889999999999998872 222210111112334


Q ss_pred             ccccChHHH-HhccccccccHHHHHHHHHHHHHHcCC
Q 020334          291 LSALSSKKL-LDICFTYKYGIDEMFDGAIKCCKERGY  326 (327)
Q Consensus       291 ~~~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~~~  326 (327)
                      .+..|++|+ ++|||+|+++++++|+++++|++++++
T Consensus       307 ~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~~  343 (352)
T PLN02240        307 EVYASTEKAEKELGWKAKYGIDEMCRDQWNWASKNPY  343 (352)
T ss_pred             hhhcCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcc
Confidence            556799999 889999999999999999999998764

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=6.1e-43  Score=331.88  Aligned_cols=307  Identities=18%  Similarity=0.214  Sum_probs=226.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhH-HHHHhcCCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPES-FDAAIAGCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~~~d~v   82 (327)
                      +|+|||||||||||++|+++|+++ |++|++++| .+.....   ...    ..+++++.+|++|... +.++++++|+|
T Consensus       315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r-~~~~~~~---~~~----~~~~~~~~gDl~d~~~~l~~~l~~~D~V  386 (660)
T PRK08125        315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDI-GSDAISR---FLG----HPRFHFVEGDISIHSEWIEYHIKKCDVV  386 (660)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeC-Cchhhhh---hcC----CCceEEEeccccCcHHHHHHHhcCCCEE
Confidence            578999999999999999999985 799999999 3322111   111    1468999999998665 56778899999


Q ss_pred             EEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           83 IHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        83 ih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      ||+||....  ...++. ..+++|+.++.+++++|++.+  ++|||+||.++||.  ....+++|+++...  ..+...|
T Consensus       387 iHlAa~~~~~~~~~~~~-~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg~--~~~~~~~E~~~~~~--~~p~~~p  459 (660)
T PRK08125        387 LPLVAIATPIEYTRNPL-RVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYGM--CTDKYFDEDTSNLI--VGPINKQ  459 (660)
T ss_pred             EECccccCchhhccCHH-HHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcCC--CCCCCcCccccccc--cCCCCCC
Confidence            999986542  223444 788999999999999999986  79999999999963  33456788764210  1111235


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC------CCchHHHHHHHH-hCCccccc-cccC-CCeee
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK------FAGSVRSTLAMV-LGNREEYS-ILLN-ISMVH  231 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~------~~~~~~~~~~~~-~~~~~~~~-~~~~-~~~i~  231 (327)
                      .++|+.||.++|.+++.++++++++++++||+++|||+....      ....+..++... .+++..+. .+.+ ++|+|
T Consensus       460 ~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~  539 (660)
T PRK08125        460 RWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTD  539 (660)
T ss_pred             ccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceee
Confidence            578999999999999999988899999999999999975421      112344444433 34444333 2333 89999


Q ss_pred             HHHHHHHHHHhhcCCC---CCceEEEec-c-ccCHHHHHHHHHHhCCCCC----CCCCCCCc----------cccccccc
Q 020334          232 IDDVARAHIFLLEYPD---AKGRYICSS-A-KLTIQEMAEFLSAKHPEYP----IPNVDSLS----------EIEGYKLS  292 (327)
Q Consensus       232 v~D~a~~~~~~~~~~~---~~~~y~~~~-~-~~s~~e~~~~i~~~~~~~~----~~~~~~~~----------~~~~~~~~  292 (327)
                      ++|+|++++.+++++.   .+++||+++ + .+|++|+++.+.+.++...    .+......          ........
T Consensus       540 v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (660)
T PRK08125        540 IRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKGYQDVEHR  619 (660)
T ss_pred             HHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCcccccccccccccccccccccccc
Confidence            9999999999998753   356899754 4 6999999999999887321    11110000          00123345


Q ss_pred             ccChHHH-HhccccccccHHHHHHHHHHHHHHcCC
Q 020334          293 ALSSKKL-LDICFTYKYGIDEMFDGAIKCCKERGY  326 (327)
Q Consensus       293 ~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~~~  326 (327)
                      .+|++|+ ++|||+|+++++++|+++++|++++.-
T Consensus       620 ~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~  654 (660)
T PRK08125        620 KPSIRNARRLLDWEPKIDMQETIDETLDFFLRTVD  654 (660)
T ss_pred             CCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhccc
Confidence            6799999 889999999999999999999997653

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=3.9e-43  Score=281.83  Aligned_cols=300  Identities=18%  Similarity=0.190  Sum_probs=236.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..++|+||||.||||+||++.|..+||+|++++--.......+.....    .++++.+.-|+..+     ++.++|.|+
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~----~~~fel~~hdv~~p-----l~~evD~Iy   96 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG----HPNFELIRHDVVEP-----LLKEVDQIY   96 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc----CcceeEEEeechhH-----HHHHhhhhh
Confidence            357999999999999999999999999999998844444433333332    36788888888765     667789999


Q ss_pred             EccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           84 HVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        84 h~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      |+|++.+.  .-.++. +++..|+.++.+.+..|++.+  +||++.||+.|||  ++..-|..|+.|....+    -.|.
T Consensus        97 hLAapasp~~y~~npv-ktIktN~igtln~lglakrv~--aR~l~aSTseVYg--dp~~hpq~e~ywg~vnp----igpr  167 (350)
T KOG1429|consen   97 HLAAPASPPHYKYNPV-KTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYG--DPLVHPQVETYWGNVNP----IGPR  167 (350)
T ss_pred             hhccCCCCcccccCcc-ceeeecchhhHHHHHHHHHhC--ceEEEeecccccC--CcccCCCccccccccCc----CCch
Confidence            99987652  223444 888999999999999999998  8999999999996  56666777777655443    2457


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHH-HHhCCccccc-cccC-CCeeeHHHHHHH
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLA-MVLGNREEYS-ILLN-ISMVHIDDVARA  238 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~-~~~i~v~D~a~~  238 (327)
                      .+|...|+.+|.++.+|.++.|+.+.|.|++++|||...-.-.+.+..+.. ++.+.++.+. .+.+ |+|.|++|++++
T Consensus       168 ~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Veg  247 (350)
T KOG1429|consen  168 SCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEG  247 (350)
T ss_pred             hhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHH
Confidence            889999999999999999999999999999999999876554566655544 4566665544 4444 899999999999


Q ss_pred             HHHhhcCCCCCceEE-EeccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHH-HhccccccccHHHHHHH
Q 020334          239 HIFLLEYPDAKGRYI-CSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL-LDICFTYKYGIDEMFDG  316 (327)
Q Consensus       239 ~~~~~~~~~~~~~y~-~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p~~~~~~~l~~  316 (327)
                      ++.+++++..+. +| ++++.+|+.|+++++.+..+....+.+ ......++....-|++++ +.|||.|+.+|+|+|+.
T Consensus       248 ll~Lm~s~~~~p-vNiGnp~e~Tm~elAemv~~~~~~~s~i~~-~~~~~Ddp~kR~pDit~ake~LgW~Pkv~L~egL~~  325 (350)
T KOG1429|consen  248 LLRLMESDYRGP-VNIGNPGEFTMLELAEMVKELIGPVSEIEF-VENGPDDPRKRKPDITKAKEQLGWEPKVSLREGLPL  325 (350)
T ss_pred             HHHHhcCCCcCC-cccCCccceeHHHHHHHHHHHcCCCcceee-cCCCCCCccccCccHHHHHHHhCCCCCCcHHHhhHH
Confidence            999999976554 66 567889999999999998863332221 111124456677899999 88999999999999999


Q ss_pred             HHHHHHH
Q 020334          317 AIKCCKE  323 (327)
Q Consensus       317 ~~~~~~~  323 (327)
                      ++.|+++
T Consensus       326 t~~~fr~  332 (350)
T KOG1429|consen  326 TVTYFRE  332 (350)
T ss_pred             HHHHHHH
Confidence            9999986

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=3.3e-42  Score=304.07  Aligned_cols=305  Identities=16%  Similarity=0.123  Sum_probs=226.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC-CcchhhhhhCC-CCCCCCeEEEeCCCCChhHHHHHhc--CC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE-HKKDLSFLTNL-PGASERLQIFNADLNDPESFDAAIA--GC   79 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~--~~   79 (327)
                      .+++||||||+||||++++++|+++|++|++++|+... ....+..+... .....+++++.+|++|.+.+.++++  ++
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   84 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP   84 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999994321 11122222110 0012358899999999999988887  47


Q ss_pred             CEEEEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCcc-----EEEEeccceeeeecCCCCCcccCCCCCChh
Q 020334           80 AGVIHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVK-----RFVYTSSGSTVYFSGKDVDMLDETFWSDED  152 (327)
Q Consensus        80 d~vih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-----~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~  152 (327)
                      |+|||||+.....  ...+. ..+++|+.++.++++++++.+ ++     +||++||..+||..  . .+++|+++    
T Consensus        85 d~Vih~A~~~~~~~~~~~~~-~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~vyg~~--~-~~~~E~~~----  155 (340)
T PLN02653         85 DEVYNLAAQSHVAVSFEMPD-YTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSEMYGST--P-PPQSETTP----  155 (340)
T ss_pred             CEEEECCcccchhhhhhChh-HHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHHHhCCC--C-CCCCCCCC----
Confidence            9999999975422  22333 677999999999999999887 43     89999999999732  2 26788775    


Q ss_pred             HhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC-CCchHHHHHHHH-hCCcccc--ccccC-C
Q 020334          153 YIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK-FAGSVRSTLAMV-LGNREEY--SILLN-I  227 (327)
Q Consensus       153 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~-~~~~~~~~~~~~-~~~~~~~--~~~~~-~  227 (327)
                           ..|.++|+.||..+|.+++.++++++++++..|+.++|||+.... ....+..++..+ .+.+..+  +.+.+ +
T Consensus       156 -----~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r  230 (340)
T PLN02653        156 -----FHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASR  230 (340)
T ss_pred             -----CCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCccee
Confidence                 356788999999999999999988899999999999999975432 222333333333 3333332  32333 8


Q ss_pred             CeeeHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCC-C--CCCCCCCcccccccccccChHHH-Hhc
Q 020334          228 SMVHIDDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEY-P--IPNVDSLSEIEGYKLSALSSKKL-LDI  302 (327)
Q Consensus       228 ~~i~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~-~--~~~~~~~~~~~~~~~~~~d~~k~-~~l  302 (327)
                      +|+|++|+|++++.++++.. ++.||+ +++++|++|+++.+++..+.. .  +................+|++|+ +.|
T Consensus       231 d~i~v~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  309 (340)
T PLN02653        231 DWGFAGDYVEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYFRPAEVDNLKGDASKAREVL  309 (340)
T ss_pred             cceeHHHHHHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccCCccccccccCCHHHHHHHh
Confidence            99999999999999998753 578986 678899999999999988731 1  11100101112344566899999 889


Q ss_pred             cccccccHHHHHHHHHHHHHH
Q 020334          303 CFTYKYGIDEMFDGAIKCCKE  323 (327)
Q Consensus       303 g~~p~~~~~~~l~~~~~~~~~  323 (327)
                      ||+|+++++|+|+++++||++
T Consensus       310 gw~p~~~l~~gi~~~~~~~~~  330 (340)
T PLN02653        310 GWKPKVGFEQLVKMMVDEDLE  330 (340)
T ss_pred             CCCCCCCHHHHHHHHHHHHHH
Confidence            999999999999999999875

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=6.3e-42  Score=326.65  Aligned_cols=306  Identities=18%  Similarity=0.206  Sum_probs=226.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC--CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHh--cCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH--GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAI--AGCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d   80 (327)
                      +|+|||||||||||++|+++|+++  +++|++++|. .. ......+... ....+++++.+|+.|.+.+..++  .++|
T Consensus         6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~-~~-~~~~~~l~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D   82 (668)
T PLN02260          6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKL-DY-CSNLKNLNPS-KSSPNFKFVKGDIASADLVNYLLITEGID   82 (668)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCC-Cc-cchhhhhhhc-ccCCCeEEEECCCCChHHHHHHHhhcCCC
Confidence            579999999999999999999987  6899999883 21 1111111110 01247899999999998887765  4799


Q ss_pred             EEEEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCC-CcccCCCCCChhHhhhc
Q 020334           81 GVIHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDV-DMLDETFWSDEDYIRKL  157 (327)
Q Consensus        81 ~vih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~-~~~~E~~~~~~~~~~~~  157 (327)
                      +|||+|+.....  ..++. ++++.|+.++.+|+++|++.+.+++|||+||..+|+...... ...+|+++         
T Consensus        83 ~ViHlAa~~~~~~~~~~~~-~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~---------  152 (668)
T PLN02260         83 TIMHFAAQTHVDNSFGNSF-EFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQ---------  152 (668)
T ss_pred             EEEECCCccCchhhhhCHH-HHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCC---------
Confidence            999999976532  22333 788999999999999999876578999999999996332111 12245443         


Q ss_pred             CCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHH-HhCCccccc-cccC-CCeeeHHH
Q 020334          158 DIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAM-VLGNREEYS-ILLN-ISMVHIDD  234 (327)
Q Consensus       158 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~-~~~i~v~D  234 (327)
                      ..|.++|+.+|..+|.+++.+.++++++++++||++||||+...  ...+..+... ..+....+. .+.+ ++|+|++|
T Consensus       153 ~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~--~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~D  230 (668)
T PLN02260        153 LLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCED  230 (668)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCc--ccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHH
Confidence            24677899999999999999988889999999999999998643  2334444333 334444433 2333 79999999


Q ss_pred             HHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCC-CcccccccccccChHHHHhccccccccHHH
Q 020334          235 VARAHIFLLEYPDAKGRYICS-SAKLTIQEMAEFLSAKHPEYPIPNVDS-LSEIEGYKLSALSSKKLLDICFTYKYGIDE  312 (327)
Q Consensus       235 ~a~~~~~~~~~~~~~~~y~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~  312 (327)
                      +|+++..++++...+++||++ ++.+|+.|+++.+++.+|......... .........+.+|++|+++|||+|+++++|
T Consensus       231 va~a~~~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~~lGw~p~~~~~e  310 (668)
T PLN02260        231 VAEAFEVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLKKLGWQERTSWEE  310 (668)
T ss_pred             HHHHHHHHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHHHcCCCCCCCHHH
Confidence            999999999887677899975 678999999999999988321110000 011122334668999998899999999999


Q ss_pred             HHHHHHHHHHHcC
Q 020334          313 MFDGAIKCCKERG  325 (327)
Q Consensus       313 ~l~~~~~~~~~~~  325 (327)
                      +|+++++|+++++
T Consensus       311 gl~~~i~w~~~~~  323 (668)
T PLN02260        311 GLKKTMEWYTSNP  323 (668)
T ss_pred             HHHHHHHHHHhCh
Confidence            9999999998754

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=1.2e-41  Score=302.05  Aligned_cols=303  Identities=17%  Similarity=0.157  Sum_probs=221.0

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCe-EEEEEcCCC-CCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYF-VTTTVRSDP-EHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAG   81 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~   81 (327)
                      |+|||||||||||++++++|+++|++ |+++++... ........+..    ..+++++.+|++|.+++.++++  ++|+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   76 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSD----SERYVFEHADICDRAELDRIFAQHQPDA   76 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhccc----CCceEEEEecCCCHHHHHHHHHhcCCCE
Confidence            47999999999999999999999976 555555221 11111111110    1357889999999999999886  4899


Q ss_pred             EEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhc--------CCccEEEEeccceeeeecCCC--------CCcc
Q 020334           82 VIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKS--------GTVKRFVYTSSGSTVYFSGKD--------VDML  143 (327)
Q Consensus        82 vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~--------~~~~~~v~~SS~~v~~~~~~~--------~~~~  143 (327)
                      |||+|+....  ....+. +++++|+.++.+++++|++.        +.+++|||+||.++|+.....        ..++
T Consensus        77 vih~A~~~~~~~~~~~~~-~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~  155 (352)
T PRK10084         77 VMHLAAESHVDRSITGPA-AFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLF  155 (352)
T ss_pred             EEECCcccCCcchhcCch-hhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCc
Confidence            9999987542  122343 88999999999999999874        125799999999999742111        1235


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHH-HhCCcccc-
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAM-VLGNREEY-  221 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~-  221 (327)
                      +|+++         ..|.+.|+.+|..+|.+++.++++++++++++|++.+|||+...  ...+..++.. ..+....+ 
T Consensus       156 ~E~~~---------~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~--~~~~~~~~~~~~~~~~~~~~  224 (352)
T PRK10084        156 TETTA---------YAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP--EKLIPLVILNALEGKPLPIY  224 (352)
T ss_pred             cccCC---------CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCc--cchHHHHHHHHhcCCCeEEe
Confidence            66654         35678899999999999999988889999999999999998532  2334433333 33444333 


Q ss_pred             ccccC-CCeeeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCC---CCCCCCCc---cc-cccccc
Q 020334          222 SILLN-ISMVHIDDVARAHIFLLEYPDAKGRYICS-SAKLTIQEMAEFLSAKHPEYP---IPNVDSLS---EI-EGYKLS  292 (327)
Q Consensus       222 ~~~~~-~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~e~~~~i~~~~~~~~---~~~~~~~~---~~-~~~~~~  292 (327)
                      +.+.+ ++|+|++|+|+++..+++++..+++||++ ++.+|++|+++.+++.++...   .+......   .. .....+
T Consensus       225 ~~g~~~~~~v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  304 (352)
T PRK10084        225 GKGDQIRDWLYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPGHDRRY  304 (352)
T ss_pred             CCCCeEEeeEEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhccccccCCCCCcee
Confidence            33333 89999999999999999876667899975 678999999999999887321   11100110   01 123356


Q ss_pred             ccChHHH-HhccccccccHHHHHHHHHHHHHHc
Q 020334          293 ALSSKKL-LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       293 ~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      .+|++|+ ++|||+|+++++++|+++++|++++
T Consensus       305 ~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~  337 (352)
T PRK10084        305 AIDASKISRELGWKPQETFESGIRKTVEWYLAN  337 (352)
T ss_pred             eeCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhC
Confidence            7899999 7799999999999999999999874

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=4.3e-41  Score=295.98  Aligned_cols=301  Identities=32%  Similarity=0.420  Sum_probs=227.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      |+||||||+||||+++++.|+++|++|++++| ++.....+   .     ..+++++.+|+.|.+++.++++++|+|||+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~---~-----~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~   71 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVR-PTSDRRNL---E-----GLDVEIVEGDLRDPASLRKAVAGCRALFHV   71 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEe-cCcccccc---c-----cCCceEEEeeCCCHHHHHHHHhCCCEEEEe
Confidence            47999999999999999999999999999999 43322111   1     136889999999999999999999999999


Q ss_pred             cCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhH
Q 020334           86 AAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYV  165 (327)
Q Consensus        86 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~  165 (327)
                      |+........+. ..++.|+.++.++++++++.+ +++||++||.++|+.. ....+++|+++...      ..+.++|+
T Consensus        72 a~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~-~~~~~~~e~~~~~~------~~~~~~Y~  142 (328)
T TIGR03466        72 AADYRLWAPDPE-EMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVR-GDGTPADETTPSSL------DDMIGHYK  142 (328)
T ss_pred             ceecccCCCCHH-HHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcC-CCCCCcCccCCCCc------ccccChHH
Confidence            986554444444 889999999999999999887 8999999999998632 33456788765211      11245799


Q ss_pred             hhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcC
Q 020334          166 LTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                      .+|..+|+.++.++++++++++++||+.+|||+...... ....+.....+. ........++|+|++|+|++++.++++
T Consensus       143 ~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~i~v~D~a~a~~~~~~~  220 (328)
T TIGR03466       143 RSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTP-TGRIIVDFLNGK-MPAYVDTGLNLVHVDDVAEGHLLALER  220 (328)
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCc-HHHHHHHHHcCC-CceeeCCCcceEEHHHHHHHHHHHHhC
Confidence            999999999999988789999999999999997543211 111122222222 222222347899999999999999988


Q ss_pred             CCCCceEEEeccccCHHHHHHHHHHhCCCC----CCCCCC---------------CCccc-------ccccccccChHHH
Q 020334          246 PDAKGRYICSSAKLTIQEMAEFLSAKHPEY----PIPNVD---------------SLSEI-------EGYKLSALSSKKL  299 (327)
Q Consensus       246 ~~~~~~y~~~~~~~s~~e~~~~i~~~~~~~----~~~~~~---------------~~~~~-------~~~~~~~~d~~k~  299 (327)
                      +..+..|+++++.+|++|+++.+.+.++..    .+|...               .....       ....+..+|++|+
T Consensus       221 ~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  300 (328)
T TIGR03466       221 GRIGERYILGGENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKA  300 (328)
T ss_pred             CCCCceEEecCCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHH
Confidence            665667888888999999999999988731    111100               00000       0013467899999


Q ss_pred             -HhccccccccHHHHHHHHHHHHHHcCCC
Q 020334          300 -LDICFTYKYGIDEMFDGAIKCCKERGYL  327 (327)
Q Consensus       300 -~~lg~~p~~~~~~~l~~~~~~~~~~~~~  327 (327)
                       +.|||+|+ +++++|+++++|++++|+|
T Consensus       301 ~~~lg~~p~-~~~~~i~~~~~~~~~~~~~  328 (328)
T TIGR03466       301 VRELGYRQR-PAREALRDAVEWFRANGYL  328 (328)
T ss_pred             HHHcCCCCc-CHHHHHHHHHHHHHHhCCC
Confidence             88999997 9999999999999999986

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=5.6e-42  Score=298.74  Aligned_cols=287  Identities=20%  Similarity=0.230  Sum_probs=204.9

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh---hHH-HHHhc-----C
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP---ESF-DAAIA-----G   78 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~-~~~~~-----~   78 (327)
                      |||||||||||++|+++|+++|++++++.|+... ....            ..+..+|+.|.   +.+ .+++.     +
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~-~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   68 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD-GTKF------------VNLVDLDIADYMDKEDFLAQIMAGDDFGD   68 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCc-chHH------------HhhhhhhhhhhhhHHHHHHHHhcccccCC
Confidence            8999999999999999999999987777663322 1110            01223455443   332 33332     6


Q ss_pred             CCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcC
Q 020334           79 CAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLD  158 (327)
Q Consensus        79 ~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (327)
                      +|+|||+||.......+.. .+++.|+.++.+|+++|++.+ + +|||+||.++|+.  ....+.+|+++         .
T Consensus        69 ~d~Vih~A~~~~~~~~~~~-~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~vyg~--~~~~~~~E~~~---------~  134 (308)
T PRK11150         69 IEAIFHEGACSSTTEWDGK-YMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGG--RTDDFIEEREY---------E  134 (308)
T ss_pred             ccEEEECceecCCcCCChH-HHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchHHhCc--CCCCCCccCCC---------C
Confidence            8999999986443322333 678999999999999999987 5 6999999999963  23345667654         3


Q ss_pred             CCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC--CCchHHHHHHHH-hCCcccccccc---CCCeeeH
Q 020334          159 IWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK--FAGSVRSTLAMV-LGNREEYSILL---NISMVHI  232 (327)
Q Consensus       159 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~---~~~~i~v  232 (327)
                      .|.++|+.+|..+|++++.++.+.+++++++||+++|||+....  .......+...+ .+....+..+.   .++|+|+
T Consensus       135 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v  214 (308)
T PRK11150        135 KPLNVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYV  214 (308)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeH
Confidence            56678999999999999999887899999999999999986432  222333333333 33333232222   2899999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCccc--ccccccccChHHHHhccccccc-
Q 020334          233 DDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEI--EGYKLSALSSKKLLDICFTYKY-  308 (327)
Q Consensus       233 ~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~k~~~lg~~p~~-  308 (327)
                      +|+|++++.+++.. .+++||+ +++.+|+.|+++.+.+.++...+.........  ........|++|++.+||+|+. 
T Consensus       215 ~D~a~a~~~~~~~~-~~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~g~~p~~~  293 (308)
T PRK11150        215 GDVAAVNLWFWENG-VSGIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFPDKLKGRYQAFTQADLTKLRAAGYDKPFK  293 (308)
T ss_pred             HHHHHHHHHHHhcC-CCCeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCccccccccceecccCHHHHHhcCCCCCCC
Confidence            99999999998875 3579997 56779999999999998873222111011111  1123456899999778999875 


Q ss_pred             cHHHHHHHHHHHHH
Q 020334          309 GIDEMFDGAIKCCK  322 (327)
Q Consensus       309 ~~~~~l~~~~~~~~  322 (327)
                      +++++|+++++|+.
T Consensus       294 ~~~~gl~~~~~~~~  307 (308)
T PRK11150        294 TVAEGVAEYMAWLN  307 (308)
T ss_pred             CHHHHHHHHHHHhh
Confidence            99999999999975

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=4.9e-41  Score=294.18  Aligned_cols=302  Identities=18%  Similarity=0.174  Sum_probs=225.4

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCC-CCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC--CCE
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDP-EHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG--CAG   81 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~   81 (327)
                      +|||||||||||++++++|+++|  ++|++++|... ........+..    .++++++.+|+.|++++.+++++  +|+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~   76 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED----NPRYRFVKGDIGDRELVSRLFTEHQPDA   76 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc----CCCcEEEEcCCcCHHHHHHHHhhcCCCE
Confidence            59999999999999999999987  78998877321 11111111111    14688999999999999999886  899


Q ss_pred             EEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           82 VIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        82 vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |||+|+....  ....+. .++++|+.++.++++++++.....++||+||.++|+.. ....+++|+++         ..
T Consensus        77 vi~~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~-~~~~~~~e~~~---------~~  145 (317)
T TIGR01181        77 VVHFAAESHVDRSISGPA-AFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDL-EKGDAFTETTP---------LA  145 (317)
T ss_pred             EEEcccccCchhhhhCHH-HHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCC-CCCCCcCCCCC---------CC
Confidence            9999987542  222333 78899999999999999987522489999999999733 22235777764         24


Q ss_pred             CchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHH-hCCcccc-ccccC-CCeeeHHHHH
Q 020334          160 WGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-LGNREEY-SILLN-ISMVHIDDVA  236 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~i~v~D~a  236 (327)
                      |.+.|+.+|..+|.+++.++.+.+++++++||+.+|||....  ...+..++... .+....+ ..+.+ ++|+|++|++
T Consensus       146 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a  223 (317)
T TIGR01181       146 PSSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFP--EKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHC  223 (317)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCc--ccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHH
Confidence            567899999999999999988889999999999999997543  23444444433 3333333 22222 7999999999


Q ss_pred             HHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCc-ccccccccccChHHH-HhccccccccHHHH
Q 020334          237 RAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLS-EIEGYKLSALSSKKL-LDICFTYKYGIDEM  313 (327)
Q Consensus       237 ~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~-~~lg~~p~~~~~~~  313 (327)
                      +++..++++...+++||+ +++.+|++|+++.+.+.++...... .... .......+.+|++|+ +.|||+|+++++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~~~~~  302 (317)
T TIGR01181       224 RAIYLVLEKGRVGETYNIGGGNERTNLEVVETILELLGKDEDLI-THVEDRPGHDRRYAIDASKIKRELGWAPKYTFEEG  302 (317)
T ss_pred             HHHHHHHcCCCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccc-cccCCCccchhhhcCCHHHHHHHhCCCCCCcHHHH
Confidence            999999987766779997 5678999999999999988321110 0100 112223446899999 78999999899999


Q ss_pred             HHHHHHHHHHcCC
Q 020334          314 FDGAIKCCKERGY  326 (327)
Q Consensus       314 l~~~~~~~~~~~~  326 (327)
                      ++++++||+++.+
T Consensus       303 i~~~~~~~~~~~~  315 (317)
T TIGR01181       303 LRKTVQWYLDNEW  315 (317)
T ss_pred             HHHHHHHHHhccC
Confidence            9999999988754

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=7.1e-42  Score=281.27  Aligned_cols=307  Identities=20%  Similarity=0.213  Sum_probs=239.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v   82 (327)
                      .++||||||+||||+|.+.+|+++|+.|.+++.-+......++..........++.++++|++|.+.++++|+  ++|.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            5789999999999999999999999999998874443333333333332224689999999999999999997  68999


Q ss_pred             EEccCCCC--CCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           83 IHVAAPID--IDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        83 ih~a~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      +|+|+...  .+-+.+. .++..|+.++.+|++.|++++ ++.+||.||+.+||  .+...|++|+++.        ..|
T Consensus        82 ~Hfa~~~~vgeS~~~p~-~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG--~p~~ip~te~~~t--------~~p  149 (343)
T KOG1371|consen   82 MHFAALAAVGESMENPL-SYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYG--LPTKVPITEEDPT--------DQP  149 (343)
T ss_pred             EeehhhhccchhhhCch-hheehhhhhHHHHHHHHHHcC-CceEEEecceeeec--CcceeeccCcCCC--------CCC
Confidence            99998755  4455665 899999999999999999999 99999999999996  5667899999863        236


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceec--CCCCCC-----CCc-hHHHHHH---------HHhCCcccccc
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVG--PFICPK-----FAG-SVRSTLA---------MVLGNREEYSI  223 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G--~~~~~~-----~~~-~~~~~~~---------~~~~~~~~~~~  223 (327)
                      .++|+.+|...|+++..+....+..++.||.++++|  |.....     ++. .++....         ...+......+
T Consensus       150 ~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~d  229 (343)
T KOG1371|consen  150 TNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTID  229 (343)
T ss_pred             CCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccC
Confidence            889999999999999999988899999999999999  432111     111 1111111         11222222222


Q ss_pred             ccC-CCeeeHHHHHHHHHHhhcCCCC---CceEEE-eccccCHHHHHHHHHHhCC-CCCCCCCCCCcccccccccccChH
Q 020334          224 LLN-ISMVHIDDVARAHIFLLEYPDA---KGRYIC-SSAKLTIQEMAEFLSAKHP-EYPIPNVDSLSEIEGYKLSALSSK  297 (327)
Q Consensus       224 ~~~-~~~i~v~D~a~~~~~~~~~~~~---~~~y~~-~~~~~s~~e~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~  297 (327)
                      +.. +++||+-|.|+..+.++++...   -++||. ++...|+.+++..++++.| ..+.+.  ...+..+......+.+
T Consensus       230 gt~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~--v~~R~gdv~~~ya~~~  307 (343)
T KOG1371|consen  230 GTIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKV--VPRRNGDVAFVYANPS  307 (343)
T ss_pred             CCeeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccc--cCCCCCCceeeeeChH
Confidence            222 8999999999999999988653   348994 7888999999999999998 333332  2224456677888999


Q ss_pred             HH-HhccccccccHHHHHHHHHHHHHHcC
Q 020334          298 KL-LDICFTYKYGIDEMFDGAIKCCKERG  325 (327)
Q Consensus       298 k~-~~lg~~p~~~~~~~l~~~~~~~~~~~  325 (327)
                      ++ ++|||+|+++++++++++++|..++.
T Consensus       308 ~a~~elgwk~~~~iee~c~dlw~W~~~np  336 (343)
T KOG1371|consen  308 KAQRELGWKAKYGLQEMLKDLWRWQKQNP  336 (343)
T ss_pred             HHHHHhCCccccCHHHHHHHHHHHHhcCC
Confidence            98 99999999999999999999998764

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=1.3e-40  Score=294.06  Aligned_cols=304  Identities=16%  Similarity=0.188  Sum_probs=221.7

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi   83 (327)
                      |+|||||||||||++++++|+++|++|++++|...........+....  ..++.++.+|++|.+.+.+++.  ++|+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv   78 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALLTEILHDHAIDTVI   78 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhc--CCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence            479999999999999999999999999999873222222111111111  1356788999999999988886  689999


Q ss_pred             EccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           84 HVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        84 h~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      |+|+.....  ..... +.++.|+.++.+++++|++.+ +++||++||+.+|+  .....+++|+++.        ..|.
T Consensus        79 h~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg--~~~~~~~~E~~~~--------~~p~  146 (338)
T PRK10675         79 HFAGLKAVGESVQKPL-EYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYG--DQPKIPYVESFPT--------GTPQ  146 (338)
T ss_pred             ECCccccccchhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhC--CCCCCccccccCC--------CCCC
Confidence            999865421  22333 789999999999999999987 88999999999986  3344567888752        2456


Q ss_pred             hhhHhhhHHHHHHHHHHHHHc-CCcEEEEecCceecCCCCCC-------CC-chHHHHHHHHhCCcccc---------cc
Q 020334          162 KSYVLTKTLTERAALEFAEEH-GLDLVTLIPSFVVGPFICPK-------FA-GSVRSTLAMVLGNREEY---------SI  223 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~R~~~v~G~~~~~~-------~~-~~~~~~~~~~~~~~~~~---------~~  223 (327)
                      ++|+.+|..+|++++.++++. +++++++|++++|||.....       .+ ..+..+.....+....+         +.
T Consensus       147 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (338)
T PRK10675        147 SPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTED  226 (338)
T ss_pred             ChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCC
Confidence            789999999999999998654 89999999999999853211       11 12333333333322111         12


Q ss_pred             ccC-CCeeeHHHHHHHHHHhhcCC--C-CCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHH
Q 020334          224 LLN-ISMVHIDDVARAHIFLLEYP--D-AKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKK  298 (327)
Q Consensus       224 ~~~-~~~i~v~D~a~~~~~~~~~~--~-~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k  298 (327)
                      +.+ ++|+|++|+|++++.+++..  . .+++||+ +++.+|++|+++.+.+.++. +.+...............+|++|
T Consensus       227 g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~k  305 (338)
T PRK10675        227 GTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGK-PVNYHFAPRREGDLPAYWADASK  305 (338)
T ss_pred             CcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCC-CCCeeeCCCCCCchhhhhcCHHH
Confidence            222 79999999999999998752  2 2358997 56789999999999999883 22221011111223456689999


Q ss_pred             H-HhccccccccHHHHHHHHHHHHHHc
Q 020334          299 L-LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       299 ~-~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      + +.|||+|+++++++|+++++|++++
T Consensus       306 ~~~~lg~~p~~~~~~~~~~~~~~~~~~  332 (338)
T PRK10675        306 ADRELNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_pred             HHHHhCCCCcCcHHHHHHHHHHHHHhh
Confidence            9 8899999999999999999999863

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=5.1e-41  Score=292.64  Aligned_cols=282  Identities=18%  Similarity=0.194  Sum_probs=211.8

Q ss_pred             EEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEEEEcc
Q 020334            9 CVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGVIHVA   86 (327)
Q Consensus         9 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih~a   86 (327)
                      ||||||||||++|+++|++.|++|+++.+ .                      ..+|+.|.+++.++++  ++|+|||||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~-~----------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A   57 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRT-H----------------------KELDLTRQADVEAFFAKEKPTYVILAA   57 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeec-c----------------------ccCCCCCHHHHHHHHhccCCCEEEEee
Confidence            69999999999999999999998876543 1                      1389999999998887  579999999


Q ss_pred             CCCCC---CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch-
Q 020334           87 APIDI---DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK-  162 (327)
Q Consensus        87 ~~~~~---~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~-  162 (327)
                      +....   ...++. ++++.|+.++.+|+++|++.+ +++|||+||+.+|+  +....+++|+++...    + ..|.+ 
T Consensus        58 ~~~~~~~~~~~~~~-~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg--~~~~~~~~E~~~~~~----~-~~p~~~  128 (306)
T PLN02725         58 AKVGGIHANMTYPA-DFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYP--KFAPQPIPETALLTG----P-PEPTNE  128 (306)
T ss_pred             eeecccchhhhCcH-HHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecC--CCCCCCCCHHHhccC----C-CCCCcc
Confidence            87542   223444 789999999999999999988 89999999999996  334567888763210    0 12333 


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC--CCchHHHHH----HH-HhCCcccc--ccccC-CCeeeH
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK--FAGSVRSTL----AM-VLGNREEY--SILLN-ISMVHI  232 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~----~~-~~~~~~~~--~~~~~-~~~i~v  232 (327)
                      .|+.+|..+|++++.+.++.+++++++||+.+|||+....  ....+..++    .. ..+.+..+  ..+.+ ++|+|+
T Consensus       129 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  208 (306)
T PLN02725        129 WYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHV  208 (306)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccH
Confidence            5999999999999999888899999999999999975321  112222222    22 23333332  22233 799999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCC-CCCCCCCCCcccccccccccChHHHHhccccccccH
Q 020334          233 DDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPE-YPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKYGI  310 (327)
Q Consensus       233 ~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~  310 (327)
                      +|++++++.++++....+.||+ ++..+|+.|+++.+++.++. ..+..  ............+|++|+++|||+|++++
T Consensus       209 ~Dv~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~d~~k~~~lg~~p~~~~  286 (306)
T PLN02725        209 DDLADAVVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVW--DTSKPDGTPRKLMDSSKLRSLGWDPKFSL  286 (306)
T ss_pred             HHHHHHHHHHHhccccCcceEeCCCCcccHHHHHHHHHHHhCCCCceee--cCCCCCcccccccCHHHHHHhCCCCCCCH
Confidence            9999999999987655678887 46789999999999998872 11111  11111223346689999977999999999


Q ss_pred             HHHHHHHHHHHHHc
Q 020334          311 DEMFDGAIKCCKER  324 (327)
Q Consensus       311 ~~~l~~~~~~~~~~  324 (327)
                      +++|+++++|++++
T Consensus       287 ~~~l~~~~~~~~~~  300 (306)
T PLN02725        287 KDGLQETYKWYLEN  300 (306)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999999875

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=9.5e-41  Score=288.90  Aligned_cols=273  Identities=16%  Similarity=0.091  Sum_probs=204.7

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi   83 (327)
                      |+||||||+||||++|+++|+++| +|++++|..                    ..+.+|++|.+.+.++++  ++|+||
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~--------------------~~~~~Dl~d~~~~~~~~~~~~~D~Vi   59 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHS--------------------TDYCGDFSNPEGVAETVRKIRPDVIV   59 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEecccc--------------------ccccCCCCCHHHHHHHHHhcCCCEEE
Confidence            479999999999999999999999 799888821                    124589999999999887  589999


Q ss_pred             EccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           84 HVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        84 h~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      |||+.....  ..++. ..+.+|+.++.+|+++|++.+  .+|||+||..||+  .....+++|+++         ..|.
T Consensus        60 h~Aa~~~~~~~~~~~~-~~~~~N~~~~~~l~~aa~~~g--~~~v~~Ss~~Vy~--~~~~~p~~E~~~---------~~P~  125 (299)
T PRK09987         60 NAAAHTAVDKAESEPE-FAQLLNATSVEAIAKAANEVG--AWVVHYSTDYVFP--GTGDIPWQETDA---------TAPL  125 (299)
T ss_pred             ECCccCCcchhhcCHH-HHHHHHHHHHHHHHHHHHHcC--CeEEEEccceEEC--CCCCCCcCCCCC---------CCCC
Confidence            999976532  23333 778899999999999999988  4799999999996  334457888875         3567


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHh-CCccccccc---cC-CCeeeHHHHH
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVL-GNREEYSIL---LN-ISMVHIDDVA  236 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~-~~~i~v~D~a  236 (327)
                      ++|+.+|..+|+++..++    .+.+++|++++|||+..    .++..++..+. +....+...   .+ +.+.+++|++
T Consensus       126 ~~Yg~sK~~~E~~~~~~~----~~~~ilR~~~vyGp~~~----~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~  197 (299)
T PRK09987        126 NVYGETKLAGEKALQEHC----AKHLIFRTSWVYAGKGN----NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTA  197 (299)
T ss_pred             CHHHHHHHHHHHHHHHhC----CCEEEEecceecCCCCC----CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHH
Confidence            899999999999997654    45799999999999643    23444444433 333333222   22 4566788888


Q ss_pred             HHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCC--CCCC-----C--CCCC-cccccccccccChHHH-Hhccc
Q 020334          237 RAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPE--YPIP-----N--VDSL-SEIEGYKLSALSSKKL-LDICF  304 (327)
Q Consensus       237 ~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~--~~~~-----~--~~~~-~~~~~~~~~~~d~~k~-~~lg~  304 (327)
                      +++..++..+...|+||+ +++.+|+.|+++.+.+..+.  .+.+     .  .... ....++.+..+|++|+ +.|||
T Consensus       198 ~~~~~~~~~~~~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~~~~lg~  277 (299)
T PRK09987        198 HAIRVALNKPEVAGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFAL  277 (299)
T ss_pred             HHHHHhhccCCCCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHHHHHhCC
Confidence            888888766555679996 56789999999999775331  1111     0  0001 1123566778999999 77999


Q ss_pred             cccccHHHHHHHHHHHHH
Q 020334          305 TYKYGIDEMFDGAIKCCK  322 (327)
Q Consensus       305 ~p~~~~~~~l~~~~~~~~  322 (327)
                      +|+ +|+++|+++++.+.
T Consensus       278 ~~~-~~~~~l~~~~~~~~  294 (299)
T PRK09987        278 VLP-DWQVGVKRMLTELF  294 (299)
T ss_pred             CCc-cHHHHHHHHHHHHh
Confidence            997 99999999998654

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.9e-40  Score=287.50  Aligned_cols=297  Identities=26%  Similarity=0.284  Sum_probs=228.1

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCC-CEEEEc
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGC-AGVIHV   85 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-d~vih~   85 (327)
                      +|||||||||||++|++.|+++|++|++++|... ......         .++.++.+|+.|.+.+.++.... |+|||+
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~   71 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRD-GLDPLL---------SGVEFVVLDLTDRDLVDELAKGVPDAVIHL   71 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCc-cccccc---------cccceeeecccchHHHHHHHhcCCCEEEEc
Confidence            4999999999999999999999999999999433 222111         25788999999998888888877 999999


Q ss_pred             cCCCCCCCCc--hHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCC-CCCChhHhhhcCCCch
Q 020334           86 AAPIDIDGKE--TEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDET-FWSDEDYIRKLDIWGK  162 (327)
Q Consensus        86 a~~~~~~~~~--~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~-~~~~~~~~~~~~~~~~  162 (327)
                      |+........  ....+++.|+.++.+++++|++.+ +++|||.||.++|+.. ....+++|+ .+         ..|.+
T Consensus        72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~~~-~~~~~~~E~~~~---------~~p~~  140 (314)
T COG0451          72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGD-PPPLPIDEDLGP---------PRPLN  140 (314)
T ss_pred             cccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceECCC-CCCCCcccccCC---------CCCCC
Confidence            9987633222  122689999999999999999966 9999998888888643 334478887 33         24455


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCc-hHHHHH-HHHhCCc-cccccccC--CCeeeHHHHHH
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAG-SVRSTL-AMVLGNR-EEYSILLN--ISMVHIDDVAR  237 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~-~~~~~~-~~~~~~~-~~~~~~~~--~~~i~v~D~a~  237 (327)
                      +|+.+|..+|..+..+.++.+++++++||+++|||+.....+. ....+. ....+.+ ......+.  ++++|++|+++
T Consensus       141 ~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  220 (314)
T COG0451         141 PYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVAD  220 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHH
Confidence            8999999999999999987799999999999999997765333 333222 2334454 33332322  68999999999


Q ss_pred             HHHHhhcCCCCCceEEEec-c-ccCHHHHHHHHHHhCCCCCC--CCCCCCcccccccccccChHHH-HhccccccccHHH
Q 020334          238 AHIFLLEYPDAKGRYICSS-A-KLTIQEMAEFLSAKHPEYPI--PNVDSLSEIEGYKLSALSSKKL-LDICFTYKYGIDE  312 (327)
Q Consensus       238 ~~~~~~~~~~~~~~y~~~~-~-~~s~~e~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p~~~~~~  312 (327)
                      +++.+++++..+ .||+++ . ..|++|+++.+.+..+....  ................+|++|. +.|||.|+.++++
T Consensus       221 ~~~~~~~~~~~~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~  299 (314)
T COG0451         221 ALLLALENPDGG-VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAALGWEPKVSLEE  299 (314)
T ss_pred             HHHHHHhCCCCc-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCCCCCCcccccccCCHHHHHHHhCCCCCCCHHH
Confidence            999999998777 999754 4 79999999999998883322  1100101223455678899999 8999999999999


Q ss_pred             HHHHHHHHHHHcC
Q 020334          313 MFDGAIKCCKERG  325 (327)
Q Consensus       313 ~l~~~~~~~~~~~  325 (327)
                      ++.++++|+....
T Consensus       300 ~i~~~~~~~~~~~  312 (314)
T COG0451         300 GLADTLEWLLKKL  312 (314)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998654

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=7.2e-39  Score=284.31  Aligned_cols=299  Identities=29%  Similarity=0.420  Sum_probs=213.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCC---CCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPG---ASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      ++|+||||||+||||++++++|+++|++|+++.| +......+..+.....   ...+++++.+|++|.+.+.++++++|
T Consensus        52 ~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r-~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~d  130 (367)
T PLN02686         52 EARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVD-TQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGCA  130 (367)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhcc
Confidence            4689999999999999999999999999999888 4332222222211000   01257889999999999999999999


Q ss_pred             EEEEccCCCCCCC-CchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccc--eeeeecCCC--CCcccCCCCCChhHhh
Q 020334           81 GVIHVAAPIDIDG-KETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSG--STVYFSGKD--VDMLDETFWSDEDYIR  155 (327)
Q Consensus        81 ~vih~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~--~v~~~~~~~--~~~~~E~~~~~~~~~~  155 (327)
                      .|||+|+...... ........+.|+.++.+++++|++...+++|||+||.  .+|+.....  ...++|+++.....  
T Consensus       131 ~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~--  208 (367)
T PLN02686        131 GVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESF--  208 (367)
T ss_pred             EEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhh--
Confidence            9999998754221 1111256788999999999999986238999999996  466521111  23477776543221  


Q ss_pred             hcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHH
Q 020334          156 KLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDV  235 (327)
Q Consensus       156 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  235 (327)
                       ...|.++|+.+|..+|.+++.++++.+++++++||+++|||+.....+..+   .....+. ..+...+.++|+||+|+
T Consensus       209 -~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~---~~~~~g~-~~~~g~g~~~~v~V~Dv  283 (367)
T PLN02686        209 -CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTAT---IAYLKGA-QEMLADGLLATADVERL  283 (367)
T ss_pred             -cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhH---HHHhcCC-CccCCCCCcCeEEHHHH
Confidence             124566899999999999999988889999999999999997543222222   2222332 22222344689999999


Q ss_pred             HHHHHHhhcCC---CCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCcc-cccccccccChHHH-HhccccccccH
Q 020334          236 ARAHIFLLEYP---DAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSE-IEGYKLSALSSKKL-LDICFTYKYGI  310 (327)
Q Consensus       236 a~~~~~~~~~~---~~~~~y~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~k~-~~lg~~p~~~~  310 (327)
                      |++++.+++..   ..+++|+++++.+|++|+++.+.+.++. +.+......+ ..+...+.+|++|+ +.|||+|+-++
T Consensus       284 a~A~~~al~~~~~~~~~~~yi~~g~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~d~~~~~~d~~kl~~~l~~~~~~~~  362 (367)
T PLN02686        284 AEAHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELARQIGL-PINKIAGNSSSDDTPARFELSNKKLSRLMSRTRRCCY  362 (367)
T ss_pred             HHHHHHHHhccCCCCCCCcEEEeCCCccHHHHHHHHHHHcCC-CCCcCCCchhhcCCcccccccHHHHHHHHHHhhhccc
Confidence            99999999852   3456887888999999999999999872 1121111112 24566788999999 89999997544


Q ss_pred             H
Q 020334          311 D  311 (327)
Q Consensus       311 ~  311 (327)
                      +
T Consensus       363 ~  363 (367)
T PLN02686        363 D  363 (367)
T ss_pred             c
Confidence            3

>PLN02583 cinnamoyl-CoA reductase

Probab=100.00  E-value=2.6e-38  Score=273.59  Aligned_cols=286  Identities=25%  Similarity=0.413  Sum_probs=210.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +++|||||||||||++++++|+++|++|++++|+ +........+........+++++.+|++|.+.+.+++.++|.|+|
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~-~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~   84 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQK-NGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC   84 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcC-chhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            5789999999999999999999999999999993 222111111111111124688999999999999999999999999


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecC---CCCCcccCCCCCChhHhhhcCCCc
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSG---KDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~---~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      +++........+. +.+++|+.++.++++++.+...+++||++||..+++.++   ....+++|++|.......   .+.
T Consensus        85 ~~~~~~~~~~~~~-~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~---~~~  160 (297)
T PLN02583         85 CFDPPSDYPSYDE-KMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCR---KFK  160 (297)
T ss_pred             eCccCCcccccHH-HHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHh---hcc
Confidence            8865432222333 889999999999999998863378999999987764231   123467888775433221   122


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHH
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIF  241 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  241 (327)
                      ..|+.||..+|+.++.++++.+++++++||+.||||+......        .+.+.. .....+.++|+||+|+|++++.
T Consensus       161 ~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~--------~~~~~~-~~~~~~~~~~v~V~Dva~a~~~  231 (297)
T PLN02583        161 LWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNP--------YLKGAA-QMYENGVLVTVDVNFLVDAHIR  231 (297)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchh--------hhcCCc-ccCcccCcceEEHHHHHHHHHH
Confidence            3699999999999999988789999999999999997543211        111111 1112334689999999999999


Q ss_pred             hhcCCCCCceEEEeccccC-HHHHHHHHHHhCCCCCCCCCCCCccc-ccccccccChHHHHhccccc
Q 020334          242 LLEYPDAKGRYICSSAKLT-IQEMAEFLSAKHPEYPIPNVDSLSEI-EGYKLSALSSKKLLDICFTY  306 (327)
Q Consensus       242 ~~~~~~~~~~y~~~~~~~s-~~e~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~k~~~lg~~p  306 (327)
                      +++.+..++.|++.++..+ ..++++++.+.+|..+.+..  ..+. .......++++|+++|||+.
T Consensus       232 al~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~k~~~l~~~~  296 (297)
T PLN02583        232 AFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPPP--YEMQGSEVYQQRIRNKKLNKLMEDF  296 (297)
T ss_pred             HhcCcccCCcEEEecCCCccHHHHHHHHHHhCCCCCCCCc--ccccCCCccccccChHHHHHhCccc
Confidence            9998877789999887766 57899999999997666541  1111 22345678999999999975

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=1.4e-38  Score=278.38  Aligned_cols=289  Identities=18%  Similarity=0.156  Sum_probs=211.4

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----CCCEE
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----GCAGV   82 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~v   82 (327)
                      |||||||||||+++++.|+++|+ +|++++|... . ..+..+        ....+.+|+.+.+.++.+.+    ++|+|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~-~-~~~~~~--------~~~~~~~d~~~~~~~~~~~~~~~~~~D~v   70 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRD-G-HKFLNL--------ADLVIADYIDKEDFLDRLEKGAFGKIEAI   70 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCC-c-hhhhhh--------hheeeeccCcchhHHHHHHhhccCCCCEE
Confidence            69999999999999999999997 7888877322 1 111111        11356788888887776654    79999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      ||||+.......++. ..+++|+.++.+++++|++.+ + +|||+||.++|+..   ..+++|+++.        ..|.+
T Consensus        71 vh~A~~~~~~~~~~~-~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~---~~~~~e~~~~--------~~p~~  136 (314)
T TIGR02197        71 FHQGACSDTTETDGE-YMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDG---EAGFREGREL--------ERPLN  136 (314)
T ss_pred             EECccccCccccchH-HHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCC---CCCcccccCc--------CCCCC
Confidence            999997654444544 788999999999999999887 5 79999999999632   2345666531        23577


Q ss_pred             hhHhhhHHHHHHHHHHHHH--cCCcEEEEecCceecCCCCCC--CCchHHHHHHH-HhCCcccc-------ccccC-CCe
Q 020334          163 SYVLTKTLTERAALEFAEE--HGLDLVTLIPSFVVGPFICPK--FAGSVRSTLAM-VLGNREEY-------SILLN-ISM  229 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~--~~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~~~-~~~~~~~~-------~~~~~-~~~  229 (327)
                      +|+.+|..+|.+++.+..+  .+++++++||+.+|||+....  ....+..+... ..+....+       +.+.+ ++|
T Consensus       137 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  216 (314)
T TIGR02197       137 VYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDF  216 (314)
T ss_pred             HHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeee
Confidence            8999999999999876432  367999999999999986432  22333333333 33333322       11222 799


Q ss_pred             eeHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCC-CCCCCCCccc---ccccccccChHHH-Hhcc
Q 020334          230 VHIDDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYP-IPNVDSLSEI---EGYKLSALSSKKL-LDIC  303 (327)
Q Consensus       230 i~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~-~~~~~~~~~~---~~~~~~~~d~~k~-~~lg  303 (327)
                      +|++|+++++..++.+ ..+++||+ +++++|++|+++.+++.++... +... +.+..   .......+|++|+ +.+|
T Consensus       217 i~v~D~a~~i~~~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~~~l~  294 (314)
T TIGR02197       217 VYVKDVVDVNLWLLEN-GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYI-PMPEALRGKYQYFTQADITKLRAAGY  294 (314)
T ss_pred             EEHHHHHHHHHHHHhc-ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceec-cCccccccccccccccchHHHHHhcC
Confidence            9999999999999988 56779996 5678999999999999888211 1111 11111   1123456899999 8889


Q ss_pred             ccccccHHHHHHHHHHHHH
Q 020334          304 FTYKYGIDEMFDGAIKCCK  322 (327)
Q Consensus       304 ~~p~~~~~~~l~~~~~~~~  322 (327)
                      |+|+++++++++++++|++
T Consensus       295 ~~p~~~l~~~l~~~~~~~~  313 (314)
T TIGR02197       295 YGPFTTLEEGVKDYVQWLL  313 (314)
T ss_pred             CCCcccHHHHHHHHHHHHh
Confidence            9999999999999999985

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=6.4e-38  Score=275.74  Aligned_cols=300  Identities=21%  Similarity=0.220  Sum_probs=219.8

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEEEE
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGVIH   84 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih   84 (327)
                      +|||||||||||++++++|+++|++|++++|..............    ..+++++.+|+.+++.+.++++  ++|+|||
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~   76 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER----ITRVTFVEGDLRDRELLDRLFEEHKIDAVIH   76 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc----ccceEEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence            589999999999999999999999999887632222222221111    1257788999999999998886  6999999


Q ss_pred             ccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           85 VAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        85 ~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      +|+.....  ..... +.++.|+.++.+++++|.+.+ ++++|++||..+|+  .....+++|+++         ..|.+
T Consensus        77 ~ag~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g--~~~~~~~~e~~~---------~~~~~  143 (328)
T TIGR01179        77 FAGLIAVGESVQDPL-KYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYG--EPSSIPISEDSP---------LGPIN  143 (328)
T ss_pred             CccccCcchhhcCch-hhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcC--CCCCCCccccCC---------CCCCC
Confidence            99865321  22333 778999999999999999887 78999999999885  334456788875         24567


Q ss_pred             hhHhhhHHHHHHHHHHHHH-cCCcEEEEecCceecCCCCCC-------CCchHHHHHHHHhCCc--cc-------ccccc
Q 020334          163 SYVLTKTLTERAALEFAEE-HGLDLVTLIPSFVVGPFICPK-------FAGSVRSTLAMVLGNR--EE-------YSILL  225 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~-~~~~~~i~R~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~--~~-------~~~~~  225 (327)
                      .|+.+|..+|..++.++++ .+++++++||+.+|||.....       ....+..+.....+..  ..       ...+.
T Consensus       144 ~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  223 (328)
T TIGR01179       144 PYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGT  223 (328)
T ss_pred             chHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCc
Confidence            8999999999999999877 699999999999999964321       1223333333332221  11       11112


Q ss_pred             C-CCeeeHHHHHHHHHHhhcCC---CCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHH-
Q 020334          226 N-ISMVHIDDVARAHIFLLEYP---DAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL-  299 (327)
Q Consensus       226 ~-~~~i~v~D~a~~~~~~~~~~---~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-  299 (327)
                      . ++|+|++|++++++.++...   ..+++||+ +++++|++|+++.+++.+|. +.+...............+|++|+ 
T Consensus       224 ~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~  302 (328)
T TIGR01179       224 CVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGV-DFPVELAPRRPGDPASLVADASKIR  302 (328)
T ss_pred             eEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCC-CcceEeCCCCCccccchhcchHHHH
Confidence            2 69999999999999998752   34569997 56789999999999999882 222100111112233456799999 


Q ss_pred             Hhcccccccc-HHHHHHHHHHHHHHc
Q 020334          300 LDICFTYKYG-IDEMFDGAIKCCKER  324 (327)
Q Consensus       300 ~~lg~~p~~~-~~~~l~~~~~~~~~~  324 (327)
                      +.|||+|+++ ++++++++++|++++
T Consensus       303 ~~lg~~p~~~~l~~~~~~~~~~~~~~  328 (328)
T TIGR01179       303 RELGWQPKYTDLEIIIKTAWRWESRN  328 (328)
T ss_pred             HHhCCCCCcchHHHHHHHHHHHHhcC
Confidence            7899999997 999999999999764

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=7.3e-38  Score=266.49  Aligned_cols=248  Identities=31%  Similarity=0.352  Sum_probs=185.5

Q ss_pred             EEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEcc
Q 020334            9 CVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHVA   86 (327)
Q Consensus         9 lVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~a   86 (327)
                      |||||+||||++|+++|+++|  ++|.++++..+...  ...+..    .+..+++.+|++|++++.++++++|+|||+|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~----~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~A   74 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQK----SGVKEYIQGDITDPESLEEALEGVDVVFHTA   74 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhc----ccceeEEEeccccHHHHHHHhcCCceEEEeC
Confidence            699999999999999999999  78999998432221  111111    1233499999999999999999999999999


Q ss_pred             CCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCc--ccCCCCCChhHhhhcCCCchhh
Q 020334           87 APIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDM--LDETFWSDEDYIRKLDIWGKSY  164 (327)
Q Consensus        87 ~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~--~~E~~~~~~~~~~~~~~~~~~Y  164 (327)
                      ++.........++++++|+.|+++++++|++.+ +++|||+||..+++........  .+|+.+.+       ..+.+.|
T Consensus        75 a~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~-------~~~~~~Y  146 (280)
T PF01073_consen   75 APVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKGDPIINGDEDTPYP-------SSPLDPY  146 (280)
T ss_pred             ccccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCCCCcccCCcCCccc-------ccccCch
Confidence            987755544555899999999999999999998 9999999999999742222222  35555421       2356789


Q ss_pred             HhhhHHHHHHHHHHHH---H--cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc-cccccccC-CCeeeHHHHHH
Q 020334          165 VLTKTLTERAALEFAE---E--HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR-EEYSILLN-ISMVHIDDVAR  237 (327)
Q Consensus       165 ~~sK~~~e~~~~~~~~---~--~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~i~v~D~a~  237 (327)
                      +.||.++|+++.++..   +  ..+++++|||+.||||++....+..... .+  .+.. ...+.+.. .+++|++|+|.
T Consensus       147 ~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~-~~--~g~~~~~~g~~~~~~~~vyV~NvA~  223 (280)
T PF01073_consen  147 AESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKM-VR--SGLFLFQIGDGNNLFDFVYVENVAH  223 (280)
T ss_pred             HHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHH-HH--hcccceeecCCCceECcEeHHHHHH
Confidence            9999999999998865   2  2499999999999999876543333221 11  1212 22332222 79999999999


Q ss_pred             HHHHhhcC---C-----CCCceEEEe-ccccC-HHHHHHHHHHhCC
Q 020334          238 AHIFLLEY---P-----DAKGRYICS-SAKLT-IQEMAEFLSAKHP  273 (327)
Q Consensus       238 ~~~~~~~~---~-----~~~~~y~~~-~~~~s-~~e~~~~i~~~~~  273 (327)
                      +++++++.   +     ..|+.|+++ ++++. ++|+.+.+.+.+|
T Consensus       224 ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G  269 (280)
T PF01073_consen  224 AHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALG  269 (280)
T ss_pred             HHHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCC
Confidence            99998653   2     234588875 56777 9999999999998

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=5.2e-38  Score=274.71  Aligned_cols=272  Identities=18%  Similarity=0.152  Sum_probs=204.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      ++|+||||||+||||++++++|+++|  ++|++++| +......+.....    ..+++++.+|++|++.+.++++++|+
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r-~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~l~~~~~~iD~   77 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSR-DELKQWEMQQKFP----APCLRFFIGDVRDKERLTRALRGVDY   77 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcC-ChhHHHHHHHHhC----CCcEEEEEccCCCHHHHHHHHhcCCE
Confidence            36899999999999999999999986  78999998 3322211111111    14688999999999999999999999


Q ss_pred             EEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           82 VIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        82 vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |||+||....  ...++. +.+++|+.++.++++++++.+ +++||++||...+                         .
T Consensus        78 Vih~Ag~~~~~~~~~~~~-~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~~~-------------------------~  130 (324)
T TIGR03589        78 VVHAAALKQVPAAEYNPF-ECIRTNINGAQNVIDAAIDNG-VKRVVALSTDKAA-------------------------N  130 (324)
T ss_pred             EEECcccCCCchhhcCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCCC-------------------------C
Confidence            9999987542  223344 789999999999999999987 8899999995321                         2


Q ss_pred             CchhhHhhhHHHHHHHHHHHH---HcCCcEEEEecCceecCCCCCCCCchHHHHHHHHh-CC-ccccccccC-CCeeeHH
Q 020334          160 WGKSYVLTKTLTERAALEFAE---EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVL-GN-REEYSILLN-ISMVHID  233 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~-~~~i~v~  233 (327)
                      |.++|+.+|..+|.+++.++.   +.|++++++||+++|||+.     ..+..+..... +. ...+..+.+ ++|+|++
T Consensus       131 p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~-----~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~  205 (324)
T TIGR03589       131 PINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG-----SVVPFFKSLKEEGVTELPITDPRMTRFWITLE  205 (324)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC-----CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHH
Confidence            356799999999999987643   4689999999999999863     23444444433 32 234433333 7999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCccccc-ccccccChHHH-HhccccccccHH
Q 020334          234 DVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEG-YKLSALSSKKL-LDICFTYKYGID  311 (327)
Q Consensus       234 D~a~~~~~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~k~-~~lg~~p~~~~~  311 (327)
                      |++++++.++++...+.+|++++..+|+.|+++.+.+..+....+.     +..+ .....+|++|+ +.|||+|+++++
T Consensus       206 D~a~a~~~al~~~~~~~~~~~~~~~~sv~el~~~i~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~lg~~~~~~l~  280 (324)
T TIGR03589       206 QGVNFVLKSLERMLGGEIFVPKIPSMKITDLAEAMAPECPHKIVGI-----RPGEKLHEVMITEDDARHTYELGDYYAIL  280 (324)
T ss_pred             HHHHHHHHHHhhCCCCCEEccCCCcEEHHHHHHHHHhhCCeeEeCC-----CCCchhHhhhcChhhhhhhcCCCCeEEEc
Confidence            9999999999875445577767778999999999998755211111     1111 23355799999 889999999999


Q ss_pred             HHHHHH
Q 020334          312 EMFDGA  317 (327)
Q Consensus       312 ~~l~~~  317 (327)
                      +++.+.
T Consensus       281 ~~~~~~  286 (324)
T TIGR03589       281 PSISFW  286 (324)
T ss_pred             cccccc
Confidence            998643

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=3.3e-37  Score=266.16  Aligned_cols=268  Identities=20%  Similarity=0.176  Sum_probs=203.9

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC--CCEEEE
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG--CAGVIH   84 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vih   84 (327)
                      +|||||||||||++++++|+++|++|++++| .                       .+|+.|++.+.+++++  +|+|||
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r-~-----------------------~~d~~~~~~~~~~~~~~~~d~vi~   56 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTS-S-----------------------QLDLTDPEALERLLRAIRPDAVVN   56 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCC-c-----------------------ccCCCCHHHHHHHHHhCCCCEEEE
Confidence            5899999999999999999999999999988 2                       2799999999998885  599999


Q ss_pred             ccCCCCCC-CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchh
Q 020334           85 VAAPIDID-GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS  163 (327)
Q Consensus        85 ~a~~~~~~-~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  163 (327)
                      ||+..... ........++.|+.++.++++++++.+  .+||++||.++|+  .....+++|+++         ..|.++
T Consensus        57 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~Ss~~vy~--~~~~~~~~E~~~---------~~~~~~  123 (287)
T TIGR01214        57 TAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG--ARLVHISTDYVFD--GEGKRPYREDDA---------TNPLNV  123 (287)
T ss_pred             CCccccccccccCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEeeeeeec--CCCCCCCCCCCC---------CCCcch
Confidence            99875432 112233788999999999999999877  4899999999995  334567888875         245678


Q ss_pred             hHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHh-CCccccccccCCCeeeHHHHHHHHHHh
Q 020334          164 YVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVL-GNREEYSILLNISMVHIDDVARAHIFL  242 (327)
Q Consensus       164 Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~  242 (327)
                      |+.+|..+|+.++.+    +.+++++||+.+|||+...   ..+..++.... +.+........++++|++|+|+++..+
T Consensus       124 Y~~~K~~~E~~~~~~----~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~  196 (287)
T TIGR01214       124 YGQSKLAGEQAIRAA----GPNALIVRTSWLYGGGGGR---NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAAL  196 (287)
T ss_pred             hhHHHHHHHHHHHHh----CCCeEEEEeeecccCCCCC---CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHH
Confidence            999999999999764    6899999999999997432   22333333333 333322222347999999999999999


Q ss_pred             hcCC-CCCceEEE-eccccCHHHHHHHHHHhCCCCCCCC----CCC-----Ccc-cccccccccChHHH-Hhcccccccc
Q 020334          243 LEYP-DAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPN----VDS-----LSE-IEGYKLSALSSKKL-LDICFTYKYG  309 (327)
Q Consensus       243 ~~~~-~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~----~~~-----~~~-~~~~~~~~~d~~k~-~~lg~~p~~~  309 (327)
                      +..+ ..+++||+ +++.+|+.|+++.+++.++......    ...     ... ........+|++|+ +.|||++. +
T Consensus       197 ~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~~~-~  275 (287)
T TIGR01214       197 LQRLARARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGTPLP-H  275 (287)
T ss_pred             HhhccCCCCeEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCCCCc-c
Confidence            9876 45789996 5678999999999999988322110    000     000 12234567999999 77999665 9


Q ss_pred             HHHHHHHHHH
Q 020334          310 IDEMFDGAIK  319 (327)
Q Consensus       310 ~~~~l~~~~~  319 (327)
                      ++++|.++++
T Consensus       276 ~~~~l~~~~~  285 (287)
T TIGR01214       276 WREALRAYLQ  285 (287)
T ss_pred             HHHHHHHHHh
Confidence            9999999876

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.2e-36  Score=251.35  Aligned_cols=267  Identities=22%  Similarity=0.182  Sum_probs=213.5

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEEEE
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGVIH   84 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih   84 (327)
                      +|||||++|++|++|++.|. .+++|++++| .                  .     .|++|++.+.++++  ++|+|||
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~-~------------------~-----~Ditd~~~v~~~i~~~~PDvVIn   56 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEFEVIATDR-A------------------E-----LDITDPDAVLEVIRETRPDVVIN   56 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCceEEeccC-c------------------c-----ccccChHHHHHHHHhhCCCEEEE
Confidence            39999999999999999998 7799999988 2                  1     89999999999997  6899999


Q ss_pred             ccCCCCCC-CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchh
Q 020334           85 VAAPIDID-GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS  163 (327)
Q Consensus        85 ~a~~~~~~-~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  163 (327)
                      +|+.+..+ .+...+..+.+|..++.+++++|++.|  .++||+||.+||.  .....++.|+++         ..|.+.
T Consensus        57 ~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFD--G~~~~~Y~E~D~---------~~P~nv  123 (281)
T COG1091          57 AAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHISTDYVFD--GEKGGPYKETDT---------PNPLNV  123 (281)
T ss_pred             CccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEec--CCCCCCCCCCCC---------CCChhh
Confidence            99987743 333334899999999999999999998  7899999999994  455678999987         478899


Q ss_pred             hHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC-CCeeeHHHHHHHHHHh
Q 020334          164 YVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN-ISMVHIDDVARAHIFL  242 (327)
Q Consensus       164 Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~~~~~~  242 (327)
                      ||.||+++|..++.+    +-+..|+|.+++||...    ..++..+++....+........+ .+.+++.|+|+++..+
T Consensus       124 YG~sKl~GE~~v~~~----~~~~~I~Rtswv~g~~g----~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~l  195 (281)
T COG1091         124 YGRSKLAGEEAVRAA----GPRHLILRTSWVYGEYG----NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILEL  195 (281)
T ss_pred             hhHHHHHHHHHHHHh----CCCEEEEEeeeeecCCC----CCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHH
Confidence            999999999999875    46689999999999864    23444555554444433333334 6899999999999999


Q ss_pred             hcCCCCCceEEEec-cccCHHHHHHHHHHhCCC---CCCCC-CCCCcc-cccccccccChHHH-HhccccccccHHHHHH
Q 020334          243 LEYPDAKGRYICSS-AKLTIQEMAEFLSAKHPE---YPIPN-VDSLSE-IEGYKLSALSSKKL-LDICFTYKYGIDEMFD  315 (327)
Q Consensus       243 ~~~~~~~~~y~~~~-~~~s~~e~~~~i~~~~~~---~~~~~-~~~~~~-~~~~~~~~~d~~k~-~~lg~~p~~~~~~~l~  315 (327)
                      +.....+++|++++ +.+||.|+++.+.+..+.   ..-+. ...++. ...+.+..+|++|+ +.+|+.|+ +|+++++
T Consensus       196 l~~~~~~~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~~g~~~~-~w~~~l~  274 (281)
T COG1091         196 LEKEKEGGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAFGLSLP-EWREALK  274 (281)
T ss_pred             HhccccCcEEEEeCCCcccHHHHHHHHHHHhCCCccccccccccccCccCCCCcccccchHHHHHHhCCCCc-cHHHHHH
Confidence            99988888999754 557999999999998761   11111 111122 25567788999999 88899999 9999999


Q ss_pred             HHHHH
Q 020334          316 GAIKC  320 (327)
Q Consensus       316 ~~~~~  320 (327)
                      ++++.
T Consensus       275 ~~~~~  279 (281)
T COG1091         275 ALLDE  279 (281)
T ss_pred             HHHhh
Confidence            99874

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=6.4e-38  Score=268.52  Aligned_cols=269  Identities=23%  Similarity=0.198  Sum_probs=190.8

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi   83 (327)
                      ||||||||+|+||++|+++|.++|++|+++.| .                       ..|+.|.+.+.+++.  ++|+||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r-~-----------------------~~dl~d~~~~~~~~~~~~pd~Vi   56 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSR-S-----------------------DLDLTDPEAVAKLLEAFKPDVVI   56 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEEST-T-----------------------CS-TTSHHHHHHHHHHH--SEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCc-h-----------------------hcCCCCHHHHHHHHHHhCCCeEe
Confidence            68999999999999999999999999999988 2                       388999999998886  689999


Q ss_pred             EccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           84 HVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        84 h~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      ||||....  ...++. ..+.+|+.++.+|+++|++.+  .++||+||..||.  .....+++|+++         ..|.
T Consensus        57 n~aa~~~~~~ce~~p~-~a~~iN~~~~~~la~~~~~~~--~~li~~STd~VFd--G~~~~~y~E~d~---------~~P~  122 (286)
T PF04321_consen   57 NCAAYTNVDACEKNPE-EAYAINVDATKNLAEACKERG--ARLIHISTDYVFD--GDKGGPYTEDDP---------PNPL  122 (286)
T ss_dssp             E------HHHHHHSHH-HHHHHHTHHHHHHHHHHHHCT---EEEEEEEGGGS---SSTSSSB-TTS-------------S
T ss_pred             ccceeecHHhhhhChh-hhHHHhhHHHHHHHHHHHHcC--CcEEEeeccEEEc--CCcccccccCCC---------CCCC
Confidence            99997652  233444 889999999999999999987  6999999999995  345667899986         4678


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc-cccccccCCCeeeHHHHHHHHH
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR-EEYSILLNISMVHIDDVARAHI  240 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~D~a~~~~  240 (327)
                      +.||.+|.++|+.++...    -+..|+|++.+||+..    ..++.++...+..++ ........++.+|++|+|+++.
T Consensus       123 ~~YG~~K~~~E~~v~~~~----~~~~IlR~~~~~g~~~----~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~  194 (286)
T PF04321_consen  123 NVYGRSKLEGEQAVRAAC----PNALILRTSWVYGPSG----RNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVIL  194 (286)
T ss_dssp             SHHHHHHHHHHHHHHHH-----SSEEEEEE-SEESSSS----SSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhc----CCEEEEecceecccCC----CchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHH
Confidence            999999999999998743    3789999999999932    345556655554444 4444433479999999999999


Q ss_pred             HhhcCCCC----CceEEE-eccccCHHHHHHHHHHhCCCCC-----CCCCCCCcccccccccccChHHH-Hhcccccccc
Q 020334          241 FLLEYPDA----KGRYIC-SSAKLTIQEMAEFLSAKHPEYP-----IPNVDSLSEIEGYKLSALSSKKL-LDICFTYKYG  309 (327)
Q Consensus       241 ~~~~~~~~----~~~y~~-~~~~~s~~e~~~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p~~~  309 (327)
                      .++++...    .|+||+ +++.+|..|+++.+++.++...     ++..........+.+..+|++|+ +.+|.+++ +
T Consensus       195 ~l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~~~~L~~~kl~~~~g~~~~-~  273 (286)
T PF04321_consen  195 ELIEKNLSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPRNTSLDCRKLKNLLGIKPP-P  273 (286)
T ss_dssp             HHHHHHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-SBE-B--HHHHHCTTS----B
T ss_pred             HHHHhcccccccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCCcccccHHHHHHccCCCCc-C
Confidence            99987543    589995 6678999999999999887211     11111111124567889999999 77799999 9


Q ss_pred             HHHHHHHHHHHH
Q 020334          310 IDEMFDGAIKCC  321 (327)
Q Consensus       310 ~~~~l~~~~~~~  321 (327)
                      |+++|+++++.+
T Consensus       274 ~~~~l~~~~~~~  285 (286)
T PF04321_consen  274 WREGLEELVKQY  285 (286)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            999999999865

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=1.1e-35  Score=265.70  Aligned_cols=281  Identities=19%  Similarity=0.153  Sum_probs=199.6

Q ss_pred             CCCCeEEEe----CCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhh-----hhhCCCCCCCCeEEEeCCCCChhHHH
Q 020334            3 EQKGKVCVT----GGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLS-----FLTNLPGASERLQIFNADLNDPESFD   73 (327)
Q Consensus         3 ~~~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~d~~~~~   73 (327)
                      .++++||||    |||||||++|+++|+++||+|++++|+. .......     .....  ...+++++.+|+.|   +.
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~l--~~~~v~~v~~D~~d---~~  123 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGK-EPSQKMKKEPFSRFSEL--SSAGVKTVWGDPAD---VK  123 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCC-cchhhhccCchhhhhHh--hhcCceEEEecHHH---HH
Confidence            356899999    9999999999999999999999999943 2211110     00000  01358899999987   33


Q ss_pred             HHh--cCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCCh
Q 020334           74 AAI--AGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDE  151 (327)
Q Consensus        74 ~~~--~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~  151 (327)
                      +++  .++|+|||+++..               ..++.+++++|++.+ +++|||+||.++|+  .....+..|+++.  
T Consensus       124 ~~~~~~~~d~Vi~~~~~~---------------~~~~~~ll~aa~~~g-vkr~V~~SS~~vyg--~~~~~p~~E~~~~--  183 (378)
T PLN00016        124 SKVAGAGFDVVYDNNGKD---------------LDEVEPVADWAKSPG-LKQFLFCSSAGVYK--KSDEPPHVEGDAV--  183 (378)
T ss_pred             hhhccCCccEEEeCCCCC---------------HHHHHHHHHHHHHcC-CCEEEEEccHhhcC--CCCCCCCCCCCcC--
Confidence            444  4799999997631               235788999999988 99999999999996  3334456666531  


Q ss_pred             hHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHH-HhCCcccccccc-C-CC
Q 020334          152 DYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAM-VLGNREEYSILL-N-IS  228 (327)
Q Consensus       152 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~-~~  228 (327)
                             .|   +. +|..+|.+++    +.+++++++||+.+|||+....   ....+... ..+.+..+...+ + ++
T Consensus       184 -------~p---~~-sK~~~E~~l~----~~~l~~~ilRp~~vyG~~~~~~---~~~~~~~~~~~~~~i~~~g~g~~~~~  245 (378)
T PLN00016        184 -------KP---KA-GHLEVEAYLQ----KLGVNWTSFRPQYIYGPGNNKD---CEEWFFDRLVRGRPVPIPGSGIQLTQ  245 (378)
T ss_pred             -------CC---cc-hHHHHHHHHH----HcCCCeEEEeceeEECCCCCCc---hHHHHHHHHHcCCceeecCCCCeeec
Confidence                   22   22 8999998774    3689999999999999975432   22223332 334444443323 2 79


Q ss_pred             eeeHHHHHHHHHHhhcCCC-CCceEEEe-ccccCHHHHHHHHHHhCCCC-CCC-CCCCCccc-------ccccccccChH
Q 020334          229 MVHIDDVARAHIFLLEYPD-AKGRYICS-SAKLTIQEMAEFLSAKHPEY-PIP-NVDSLSEI-------EGYKLSALSSK  297 (327)
Q Consensus       229 ~i~v~D~a~~~~~~~~~~~-~~~~y~~~-~~~~s~~e~~~~i~~~~~~~-~~~-~~~~~~~~-------~~~~~~~~d~~  297 (327)
                      |+|++|+|++++.+++++. .+++||++ ++.+|+.|+++.+.+.+|.. .+. ........       ........|++
T Consensus       246 ~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~  325 (378)
T PLN00016        246 LGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASPR  325 (378)
T ss_pred             eecHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCccccCccccccccccccccccCHH
Confidence            9999999999999998864 45689975 56799999999999988831 111 10000010       11233457999


Q ss_pred             HH-HhccccccccHHHHHHHHHHHHHHcCCC
Q 020334          298 KL-LDICFTYKYGIDEMFDGAIKCCKERGYL  327 (327)
Q Consensus       298 k~-~~lg~~p~~~~~~~l~~~~~~~~~~~~~  327 (327)
                      |+ +.|||+|+++++|+|.++++||+..|.+
T Consensus       326 ka~~~LGw~p~~~l~egl~~~~~~~~~~~~~  356 (378)
T PLN00016        326 KAKEELGWTPKFDLVEDLKDRYELYFGRGRD  356 (378)
T ss_pred             HHHHhcCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence            99 8899999999999999999999988753

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=2e-35  Score=247.79  Aligned_cols=227  Identities=28%  Similarity=0.320  Sum_probs=182.4

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC--CCEEEEc
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG--CAGVIHV   85 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vih~   85 (327)
                      |||||||||||++++++|+++|++|+.+.|+..........        .+++++.+|+.|.+.+.++++.  +|+|||+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~--------~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~   72 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK--------LNVEFVIGDLTDKEQLEKLLEKANIDVVIHL   72 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH--------TTEEEEESETTSHHHHHHHHHHHTESEEEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc--------ceEEEEEeeccccccccccccccCceEEEEe
Confidence            79999999999999999999999999999944332221111        2789999999999999999984  5999999


Q ss_pred             cCCCC--CCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchh
Q 020334           86 AAPID--IDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS  163 (327)
Q Consensus        86 a~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  163 (327)
                      |+...  .+.... ...++.|+.++.++++++++.+ +++||++||+.+|+  .....+++|+++.         .|.++
T Consensus        73 a~~~~~~~~~~~~-~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~--~~~~~~~~e~~~~---------~~~~~  139 (236)
T PF01370_consen   73 AAFSSNPESFEDP-EEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYG--DPDGEPIDEDSPI---------NPLSP  139 (236)
T ss_dssp             BSSSSHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGT--SSSSSSBETTSGC---------CHSSH
T ss_pred             ecccccccccccc-cccccccccccccccccccccc-cccccccccccccc--ccccccccccccc---------ccccc
Confidence            99753  112233 3889999999999999999998 78999999999996  3466788888852         55778


Q ss_pred             hHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCC-CCCCCCchHHHHHHHH-hCCcccccccc-C-CCeeeHHHHHHHH
Q 020334          164 YVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPF-ICPKFAGSVRSTLAMV-LGNREEYSILL-N-ISMVHIDDVARAH  239 (327)
Q Consensus       164 Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~i~v~D~a~~~  239 (327)
                      |+.+|..+|++++.+.++++++++++||+.+|||. ........+..++..+ .+++..+...+ + ++|+|++|+|+++
T Consensus       140 Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  219 (236)
T PF01370_consen  140 YGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAI  219 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHH
Confidence            99999999999999998889999999999999998 2222345555555544 45544444333 3 8999999999999


Q ss_pred             HHhhcCCC-CCceEEEe
Q 020334          240 IFLLEYPD-AKGRYICS  255 (327)
Q Consensus       240 ~~~~~~~~-~~~~y~~~  255 (327)
                      +.+++++. .+++||++
T Consensus       220 ~~~~~~~~~~~~~yNig  236 (236)
T PF01370_consen  220 VAALENPKAAGGIYNIG  236 (236)
T ss_dssp             HHHHHHSCTTTEEEEES
T ss_pred             HHHHhCCCCCCCEEEeC
Confidence            99999988 78899974

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=3e-35  Score=228.80  Aligned_cols=287  Identities=19%  Similarity=0.230  Sum_probs=218.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d   80 (327)
                      +++|||||++|.+|+++.+.+..+|.  +=.++.-                       .-.+|+++.++.+++|.  ++.
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~-----------------------skd~DLt~~a~t~~lF~~ekPt   57 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG-----------------------SKDADLTNLADTRALFESEKPT   57 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEec-----------------------cccccccchHHHHHHHhccCCc
Confidence            47899999999999999999998875  2222211                       11289999999999997  689


Q ss_pred             EEEEccCCCC---CCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhc
Q 020334           81 GVIHVAAPID---IDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKL  157 (327)
Q Consensus        81 ~vih~a~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~  157 (327)
                      +|||+|+..+   .....+. +++..|+....|++..|-+.+ ++++++..|+++|  .+....|++|+....    .|+
T Consensus        58 hVIhlAAmVGGlf~N~~ynl-dF~r~Nl~indNVlhsa~e~g-v~K~vsclStCIf--Pdkt~yPIdEtmvh~----gpp  129 (315)
T KOG1431|consen   58 HVIHLAAMVGGLFHNNTYNL-DFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCIF--PDKTSYPIDETMVHN----GPP  129 (315)
T ss_pred             eeeehHhhhcchhhcCCCch-HHHhhcceechhHHHHHHHhc-hhhhhhhcceeec--CCCCCCCCCHHHhcc----CCC
Confidence            9999998766   3344555 999999999999999999999 9999999999999  566778899987532    222


Q ss_pred             CCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC--CCchHHHHH----HHHhCCc---cccccccC-C
Q 020334          158 DIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK--FAGSVRSTL----AMVLGNR---EEYSILLN-I  227 (327)
Q Consensus       158 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~----~~~~~~~---~~~~~~~~-~  227 (327)
                      .+..-.|+.+|+++...-+.|..++|..++.+-|.++|||.++..  ....++.++    .....+.   ..++.+.. |
T Consensus       130 hpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlR  209 (315)
T KOG1431|consen  130 HPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLR  209 (315)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHH
Confidence            233446999999999888999999999999999999999987653  233444333    2222222   23344444 8


Q ss_pred             CeeeHHHHHHHHHHhhcCCCCCc-eEEEecc--ccCHHHHHHHHHHhCC-CCCCCCCCCCcccccccccccChHHHHhcc
Q 020334          228 SMVHIDDVARAHIFLLEYPDAKG-RYICSSA--KLTIQEMAEFLSAKHP-EYPIPNVDSLSEIEGYKLSALSSKKLLDIC  303 (327)
Q Consensus       228 ~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~--~~s~~e~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg  303 (327)
                      .|+|++|+|++++++++.=..-. +....++  .+|++|+++++.++.+ .-.+..  +............|++|+..|+
T Consensus       210 qFiys~DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~--DttK~DGq~kKtasnsKL~sl~  287 (315)
T KOG1431|consen  210 QFIYSDDLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVW--DTTKSDGQFKKTASNSKLRSLL  287 (315)
T ss_pred             HHhhHhHHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEe--eccCCCCCcccccchHHHHHhC
Confidence            99999999999999998743333 4444565  7999999999999887 212222  2222345566789999999999


Q ss_pred             cccccc-HHHHHHHHHHHHHHc
Q 020334          304 FTYKYG-IDEMFDGAIKCCKER  324 (327)
Q Consensus       304 ~~p~~~-~~~~l~~~~~~~~~~  324 (327)
                      |.|+++ |+++|.++++||.++
T Consensus       288 pd~~ft~l~~ai~~t~~Wy~~N  309 (315)
T KOG1431|consen  288 PDFKFTPLEQAISETVQWYLDN  309 (315)
T ss_pred             CCcccChHHHHHHHHHHHHHHh
Confidence            999995 999999999999864

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.3e-34  Score=232.97  Aligned_cols=306  Identities=17%  Similarity=0.163  Sum_probs=236.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC-CcchhhhhhCCCCC-CCCeEEEeCCCCChhHHHHHhc--CC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE-HKKDLSFLTNLPGA-SERLQIFNADLNDPESFDAAIA--GC   79 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~--~~   79 (327)
                      |+|+.||||-||+-|++|++.|+++||+|+++.|+... +...+ ++...+.. ..+++++.+|++|...+.++++  ++
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~P   79 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQP   79 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccc-eeccccccCCceeEEEeccccchHHHHHHHHhcCc
Confidence            46899999999999999999999999999999996432 33322 33322221 3458899999999999999887  68


Q ss_pred             CEEEEccCCCC--CCCCchHHHHHHHHHhHHHHHHHHHHhcCC-ccEEEEeccceeeeecCCCCCcccCCCCCChhHhhh
Q 020334           80 AGVIHVAAPID--IDGKETEEVMTQRAVNGTIGILKSCLKSGT-VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRK  156 (327)
Q Consensus        80 d~vih~a~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~  156 (327)
                      |-|+|+||...  .+.+.+. .+.+++..|+.+|+++++..+. ..+|.+.||+..||  .....|.+|++|.       
T Consensus        80 dEIYNLaAQS~V~vSFe~P~-~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG--~v~~~pq~E~TPF-------  149 (345)
T COG1089          80 DEIYNLAAQSHVGVSFEQPE-YTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYG--LVQEIPQKETTPF-------  149 (345)
T ss_pred             hhheeccccccccccccCcc-eeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhc--CcccCccccCCCC-------
Confidence            99999998654  5666776 8889999999999999998873 46999999999995  5677889999984       


Q ss_pred             cCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC-CchHHHH-HHHHhCCcccccccc---CCCeee
Q 020334          157 LDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKF-AGSVRST-LAMVLGNREEYSILL---NISMVH  231 (327)
Q Consensus       157 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~---~~~~i~  231 (327)
                        .|.+||+.+|.-+--+...|.+.+|+-.|.=.+++--+|..+..+ .+-+... .+...|....+..++   .|||.|
T Consensus       150 --yPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~  227 (345)
T COG1089         150 --YPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGH  227 (345)
T ss_pred             --CCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccc
Confidence              789999999999999999999999999998888887788766533 2222222 333344444444333   399999


Q ss_pred             HHHHHHHHHHhhcCCCCCceEE-EeccccCHHHHHHHHHHhCC-CCC-------------------CCCCCCCccccccc
Q 020334          232 IDDVARAHIFLLEYPDAKGRYI-CSSAKLTIQEMAEFLSAKHP-EYP-------------------IPNVDSLSEIEGYK  290 (327)
Q Consensus       232 v~D~a~~~~~~~~~~~~~~~y~-~~~~~~s~~e~~~~i~~~~~-~~~-------------------~~~~~~~~~~~~~~  290 (327)
                      +.|.++++.+.++++. ...|+ .+|+..|++|++++..+..| .+.                   +.....+-+..+..
T Consensus       228 A~DYVe~mwlmLQq~~-PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~  306 (345)
T COG1089         228 AKDYVEAMWLMLQQEE-PDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVD  306 (345)
T ss_pred             hHHHHHHHHHHHccCC-CCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhh
Confidence            9999999999999976 45675 68999999999999998777 111                   11100111112334


Q ss_pred             ccccChHHH-HhccccccccHHHHHHHHHHHHHH
Q 020334          291 LSALSSKKL-LDICFTYKYGIDEMFDGAIKCCKE  323 (327)
Q Consensus       291 ~~~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~  323 (327)
                      -...|++|+ +.|||+|+++++|.+++|+++-.+
T Consensus       307 ~Llgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl~  340 (345)
T COG1089         307 LLLGDPTKAKEKLGWRPEVSLEELVREMVEADLE  340 (345)
T ss_pred             hhcCCHHHHHHHcCCccccCHHHHHHHHHHHHHH
Confidence            567799999 899999999999999999997654

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=4.4e-34  Score=244.40  Aligned_cols=302  Identities=23%  Similarity=0.261  Sum_probs=216.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      +.+++||||+||+|.||+++|.+++  .+|++++. .+............  ....++++.+|++|...+...++++ .|
T Consensus         4 ~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~-~~~~~~~~~e~~~~--~~~~v~~~~~D~~~~~~i~~a~~~~-~V   79 (361)
T KOG1430|consen    4 KLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDK-TPTQSNLPAELTGF--RSGRVTVILGDLLDANSISNAFQGA-VV   79 (361)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhcccccEEEEecc-Cccccccchhhhcc--cCCceeEEecchhhhhhhhhhccCc-eE
Confidence            6789999999999999999999997  89999998 44321111111110  1368999999999999999999999 88


Q ss_pred             EEccCCCC--CCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           83 IHVAAPID--IDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        83 ih~a~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      +|||+...  ....+.. ..+++||.||.+++++|++.+ ++++||+||..|+..+.. ...-+|+.+..       ..+
T Consensus        80 vh~aa~~~~~~~~~~~~-~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf~g~~-~~n~~E~~p~p-------~~~  149 (361)
T KOG1430|consen   80 VHCAASPVPDFVENDRD-LAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVFGGEP-IINGDESLPYP-------LKH  149 (361)
T ss_pred             EEeccccCccccccchh-hheeecchhHHHHHHHHHHhC-CCEEEEecCceEEeCCee-cccCCCCCCCc-------ccc
Confidence            88886533  2233344 889999999999999999999 999999999999874433 34456665432       223


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc--cccC-CCeeeHHHHHH
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS--ILLN-ISMVHIDDVAR  237 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~i~v~D~a~  237 (327)
                      ..+|+.||..+|+++++.+...++.++++||..||||++....+.    ....+......+.  .... .++++++.++.
T Consensus       150 ~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~----i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~  225 (361)
T KOG1430|consen  150 IDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPK----IVEALKNGGFLFKIGDGENLNDFTYGENVAW  225 (361)
T ss_pred             ccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHH----HHHHHHccCceEEeeccccccceEEechhHH
Confidence            458999999999999998865679999999999999997653333    2233333332222  2222 58999999998


Q ss_pred             HHHHhhcC-----CCC-CceEEEe-ccccCHHHHHHHHHHhCCC-CC----CCCCC----------------CCcc----
Q 020334          238 AHIFLLEY-----PDA-KGRYICS-SAKLTIQEMAEFLSAKHPE-YP----IPNVD----------------SLSE----  285 (327)
Q Consensus       238 ~~~~~~~~-----~~~-~~~y~~~-~~~~s~~e~~~~i~~~~~~-~~----~~~~~----------------~~~~----  285 (327)
                      +.+.+...     +.. |..|+++ +.++...++...+.+.+|. .+    +|.+.                +..+    
T Consensus       226 ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~  305 (361)
T KOG1430|consen  226 AHILAARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTR  305 (361)
T ss_pred             HHHHHHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcCh
Confidence            88877542     223 4477764 5677777777788887772 11    11110                0011    


Q ss_pred             c---ccccccccChHHH-HhccccccccHHHHHHHHHHHHHHc
Q 020334          286 I---EGYKLSALSSKKL-LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       286 ~---~~~~~~~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      .   .......++..|+ ++|||.|..++++++.+++.|....
T Consensus       306 ~~v~~~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~  348 (361)
T KOG1430|consen  306 FRVALLGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASE  348 (361)
T ss_pred             hheeeeccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhh
Confidence            1   1113567899999 9999999999999999999987643

>PRK05865 hypothetical protein; Provisional

Probab=100.00  E-value=8.7e-34  Score=268.58  Aligned_cols=249  Identities=22%  Similarity=0.295  Sum_probs=187.2

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      |+|+|||||||||++++++|+++|++|++++|+.+..   .         ..+++++.+|+.|.+.+.++++++|+||||
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~---------~~~v~~v~gDL~D~~~l~~al~~vD~VVHl   68 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---W---------PSSADFIAADIRDATAVESAMTGADVVAHC   68 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---c---------ccCceEEEeeCCCHHHHHHHHhCCCEEEEC
Confidence            4799999999999999999999999999999942211   0         135789999999999999999999999999


Q ss_pred             cCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhH
Q 020334           86 AAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYV  165 (327)
Q Consensus        86 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~  165 (327)
                      |+...        ..+++|+.++.+++++|++.+ +++|||+||..                                  
T Consensus        69 Aa~~~--------~~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~----------------------------------  105 (854)
T PRK05865         69 AWVRG--------RNDHINIDGTANVLKAMAETG-TGRIVFTSSGH----------------------------------  105 (854)
T ss_pred             CCccc--------chHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH----------------------------------
Confidence            98532        246889999999999999988 88999999831                                  


Q ss_pred             hhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc--C-CCeeeHHHHHHHHHHh
Q 020334          166 LTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL--N-ISMVHIDDVARAHIFL  242 (327)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~i~v~D~a~~~~~~  242 (327)
                        |..+|+++.    +++++++++||+++|||+..    .++..    ..... .+..+.  + ++|+|++|+|+++..+
T Consensus       106 --K~aaE~ll~----~~gl~~vILRp~~VYGP~~~----~~i~~----ll~~~-v~~~G~~~~~~dfIhVdDVA~Ai~~a  170 (854)
T PRK05865        106 --QPRVEQMLA----DCGLEWVAVRCALIFGRNVD----NWVQR----LFALP-VLPAGYADRVVQVVHSDDAQRLLVRA  170 (854)
T ss_pred             --HHHHHHHHH----HcCCCEEEEEeceEeCCChH----HHHHH----HhcCc-eeccCCCCceEeeeeHHHHHHHHHHH
Confidence              677787664    36899999999999999621    12211    11111 122221  2 5899999999999999


Q ss_pred             hcCCC-CCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCc---cc-ccccccccChHHH-HhccccccccHHHHHH
Q 020334          243 LEYPD-AKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLS---EI-EGYKLSALSSKKL-LDICFTYKYGIDEMFD  315 (327)
Q Consensus       243 ~~~~~-~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~---~~-~~~~~~~~d~~k~-~~lg~~p~~~~~~~l~  315 (327)
                      +++.. .+++||+ +++.+|++|+++.+.+.......+......   .. .......+|++|+ +.|||+|+++++++|+
T Consensus       171 L~~~~~~ggvyNIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~  250 (854)
T PRK05865        171 LLDTVIDSGPVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQPAWNAEECLE  250 (854)
T ss_pred             HhCCCcCCCeEEEECCCcccHHHHHHHHhhhhccCCchhhhhccchhhhhcccCCccCCHHHHHHHhCCCCCCCHHHHHH
Confidence            86543 4679996 567899999999998753211111100111   11 1112446899999 8899999999999999


Q ss_pred             HHHHHHHHc
Q 020334          316 GAIKCCKER  324 (327)
Q Consensus       316 ~~~~~~~~~  324 (327)
                      ++++||+.+
T Consensus       251 dti~~~r~r  259 (854)
T PRK05865        251 DFTLAVRGR  259 (854)
T ss_pred             HHHHHHHhh
Confidence            999999863

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=100.00  E-value=1.9e-33  Score=243.29  Aligned_cols=275  Identities=24%  Similarity=0.279  Sum_probs=186.1

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEccC
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHVAA   87 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~a~   87 (327)
                      |||||||||||++++++|+++|++|++++|+ +........        ..+    .|+.. ..+.+.+.++|+|||||+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~--------~~~----~~~~~-~~~~~~~~~~D~Vvh~a~   66 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRS-PPAGANTKW--------EGY----KPWAP-LAESEALEGADAVINLAG   66 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCC-CCCCCcccc--------eee----ecccc-cchhhhcCCCCEEEECCC
Confidence            6999999999999999999999999999994 333221110        011    12222 344556778999999998


Q ss_pred             CCCCC---CCchHHHHHHHHHhHHHHHHHHHHhcCCc--cEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           88 PIDID---GKETEEVMTQRAVNGTIGILKSCLKSGTV--KRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        88 ~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~~~~~~--~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      .....   .......+++.|+.++.++++++++.+ +  ..|++.||..+|+  .....+++|+++.         .+.+
T Consensus        67 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~~yg--~~~~~~~~E~~~~---------~~~~  134 (292)
T TIGR01777        67 EPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVGYYG--TSEDRVFTEEDSP---------AGDD  134 (292)
T ss_pred             CCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEEEeC--CCCCCCcCcccCC---------CCCC
Confidence            64321   112233678899999999999999987 4  3566677767775  3445678888731         2334


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHh-CCccccccccC-CCeeeHHHHHHHHH
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVL-GNREEYSILLN-ISMVHIDDVARAHI  240 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~i~v~D~a~~~~  240 (327)
                      .|+..+...|..+..+ ++.+++++++||+.+|||...     ....+..... .....++.+.. ++|+|++|+|+++.
T Consensus       135 ~~~~~~~~~e~~~~~~-~~~~~~~~ilR~~~v~G~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~  208 (292)
T TIGR01777       135 FLAELCRDWEEAAQAA-EDLGTRVVLLRTGIVLGPKGG-----ALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLIL  208 (292)
T ss_pred             hHHHHHHHHHHHhhhc-hhcCCceEEEeeeeEECCCcc-----hhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHH
Confidence            5666666677766544 346899999999999999632     1111111111 11112222222 79999999999999


Q ss_pred             HhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCC---CCCCCCCC---Cccc--ccccccccChHHHHhccccccc-cH
Q 020334          241 FLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPE---YPIPNVDS---LSEI--EGYKLSALSSKKLLDICFTYKY-GI  310 (327)
Q Consensus       241 ~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~---~~~~~~~~---~~~~--~~~~~~~~d~~k~~~lg~~p~~-~~  310 (327)
                      .+++++...++||+ +++++|+.|+++.+++.++.   ..+|.+..   ....  .-..+.+++++|++++||+|++ ++
T Consensus       209 ~~l~~~~~~g~~~~~~~~~~s~~di~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  288 (292)
T TIGR01777       209 FALENASISGPVNATAPEPVRNKEFAKALARALHRPAFFPVPAFVLRALLGEMADLLLKGQRVLPEKLLEAGFQFQYPDL  288 (292)
T ss_pred             HHhcCcccCCceEecCCCccCHHHHHHHHHHHhCCCCcCcCCHHHHHHHhchhhHHHhCCcccccHHHHhcCCeeeCcCh
Confidence            99988767789996 56789999999999998872   11222100   0000  1124567889999889999999 58


Q ss_pred             HHHH
Q 020334          311 DEMF  314 (327)
Q Consensus       311 ~~~l  314 (327)
                      +|++
T Consensus       289 ~~~~  292 (292)
T TIGR01777       289 DEAL  292 (292)
T ss_pred             hhcC
Confidence            8864

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02778 3,5-epimerase/4-reductase

Probab=100.00  E-value=3.4e-32  Score=234.86  Aligned_cols=266  Identities=15%  Similarity=0.134  Sum_probs=186.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~   81 (327)
                      +.|+||||||+||||++|+++|+++|++|+...                           +|+.|.+.+...++  ++|+
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~---------------------------~~~~~~~~v~~~l~~~~~D~   60 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS---------------------------GRLENRASLEADIDAVKPTH   60 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec---------------------------CccCCHHHHHHHHHhcCCCE
Confidence            457899999999999999999999999986432                           23445555665555  6899


Q ss_pred             EEEccCCCCC-----CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCC----CCcccCCCCCChh
Q 020334           82 VIHVAAPIDI-----DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKD----VDMLDETFWSDED  152 (327)
Q Consensus        82 vih~a~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~----~~~~~E~~~~~~~  152 (327)
                      ||||||....     ...++. +++++|+.++.+|+++|++.+ ++ ++++||.++|++....    ..+++|+++.   
T Consensus        61 ViH~Aa~~~~~~~~~~~~~p~-~~~~~Nv~gt~~ll~aa~~~g-v~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p---  134 (298)
T PLN02778         61 VFNAAGVTGRPNVDWCESHKV-ETIRANVVGTLTLADVCRERG-LV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTP---  134 (298)
T ss_pred             EEECCcccCCCCchhhhhCHH-HHHHHHHHHHHHHHHHHHHhC-CC-EEEEecceEeCCCCCCCcccCCCCCcCCCC---
Confidence            9999997642     123444 889999999999999999987 65 6777888888643211    2347776641   


Q ss_pred             HhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHH-hCCccccccccCCCeee
Q 020334          153 YIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-LGNREEYSILLNISMVH  231 (327)
Q Consensus       153 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~  231 (327)
                           .++.++|+.+|.++|.++..+++     ..++|++.++|++...  ..   .++..+ .+......   ..+|+|
T Consensus       135 -----~~~~s~Yg~sK~~~E~~~~~y~~-----~~~lr~~~~~~~~~~~--~~---~fi~~~~~~~~~~~~---~~s~~y  196 (298)
T PLN02778        135 -----NFTGSFYSKTKAMVEELLKNYEN-----VCTLRVRMPISSDLSN--PR---NFITKITRYEKVVNI---PNSMTI  196 (298)
T ss_pred             -----CCCCCchHHHHHHHHHHHHHhhc-----cEEeeecccCCccccc--HH---HHHHHHHcCCCeeEc---CCCCEE
Confidence                 23457899999999999988763     4688888778865221  11   123333 33332221   137999


Q ss_pred             HHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCC-C---CCCCCCCCcc--cccccccccChHHH-Hhcc
Q 020334          232 IDDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPE-Y---PIPNVDSLSE--IEGYKLSALSSKKL-LDIC  303 (327)
Q Consensus       232 v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~-~---~~~~~~~~~~--~~~~~~~~~d~~k~-~~lg  303 (327)
                      ++|++++++.+++.+. .|+||+ +++.+|++|+++.+++.++. +   .+... +...  .....+..+|++|+ +.++
T Consensus       197 v~D~v~al~~~l~~~~-~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~Ld~~k~~~~~~  274 (298)
T PLN02778        197 LDELLPISIEMAKRNL-TGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLE-EQAKVIVAPRSNNELDTTKLKREFP  274 (298)
T ss_pred             HHHHHHHHHHHHhCCC-CCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHH-HHHHHHhCCCccccccHHHHHHhcc
Confidence            9999999999997654 579997 67789999999999999883 1   11110 1001  01222347999999 6667


Q ss_pred             ccccccHHHHHHHHHHHHHH
Q 020334          304 FTYKYGIDEMFDGAIKCCKE  323 (327)
Q Consensus       304 ~~p~~~~~~~l~~~~~~~~~  323 (327)
                      -.+. ..+++++..++-.|.
T Consensus       275 ~~~~-~~~~~~~~~~~~~~~  293 (298)
T PLN02778        275 ELLP-IKESLIKYVFEPNKK  293 (298)
T ss_pred             cccc-hHHHHHHHHHHHHHh
Confidence            6666 678888888776654

>PLN02996 fatty acyl-CoA reductase

Probab=100.00  E-value=1.5e-32  Score=251.02  Aligned_cols=267  Identities=19%  Similarity=0.246  Sum_probs=182.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC---CeEEEEEcCCCCCcchhhh----hhC----------CCCC-----CCCeEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG---YFVTTTVRSDPEHKKDLSF----LTN----------LPGA-----SERLQIF   62 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~----~~~----------~~~~-----~~~~~~~   62 (327)
                      +++|||||||||||++|++.|++.+   .+|+++.|... .......    +..          .+..     ..+++++
T Consensus        11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~-~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i   89 (491)
T PLN02996         11 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASD-AKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV   89 (491)
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCC-CCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence            6899999999999999999999764   36899999433 2211111    100          0000     1578999


Q ss_pred             eCCCC-------ChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeee
Q 020334           63 NADLN-------DPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYF  135 (327)
Q Consensus        63 ~~D~~-------d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~  135 (327)
                      .||++       +.+.+..+++++|+|||+||..... .. .....++|+.++.+++++|++.+.+++|||+||+++||.
T Consensus        90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~-~~-~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~  167 (491)
T PLN02996         90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFD-ER-YDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGE  167 (491)
T ss_pred             ecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCc-CC-HHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecC
Confidence            99998       4455677888999999999987653 23 348899999999999999998644889999999999974


Q ss_pred             cCC--CCCcccCCC-C--------------------------CChhHh---------hh--cCCCchhhHhhhHHHHHHH
Q 020334          136 SGK--DVDMLDETF-W--------------------------SDEDYI---------RK--LDIWGKSYVLTKTLTERAA  175 (327)
Q Consensus       136 ~~~--~~~~~~E~~-~--------------------------~~~~~~---------~~--~~~~~~~Y~~sK~~~e~~~  175 (327)
                      ...  .+.++++.. +                          .+....         .+  ...+.+.|+.||.++|.++
T Consensus       168 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv  247 (491)
T PLN02996        168 KSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLL  247 (491)
T ss_pred             CCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHH
Confidence            211  112222110 0                          000000         01  1234568999999999999


Q ss_pred             HHHHHHcCCcEEEEecCceecCCCCCCCCchHHH------HHHH-HhCCcccccccc-C-CCeeeHHHHHHHHHHhhcCC
Q 020334          176 LEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRS------TLAM-VLGNREEYSILL-N-ISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       176 ~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~-~-~~~i~v~D~a~~~~~~~~~~  246 (327)
                      ..+.  .+++++++||++||||+..+ .+.++..      ++.. ..+....+...+ + +|++||+|+|++++.++...
T Consensus       248 ~~~~--~~lpv~i~RP~~V~G~~~~p-~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~  324 (491)
T PLN02996        248 GNFK--ENLPLVIIRPTMITSTYKEP-FPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAH  324 (491)
T ss_pred             HHhc--CCCCEEEECCCEeccCCcCC-CCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHh
Confidence            8875  38999999999999998655 2333221      2221 222222222222 2 89999999999999998753


Q ss_pred             ----CCCceEEEe-c--cccCHHHHHHHHHHhCCCCCC
Q 020334          247 ----DAKGRYICS-S--AKLTIQEMAEFLSAKHPEYPI  277 (327)
Q Consensus       247 ----~~~~~y~~~-~--~~~s~~e~~~~i~~~~~~~~~  277 (327)
                          ..+.+||++ +  .++|+.|+++.+.+..+..+.
T Consensus       325 ~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~  362 (491)
T PLN02996        325 AGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPW  362 (491)
T ss_pred             hccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCC
Confidence                234589974 5  579999999999987765443

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=1.9e-32  Score=239.29  Aligned_cols=266  Identities=15%  Similarity=0.166  Sum_probs=190.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      |+|||||||||||++++++|+++||+|++++| ++.....+   .     ..+++++.+|+.|++++.++++++|+|||+
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R-~~~~~~~l---~-----~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~   71 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVR-NLRKASFL---K-----EWGAELVYGDLSLPETLPPSFKGVTAIIDA   71 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-ChHHhhhH---h-----hcCCEEEECCCCCHHHHHHHHCCCCEEEEC
Confidence            47999999999999999999999999999999 43222111   1     136899999999999999999999999999


Q ss_pred             cCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhH
Q 020334           86 AAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYV  165 (327)
Q Consensus        86 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~  165 (327)
                      ++...   .+.. .+.++|+.++.+++++|++.+ +++|||+||..+..                        .+.++|.
T Consensus        72 ~~~~~---~~~~-~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~~------------------------~~~~~~~  122 (317)
T CHL00194         72 STSRP---SDLY-NAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNAEQ------------------------YPYIPLM  122 (317)
T ss_pred             CCCCC---CCcc-chhhhhHHHHHHHHHHHHHcC-CCEEEEeccccccc------------------------cCCChHH
Confidence            86422   1222 577889999999999999998 99999999854321                        1123588


Q ss_pred             hhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc-CCCeeeHHHHHHHHHHhhc
Q 020334          166 LTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL-NISMVHIDDVARAHIFLLE  244 (327)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~~~~~~~~  244 (327)
                      .+|..+|++++    +.+++++++||+.+|+....    ...   .....+.+..+.... .++|+|++|+|++++.+++
T Consensus       123 ~~K~~~e~~l~----~~~l~~tilRp~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~  191 (317)
T CHL00194        123 KLKSDIEQKLK----KSGIPYTIFRLAGFFQGLIS----QYA---IPILEKQPIWITNESTPISYIDTQDAAKFCLKSLS  191 (317)
T ss_pred             HHHHHHHHHHH----HcCCCeEEEeecHHhhhhhh----hhh---hhhccCCceEecCCCCccCccCHHHHHHHHHHHhc
Confidence            99999998774    46899999999988864211    010   111122333332222 3799999999999999998


Q ss_pred             CCC-CCceEEE-eccccCHHHHHHHHHHhCCCC----CCCCCC--------C---C----ccc------ccc-cccccCh
Q 020334          245 YPD-AKGRYIC-SSAKLTIQEMAEFLSAKHPEY----PIPNVD--------S---L----SEI------EGY-KLSALSS  296 (327)
Q Consensus       245 ~~~-~~~~y~~-~~~~~s~~e~~~~i~~~~~~~----~~~~~~--------~---~----~~~------~~~-~~~~~d~  296 (327)
                      ++. .+++||+ +++.+|++|+++.+.+..|..    .+|.+.        .   .    ...      ... .+...+.
T Consensus       192 ~~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  271 (317)
T CHL00194        192 LPETKNKTFPLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSM  271 (317)
T ss_pred             CccccCcEEEecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCH
Confidence            754 4568997 467899999999999987721    122100        0   0    000      011 2344567


Q ss_pred             HHH-Hhcccccc--ccHHHHHHHHHHH
Q 020334          297 KKL-LDICFTYK--YGIDEMFDGAIKC  320 (327)
Q Consensus       297 ~k~-~~lg~~p~--~~~~~~l~~~~~~  320 (327)
                      .++ +.||+.|.  .++++++++.++.
T Consensus       272 ~~~~~~~g~~p~~~~~~~~~~~~~~~~  298 (317)
T CHL00194        272 AELYKIFKIDPNELISLEDYFQEYFER  298 (317)
T ss_pred             HHHHHHhCCChhhhhhHHHHHHHHHHH
Confidence            777 88999984  4888888887753

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-31  Score=254.85  Aligned_cols=299  Identities=20%  Similarity=0.196  Sum_probs=206.4

Q ss_pred             CeEEEeCCcchhHHHHHHHHH--HCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh------hHHHHHhc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLL--DHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP------ESFDAAIA   77 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~------~~~~~~~~   77 (327)
                      |+|||||||||||++|+++|+  +.|++|++++| ++.. .....+.... ...+++++.+|++|+      +.+.++ .
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R-~~~~-~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~   76 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVR-RQSL-SRLEALAAYW-GADRVVPLVGDLTEPGLGLSEADIAEL-G   76 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEEC-cchH-HHHHHHHHhc-CCCcEEEEecccCCccCCcCHHHHHHh-c
Confidence            479999999999999999999  57999999999 4322 2222211100 014689999999984      445555 8


Q ss_pred             CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhc
Q 020334           78 GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKL  157 (327)
Q Consensus        78 ~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~  157 (327)
                      ++|+|||||+...... . .....+.|+.++.+++++|++.+ +++|||+||..+|+..   ..+++|+++..      .
T Consensus        77 ~~D~Vih~Aa~~~~~~-~-~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~g~~---~~~~~e~~~~~------~  144 (657)
T PRK07201         77 DIDHVVHLAAIYDLTA-D-EEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVAGDY---EGVFREDDFDE------G  144 (657)
T ss_pred             CCCEEEECceeecCCC-C-HHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccccCc---cCccccccchh------h
Confidence            8999999999765432 2 33778999999999999999987 8999999999998632   23455554311      0


Q ss_pred             CCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC---c--hHHHHHHHHhCCcc--cc-c-cccCCC
Q 020334          158 DIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA---G--SVRSTLAMVLGNRE--EY-S-ILLNIS  228 (327)
Q Consensus       158 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~---~--~~~~~~~~~~~~~~--~~-~-~~~~~~  228 (327)
                      ..+.++|+.+|..+|++++.   ..+++++++||+.+|||.......   .  .+...+......+.  .. . ..+.++
T Consensus       145 ~~~~~~Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (657)
T PRK07201        145 QGLPTPYHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTN  221 (657)
T ss_pred             cCCCCchHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeee
Confidence            23356799999999999874   358999999999999987543211   1  11122222211111  11 1 123379


Q ss_pred             eeeHHHHHHHHHHhhcCCCC-CceEEE-eccccCHHHHHHHHHHhCCCCC-------CCCCC--CCcc-------c----
Q 020334          229 MVHIDDVARAHIFLLEYPDA-KGRYIC-SSAKLTIQEMAEFLSAKHPEYP-------IPNVD--SLSE-------I----  286 (327)
Q Consensus       229 ~i~v~D~a~~~~~~~~~~~~-~~~y~~-~~~~~s~~e~~~~i~~~~~~~~-------~~~~~--~~~~-------~----  286 (327)
                      ++|++|+++++..+++.+.. +++||+ +++++|++|+++.+++.++...       +|.+.  ....       .    
T Consensus       222 ~v~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  301 (657)
T PRK07201        222 IVPVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAV  301 (657)
T ss_pred             eeeHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHH
Confidence            99999999999999876544 558997 4678999999999999887322       12100  0000       0    


Q ss_pred             ------------ccccccccChHHH-Hhc---cccccccHHHHHHHHHHHHHHc
Q 020334          287 ------------EGYKLSALSSKKL-LDI---CFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       287 ------------~~~~~~~~d~~k~-~~l---g~~p~~~~~~~l~~~~~~~~~~  324 (327)
                                  .......+|++|+ +.|   |+.+. .+.+.+.++++||.++
T Consensus       302 ~~~~~~~~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p-~~~~~~~~~~~~~~~~  354 (657)
T PRK07201        302 ATQLGIPPEVLDFVNYPTTFDSRETRAALKGSGIEVP-RLASYAPRLWDYWERH  354 (657)
T ss_pred             HHhcCCCHHHHHhccCCCeeccHHHHHHhccCCcCCC-ChHHHHHHHHHHHHhc
Confidence                        0112357888998 666   66666 8889999999988653

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.98  E-value=5.6e-30  Score=228.67  Aligned_cols=308  Identities=19%  Similarity=0.220  Sum_probs=203.8

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcc---hhhhh-hC--CC--C-CCCCeEEEeCCCCCh------
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKK---DLSFL-TN--LP--G-ASERLQIFNADLNDP------   69 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~---~~~~~-~~--~~--~-~~~~~~~~~~D~~d~------   69 (327)
                      +|||||||||||++++++|+++|  ++|++++| ......   .+... ..  ..  . ...+++++.+|++++      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~   79 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVR-AASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSD   79 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEc-cCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCH
Confidence            58999999999999999999998  67999999 433221   11111 00  00  0 014789999999754      


Q ss_pred             hHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           70 ESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        70 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                      +.+..+..++|+|||+|+.....  .+.....+.|+.++.++++++.+.+ .++|+|+||.++|+...  ..+..|+++.
T Consensus        80 ~~~~~~~~~~d~vih~a~~~~~~--~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~~~~~--~~~~~~~~~~  154 (367)
T TIGR01746        80 AEWERLAENVDTIVHNGALVNWV--YPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVLAAID--LSTVTEDDAI  154 (367)
T ss_pred             HHHHHHHhhCCEEEeCCcEeccC--CcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccccCCcC--CCCccccccc
Confidence            45667778899999999976533  2344778899999999999999887 78899999999986322  2223343321


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--chHHHHHHHHhCCcccccccc--
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA--GSVRSTLAMVLGNREEYSILL--  225 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--  225 (327)
                      ..    ....+.+.|+.+|+.+|.+++.+.+. |++++++||+.+||+.......  ..+..+.......+ .++...  
T Consensus       155 ~~----~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~-~~p~~~~~  228 (367)
T TIGR01746       155 VT----PPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALG-AYPDSPEL  228 (367)
T ss_pred             cc----cccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhC-CCCCCCcc
Confidence            11    11123467999999999999887664 9999999999999984433211  22222222221122 122222  


Q ss_pred             CCCeeeHHHHHHHHHHhhcCCCC---CceEEE-eccccCHHHHHHHHHHhCC-CCC-CCC--C-------------C---
Q 020334          226 NISMVHIDDVARAHIFLLEYPDA---KGRYIC-SSAKLTIQEMAEFLSAKHP-EYP-IPN--V-------------D---  281 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~~~---~~~y~~-~~~~~s~~e~~~~i~~~~~-~~~-~~~--~-------------~---  281 (327)
                      ..+++|++|++++++.++..+..   +++||+ +++++|+.|+++.+.+ .+ ... ++.  +             .   
T Consensus       229 ~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~~~~~~w~~~~~~~~~~~~~~~~~  307 (367)
T TIGR01746       229 TEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKLVSFDEWLQRLEDSDTAKRDPPRY  307 (367)
T ss_pred             ccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCcCCHHHHHHHHHHhhhcCCCcccc
Confidence            36899999999999999877654   568996 4588999999999988 44 111 110  0             0   


Q ss_pred             CCccc---c-------cccccccChHHH----HhccccccccHHHHHHHHHHHHHHcCCC
Q 020334          282 SLSEI---E-------GYKLSALSSKKL----LDICFTYKYGIDEMFDGAIKCCKERGYL  327 (327)
Q Consensus       282 ~~~~~---~-------~~~~~~~d~~k~----~~lg~~p~~~~~~~l~~~~~~~~~~~~~  327 (327)
                      +..++   .       ......+++++.    +.++..+..--.+.+++++++|+..|+|
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (367)
T TIGR01746       308 PLLPLLHFLGAGFEEPEFDTRNLDSRSTAEALEGDGIREPSITAPLLHLYLQYLKEIGFL  367 (367)
T ss_pred             cchhhhhccCCCcccccccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHcCCC
Confidence            00000   0       001123455544    4456554434567899999999998875

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.97  E-value=2.2e-30  Score=209.09  Aligned_cols=277  Identities=23%  Similarity=0.279  Sum_probs=188.5

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-CCCEEEEcc
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-GCAGVIHVA   86 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~vih~a   86 (327)
                      |+|||||||||++|+..|.+.||+|++++|+.+.....+.         ..++       ..+.+..... ++|+|||+|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~---------~~v~-------~~~~~~~~~~~~~DavINLA   64 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH---------PNVT-------LWEGLADALTLGIDAVINLA   64 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC---------cccc-------ccchhhhcccCCCCEEEECC
Confidence            6899999999999999999999999999994433222110         1111       2233444554 799999999


Q ss_pred             CCCC---CCCCchHHHHHHHHHhHHHHHHHHHHhcCC-ccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           87 APID---IDGKETEEVMTQRAVNGTIGILKSCLKSGT-VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        87 ~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      |..-   .+.....+...+.-+..|..|.++..+..+ .+.+|.-|.++.|  ++..+..++|+++...+++        
T Consensus        65 G~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyY--G~~~~~~~tE~~~~g~~Fl--------  134 (297)
T COG1090          65 GEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYY--GHSGDRVVTEESPPGDDFL--------  134 (297)
T ss_pred             CCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEe--cCCCceeeecCCCCCCChH--------
Confidence            8533   234445557788889999999999996652 4444444444434  5778889999986443332        


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC-CCeeeHHHHHHHHHH
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN-ISMVHIDDVARAHIF  241 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~~~~~  241 (327)
                        +..-..=|+..... +..|.|++++|.|.|.++..+. .+..+.. .+  .+-+-.++++.+ ++|||++|+++++.+
T Consensus       135 --a~lc~~WE~~a~~a-~~~gtRvvllRtGvVLs~~GGa-L~~m~~~-fk--~glGG~~GsGrQ~~SWIhieD~v~~I~f  207 (297)
T COG1090         135 --AQLCQDWEEEALQA-QQLGTRVVLLRTGVVLSPDGGA-LGKMLPL-FK--LGLGGKLGSGRQWFSWIHIEDLVNAILF  207 (297)
T ss_pred             --HHHHHHHHHHHhhh-hhcCceEEEEEEEEEecCCCcc-hhhhcch-hh--hccCCccCCCCceeeeeeHHHHHHHHHH
Confidence              22222334444443 3359999999999999986332 1222211 11  233334666666 699999999999999


Q ss_pred             hhcCCCCCceEEE-eccccCHHHHHHHHHHhCC---CCCCCCCCCCccc--ccccc-----cccChHHHHhccccccc-c
Q 020334          242 LLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHP---EYPIPNVDSLSEI--EGYKL-----SALSSKKLLDICFTYKY-G  309 (327)
Q Consensus       242 ~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~---~~~~~~~~~~~~~--~~~~~-----~~~d~~k~~~lg~~p~~-~  309 (327)
                      ++++....|.||+ ++.+++.+|+++.+++.+.   ..++|.+  ..++  .+...     .+.-+.|+...||++++ +
T Consensus       208 ll~~~~lsGp~N~taP~PV~~~~F~~al~r~l~RP~~~~vP~~--~~rl~LGe~a~~lL~gQrvlP~kl~~aGF~F~y~d  285 (297)
T COG1090         208 LLENEQLSGPFNLTAPNPVRNKEFAHALGRALHRPAILPVPSF--ALRLLLGEMADLLLGGQRVLPKKLEAAGFQFQYPD  285 (297)
T ss_pred             HHhCcCCCCcccccCCCcCcHHHHHHHHHHHhCCCccccCcHH--HHHHHhhhhHHHHhccchhhHHHHHHCCCeeecCC
Confidence            9999999999996 6789999999999999876   3334431  1111  22222     33445555667999999 9


Q ss_pred             HHHHHHHHHH
Q 020334          310 IDEMFDGAIK  319 (327)
Q Consensus       310 ~~~~l~~~~~  319 (327)
                      ++++|.+.+.
T Consensus       286 l~~AL~~il~  295 (297)
T COG1090         286 LEEALADILK  295 (297)
T ss_pred             HHHHHHHHHh
Confidence            9999999875

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.97  E-value=1.5e-30  Score=216.50  Aligned_cols=232  Identities=19%  Similarity=0.166  Sum_probs=170.9

Q ss_pred             EEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhh-hhhCCCCCCCCe----EEEeCCCCChhHHHHHhc--CC
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLS-FLTNLPGASERL----QIFNADLNDPESFDAAIA--GC   79 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~----~~~~~D~~d~~~~~~~~~--~~   79 (327)
                      ||||||+|.||+.|+++|++.+ .++++++| +......+. .+..... ..++    .++.+|+.|.+.+..+++  ++
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~-~E~~l~~l~~~l~~~~~-~~~v~~~~~~vigDvrd~~~l~~~~~~~~p   78 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDR-DENKLYELERELRSRFP-DPKVRFEIVPVIGDVRDKERLNRIFEEYKP   78 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES--HHHHHHHHHHCHHHC---TTCEEEEE--CTSCCHHHHHHHHTT--T-
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCC-ChhHHHHHHHHHhhccc-ccCcccccCceeecccCHHHHHHHHhhcCC
Confidence            7999999999999999999987 57999999 432222222 2211000 1234    346899999999999998  89


Q ss_pred             CEEEEccCCCC--CCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhc
Q 020334           80 AGVIHVAAPID--IDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKL  157 (327)
Q Consensus        80 d~vih~a~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~  157 (327)
                      |+|+|+||..+  ..+.++. +..++|+.|+.+++++|.+++ +++||++||.-+.                        
T Consensus        79 diVfHaAA~KhVpl~E~~p~-eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTDKAv------------------------  132 (293)
T PF02719_consen   79 DIVFHAAALKHVPLMEDNPF-EAVKTNVLGTQNVAEAAIEHG-VERFVFISTDKAV------------------------  132 (293)
T ss_dssp             SEEEE------HHHHCCCHH-HHHHHHCHHHHHHHHHHHHTT--SEEEEEEECGCS------------------------
T ss_pred             CEEEEChhcCCCChHHhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEccccccC------------------------
Confidence            99999999877  2344565 999999999999999999998 9999999997654                        


Q ss_pred             CCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHh-CCccccccccC-CCeeeH
Q 020334          158 DIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVL-GNREEYSILLN-ISMVHI  232 (327)
Q Consensus       158 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~i~v  232 (327)
                       .|.+.||.||+.+|.++..++...   +.+++++|+|+|.|..     .+.++.+.+++. ++++.+.+... |=|..+
T Consensus       133 -~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~-----GSVip~F~~Qi~~g~PlTvT~p~mtRffmti  206 (293)
T PF02719_consen  133 -NPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR-----GSVIPLFKKQIKNGGPLTVTDPDMTRFFMTI  206 (293)
T ss_dssp             -S--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT-----TSCHHHHHHHHHTTSSEEECETT-EEEEE-H
T ss_pred             -CCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC-----CcHHHHHHHHHHcCCcceeCCCCcEEEEecH
Confidence             567899999999999999988655   6899999999999974     567777776654 55565655544 789999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCC
Q 020334          233 DDVARAHIFLLEYPDAKGRYICS-SAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       233 ~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~e~~~~i~~~~~  273 (327)
                      +|+++.++.++.....+.+|... |+++++.|+++.+.+..|
T Consensus       207 ~EAv~Lvl~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g  248 (293)
T PF02719_consen  207 EEAVQLVLQAAALAKGGEIFVLDMGEPVKILDLAEAMIELSG  248 (293)
T ss_dssp             HHHHHHHHHHHHH--TTEEEEE---TCEECCCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhcc
Confidence            99999999999887777788874 799999999999999887

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.97  E-value=6.8e-29  Score=221.66  Aligned_cols=226  Identities=16%  Similarity=0.085  Sum_probs=168.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc--hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----C
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK--DLSFLTNLPGASERLQIFNADLNDPESFDAAIA----G   78 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~   78 (327)
                      +++|||||||||||++++++|+++|++|++++|+......  .......   ..++++++.+|++|++++.++++    +
T Consensus        60 ~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~---~~~~v~~v~~Dl~d~~~l~~~~~~~~~~  136 (390)
T PLN02657         60 DVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKK---ELPGAEVVFGDVTDADSLRKVLFSEGDP  136 (390)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhh---hcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999994321110  0011110   12478999999999999999887    5


Q ss_pred             CCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcC
Q 020334           79 CAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLD  158 (327)
Q Consensus        79 ~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (327)
                      +|+||||++.....   .. ..+++|+.++.++++++++.+ +++||++||.+++.                        
T Consensus       137 ~D~Vi~~aa~~~~~---~~-~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~~------------------------  187 (390)
T PLN02657        137 VDVVVSCLASRTGG---VK-DSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQK------------------------  187 (390)
T ss_pred             CcEEEECCccCCCC---Cc-cchhhHHHHHHHHHHHHHHcC-CCEEEEEeeccccC------------------------
Confidence            99999998753211   11 456789999999999999988 89999999987652                        


Q ss_pred             CCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC--C-CeeeHHHH
Q 020334          159 IWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN--I-SMVHIDDV  235 (327)
Q Consensus       159 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~i~v~D~  235 (327)
                       |...|..+|...|+.+..  .+.+++++++||+.+||+.     ...+   .....+.+..+...+.  + ++||++|+
T Consensus       188 -p~~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~-----~~~~---~~~~~g~~~~~~GdG~~~~~~~I~v~Dl  256 (390)
T PLN02657        188 -PLLEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSL-----GGQV---EIVKDGGPYVMFGDGKLCACKPISEADL  256 (390)
T ss_pred             -cchHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhccc-----HHHH---HhhccCCceEEecCCcccccCceeHHHH
Confidence             134588999999998865  3468999999999999752     1111   1112344433222222  3 57999999


Q ss_pred             HHHHHHhhcCCC-CCceEEEec--cccCHHHHHHHHHHhCC
Q 020334          236 ARAHIFLLEYPD-AKGRYICSS--AKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       236 a~~~~~~~~~~~-~~~~y~~~~--~~~s~~e~~~~i~~~~~  273 (327)
                      |++++.++.++. .+++||+++  +.+|++|+++.+.+.+|
T Consensus       257 A~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG  297 (390)
T PLN02657        257 ASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILG  297 (390)
T ss_pred             HHHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhC
Confidence            999999987654 456899754  47999999999999888

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.97  E-value=1.9e-28  Score=234.19  Aligned_cols=261  Identities=16%  Similarity=0.132  Sum_probs=185.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~   81 (327)
                      ++|+||||||+||||++|++.|.++|++|.. ..                          +|++|.+.+...+.  ++|+
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-~~--------------------------~~l~d~~~v~~~i~~~~pd~  431 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY-GK--------------------------GRLEDRSSLLADIRNVKPTH  431 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe-ec--------------------------cccccHHHHHHHHHhhCCCE
Confidence            3578999999999999999999999988731 11                          45778888877776  7899


Q ss_pred             EEEccCCCCC-----CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecC----CCCCcccCCCCCChh
Q 020334           82 VIHVAAPIDI-----DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSG----KDVDMLDETFWSDED  152 (327)
Q Consensus        82 vih~a~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~----~~~~~~~E~~~~~~~  152 (327)
                      |||||+....     ...++. +.+++|+.++.+|+++|++.+ + +++++||.++|+++.    ....+++|+++.   
T Consensus       432 Vih~Aa~~~~~~~~~~~~~~~-~~~~~N~~gt~~l~~a~~~~g-~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~---  505 (668)
T PLN02260        432 VFNAAGVTGRPNVDWCESHKV-ETIRANVVGTLTLADVCRENG-L-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKP---  505 (668)
T ss_pred             EEECCcccCCCCCChHHhCHH-HHHHHHhHHHHHHHHHHHHcC-C-eEEEEcccceecCCcccccccCCCCCcCCCC---
Confidence            9999997632     122444 889999999999999999988 6 578889989986432    113467887642   


Q ss_pred             HhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeH
Q 020334          153 YIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHI  232 (327)
Q Consensus       153 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  232 (327)
                           .++.++|+.+|..+|+++..+.     +..++|+.++||++... ...++..+++.  .....++    .+..++
T Consensus       506 -----~~~~~~Yg~sK~~~E~~~~~~~-----~~~~~r~~~~~~~~~~~-~~nfv~~~~~~--~~~~~vp----~~~~~~  568 (668)
T PLN02260        506 -----NFTGSFYSKTKAMVEELLREYD-----NVCTLRVRMPISSDLSN-PRNFITKISRY--NKVVNIP----NSMTVL  568 (668)
T ss_pred             -----CCCCChhhHHHHHHHHHHHhhh-----hheEEEEEEecccCCCC-ccHHHHHHhcc--ceeeccC----CCceeh
Confidence                 2345889999999999998774     35778888888754221 12333333321  1112221    357888


Q ss_pred             HHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCC-CC---CCCCCCCCc--c-cccccccccChHHH-Hhcc
Q 020334          233 DDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHP-EY---PIPNVDSLS--E-IEGYKLSALSSKKL-LDIC  303 (327)
Q Consensus       233 ~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~-~~---~~~~~~~~~--~-~~~~~~~~~d~~k~-~~lg  303 (327)
                      +|++.+++.+++. ..+|+||+ +++.+|+.|+++.+++.++ .+   ++... +..  . ...+.. .+|++|+ +.+|
T Consensus       569 ~~~~~~~~~l~~~-~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~-~~~~~~~a~rp~~-~l~~~k~~~~~~  645 (668)
T PLN02260        569 DELLPISIEMAKR-NLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLE-EQAKVIVAPRSNN-EMDASKLKKEFP  645 (668)
T ss_pred             hhHHHHHHHHHHh-CCCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHH-HhhhHhhCCCccc-cccHHHHHHhCc
Confidence            9999998888875 34689997 4567999999999999774 22   12211 122  1 133444 8999999 6688


Q ss_pred             ccccccHHHHHHHHHH
Q 020334          304 FTYKYGIDEMFDGAIK  319 (327)
Q Consensus       304 ~~p~~~~~~~l~~~~~  319 (327)
                      . +. +|+++|++++.
T Consensus       646 ~-~~-~~~~~l~~~~~  659 (668)
T PLN02260        646 E-LL-SIKESLIKYVF  659 (668)
T ss_pred             c-cc-chHHHHHHHHh
Confidence            8 77 99999998875

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.96  E-value=5.3e-28  Score=213.62  Aligned_cols=236  Identities=19%  Similarity=0.167  Sum_probs=194.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC--C
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIAG--C   79 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~   79 (327)
                      .+|+||||||+|-||+.+++++++.+ .+++.++| +..+.... .++..... ..++.++-||+.|.+.+..++++  +
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~-~E~~~~~i~~el~~~~~-~~~~~~~igdVrD~~~~~~~~~~~kv  326 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSR-DEYKLYLIDMELREKFP-ELKLRFYIGDVRDRDRVERAMEGHKV  326 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecC-chHHHHHHHHHHHhhCC-CcceEEEecccccHHHHHHHHhcCCC
Confidence            36899999999999999999999986 56888888 44333222 22322211 35789999999999999999986  9


Q ss_pred             CEEEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhc
Q 020334           80 AGVIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKL  157 (327)
Q Consensus        80 d~vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~  157 (327)
                      |+|+|+||..+.  .+.++. +...+|+.|+.|++++|.+.+ +++||.+||.-+.                        
T Consensus       327 d~VfHAAA~KHVPl~E~nP~-Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTDKAV------------------------  380 (588)
T COG1086         327 DIVFHAAALKHVPLVEYNPE-EAIKTNVLGTENVAEAAIKNG-VKKFVLISTDKAV------------------------  380 (588)
T ss_pred             ceEEEhhhhccCcchhcCHH-HHHHHhhHhHHHHHHHHHHhC-CCEEEEEecCccc------------------------
Confidence            999999998773  344555 999999999999999999999 9999999997654                        


Q ss_pred             CCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHH-hCCccccccccC-CCeeeH
Q 020334          158 DIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-LGNREEYSILLN-ISMVHI  232 (327)
Q Consensus       158 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~i~v  232 (327)
                       .|.|.||.||+.+|.++..+.++.   +.+++++|+|||.|..     .+.++.+.+++ .|++..+++... |=|..+
T Consensus       381 -~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr-----GSViPlFk~QI~~GgplTvTdp~mtRyfMTI  454 (588)
T COG1086         381 -NPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-----GSVIPLFKKQIAEGGPLTVTDPDMTRFFMTI  454 (588)
T ss_pred             -CCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC-----CCCHHHHHHHHHcCCCccccCCCceeEEEEH
Confidence             568899999999999999998744   3899999999999975     56777777665 455566665554 789999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCC
Q 020334          233 DDVARAHIFLLEYPDAKGRYICS-SAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       233 ~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~e~~~~i~~~~~  273 (327)
                      +|+++.++.+......|.+|... |+++++.|+++.+.+..|
T Consensus       455 ~EAv~LVlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~g  496 (588)
T COG1086         455 PEAVQLVLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAG  496 (588)
T ss_pred             HHHHHHHHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence            99999999999887777789885 799999999999988776

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.96  E-value=7.5e-29  Score=208.99  Aligned_cols=223  Identities=25%  Similarity=0.327  Sum_probs=128.0

Q ss_pred             EeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcchhhhh----hCCC-------CCCCCeEEEeCCCCCh------h
Q 020334           10 VTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKDLSFL----TNLP-------GASERLQIFNADLNDP------E   70 (327)
Q Consensus        10 VtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~----~~~~-------~~~~~~~~~~~D~~d~------~   70 (327)
                      |||||||||++|+++|++++.  +|+++.| ..........+    ....       ....+++++.||++++      +
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR-~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~   79 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVR-ASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE   79 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE--SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEe-CcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence            799999999999999999876  8999999 43222222222    1100       0136999999999975      4


Q ss_pred             HHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCC-C
Q 020334           71 SFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFW-S  149 (327)
Q Consensus        71 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~-~  149 (327)
                      .+..+.+++|+||||||..++..  +..+.++.||.+++++++.|.+.. .++|+|+||+.+.+..   ...+.|... .
T Consensus        80 ~~~~L~~~v~~IiH~Aa~v~~~~--~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~v~~~~---~~~~~~~~~~~  153 (249)
T PF07993_consen   80 DYQELAEEVDVIIHCAASVNFNA--PYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAYVAGSR---PGTIEEKVYPE  153 (249)
T ss_dssp             HHHHHHHH--EEEE--SS-SBS---S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGGTTS----TTT--SSS-HH
T ss_pred             Hhhccccccceeeecchhhhhcc--cchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccccccCCC---CCccccccccc
Confidence            56777788999999999887553  333678999999999999999766 5699999995544321   111211100 0


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC--CchHHHHHHH-HhCCccc-cccc-
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKF--AGSVRSTLAM-VLGNREE-YSIL-  224 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~--~~~~~~~~~~-~~~~~~~-~~~~-  224 (327)
                      ............+.|.+||+.+|++++.++++.|++++|+||+.|+|....+..  ......++.. ...+..+ .... 
T Consensus       154 ~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~  233 (249)
T PF07993_consen  154 EEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDP  233 (249)
T ss_dssp             H--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB--
T ss_pred             ccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCC
Confidence            000011123456789999999999999999888999999999999995433221  2222222222 2222222 1111 


Q ss_pred             -cCCCeeeHHHHHHHH
Q 020334          225 -LNISMVHIDDVARAH  239 (327)
Q Consensus       225 -~~~~~i~v~D~a~~~  239 (327)
                       ...++++||.+|++|
T Consensus       234 ~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  234 DARLDLVPVDYVARAI  249 (249)
T ss_dssp             -TT--EEEHHHHHHHH
T ss_pred             CceEeEECHHHHHhhC
Confidence             127999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK12320 hypothetical protein; Provisional

Probab=99.96  E-value=7e-27  Score=217.55  Aligned_cols=236  Identities=16%  Similarity=0.212  Sum_probs=166.3

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      ||||||||+||||++|+++|+++|++|++++| .+....           ..+++++.+|++|+. +.+++.++|+|||+
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr-~~~~~~-----------~~~ve~v~~Dl~d~~-l~~al~~~D~VIHL   67 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQ-HPHDAL-----------DPRVDYVCASLRNPV-LQELAGEADAVIHL   67 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-Chhhcc-----------cCCceEEEccCCCHH-HHHHhcCCCEEEEc
Confidence            37999999999999999999999999999998 322110           146789999999985 77888899999999


Q ss_pred             cCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhH
Q 020334           86 AAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYV  165 (327)
Q Consensus        86 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~  165 (327)
                      |+....       .....|+.++.+++++|++.+ + ++||+||.  +|  .+                       ..|.
T Consensus        68 Aa~~~~-------~~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~--~G--~~-----------------------~~~~  111 (699)
T PRK12320         68 APVDTS-------APGGVGITGLAHVANAAARAG-A-RLLFVSQA--AG--RP-----------------------ELYR  111 (699)
T ss_pred             CccCcc-------chhhHHHHHHHHHHHHHHHcC-C-eEEEEECC--CC--CC-----------------------cccc
Confidence            986321       123589999999999999988 5 79999985  32  10                       0122


Q ss_pred             hhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcC
Q 020334          166 LTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                          .+|.++.    .++++++++|++++|||+........+..++......       ....++|++|++++++.+++.
T Consensus       112 ----~aE~ll~----~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~-------~pI~vIyVdDvv~alv~al~~  176 (699)
T PRK12320        112 ----QAETLVS----TGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSA-------RPIRVLHLDDLVRFLVLALNT  176 (699)
T ss_pred             ----HHHHHHH----hcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcC-------CceEEEEHHHHHHHHHHHHhC
Confidence                3565543    3569999999999999965432233444433322111       113479999999999999987


Q ss_pred             CCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHH-HhccccccccHHH
Q 020334          246 PDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL-LDICFTYKYGIDE  312 (327)
Q Consensus       246 ~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p~~~~~~  312 (327)
                      +. .|+||+ +++.+|++|+++.+....+...+..      ........-|.+.. ..++|.|+.+|+.
T Consensus       177 ~~-~GiyNIG~~~~~Si~el~~~i~~~~p~~~~~~------~~~~~~~~pdi~~a~~~~~w~~~~~~~~  238 (699)
T PRK12320        177 DR-NGVVDLATPDTTNVVTAWRLLRSVDPHLRTRR------VRSWEQLIPEVDIAAVQEDWNFEFGWQA  238 (699)
T ss_pred             CC-CCEEEEeCCCeeEHHHHHHHHHHhCCCccccc------cccHHHhCCCCchhhhhcCCCCcchHHH
Confidence            43 569996 6778999999999977644221111      11122234455555 6789999986553

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.95  E-value=5.6e-27  Score=215.91  Aligned_cols=260  Identities=19%  Similarity=0.235  Sum_probs=173.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC---eEEEEEcCCCCCcchhhhh----hC----------CCC-----CCCCeEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY---FVTTTVRSDPEHKKDLSFL----TN----------LPG-----ASERLQIF   62 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~----~~----------~~~-----~~~~~~~~   62 (327)
                      .++|||||||||||++|++.|++.+.   +|+++.|... .......+    ..          .+.     ...+++++
T Consensus       119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~-~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKD-KEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCC-chhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            68999999999999999999998653   6899999432 22111111    10          000     13578999


Q ss_pred             eCCCCCh------hHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeec
Q 020334           63 NADLNDP------ESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFS  136 (327)
Q Consensus        63 ~~D~~d~------~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~  136 (327)
                      .||++++      +..+.+.+++|+|||+|+...+.  ......+++|+.++.+++++|++.+..++|||+||+++|+..
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~--~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~  275 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFD--ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQR  275 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccc--cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCC
Confidence            9999987      45566667899999999987644  233488999999999999999887547899999999999743


Q ss_pred             CCCCCcccCCCCC----------------------Ch------------------hHh---h-------hcCCCchhhHh
Q 020334          137 GKDVDMLDETFWS----------------------DE------------------DYI---R-------KLDIWGKSYVL  166 (327)
Q Consensus       137 ~~~~~~~~E~~~~----------------------~~------------------~~~---~-------~~~~~~~~Y~~  166 (327)
                         ...+.|....                      +.                  +..   .       .....++.|..
T Consensus       276 ---~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~  352 (605)
T PLN02503        276 ---QGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVF  352 (605)
T ss_pred             ---CCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHH
Confidence               1223332211                      00                  000   0       11344688999


Q ss_pred             hhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHH-------HHHHHHhCCcccccccc--CCCeeeHHHHHH
Q 020334          167 TKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVR-------STLAMVLGNREEYSILL--NISMVHIDDVAR  237 (327)
Q Consensus       167 sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~--~~~~i~v~D~a~  237 (327)
                      ||.++|.++....  .++|++|+||+.|.+....+ ++.+..       .......|.-..+...+  ..|+|+||.+++
T Consensus       353 TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP-~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvn  429 (605)
T PLN02503        353 TKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDP-FPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVN  429 (605)
T ss_pred             HHHHHHHHHHHhc--CCCCEEEEcCCEecccccCC-ccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHH
Confidence            9999999998654  47999999999994432221 111111       11111111111122222  269999999999


Q ss_pred             HHHHhhcC-----CCCCceEEEe-c--cccCHHHHHHHHHHhCC
Q 020334          238 AHIFLLEY-----PDAKGRYICS-S--AKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       238 ~~~~~~~~-----~~~~~~y~~~-~--~~~s~~e~~~~i~~~~~  273 (327)
                      +++.++..     .....+||++ +  .+++++|+.+.+.+.+.
T Consensus       430 a~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~  473 (605)
T PLN02503        430 ATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYK  473 (605)
T ss_pred             HHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHh
Confidence            99998432     1234699974 5  67999999999987544

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.95  E-value=9.3e-28  Score=202.99  Aligned_cols=257  Identities=20%  Similarity=0.196  Sum_probs=172.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCc--chhhhhhC-----CCCCCCCeEEEeCCCC------ChhH
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHK--KDLSFLTN-----LPGASERLQIFNADLN------DPES   71 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~D~~------d~~~   71 (327)
                      +++|+||||||+|.+|++.|+.+- .+|++++|.+++..  .++.....     .+....+++.+.||+.      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999999874 59999999544221  22222221     0122478999999998      3457


Q ss_pred             HHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCC--cccCCCCC
Q 020334           72 FDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVD--MLDETFWS  149 (327)
Q Consensus        72 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~--~~~E~~~~  149 (327)
                      +.++.+++|.|||+||.+++-  .++.+....||.|+..+++.|...+ .|.+.|+||.+|+........  ..+|.++ 
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~v--~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~-  156 (382)
T COG3320          81 WQELAENVDLIIHNAALVNHV--FPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFDEISP-  156 (382)
T ss_pred             HHHHhhhcceEEecchhhccc--CcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeeccccccCCCccccccccc-
Confidence            888888999999999987743  4455889999999999999999877 889999999999753322211  1222222 


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC--CchHHHHHHHHhCCccccccccCC
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKF--AGSVRSTLAMVLGNREEYSILLNI  227 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  227 (327)
                         .......+.++|++||+.+|.+++...+. |+|++|+|||.|.|+...+.+  ..++..++......+.........
T Consensus       157 ---~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~~~~~  232 (382)
T COG3320         157 ---TRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSEYSL  232 (382)
T ss_pred             ---cccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCcccch
Confidence               12223466789999999999999999886 999999999999999774432  234444443333222221111123


Q ss_pred             CeeeHHHHHHHHH-----------HhhcCC-CCCceEEE--eccccCHHHHHHHHHH
Q 020334          228 SMVHIDDVARAHI-----------FLLEYP-DAKGRYIC--SSAKLTIQEMAEFLSA  270 (327)
Q Consensus       228 ~~i~v~D~a~~~~-----------~~~~~~-~~~~~y~~--~~~~~s~~e~~~~i~~  270 (327)
                      +.+.++.+++++.           .+...+ .....|.+  -+..+.+.++.+.+..
T Consensus       233 ~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         233 DMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             hhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence            4444333333332           222211 11123432  3778999999998877

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.95  E-value=3.3e-27  Score=186.54  Aligned_cols=302  Identities=17%  Similarity=0.131  Sum_probs=217.7

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCC-CCcchhhhhhCCCCC--CCCeEEEeCCCCChhHHHHHhc--CCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDP-EHKKDLSFLTNLPGA--SERLQIFNADLNDPESFDAAIA--GCA   80 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~--~~d   80 (327)
                      |..||||-||+=|++|++.|+.+||+|.++.|+++ .+..++.++...|..  ......+.+|++|...+.+++.  +++
T Consensus        29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPt  108 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPT  108 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCch
Confidence            46789999999999999999999999999998643 455666666544433  3457888999999999999987  689


Q ss_pred             EEEEccCCCC--CCCCchHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCCCcccCCCCCChhHhhh
Q 020334           81 GVIHVAAPID--IDGKETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRK  156 (327)
Q Consensus        81 ~vih~a~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~  156 (327)
                      -|+|+|+..+  .+..-++ -..++...|+.+|+++.+..+  ..-+|-..||+..||  .....|-+|.+|.       
T Consensus       109 EiYnLaAQSHVkvSFdlpe-YTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyG--kv~e~PQsE~TPF-------  178 (376)
T KOG1372|consen  109 EVYNLAAQSHVKVSFDLPE-YTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYG--KVQEIPQSETTPF-------  178 (376)
T ss_pred             hhhhhhhhcceEEEeeccc-ceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcc--cccCCCcccCCCC-------
Confidence            9999998765  2333333 456777889999999999775  235899999999995  6677888999874       


Q ss_pred             cCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC-CchHH-HHHHHHhCCcccccccc---CCCeee
Q 020334          157 LDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKF-AGSVR-STLAMVLGNREEYSILL---NISMVH  231 (327)
Q Consensus       157 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~---~~~~i~  231 (327)
                        .|.+||+.+|..+--++..|.+.+++=.|.=-+++--.|..+..+ .+-+. ...+...+....+..+.   .|||.|
T Consensus       179 --yPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGh  256 (376)
T KOG1372|consen  179 --YPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGH  256 (376)
T ss_pred             --CCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccch
Confidence              789999999999888888888877765553333333344443322 11111 12222233333333333   289999


Q ss_pred             HHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCC---CCC----------------CCCCCCCccccccccc
Q 020334          232 IDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHP---EYP----------------IPNVDSLSEIEGYKLS  292 (327)
Q Consensus       232 v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~~~~---~~~----------------~~~~~~~~~~~~~~~~  292 (327)
                      ..|-+++++..+++..+......+++..|++|+++..-..+|   .|.                +.....+-+..+....
T Consensus       257 A~dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~L  336 (376)
T KOG1372|consen  257 AGDYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTL  336 (376)
T ss_pred             hHHHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhh
Confidence            999999999999987665444578999999999998766655   111                0000011111334456


Q ss_pred             ccChHHH-HhccccccccHHHHHHHHHH
Q 020334          293 ALSSKKL-LDICFTYKYGIDEMFDGAIK  319 (327)
Q Consensus       293 ~~d~~k~-~~lg~~p~~~~~~~l~~~~~  319 (327)
                      .-|.+|+ +.|||+|+.++.+.+++|+.
T Consensus       337 qGdasKAk~~LgW~pkv~f~eLVkeMv~  364 (376)
T KOG1372|consen  337 QGDASKAKKTLGWKPKVTFPELVKEMVA  364 (376)
T ss_pred             cCChHHHHHhhCCCCccCHHHHHHHHHH
Confidence            7899999 99999999999999999986

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.7e-25  Score=192.02  Aligned_cols=233  Identities=20%  Similarity=0.131  Sum_probs=164.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      .|++|||||+|+||++++++|+++|++|+++.| ++..   +..+...  ...++.++.+|++|.+++.++++       
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r-~~~~---~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVR-RPDA---LDDLKAR--YGDRLWVLQLDVTDSAAVRAVVDRAFAALG   75 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHh--ccCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999 4322   2222111  02468899999999998877654       


Q ss_pred             CCCEEEEccCCCCCCC-----CchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 GCAGVIHVAAPIDIDG-----KETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 ~~d~vih~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      ++|+||||||......     .....+.+++|+.++.++++++    ++.+ .++||++||......             
T Consensus        76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~-------------  141 (276)
T PRK06482         76 RIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQIA-------------  141 (276)
T ss_pred             CCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccccC-------------
Confidence            4799999998754221     1122377889999999999997    4444 679999999654310             


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCce---ecCCCCCCC-----Cch-HHHHHHHHhC
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFV---VGPFICPKF-----AGS-VRSTLAMVLG  216 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v---~G~~~~~~~-----~~~-~~~~~~~~~~  216 (327)
                               .++.+.|+.+|...|.+++.++++   ++++++++||+.+   ||++.....     ... ...+...+..
T Consensus       142 ---------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (276)
T PRK06482        142 ---------YPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALAD  212 (276)
T ss_pred             ---------CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhh
Confidence                     123457999999999999998866   5899999999988   655432110     011 1112222222


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCC
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~  273 (327)
                      ...       .-+.+++|++++++.++..+..+..||+ ++...+++|+++.+.+.+.
T Consensus       213 ~~~-------~~~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        213 GSF-------AIPGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALE  263 (276)
T ss_pred             ccC-------CCCCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence            111       1246899999999999987766668886 4667888888877766543

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.94  E-value=1.8e-25  Score=192.71  Aligned_cols=202  Identities=21%  Similarity=0.224  Sum_probs=145.6

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHh------cC-C
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAI------AG-C   79 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~------~~-~   79 (327)
                      +||||||||++|++++++|+++|++|++++| ++....           ..+++.+.+|+.|++++.+++      .+ +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R-~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~   68 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASR-SSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEI   68 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeC-CCcccc-----------CCCCccccccCCCHHHHHHHHhcccCcCCce
Confidence            5999999999999999999999999999999 543321           135677889999999999988      56 9


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |.|+|+++...    .   .     .....++++++++.+ +++||++||..++. +                      .
T Consensus        69 d~v~~~~~~~~----~---~-----~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~-~----------------------~  112 (285)
T TIGR03649        69 SAVYLVAPPIP----D---L-----APPMIKFIDFARSKG-VRRFVLLSASIIEK-G----------------------G  112 (285)
T ss_pred             eEEEEeCCCCC----C---h-----hHHHHHHHHHHHHcC-CCEEEEeeccccCC-C----------------------C
Confidence            99999987432    1   1     123568899999998 99999999865431 0                      0


Q ss_pred             CchhhHhhhHHHHHHHHHHHHH-cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc-ccccc-ccCCCeeeHHHHH
Q 020334          160 WGKSYVLTKTLTERAALEFAEE-HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR-EEYSI-LLNISMVHIDDVA  236 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~i~v~D~a  236 (327)
                            ..+...|.++    ++ .+++++++||+.+|++.....   ..    ..+.... ...+. .+.++|+|++|+|
T Consensus       113 ------~~~~~~~~~l----~~~~gi~~tilRp~~f~~~~~~~~---~~----~~~~~~~~~~~~~g~~~~~~v~~~Dva  175 (285)
T TIGR03649       113 ------PAMGQVHAHL----DSLGGVEYTVLRPTWFMENFSEEF---HV----EAIRKENKIYSATGDGKIPFVSADDIA  175 (285)
T ss_pred             ------chHHHHHHHH----HhccCCCEEEEeccHHhhhhcccc---cc----cccccCCeEEecCCCCccCcccHHHHH
Confidence                  0112233333    33 489999999999886532110   00    1111222 22222 2337999999999


Q ss_pred             HHHHHhhcCCCC-CceEEE-eccccCHHHHHHHHHHhCC
Q 020334          237 RAHIFLLEYPDA-KGRYIC-SSAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       237 ~~~~~~~~~~~~-~~~y~~-~~~~~s~~e~~~~i~~~~~  273 (327)
                      ++++.++..+.. ++.|++ +++.+|++|+++.+.+.+|
T Consensus       176 ~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g  214 (285)
T TIGR03649       176 RVAYRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLG  214 (285)
T ss_pred             HHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhC
Confidence            999999987643 467875 5688999999999999888

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.94  E-value=6.9e-25  Score=226.06  Aligned_cols=258  Identities=21%  Similarity=0.206  Sum_probs=179.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC----CeEEEEEcCCCCCcchhhhhhC--------CCCCCCCeEEEeCCCCC----
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG----YFVTTTVRSDPEHKKDLSFLTN--------LPGASERLQIFNADLND----   68 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~~~~~D~~d----   68 (327)
                      .++|||||||||||++++++|++++    ++|+++.| ..........+..        ......+++++.+|+.+    
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R-~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVR-AKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEEC-cCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            4789999999999999999999876    88999999 4322222222110        00012368999999974    


Q ss_pred             --hhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCC--------
Q 020334           69 --PESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGK--------  138 (327)
Q Consensus        69 --~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~--------  138 (327)
                        .+.+.++..++|+|||+|+...+.  .+...+...|+.++.++++++++.+ +++|+|+||.++|+....        
T Consensus      1050 l~~~~~~~l~~~~d~iiH~Aa~~~~~--~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~~~~~~~~~~~~~~ 1126 (1389)
T TIGR03443      1050 LSDEKWSDLTNEVDVIIHNGALVHWV--YPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSALDTEYYVNLSDELV 1126 (1389)
T ss_pred             cCHHHHHHHHhcCCEEEECCcEecCc--cCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeecCcccccchhhhhh
Confidence              456677777899999999987643  3343566789999999999999877 889999999999852110        


Q ss_pred             --CCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC--CchHHHHHHHH
Q 020334          139 --DVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKF--AGSVRSTLAMV  214 (327)
Q Consensus       139 --~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~--~~~~~~~~~~~  214 (327)
                        ....++|+.+...    ....+.+.|+.||+.+|.++..+.+ .|++++++||+.|||+...+..  ..++..++...
T Consensus      1127 ~~~~~~~~e~~~~~~----~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~ 1201 (1389)
T TIGR03443      1127 QAGGAGIPESDDLMG----SSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGC 1201 (1389)
T ss_pred             hccCCCCCccccccc----ccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHH
Confidence              1112344432111    1123356799999999999998766 4999999999999999754421  23333333322


Q ss_pred             hCCccccccccCCCeeeHHHHHHHHHHhhcCCCC---CceEEEe-ccccCHHHHHHHHHHh
Q 020334          215 LGNREEYSILLNISMVHIDDVARAHIFLLEYPDA---KGRYICS-SAKLTIQEMAEFLSAK  271 (327)
Q Consensus       215 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~y~~~-~~~~s~~e~~~~i~~~  271 (327)
                      ...+......+.++|++++|++++++.++.++..   ..+||+. +..+++.++++.+.+.
T Consensus      1202 ~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443      1202 IQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY 1262 (1389)
T ss_pred             HHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh
Confidence            2222111223348999999999999999876532   2378875 5579999999999764

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.93  E-value=9.5e-25  Score=185.95  Aligned_cols=221  Identities=18%  Similarity=0.210  Sum_probs=152.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++++|||||+|+||+++++.|+++|++|++++| ++.... ....+...   ..++.++.+|++|.+.+.++++      
T Consensus         7 ~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (262)
T PRK13394          7 GKTAVVTGAASGIGKEIALELARAGAAVAIADL-NQDGANAVADEINKA---GGKAIGVAMDVTNEDAVNAGIDKVAERF   82 (262)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHhc---CceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999 443222 22222221   2457889999999998877664      


Q ss_pred             -CCCEEEEccCCCCCC-----CCchHHHHHHHHHhH----HHHHHHHH-HhcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDID-----GKETEEVMTQRAVNG----TIGILKSC-LKSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~----~~~l~~~~-~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|+|||||+.....     ..+.....+++|+.+    +.++++.+ +..+ .++||++||...+. +          
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~-~----------  150 (262)
T PRK13394         83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHE-A----------  150 (262)
T ss_pred             CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcC-C----------
Confidence             489999999865321     112223678899998    66677777 5544 78999999965432 0          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCch-------HHHHHHHHhC
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGS-------VRSTLAMVLG  216 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~-------~~~~~~~~~~  216 (327)
                                 .++.+.|+.+|...+.+++.++++   .+++++++||+.+++|......+..       .......+..
T Consensus       151 -----------~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (262)
T PRK13394        151 -----------SPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVML  219 (262)
T ss_pred             -----------CCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHh
Confidence                       122456999999999999888776   3899999999999998633211110       0011111111


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYPDA---KGRYICSSA  257 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  257 (327)
                      ...     ..++|++++|++++++.+++....   +..|+++++
T Consensus       220 ~~~-----~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g  258 (262)
T PRK13394        220 GKT-----VDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHG  258 (262)
T ss_pred             cCC-----CCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCc
Confidence            111     125899999999999999986432   345666543

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.93  E-value=1.6e-24  Score=174.87  Aligned_cols=275  Identities=17%  Similarity=0.171  Sum_probs=197.6

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEccC
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHVAA   87 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~a~   87 (327)
                      +-|.|||||+|.+++.+|.+.|-+|++--|.++.....++-+-+    .+.+-+...|+.|++++++.++..++|||+.|
T Consensus        64 aTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd----LGQvl~~~fd~~DedSIr~vvk~sNVVINLIG  139 (391)
T KOG2865|consen   64 ATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD----LGQVLFMKFDLRDEDSIRAVVKHSNVVINLIG  139 (391)
T ss_pred             EEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc----ccceeeeccCCCCHHHHHHHHHhCcEEEEeec
Confidence            55999999999999999999999999999966544444433322    26788999999999999999999999999998


Q ss_pred             CCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhh
Q 020334           88 PIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLT  167 (327)
Q Consensus        88 ~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~s  167 (327)
                      .-  .+.... .+.++|+.++..|++.|++.| +.+|||+|+-..-                        -...+-|-.+
T Consensus       140 rd--~eTknf-~f~Dvn~~~aerlAricke~G-VerfIhvS~Lgan------------------------v~s~Sr~Lrs  191 (391)
T KOG2865|consen  140 RD--YETKNF-SFEDVNVHIAERLARICKEAG-VERFIHVSCLGAN------------------------VKSPSRMLRS  191 (391)
T ss_pred             cc--cccCCc-ccccccchHHHHHHHHHHhhC-hhheeehhhcccc------------------------ccChHHHHHh
Confidence            52  222333 678999999999999999999 9999999985421                        1224569999


Q ss_pred             hHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc-cccccccC---CCeeeHHHHHHHHHHhh
Q 020334          168 KTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR-EEYSILLN---ISMVHIDDVARAHIFLL  243 (327)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~i~v~D~a~~~~~~~  243 (327)
                      |.++|..+++...    ..+|+||+.+||..++     ++..+...++..+ .++...|.   -..+||-|+|.+|+.++
T Consensus       192 K~~gE~aVrdafP----eAtIirPa~iyG~eDr-----fln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAv  262 (391)
T KOG2865|consen  192 KAAGEEAVRDAFP----EATIIRPADIYGTEDR-----FLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAV  262 (391)
T ss_pred             hhhhHHHHHhhCC----cceeechhhhcccchh-----HHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhc
Confidence            9999999987653    4799999999998744     3333322222222 23333332   47999999999999999


Q ss_pred             cCCCCCc-eEE-EeccccCHHHHHHHHHHhCC------CCCCCCC--------------CCCccc-------cccccccc
Q 020334          244 EYPDAKG-RYI-CSSAKLTIQEMAEFLSAKHP------EYPIPNV--------------DSLSEI-------EGYKLSAL  294 (327)
Q Consensus       244 ~~~~~~~-~y~-~~~~~~s~~e~~~~i~~~~~------~~~~~~~--------------~~~~~~-------~~~~~~~~  294 (327)
                      .++.+.| +|- +++....+.|+++.+-+...      ..+.|.+              ....++       ....+..+
T Consensus       263 kDp~s~Gktye~vGP~~yql~eLvd~my~~~~~~~ry~r~~mP~f~a~a~~~~f~~~pf~~~~pln~d~ie~~~v~~~vl  342 (391)
T KOG2865|consen  263 KDPDSMGKTYEFVGPDRYQLSELVDIMYDMAREWPRYVRLPMPIFKAMAAARDFMIVPFPPPSPLNRDQIERLTVTDLVL  342 (391)
T ss_pred             cCccccCceeeecCCchhhHHHHHHHHHHHHhhccccccCCcHHHHHHHhhhheeecCCCCCCCCCHHHhhheeehhhhc
Confidence            9987766 785 67788999999999866322      1122211              011111       11233344


Q ss_pred             ChHHH-HhccccccccHHHHHHHHHHHHHHc
Q 020334          295 SSKKL-LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       295 d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      +...- .+||..++ +++....+.+..|+.-
T Consensus       343 t~~~tleDLgv~~t-~le~~~~e~l~~yR~~  372 (391)
T KOG2865|consen  343 TGAPTLEDLGVVLT-KLELYPVEFLRQYRKG  372 (391)
T ss_pred             CCCCcHhhcCceee-ecccccHHHHHHHhhc
Confidence            44443 88999988 8888777777666543

>PRK09135 pteridine reductase; Provisional

Probab=99.93  E-value=7.4e-24  Score=179.04  Aligned_cols=224  Identities=17%  Similarity=0.131  Sum_probs=150.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhh-hhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLS-FLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +.++||||||+|+||++++++|+++|++|++++|+.......+. .+....  ...+.++.+|++|.+++.++++     
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR--PGSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc--CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999984332222211 111110  1357889999999998887765     


Q ss_pred             --CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 --GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 --~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                        ++|+|||+||.....     ........++.|+.++.++++++.+.-  ....++++||....             .+
T Consensus        83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------------~~  149 (249)
T PRK09135         83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE-------------RP  149 (249)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc-------------CC
Confidence              479999999864311     112224788999999999999987531  12456655542211             11


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                               .++.+.|+.+|..+|.+++.+++++  +++++++||+.++||.....+....   ........ .+.    
T Consensus       150 ---------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~---~~~~~~~~-~~~----  212 (249)
T PRK09135        150 ---------LKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEA---RQAILART-PLK----  212 (249)
T ss_pred             ---------CCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHH---HHHHHhcC-CcC----
Confidence                     2445689999999999999998775  6999999999999998543222221   11111111 111    


Q ss_pred             CCeeeHHHHHHHHHHhhcCCC--CCceEEEe-ccccC
Q 020334          227 ISMVHIDDVARAHIFLLEYPD--AKGRYICS-SAKLT  260 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~~--~~~~y~~~-~~~~s  260 (327)
                       .+.+++|+++++..++....  .+.+||++ +..++
T Consensus       213 -~~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        213 -RIGTPEDIAEAVRFLLADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             -CCcCHHHHHHHHHHHcCccccccCcEEEECCCeecc
Confidence             34468999999977765422  34578875 44433

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.92  E-value=4.2e-24  Score=171.99  Aligned_cols=183  Identities=32%  Similarity=0.414  Sum_probs=139.4

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEccC
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHVAA   87 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~a~   87 (327)
                      |+|+||||++|++++++|+++|++|+++.| ++.+...          ..+++++.+|+.|++++.+.+.++|+|||+++
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R-~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~   69 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVR-SPSKAED----------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAG   69 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEES-SGGGHHH----------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEec-Cchhccc----------ccccccceeeehhhhhhhhhhhhcchhhhhhh
Confidence            799999999999999999999999999999 4443322          26899999999999999999999999999997


Q ss_pred             CCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhh
Q 020334           88 PIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLT  167 (327)
Q Consensus        88 ~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~s  167 (327)
                      ....            +...+.++++++++.+ ++++|++||..+|.  ........+..           .....|...
T Consensus        70 ~~~~------------~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~--~~~~~~~~~~~-----------~~~~~~~~~  123 (183)
T PF13460_consen   70 PPPK------------DVDAAKNIIEAAKKAG-VKRVVYLSSAGVYR--DPPGLFSDEDK-----------PIFPEYARD  123 (183)
T ss_dssp             STTT------------HHHHHHHHHHHHHHTT-SSEEEEEEETTGTT--TCTSEEEGGTC-----------GGGHHHHHH
T ss_pred             hhcc------------cccccccccccccccc-cccceeeeccccCC--CCCcccccccc-----------cchhhhHHH
Confidence            5332            1667899999999998 99999999999874  22111112121           112468888


Q ss_pred             hHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcC
Q 020334          168 KTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                      |..+|+.++    +.+++++++||+.+||+....  ...+..            ......++|+++|+|++++.++++
T Consensus       124 ~~~~e~~~~----~~~~~~~ivrp~~~~~~~~~~--~~~~~~------------~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  124 KREAEEALR----ESGLNWTIVRPGWIYGNPSRS--YRLIKE------------GGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             HHHHHHHHH----HSTSEEEEEEESEEEBTTSSS--EEEESS------------TSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHH----hcCCCEEEEECcEeEeCCCcc--eeEEec------------cCCCCcCcCCHHHHHHHHHHHhCC
Confidence            988888774    368999999999999996331  111100            111124899999999999998864

...

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=1.4e-23  Score=177.27  Aligned_cols=221  Identities=19%  Similarity=0.156  Sum_probs=155.0

Q ss_pred             CCCC-CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQ-KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~-~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |..| +++||||||||+||++++++|+++|++|+++.|++......+.....  ....++.++.+|+.|++.+.++++  
T Consensus         1 ~~~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~   78 (249)
T PRK12825          1 MGSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVE--ALGRRAQAVQADVTDKAALEAAVAAA   78 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHH--hcCCceEEEECCcCCHHHHHHHHHHH
Confidence            4443 46899999999999999999999999998878743322222211111  112468899999999998877664  


Q ss_pred             -----CCCEEEEccCCCCCCC-----CchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 -----GCAGVIHVAAPIDIDG-----KETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 -----~~d~vih~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                           ++|+|||+||......     .....+.++.|+.++.++++.+.    +.+ .++||++||...+...       
T Consensus        79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~~-------  150 (249)
T PRK12825         79 VERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPGW-------  150 (249)
T ss_pred             HHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCCC-------
Confidence                 5799999998543211     12224778999999999988874    444 7899999998766311       


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                     .....|+.+|...+.+++.++++   .+++++++||+.++|+.........   ....  .....
T Consensus       151 ---------------~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~---~~~~--~~~~~  210 (249)
T PRK12825        151 ---------------PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEA---REAK--DAETP  210 (249)
T ss_pred             ---------------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchh---HHhh--hccCC
Confidence                           22456999999999999888765   4899999999999998754322111   1111  00111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEec
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSS  256 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~  256 (327)
                      +     ..+++++|+++++.++++...   .+.+|++++
T Consensus       211 ~-----~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~  244 (249)
T PRK12825        211 L-----GRSGTPEDIARAVAFLCSDASDYITGQVIEVTG  244 (249)
T ss_pred             C-----CCCcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence            1     258999999999999997643   244677654

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.7e-23  Score=179.52  Aligned_cols=224  Identities=17%  Similarity=0.085  Sum_probs=152.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +++||||||+|+||++++++|+++|++|++++| ++.....   +...  ...++..+.+|++|.+++.++++       
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~---l~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVR-SEAARAD---FEAL--HPDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeC-CHHHHHH---HHhh--cCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999 4433222   2111  12467889999999998877665       


Q ss_pred             CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 ~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      ++|+|||+||.....     ..+...+.+++|+.++.++++++.+    .+ .+++|++||...+...            
T Consensus        78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~~------------  144 (277)
T PRK06180         78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLITM------------  144 (277)
T ss_pred             CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCCC------------
Confidence            479999999875421     1112236689999999999998543    33 5699999997655311            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC---chHHHHHHHHhCCccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFA---GSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~  222 (327)
                                ++...|+.+|...|.+++.++.+   .|++++++||+.+.++.......   ..................
T Consensus       145 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (277)
T PRK06180        145 ----------PGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQARE  214 (277)
T ss_pred             ----------CCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHH
Confidence                      23457999999999999888765   48999999999998875322111   111111100000000000


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCCCCceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPDAKGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~  257 (327)
                      ......+..++|+|++++.+++.+.....|..+.+
T Consensus       215 ~~~~~~~~~~~dva~~~~~~l~~~~~~~~~~~g~~  249 (277)
T PRK06180        215 AKSGKQPGDPAKAAQAILAAVESDEPPLHLLLGSD  249 (277)
T ss_pred             hhccCCCCCHHHHHHHHHHHHcCCCCCeeEeccHH
Confidence            01112467899999999999998766555654433

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.92  E-value=1.2e-23  Score=178.00  Aligned_cols=219  Identities=17%  Similarity=0.120  Sum_probs=155.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++||||||+|+||.+++++|+++|++|++++| ++.... ....+...   ..++.++.+|+.|++++.++++      
T Consensus         6 ~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12826          6 GRVALVTGAARGIGRAIAVRLAADGAEVIVVDI-CGDDAAATAELVEAA---GGKARARQVDVRDRAALKAAVAAGVEDF   81 (251)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999 432222 12222211   2358889999999998888775      


Q ss_pred             -CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 -GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 -~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                       .+|+|||+++.....     ..+...+.++.|+.++.++++++.    +.+ .++||++||...+...           
T Consensus        82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~~-----------  149 (251)
T PRK12826         82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRVG-----------  149 (251)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhccC-----------
Confidence             589999999875421     112224778999999999998874    334 6799999997654100           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                ..+...|+.+|...+.+++.++.+   .+++++++||+.++||.........+.   .... ...++.  
T Consensus       150 ----------~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~---~~~~-~~~~~~--  213 (251)
T PRK12826        150 ----------YPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWA---EAIA-AAIPLG--  213 (251)
T ss_pred             ----------CCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHH---HHHH-hcCCCC--
Confidence                      122457999999999999988765   389999999999999965432222111   1111 111111  


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCC---CCceEEEeccc
Q 020334          225 LNISMVHIDDVARAHIFLLEYPD---AKGRYICSSAK  258 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~~  258 (327)
                         .+++++|++.++..++....   .+.+|++.++.
T Consensus       214 ---~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        214 ---RLGEPEDIAAAVLFLASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             ---CCcCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence               58999999999999887643   34567776543

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.9e-23  Score=177.98  Aligned_cols=234  Identities=16%  Similarity=0.081  Sum_probs=162.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +++||||||+|+||++++++|+++|++|++++| ++.....+....     ...+.++.+|++|++++.+++.       
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATAR-DTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            678999999999999999999999999999999 432222111110     2467888999999988876654       


Q ss_pred             CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 ~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      ++|+||||||.....     ..+...+.+++|+.++..+++.+    ++.+ .+++|++||...+...            
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~------------  143 (275)
T PRK08263         77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISAF------------  143 (275)
T ss_pred             CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCCC------------
Confidence            579999999865421     11223488999999987777765    4444 6799999997766311            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC--chHHHHHHHHhCCcccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFA--GSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~  223 (327)
                                +..+.|+.+|...+.+++.++.+   .|++++++||+.+.++.......  ............   ....
T Consensus       144 ----------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~---~~~~  210 (275)
T PRK08263        144 ----------PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREE---LAEQ  210 (275)
T ss_pred             ----------CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHH---HHHH
Confidence                      22346999999999999888765   58999999999998775421110  001000000000   0000


Q ss_pred             ccCCCe-eeHHHHHHHHHHhhcCCCCCceEEE-e-ccccCHHHHHHHHHH
Q 020334          224 LLNISM-VHIDDVARAHIFLLEYPDAKGRYIC-S-SAKLTIQEMAEFLSA  270 (327)
Q Consensus       224 ~~~~~~-i~v~D~a~~~~~~~~~~~~~~~y~~-~-~~~~s~~e~~~~i~~  270 (327)
                      .....+ +.++|++++++.+++.+...+.|++ + ++.+++.++.+.+.+
T Consensus       211 ~~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (275)
T PRK08263        211 WSERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLAT  260 (275)
T ss_pred             HHhccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHH
Confidence            011245 8999999999999998776666654 3 357899999888876

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3e-23  Score=177.70  Aligned_cols=220  Identities=17%  Similarity=0.142  Sum_probs=151.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++++||||+|+||++++++|+++|++|++++| +....... ..+...   ..++.++.+|++|.+++.++++      
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGFPVALGAR-RVEKCEELVDKIRAD---GGEAVAFPLDVTDPDSVKSFVAQAEEAL   85 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            468999999999999999999999999999998 43222211 112111   2367888999999998887665      


Q ss_pred             -CCCEEEEccCCCCCCC-----CchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 -GCAGVIHVAAPIDIDG-----KETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 -~~d~vih~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                       ++|+|||+||......     .+...+.++.|+.++.++++.+.+    .+ ..+||++||...+...           
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~~~-----------  153 (274)
T PRK07775         86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALRQR-----------  153 (274)
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcCCC-----------
Confidence             5799999998654211     112236689999999999888653    23 5689999998766311           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                 ++...|+.+|...|.+++.++++.   |++++++|||.+.++.........+.........    ....
T Consensus       154 -----------~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~----~~~~  218 (274)
T PRK07775        154 -----------PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAK----WGQA  218 (274)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHH----hccc
Confidence                       223469999999999999988764   8999999999886653211111111111111110    0111


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCCCCceEEEe
Q 020334          225 LNISMVHIDDVARAHIFLLEYPDAKGRYICS  255 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~  255 (327)
                      ..+.++|++|+|++++.+++++..+.+||+.
T Consensus       219 ~~~~~~~~~dva~a~~~~~~~~~~~~~~~~~  249 (274)
T PRK07775        219 RHDYFLRASDLARAITFVAETPRGAHVVNME  249 (274)
T ss_pred             ccccccCHHHHHHHHHHHhcCCCCCCeeEEe
Confidence            1246999999999999999886544577764

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.4e-23  Score=177.05  Aligned_cols=235  Identities=21%  Similarity=0.210  Sum_probs=162.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++++|||||+|+||+++++.|+++|++|++++| ++... .....+.... ...++.++.+|+.|++++.++++      
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGR-NPDKLAAAAEEIEALK-GAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHHhcc-CCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            589999999999999999999999999999999 43222 1122222111 12467889999999998877665      


Q ss_pred             -CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHHhcC---CccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCLKSG---TVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|+|||+||....       +.+.+ ...++.|+.++..+++++.+..   ...+|+++||...+..           
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------  152 (276)
T PRK05875         85 GRLHGVVHCAGGSETIGPITQIDSDAW-RRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT-----------  152 (276)
T ss_pred             CCCCEEEECCCcccCCCChhhCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCC-----------
Confidence             68999999985321       11122 3678899999999988765431   1458999999776521           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .++.++|+.+|...|.+++.++.++   +++++++||+.+.++.........  ........ ..+.  
T Consensus       153 -----------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~--~~~~~~~~-~~~~--  216 (276)
T PRK05875        153 -----------HRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESP--ELSADYRA-CTPL--  216 (276)
T ss_pred             -----------CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCH--HHHHHHHc-CCCC--
Confidence                       1234579999999999999988765   699999999999877532211110  11111111 1111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCCC---CceEEEe-cccc----CHHHHHHHHHHhC
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPDA---KGRYICS-SAKL----TIQEMAEFLSAKH  272 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~~---~~~y~~~-~~~~----s~~e~~~~i~~~~  272 (327)
                         ..+++++|+++++.++++.+..   +.+|++. +..+    +..|+++.+.+..
T Consensus       217 ---~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~  270 (276)
T PRK05875        217 ---PRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGAD  270 (276)
T ss_pred             ---CCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHH
Confidence               2578899999999999987543   4467764 4444    7888887776543

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.92  E-value=1.6e-23  Score=177.90  Aligned_cols=221  Identities=18%  Similarity=0.178  Sum_probs=150.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++||||||+|+||++++++|+++|++|++++| ++...... ..+...   ..++.++.+|+.|++++.++++      
T Consensus         4 ~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (258)
T PRK12429          4 GKVALVTGAASGIGLEIALALAKEGAKVVIADL-NDEAAAAAAEALQKA---GGKAIGVAMDVTDEEAINAGIDYAVETF   79 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999 44332222 222211   2468899999999998877665      


Q ss_pred             -CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHH----HHHHhcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 -GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGIL----KSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 -~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~----~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                       .+|+|||+|+.....     ........++.|+.++..++    ..+++.+ .++||++||...+...           
T Consensus        80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~-----------  147 (258)
T PRK12429         80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVGS-----------  147 (258)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccCC-----------
Confidence             589999999864421     11122356788998855554    4455555 7899999997655311           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCch-------HHHHHHHHhCC
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGS-------VRSTLAMVLGN  217 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~-------~~~~~~~~~~~  217 (327)
                                 .+.+.|+.+|...+.+++.++.+.   +++++++||+.+++|.........       .......... 
T Consensus       148 -----------~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  215 (258)
T PRK12429        148 -----------AGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLL-  215 (258)
T ss_pred             -----------CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHh-
Confidence                       224579999999999988887653   799999999999998643211100       0000000000 


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYPDA---KGRYICSSA  257 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  257 (327)
                          .....+.+++++|+|+++.+++.....   +..|+++++
T Consensus       216 ----~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        216 ----PLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             ----ccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence                011125799999999999999876432   345666554

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.2e-23  Score=179.30  Aligned_cols=229  Identities=19%  Similarity=0.139  Sum_probs=154.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      ++++|||||+|+||+++++.|+++|++|++++| ++.....+...........+++++.+|++|++++.+ ++       
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMR-NPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeC-CHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            678999999999999999999999999999999 443332222211111112468899999999988765 32       


Q ss_pred             CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 ~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      ++|+||||||.....     ......+.+++|+.++.++++.+    ++.+ .++||++||...+. +            
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~-~------------  146 (280)
T PRK06914         81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRV-G------------  146 (280)
T ss_pred             CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccC-C------------
Confidence            579999999864421     11222367889999988888875    4444 67999999965432 1            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHH---HcCCcEEEEecCceecCCCCCCCC---------chHHHHHHHHhC
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAE---EHGLDLVTLIPSFVVGPFICPKFA---------GSVRSTLAMVLG  216 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~i~R~~~v~G~~~~~~~~---------~~~~~~~~~~~~  216 (327)
                               ..+.+.|+.+|...+.+++.++.   ..+++++++|||.++++.......         ............
T Consensus       147 ---------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (280)
T PRK06914        147 ---------FPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQK  217 (280)
T ss_pred             ---------CCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHH
Confidence                     12345799999999999988863   358999999999999884221100         000111111100


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHH
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYICS-SAKLTIQ  262 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~  262 (327)
                      ..    ......+++++|+|++++.+++++.....|+++ +..+++.
T Consensus       218 ~~----~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (280)
T PRK06914        218 HI----NSGSDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMIL  260 (280)
T ss_pred             HH----hhhhhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHHH
Confidence            00    011135789999999999999998766667764 4455443

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.92  E-value=2.5e-23  Score=175.90  Aligned_cols=228  Identities=20%  Similarity=0.225  Sum_probs=156.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCC-hhHHHHHh-cCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLND-PESFDAAI-AGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~-~~~d~   81 (327)
                      .+|+||||||||+||++++++|+++|++|+++.| ++.....   ...   ...+++++.+|++| .+.+.+.+ .++|+
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~---~~~---~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~   88 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVR-DVDKAKT---SLP---QDPSLQIVRADVTEGSDKLVEAIGDDSDA   88 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEec-CHHHHHH---hcc---cCCceEEEEeeCCCCHHHHHHHhhcCCCE
Confidence            3679999999999999999999999999999999 4332211   111   02368999999998 46677777 68999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      |||+++.....  ... ..++.|..++.++++++++.+ +++||++||.++|+.  ....+..+...    .    ..+.
T Consensus        89 vi~~~g~~~~~--~~~-~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~--~~~~~~~~~~~----~----~~~~  154 (251)
T PLN00141         89 VICATGFRRSF--DPF-APWKVDNFGTVNLVEACRKAG-VTRFILVSSILVNGA--AMGQILNPAYI----F----LNLF  154 (251)
T ss_pred             EEECCCCCcCC--CCC-CceeeehHHHHHHHHHHHHcC-CCEEEEEccccccCC--CcccccCcchh----H----HHHH
Confidence            99998853211  112 335678889999999999887 899999999998852  11222211110    0    0112


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHH
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIF  241 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  241 (327)
                      ..|...|..+|++++    +.+++++++||+.++++.....   ..      ........     ..+|+.+|+|++++.
T Consensus       155 ~~~~~~k~~~e~~l~----~~gi~~~iirpg~~~~~~~~~~---~~------~~~~~~~~-----~~~i~~~dvA~~~~~  216 (251)
T PLN00141        155 GLTLVAKLQAEKYIR----KSGINYTIVRPGGLTNDPPTGN---IV------MEPEDTLY-----EGSISRDQVAEVAVE  216 (251)
T ss_pred             HHHHHHHHHHHHHHH----hcCCcEEEEECCCccCCCCCce---EE------ECCCCccc-----cCcccHHHHHHHHHH
Confidence            234556888877664    3689999999999998642211   00      00000011     258999999999999


Q ss_pred             hhcCCCC-CceEEE-e---ccccCHHHHHHHHHH
Q 020334          242 LLEYPDA-KGRYIC-S---SAKLTIQEMAEFLSA  270 (327)
Q Consensus       242 ~~~~~~~-~~~y~~-~---~~~~s~~e~~~~i~~  270 (327)
                      ++..+.. ..++.+ +   +...++++++..+++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        217 ALLCPESSYKVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             HhcChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence            9988765 345643 2   234899999988875

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.9e-23  Score=176.54  Aligned_cols=230  Identities=17%  Similarity=0.165  Sum_probs=154.8

Q ss_pred             CCCC-CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-
Q 020334            1 MEEQ-KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-   77 (327)
Q Consensus         1 m~~~-~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-   77 (327)
                      |..| .+++|||||+|+||.+++++|+++|++|++++|+.......+ ..+...   ..++.++.+|++|++++.++++ 
T Consensus         1 ~~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~   77 (248)
T PRK07806          1 MGDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA---GGRASAVGADLTDEESVAALMDT   77 (248)
T ss_pred             CCCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHHHHH
Confidence            4433 488999999999999999999999999999999432222211 112211   2467889999999998877664 


Q ss_pred             ------CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           78 ------GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        78 ------~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                            ++|+|||+|+........+. ..+++|+.++.++++++.+.- ...++|++||.......      ..+..   
T Consensus        78 ~~~~~~~~d~vi~~ag~~~~~~~~~~-~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~------~~~~~---  147 (248)
T PRK07806         78 AREEFGGLDALVLNASGGMESGMDED-YAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIP------TVKTM---  147 (248)
T ss_pred             HHHhCCCCcEEEECCCCCCCCCCCcc-eeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCc------cccCC---
Confidence                  58999999986433222333 678899999999999998652 13589999995432101      00111   


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCC
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNI  227 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (327)
                              +...+|+.+|..+|.+++.++.+   .++++++++|+.+-++...............   ....+.     .
T Consensus       148 --------~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~  211 (248)
T PRK07806        148 --------PEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIE---ARREAA-----G  211 (248)
T ss_pred             --------ccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHH---HHHhhh-----c
Confidence                    11457999999999999998765   4899999999877665321100000000000   000111     2


Q ss_pred             CeeeHHHHHHHHHHhhcCCCCCc-eEEEecccc
Q 020334          228 SMVHIDDVARAHIFLLEYPDAKG-RYICSSAKL  259 (327)
Q Consensus       228 ~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~~~  259 (327)
                      .+++++|++++++.+++.....| +|++++...
T Consensus       212 ~~~~~~dva~~~~~l~~~~~~~g~~~~i~~~~~  244 (248)
T PRK07806        212 KLYTVSEFAAEVARAVTAPVPSGHIEYVGGADY  244 (248)
T ss_pred             ccCCHHHHHHHHHHHhhccccCccEEEecCccc
Confidence            79999999999999998765444 678766543

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.91  E-value=8.3e-23  Score=173.50  Aligned_cols=230  Identities=20%  Similarity=0.138  Sum_probs=159.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      |++++|||||+|+||.+++++|+++|++|++++| ++.....+ ..+.     ..++.++.+|+.|.+++..++.     
T Consensus         1 ~~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r-~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (257)
T PRK07074          1 TKRTALVTGAAGGIGQALARRFLAAGDRVLALDI-DAAALAAFADALG-----DARFVPVACDLTDAASLAAALANAAAE   74 (257)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 43332222 1111     2467889999999998877664     


Q ss_pred             --CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 --GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 --~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                        ++|+|||++|.....     ..+.....+.+|+.++..+++++..    .+ .++||++||...+. .          
T Consensus        75 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~-~----------  142 (257)
T PRK07074         75 RGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMA-A----------  142 (257)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcC-C----------
Confidence              489999999864321     1111225577899999888887743    33 57899999964331 0          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                  .....|+.+|...+.+++.+++++   +++++.+||+.++++......... ..+...... ...   
T Consensus       143 ------------~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~~~~~~~~~-~~~---  205 (257)
T PRK07074        143 ------------LGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAAN-PQVFEELKK-WYP---  205 (257)
T ss_pred             ------------CCCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccC-hHHHHHHHh-cCC---
Confidence                        001259999999999999988665   799999999999988532211111 111111111 111   


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEe-ccccCHHHHHHHHHH
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD--AKG-RYICS-SAKLTIQEMAEFLSA  270 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~-~~~~s~~e~~~~i~~  270 (327)
                        .+++++++|++++++.++....  ..| .+++. +...+.+|+.+.+..
T Consensus       206 --~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        206 --LQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             --CCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence              1379999999999999997532  234 45564 567889999988754

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7.2e-23  Score=173.14  Aligned_cols=215  Identities=18%  Similarity=0.132  Sum_probs=152.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      ++++++||||+|+||.+++++|+++|++|++++| +......+ ..+...   ..++.++.+|++|.+++..+++     
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADI-NAEGAERVAKQIVAD---GGTAIAVQVDVSDPDSAKAMADATVSA   80 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999 43222222 222211   2357788999999988776554     


Q ss_pred             --CCCEEEEccCCCCC------C--CCchHHHHHHHHHhHHHHHHHHHHhcC---CccEEEEeccceeeeecCCCCCccc
Q 020334           78 --GCAGVIHVAAPIDI------D--GKETEEVMTQRAVNGTIGILKSCLKSG---TVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~--~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        .+|+|||+||....      .  ..+...+.+++|+.++.++++++.+.-   ..++||++||...+.          
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------  150 (250)
T PRK07774         81 FGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL----------  150 (250)
T ss_pred             hCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC----------
Confidence              57999999996421      0  112223678899999999988887541   146999999987662          


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                     +.+.|+.+|...|.+++.+++++   ++++++++|+.+..+......+..+..  ......+  .
T Consensus       151 ---------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~--~~~~~~~--~  211 (250)
T PRK07774        151 ---------------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVA--DMVKGIP--L  211 (250)
T ss_pred             ---------------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHH--HHHhcCC--C
Confidence                           13469999999999999998764   799999999999887644322221111  1111111  1


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEec
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSS  256 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~  256 (327)
                      .     .+..++|++++++.++....   .+.+|++.+
T Consensus       212 ~-----~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~  244 (250)
T PRK07774        212 S-----RMGTPEDLVGMCLFLLSDEASWITGQIFNVDG  244 (250)
T ss_pred             C-----CCcCHHHHHHHHHHHhChhhhCcCCCEEEECC
Confidence            1     36689999999999987642   345777654

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.91  E-value=5.8e-23  Score=174.24  Aligned_cols=221  Identities=17%  Similarity=0.197  Sum_probs=149.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhh-hhCCCCCCCCeEEEeCCCCChhHHHHHh-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSF-LTNLPGASERLQIFNADLNDPESFDAAI-------   76 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~-------   76 (327)
                      ++++|||||+|+||++++++|+++|++|++++| ++.....+.. +...   ..++.++.+|+.|++++..++       
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDL-GEAGAEAAAKVATDA---GGSVIYLVADVTKEDEIADMIAAAAAEF   76 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            368999999999999999999999999999999 4333222221 1111   246888999999999665544       


Q ss_pred             cCCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           77 AGCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        77 ~~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      .++|+|||+|+.....     ......+.++.|+.++..+++.+    ++.+ .+++|++||...+...           
T Consensus        77 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~-----------  144 (255)
T TIGR01963        77 GGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVAS-----------  144 (255)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCCC-----------
Confidence            3579999999865421     11122366788999988887776    4444 6799999997655311           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchH-------HHHHHHHhCC
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSV-------RSTLAMVLGN  217 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~-------~~~~~~~~~~  217 (327)
                                 +....|+.+|...+.+++.++.+   .+++++++||+.+++|..........       .......   
T Consensus       145 -----------~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---  210 (255)
T TIGR01963       145 -----------PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREV---  210 (255)
T ss_pred             -----------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHH---
Confidence                       11346999999999999887765   38999999999999985321100000       0000000   


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                        ..+....+++++++|+|++++.+++...   .+..|+++++
T Consensus       211 --~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g  251 (255)
T TIGR01963       211 --MLPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGG  251 (255)
T ss_pred             --HHccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcCc
Confidence              0011112479999999999999997642   2446777653

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.91  E-value=1.2e-22  Score=172.71  Aligned_cols=217  Identities=19%  Similarity=0.096  Sum_probs=147.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      ++++|||||+|+||++++++|+++|++|++++| ++........+...   ..++.++.+|++|.+++.++++       
T Consensus         8 ~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          8 GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDR-SELVHEVAAELRAA---GGEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-chHHHHHHHHHHhc---CCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999 33221222222211   2467889999999887776654       


Q ss_pred             CCCEEEEccCCCC-------CCCCchHHHHHHHHHhHHHHHHH----HHHhcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 GCAGVIHVAAPID-------IDGKETEEVMTQRAVNGTIGILK----SCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 ~~d~vih~a~~~~-------~~~~~~~~~~~~~nv~~~~~l~~----~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                      ++|++||+||...       .+.+++ ...+++|+.++..+++    .+++.+ ..+||++||...++            
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~------------  149 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQI-EAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATRG------------  149 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHH-HHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccccC------------
Confidence            5799999998431       112233 3667889887765554    444444 56899999987552            


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCC---------CCCchHHHHHHHH
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICP---------KFAGSVRSTLAMV  214 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~---------~~~~~~~~~~~~~  214 (327)
                                  .+..+|+.+|...+.+++.++.++   ++++++++|+.+++|....         ........+....
T Consensus       150 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (260)
T PRK12823        150 ------------INRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQT  217 (260)
T ss_pred             ------------CCCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHH
Confidence                        112359999999999999998765   8999999999999984110         0011122222222


Q ss_pred             hCCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          215 LGNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       215 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ... .++.     -+.+++|+++++++++....   .+..+++++.
T Consensus       218 ~~~-~~~~-----~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  257 (260)
T PRK12823        218 LDS-SLMK-----RYGTIDEQVAAILFLASDEASYITGTVLPVGGG  257 (260)
T ss_pred             hcc-CCcc-----cCCCHHHHHHHHHHHcCcccccccCcEEeecCC
Confidence            111 1111     46689999999999987542   2346666543

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.3e-22  Score=172.24  Aligned_cols=220  Identities=19%  Similarity=0.153  Sum_probs=152.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      |+|++|||||+|+||+++++.|+++|++|++++|....... ....+...   ..++.++.+|++|++++.++++     
T Consensus         1 ~~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (256)
T PRK12745          1 MRPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL---GVEVIFFPADVADLSAHEAMLDAAQAA   77 (256)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999984332211 11222111   2468899999999988776654     


Q ss_pred             --CCCEEEEccCCCCCC-------CCchHHHHHHHHHhHHHHHHHHHHhc----CC-----ccEEEEeccceeeeecCCC
Q 020334           78 --GCAGVIHVAAPIDID-------GKETEEVMTQRAVNGTIGILKSCLKS----GT-----VKRFVYTSSGSTVYFSGKD  139 (327)
Q Consensus        78 --~~d~vih~a~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~-----~~~~v~~SS~~v~~~~~~~  139 (327)
                        .+|+||||||.....       .....++.++.|+.++.++++++.+.    ..     ..+||++||...+...   
T Consensus        78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---  154 (256)
T PRK12745         78 WGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS---  154 (256)
T ss_pred             cCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC---
Confidence              579999999864311       11223477899999999998887543    11     4579999997765311   


Q ss_pred             CCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhC
Q 020334          140 VDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLG  216 (327)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~  216 (327)
                                         .+.+.|+.+|...|.+++.++.+   .+++++++||+.+.++......    .........
T Consensus       155 -------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~----~~~~~~~~~  211 (256)
T PRK12745        155 -------------------PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVT----AKYDALIAK  211 (256)
T ss_pred             -------------------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccc----hhHHhhhhh
Confidence                               22456999999999999998865   5899999999999987533211    111111111


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ...+.     ..+.+++|+++++..++....   .+..|++.+.
T Consensus       212 ~~~~~-----~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg  250 (256)
T PRK12745        212 GLVPM-----PRWGEPEDVARAVAALASGDLPYSTGQAIHVDGG  250 (256)
T ss_pred             cCCCc-----CCCcCHHHHHHHHHHHhCCcccccCCCEEEECCC
Confidence            11111     268899999999999886542   2446777553

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.91  E-value=1.2e-22  Score=171.18  Aligned_cols=220  Identities=20%  Similarity=0.181  Sum_probs=153.3

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |.+++++||||||+|+||.+++++|+++|++|++++| ++...... ..+..   ...++.++.+|+.|++++.++++  
T Consensus         1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~   76 (246)
T PRK05653          1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDS-NEEAAEALAAELRA---AGGEARVLVFDVSDEAAVRALIEAA   76 (246)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHH
Confidence            6555689999999999999999999999999999999 44332222 11211   12467889999999988877664  


Q ss_pred             -----CCCEEEEccCCCCCCC-----CchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 -----GCAGVIHVAAPIDIDG-----KETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 -----~~d~vih~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                           .+|+|||++|......     .+...+.++.|+.++.++++.+.    +.+ .++||++||..... +       
T Consensus        77 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~-~-------  147 (246)
T PRK05653         77 VEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVT-G-------  147 (246)
T ss_pred             HHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcc-C-------
Confidence                 4699999998654211     11223678899999999988885    334 67999999975432 1       


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    ..+...|+.+|...+.+++.++++   .+++++++||+.++++.... ....   ...... ....
T Consensus       148 --------------~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~-~~~~---~~~~~~-~~~~  208 (246)
T PRK05653        148 --------------NPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG-LPEE---VKAEIL-KEIP  208 (246)
T ss_pred             --------------CCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh-hhHH---HHHHHH-hcCC
Confidence                          122456999999999998888765   38999999999999986432 0111   111111 1111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPDA---KGRYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  257 (327)
                      .     ..+++++|+++++..++.....   +..|+++++
T Consensus       209 ~-----~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg  243 (246)
T PRK05653        209 L-----GRLGQPEEVANAVAFLASDAASYITGQVIPVNGG  243 (246)
T ss_pred             C-----CCCcCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence            1     3688999999999999876332   335666543

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.91  E-value=1e-22  Score=172.87  Aligned_cols=221  Identities=17%  Similarity=0.172  Sum_probs=153.4

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+++++|||||+|+||.++++.|+++|++|++++| +...........     ..++.++.+|++|.+++.++++     
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADI-KPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVER   77 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcC-CHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999 433222221111     1357889999999998877665     


Q ss_pred             --CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhcC----CccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 --GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKSG----TVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 --~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~----~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                        ++|++||+|+.....     ..+.....++.|+.++..+++++...-    ...+||++||..... +          
T Consensus        78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-~----------  146 (257)
T PRK07067         78 FGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR-G----------  146 (257)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC-C----------
Confidence              579999999865321     112233779999999999999886431    125899999964321 1          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHH-------HHHHHHhC
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVR-------STLAMVLG  216 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~-------~~~~~~~~  216 (327)
                                 .++...|+.+|...+.+++.++.+   .++++++++|+.++++..... ...+.       .......+
T Consensus       147 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~  214 (257)
T PRK07067        147 -----------EALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQV-DALFARYENRPPGEKKRLVG  214 (257)
T ss_pred             -----------CCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhh-hhhhhhccCCCHHHHHHHHh
Confidence                       123457999999999999988764   589999999999999853211 00000       00000111


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ...++     +.+++++|+|+++.+++....   .+.+|+++++
T Consensus       215 ~~~~~-----~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  253 (257)
T PRK07067        215 EAVPL-----GRMGVPDDLTGMALFLASADADYIVAQTYNVDGG  253 (257)
T ss_pred             hcCCC-----CCccCHHHHHHHHHHHhCcccccccCcEEeecCC
Confidence            11111     379999999999999998653   2457887543

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.6e-22  Score=169.92  Aligned_cols=215  Identities=19%  Similarity=0.164  Sum_probs=148.8

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |...+++++||||+|+||++++++|+++|++|+++.|+..........+.    ...++.++.+|++|++++.++++   
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~i~   76 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA----AGGRAFARQGDVGSAEAVEALVDFVA   76 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            55567899999999999999999999999999999994321111122221    12467899999999998877664   


Q ss_pred             ----CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 ----GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                          ++|+|||+++.....     ..+.....++.|+.++.++.+.+    ++.+ .++|+++||..... +        
T Consensus        77 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~-~--------  146 (252)
T PRK06138         77 ARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALA-G--------  146 (252)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhcc-C--------
Confidence                689999999864321     11222366889999987776655    3444 67999999976542 1        


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchH-HHHHHHHhCCccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSV-RSTLAMVLGNREE  220 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~  220 (327)
                                   ....++|+.+|...+.+++.++.++   +++++++||+.++++.......... .............
T Consensus       147 -------------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  213 (252)
T PRK06138        147 -------------GRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHP  213 (252)
T ss_pred             -------------CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCC
Confidence                         1224579999999999999988665   8999999999999985332111100 0001110111111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                      .     ..+++++|+++++++++.++.
T Consensus       214 ~-----~~~~~~~d~a~~~~~l~~~~~  235 (252)
T PRK06138        214 M-----NRFGTAEEVAQAALFLASDES  235 (252)
T ss_pred             C-----CCCcCHHHHHHHHHHHcCchh
Confidence            1     147899999999999998754

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.90  E-value=2.4e-22  Score=182.16  Aligned_cols=231  Identities=17%  Similarity=0.179  Sum_probs=156.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCC----CC--CCCCeEEEeCCCCChhHHHHHhc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNL----PG--ASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~----~~--~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      +++||||||+|+||++++++|+++|++|++++| +......+ ..+...    .+  ...+++++.+|+.|.+++.+.+.
T Consensus        80 gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~R-n~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg  158 (576)
T PLN03209         80 EDLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG  158 (576)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc
Confidence            578999999999999999999999999999999 44332222 111110    00  01358899999999999999999


Q ss_pred             CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhc
Q 020334           78 GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKL  157 (327)
Q Consensus        78 ~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~  157 (327)
                      ++|+||||+|.......++. ..+++|+.++.++++++++.+ +++||++||.++...+      ..+..          
T Consensus       159 giDiVVn~AG~~~~~v~d~~-~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~g------~p~~~----------  220 (576)
T PLN03209        159 NASVVICCIGASEKEVFDVT-GPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKVG------FPAAI----------  220 (576)
T ss_pred             CCCEEEEccccccccccchh-hHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcccC------ccccc----------
Confidence            99999999986532222333 668899999999999999887 8999999998653111      00000          


Q ss_pred             CCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHH
Q 020334          158 DIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVAR  237 (327)
Q Consensus       158 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  237 (327)
                      ......|...|..+|+.+.    +.|+++++||||.++++.........+    .. ......+     ...+..+|+|+
T Consensus       221 ~~sk~~~~~~KraaE~~L~----~sGIrvTIVRPG~L~tp~d~~~~t~~v----~~-~~~d~~~-----gr~isreDVA~  286 (576)
T PLN03209        221 LNLFWGVLCWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNL----TL-SEEDTLF-----GGQVSNLQVAE  286 (576)
T ss_pred             hhhHHHHHHHHHHHHHHHH----HcCCCEEEEECCeecCCccccccccce----ee-ccccccC-----CCccCHHHHHH
Confidence            0123457778888888775    369999999999999875432101100    00 0001111     14688999999


Q ss_pred             HHHHhhcCCC-C-CceEEE-eccc---cCHHHHHHHH
Q 020334          238 AHIFLLEYPD-A-KGRYIC-SSAK---LTIQEMAEFL  268 (327)
Q Consensus       238 ~~~~~~~~~~-~-~~~y~~-~~~~---~s~~e~~~~i  268 (327)
                      ++++++.++. . +.++.+ ++..   .++.++...+
T Consensus       287 vVvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~i  323 (576)
T PLN03209        287 LMACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAKI  323 (576)
T ss_pred             HHHHHHcCchhccceEEEEEeCCCCCCCCHHHHHHhc
Confidence            9999998654 3 346654 3332   4555555544

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.9e-22  Score=169.89  Aligned_cols=222  Identities=17%  Similarity=0.178  Sum_probs=152.2

Q ss_pred             CCCC-CCeEEEeCCcchhHHHHHHHHHHCCCeEEEE-EcCCCCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc
Q 020334            1 MEEQ-KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTT-VRSDPEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         1 m~~~-~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      |..+ +++|+||||+|+||++++++|+++|++|+++ .| +.... .....+...   ..++.++.+|++|++++.++++
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~~i~~~~~   76 (254)
T PRK12746          1 MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGR-NKQAADETIREIESN---GGKAFLIEADLNSIDGVKKLVE   76 (254)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHHHhc---CCcEEEEEcCcCCHHHHHHHHH
Confidence            4433 4799999999999999999999999999775 45 33221 111122111   2467889999999998877665


Q ss_pred             -------------CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCC
Q 020334           78 -------------GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGK  138 (327)
Q Consensus        78 -------------~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~  138 (327)
                                   ++|+|||+||.....     ..+.....++.|+.++.++++.+.+.- ..+++|++||..++..   
T Consensus        77 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~---  153 (254)
T PRK12746         77 QLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLG---  153 (254)
T ss_pred             HHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCC---
Confidence                         489999999864421     111223677899999999999887641 1358999999876631   


Q ss_pred             CCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC-chHHHHHHHH
Q 020334          139 DVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFA-GSVRSTLAMV  214 (327)
Q Consensus       139 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~-~~~~~~~~~~  214 (327)
                                         .++...|+.+|...+.+++.++++   .++++++++|+.+++|....... ..+...   .
T Consensus       154 -------------------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~---~  211 (254)
T PRK12746        154 -------------------FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNF---A  211 (254)
T ss_pred             -------------------CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHH---H
Confidence                               122456999999999998888765   47999999999999885332111 111111   1


Q ss_pred             hCCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          215 LGNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       215 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .. ...+     ..+++++|+++++..++..+.   .+.+|++.+.
T Consensus       212 ~~-~~~~-----~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        212 TN-SSVF-----GRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             Hh-cCCc-----CCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            11 1111     267799999999999887643   3457776543

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.90  E-value=3.2e-22  Score=168.85  Aligned_cols=218  Identities=15%  Similarity=0.117  Sum_probs=151.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++++||||+|+||++++++|+++|++|+++.++.+...... ..+...   ..++.++.+|++|++++.++++      
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE---GHDVYAVQADVSKVEDANRLVEEAVNHF   82 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999987665333222221 222211   2468899999999998887765      


Q ss_pred             -CCCEEEEccCCCCCCC-----CchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 -GCAGVIHVAAPIDIDG-----KETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 -~~d~vih~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                       .+|+|||+|+......     .....+.+++|+.++..+++++...   ...+++|++||...+...            
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------  150 (247)
T PRK12935         83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG------------  150 (247)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC------------
Confidence             3799999998744211     1223477899999999999888743   114689999996544210            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                                .+...|+.+|...+.+++.+..++   ++++++++|+.+.++.... .+..   ........ ..     
T Consensus       151 ----------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~---~~~~~~~~-~~-----  210 (247)
T PRK12935        151 ----------FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE-VPEE---VRQKIVAK-IP-----  210 (247)
T ss_pred             ----------CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh-ccHH---HHHHHHHh-CC-----
Confidence                      224569999999999988887654   8999999999998764221 1111   11111111 11     


Q ss_pred             CCCeeeHHHHHHHHHHhhcCC--CCCceEEEecc
Q 020334          226 NISMVHIDDVARAHIFLLEYP--DAKGRYICSSA  257 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~--~~~~~y~~~~~  257 (327)
                      .+.+.+++|++++++++++..  ..+..|++.+.
T Consensus       211 ~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g  244 (247)
T PRK12935        211 KKRFGQADEIAKGVVYLCRDGAYITGQQLNINGG  244 (247)
T ss_pred             CCCCcCHHHHHHHHHHHcCcccCccCCEEEeCCC
Confidence            136899999999999999764  24557887654

>PRK06182 short chain dehydrogenase; Validated

Probab=99.90  E-value=5.2e-22  Score=170.05  Aligned_cols=219  Identities=20%  Similarity=0.127  Sum_probs=148.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +++++||||+|+||++++++|+++|++|++++| +++.   +..+..     .+++++.+|++|.+++.++++       
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r-~~~~---l~~~~~-----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~   73 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGYTVYGAAR-RVDK---MEDLAS-----LGVHPLSLDVTDEASIKAAVDTIIAEEG   73 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHh-----CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            689999999999999999999999999999999 4322   222221     357889999999998887765       


Q ss_pred             CCCEEEEccCCCCCC------CCchHHHHHHHHHhHH----HHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDID------GKETEEVMTQRAVNGT----IGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~----~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|+|||+||.....      .+++. ..+++|+.++    ..++..+++.+ .+++|++||...+...           
T Consensus        74 ~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~-----------  140 (273)
T PRK06182         74 RIDVLVNNAGYGSYGAIEDVPIDEAR-RQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIYT-----------  140 (273)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHH-HHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCCC-----------
Confidence            689999999865421      12333 7789999885    44555666655 6799999996533100           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC--------CchHHHHHHHHhC
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKF--------AGSVRSTLAMVLG  216 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~--------~~~~~~~~~~~~~  216 (327)
                                 +....|+.+|...+.+.+.++.+   .|++++++||+.+.+|......        ............ 
T Consensus       141 -----------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-  208 (273)
T PRK06182        141 -----------PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVA-  208 (273)
T ss_pred             -----------CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHH-
Confidence                       12346999999999988877643   4899999999999987532100        000000000000 


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCCCCCceEEEeccc
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYICSSAK  258 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~  258 (327)
                      .. .........+..++|+|++++.++........|+++...
T Consensus       209 ~~-~~~~~~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g~~~  249 (273)
T PRK06182        209 AS-MRSTYGSGRLSDPSVIADAISKAVTARRPKTRYAVGFGA  249 (273)
T ss_pred             HH-HHHhhccccCCCHHHHHHHHHHHHhCCCCCceeecCcch
Confidence            00 000001135789999999999999876555677765443

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=3.1e-22  Score=169.73  Aligned_cols=218  Identities=17%  Similarity=0.132  Sum_probs=151.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||++++++|+++|++|++++| ++..... ...+...   +.++.++.+|++|.+++.++++      
T Consensus        10 ~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~i~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523         10 GRRALVTGSSQGIGYALAEGLAQAGAEVILNGR-DPAKLAAAAESLKGQ---GLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHhc---CceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            589999999999999999999999999999999 4322221 2222211   2357889999999998887765      


Q ss_pred             -CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 -GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 -~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                       .+|+|||+||.....     ..+...+.+++|+.++.++++++.+.   ...+++|++||......             
T Consensus        86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-------------  152 (255)
T PRK07523         86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALA-------------  152 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccC-------------
Confidence             479999999865321     11222367889999999999988753   12579999999654310             


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                               .+....|+.+|...+.+++.++.+   +|++++++||+.+.++........  ........ ...+.    
T Consensus       153 ---------~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~--~~~~~~~~-~~~~~----  216 (255)
T PRK07523        153 ---------RPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD--PEFSAWLE-KRTPA----  216 (255)
T ss_pred             ---------CCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC--HHHHHHHH-hcCCC----
Confidence                     122457999999999999988764   489999999999999853321111  11111111 11122    


Q ss_pred             CCCeeeHHHHHHHHHHhhcCCCC---CceEEEec
Q 020334          226 NISMVHIDDVARAHIFLLEYPDA---KGRYICSS  256 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~  256 (327)
                       ..+..++|+|+++++++.....   +..+++.+
T Consensus       217 -~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~g  249 (255)
T PRK07523        217 -GRWGKVEELVGACVFLASDASSFVNGHVLYVDG  249 (255)
T ss_pred             -CCCcCHHHHHHHHHHHcCchhcCccCcEEEECC
Confidence             2578999999999999976432   33566644

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.90  E-value=1.6e-22  Score=159.09  Aligned_cols=295  Identities=14%  Similarity=0.088  Sum_probs=216.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d   80 (327)
                      ..+|||||+-|++|..++..|..+ |- .|+..+...|.. ..          ...-.++..|+.|...+++++-  ++|
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~-~V----------~~~GPyIy~DILD~K~L~eIVVn~RId  112 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA-NV----------TDVGPYIYLDILDQKSLEEIVVNKRID  112 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch-hh----------cccCCchhhhhhccccHHHhhcccccc
Confidence            468999999999999999999865 54 576665533321 11          1345788899999999998874  699


Q ss_pred             EEEEccCCCC-CCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           81 GVIHVAAPID-IDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        81 ~vih~a~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      .+||..+..+ ..+++-. ...++|+.|..|+++.+++++  -++...||.++||.. +...|.+.-+.         +.
T Consensus       113 WL~HfSALLSAvGE~NVp-LA~~VNI~GvHNil~vAa~~k--L~iFVPSTIGAFGPt-SPRNPTPdltI---------QR  179 (366)
T KOG2774|consen  113 WLVHFSALLSAVGETNVP-LALQVNIRGVHNILQVAAKHK--LKVFVPSTIGAFGPT-SPRNPTPDLTI---------QR  179 (366)
T ss_pred             eeeeHHHHHHHhcccCCc-eeeeecchhhhHHHHHHHHcC--eeEeecccccccCCC-CCCCCCCCeee---------ec
Confidence            9999998755 3444433 778999999999999999987  467778999988732 22233333322         57


Q ss_pred             CchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCC--CCCchHHHHHHHHhCCc--cccccccCCCeeeHHHH
Q 020334          160 WGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICP--KFAGSVRSTLAMVLGNR--EEYSILLNISMVHIDDV  235 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~v~D~  235 (327)
                      |.+.||.||..+|.+-+.+..++|+.+-.+|.+.++.....+  .....+..+..+...++  ..+......++.|.+|+
T Consensus       180 PRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc  259 (366)
T KOG2774|consen  180 PRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDC  259 (366)
T ss_pred             CceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHH
Confidence            789999999999999999988899999999988888643221  11222323333332222  34445555789999999


Q ss_pred             HHHHHHhhcCCCC---CceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCccc-ccccccccChHHH-HhccccccccH
Q 020334          236 ARAHIFLLEYPDA---KGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEI-EGYKLSALSSKKL-LDICFTYKYGI  310 (327)
Q Consensus       236 a~~~~~~~~~~~~---~~~y~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~k~-~~lg~~p~~~~  310 (327)
                      .++++.++..+..   ..+||+++-..|..|++..+.+..+.+.+.+....... .+.+...+|.+.+ .+..|+.++.+
T Consensus       260 ~~~~~~~~~a~~~~lkrr~ynvt~~sftpee~~~~~~~~~p~~~i~y~~~srq~iad~wp~~~dds~ar~~wh~~h~~~l  339 (366)
T KOG2774|consen  260 MASVIQLLAADSQSLKRRTYNVTGFSFTPEEIADAIRRVMPGFEIDYDICTRQSIADSWPMSLDDSEARTEWHEKHSLHL  339 (366)
T ss_pred             HHHHHHHHhCCHHHhhhheeeeceeccCHHHHHHHHHhhCCCceeecccchhhhhhhhcccccCchhHhhHHHHhhhhhH
Confidence            9999999877643   34899999999999999999999997776653222222 5667788999998 88888888888


Q ss_pred             HHHHHHHHHHHHH
Q 020334          311 DEMFDGAIKCCKE  323 (327)
Q Consensus       311 ~~~l~~~~~~~~~  323 (327)
                      ...+.-++.--++
T Consensus       340 ~~~i~~~i~~~~~  352 (366)
T KOG2774|consen  340 LSIISTVVAVHKS  352 (366)
T ss_pred             HHHHHHHHHHHHh
Confidence            8877777765443

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=6.1e-22  Score=167.56  Aligned_cols=222  Identities=17%  Similarity=0.131  Sum_probs=152.5

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |...++++|||||+|+||.+++++|+++|++|++++| ++...... ..+..    ..++.++.+|+.|++++..+++  
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~   75 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDR-NEEAAERVAAEILA----GGRAIAVAADVSDEADVEAAVAAA   75 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHhc----CCeEEEEECCCCCHHHHHHHHHHH
Confidence            5555689999999999999999999999999999999 44332221 22211    2457899999999999987764  


Q ss_pred             -----CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCc
Q 020334           78 -----GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDM  142 (327)
Q Consensus        78 -----~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~  142 (327)
                           ++|+|||+|+.....      ..+...+.++.|+.++..+++.+.+    .+ .++||++||...+..       
T Consensus        76 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~-------  147 (251)
T PRK07231         76 LERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLRP-------  147 (251)
T ss_pred             HHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcCC-------
Confidence                 579999999864311      1122237789999988777776654    34 679999999876631       


Q ss_pred             ccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcc
Q 020334          143 LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNRE  219 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (327)
                                     .++...|+.+|...+.+++.+++++   +++++.++|+.+.++................... ..
T Consensus       148 ---------------~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~-~~  211 (251)
T PRK07231        148 ---------------RPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLA-TI  211 (251)
T ss_pred             ---------------CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhc-CC
Confidence                           1234579999999999998887654   8999999999997764322111000011111111 11


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCCC--CceE-EEec
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPDA--KGRY-ICSS  256 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~y-~~~~  256 (327)
                      .     ...+++++|+|++++.++.....  .|.+ .+.+
T Consensus       212 ~-----~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g  246 (251)
T PRK07231        212 P-----LGRLGTPEDIANAALFLASDEASWITGVTLVVDG  246 (251)
T ss_pred             C-----CCCCcCHHHHHHHHHHHhCccccCCCCCeEEECC
Confidence            1     12688999999999999976432  3444 4544

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6.2e-22  Score=169.46  Aligned_cols=235  Identities=15%  Similarity=0.101  Sum_probs=151.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      ++++|||||+|+||+++++.|+++|++|++++|+.+........+...   ..++.++.+|++|++++.++++       
T Consensus         6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE---GFDVHGVMCDVRHREEVTHLADEAFRLLG   82 (275)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999998432211112222211   2357889999999998877664       


Q ss_pred             CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 ~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      ++|+|||+||.....     ..+.....+++|+.++.++++++..    .+..+++|++||...+..             
T Consensus        83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~-------------  149 (275)
T PRK05876         83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP-------------  149 (275)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC-------------
Confidence            479999999864311     1122236789999999998888753    322468999999876531             


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc-c
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI-L  224 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  224 (327)
                               .++.+.|+.+|...+.+.+.++.+   .|+++++++|+.+.++..... .. ................. .
T Consensus       150 ---------~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~-~~~~~~~~~~~~~~~~~~~  218 (275)
T PRK05876        150 ---------NAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANS-ER-IRGAACAQSSTTGSPGPLP  218 (275)
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccch-hh-hcCcccccccccccccccc
Confidence                     133557999999866666665544   489999999999988753221 00 00000000000001111 1


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHH
Q 020334          225 LNISMVHIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSA  270 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~  270 (327)
                      ..+++++++|+|++++.++.++.   .|.+. .......+.+.+.+
T Consensus       219 ~~~~~~~~~dva~~~~~ai~~~~---~~~~~-~~~~~~~~~~~~~~  260 (275)
T PRK05876        219 LQDDNLGVDDIAQLTADAILANR---LYVLP-HAASRASIRRRFER  260 (275)
T ss_pred             ccccCCCHHHHHHHHHHHHHcCC---eEEec-ChhhHHHHHHHHHH
Confidence            12578999999999999997652   44443 23344444444433

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8.5e-22  Score=164.11  Aligned_cols=205  Identities=20%  Similarity=0.177  Sum_probs=143.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---CCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---GCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~   81 (327)
                      +|++|||||+|+||+++++.|+++ ++|++++| ++.....+..  .    ..+++++.+|+.|.+++.+++.   ++|+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r-~~~~~~~~~~--~----~~~~~~~~~D~~~~~~~~~~~~~~~~id~   74 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGR-PAERLDELAA--E----LPGATPFPVDLTDPEAIAAAVEQLGRLDV   74 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeC-CHHHHHHHHH--H----hccceEEecCCCCHHHHHHHHHhcCCCCE
Confidence            678999999999999999999999 99999999 4322211111  0    1357889999999999988886   5899


Q ss_pred             EEEccCCCCCCC-----CchHHHHHHHHHhHHHH----HHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChh
Q 020334           82 VIHVAAPIDIDG-----KETEEVMTQRAVNGTIG----ILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDED  152 (327)
Q Consensus        82 vih~a~~~~~~~-----~~~~~~~~~~nv~~~~~----l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~  152 (327)
                      |||+++......     .....+.++.|+.+...    +++.+++.  .+++|++||...++..                
T Consensus        75 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~~~~~~~----------------  136 (227)
T PRK08219         75 LVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSGAGLRAN----------------  136 (227)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcchHhcCcC----------------
Confidence            999998754221     11123567888888544    44444444  3689999998765311                


Q ss_pred             HhhhcCCCchhhHhhhHHHHHHHHHHHHHc-C-CcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCee
Q 020334          153 YIRKLDIWGKSYVLTKTLTERAALEFAEEH-G-LDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMV  230 (327)
Q Consensus       153 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~-~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  230 (327)
                            .+..+|+.+|...+.+++.++.+. + +++..++|+.+.++....        ... ..+..  .   ....++
T Consensus       137 ------~~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~--------~~~-~~~~~--~---~~~~~~  196 (227)
T PRK08219        137 ------PGWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRG--------LVA-QEGGE--Y---DPERYL  196 (227)
T ss_pred             ------CCCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhh--------hhh-hhccc--c---CCCCCC
Confidence                  224569999999999888877643 5 899999998766553111        000 01111  1   123689


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEEe
Q 020334          231 HIDDVARAHIFLLEYPDAKGRYICS  255 (327)
Q Consensus       231 ~v~D~a~~~~~~~~~~~~~~~y~~~  255 (327)
                      +++|++++++.+++.+..+.+|++.
T Consensus       197 ~~~dva~~~~~~l~~~~~~~~~~~~  221 (227)
T PRK08219        197 RPETVAKAVRFAVDAPPDAHITEVV  221 (227)
T ss_pred             CHHHHHHHHHHHHcCCCCCccceEE
Confidence            9999999999999987655677654

>PRK06194 hypothetical protein; Provisional

Probab=99.89  E-value=3.1e-22  Score=172.80  Aligned_cols=216  Identities=13%  Similarity=0.025  Sum_probs=144.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++++|||||+|+||++++++|+++|++|++++| +...... ...+...   ..++.++.+|++|.+++.++++      
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~   81 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGMKLVLADV-QQDALDRAVAELRAQ---GAEVLGVRTDVSDAAQVEALADAALERF   81 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999999 4322222 2222211   2467889999999998887765      


Q ss_pred             -CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHH----HHhcCC-----ccEEEEeccceeeeecCCCCCc
Q 020334           78 -GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKS----CLKSGT-----VKRFVYTSSGSTVYFSGKDVDM  142 (327)
Q Consensus        78 -~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~----~~~~~~-----~~~~v~~SS~~v~~~~~~~~~~  142 (327)
                       ++|+|||+||.....     ..+.....+++|+.++.+++++    +.+.+.     ..++|++||...+...      
T Consensus        82 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------  155 (287)
T PRK06194         82 GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP------  155 (287)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC------
Confidence             479999999875421     1122236789999999887776    444331     1589999998766311      


Q ss_pred             ccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcC-----CcEEEEecCceecCCCCCCCCchHHHHHHHHhCC
Q 020334          143 LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG-----LDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGN  217 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-----~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~  217 (327)
                                      ++.++|+.+|...+.+++.++.+++     +++..+.|+.+..+....            ..+.
T Consensus       156 ----------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~------------~~~~  207 (287)
T PRK06194        156 ----------------PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS------------ERNR  207 (287)
T ss_pred             ----------------CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc------------cccC
Confidence                            2235699999999999999887653     666677776554432110            0111


Q ss_pred             ccccccc--cCCCeeeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhC
Q 020334          218 REEYSIL--LNISMVHIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKH  272 (327)
Q Consensus       218 ~~~~~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~~~  272 (327)
                      +......  ..++|++++|.+..+....              .++..|+++.+.+.+
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~s~~dva~~i~~~~  250 (287)
T PRK06194        208 PADLANTAPPTRSQLIAQAMSQKAVGSG--------------KVTAEEVAQLVFDAI  250 (287)
T ss_pred             chhcccCccccchhhHHHHHHHhhhhcc--------------CCCHHHHHHHHHHHH
Confidence            1111111  1257778887777654221              167777777777654

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.9e-22  Score=168.34  Aligned_cols=212  Identities=19%  Similarity=0.176  Sum_probs=148.3

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |-+.+++||||||+|+||++++++|+++|++|++++| ++.....+ ..+...   ..++.++.+|++|.+++..+++  
T Consensus         1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   76 (258)
T PRK07890          1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAAR-TAERLDEVAAEIDDL---GRRALAVPTDITDEDQCANLVALA   76 (258)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHHh---CCceEEEecCCCCHHHHHHHHHHH
Confidence            3445689999999999999999999999999999999 44322222 122111   2467899999999998876653  


Q ss_pred             -----CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCCCcc
Q 020334           78 -----GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 -----~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                           ++|+|||+|+....       +.+.+ ...++.|+.++..+++++.+.-  ..++||++||...+..        
T Consensus        77 ~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~--------  147 (258)
T PRK07890         77 LERFGRVDALVNNAFRVPSMKPLADADFAHW-RAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS--------  147 (258)
T ss_pred             HHHcCCccEEEECCccCCCCCCcccCCHHHH-HHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC--------
Confidence                 57999999986421       11233 3779999999999999887531  1358999999765421        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc-------hHHHHHHH
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAG-------SVRSTLAM  213 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~-------~~~~~~~~  213 (327)
                                    .++...|+.+|...+.+++.++.++   +++++++||+.+++|........       ........
T Consensus       148 --------------~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (258)
T PRK07890        148 --------------QPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAE  213 (258)
T ss_pred             --------------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHH
Confidence                          1224569999999999999988654   89999999999999863221100       00111111


Q ss_pred             HhCCccccccccCCCeeeHHHHHHHHHHhhcC
Q 020334          214 VLGNREEYSILLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       214 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                      ... ....     ..+.+++|++++++++++.
T Consensus       214 ~~~-~~~~-----~~~~~~~dva~a~~~l~~~  239 (258)
T PRK07890        214 TAA-NSDL-----KRLPTDDEVASAVLFLASD  239 (258)
T ss_pred             Hhh-cCCc-----cccCCHHHHHHHHHHHcCH
Confidence            111 1111     2578999999999999875

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-21  Score=167.35  Aligned_cols=218  Identities=17%  Similarity=0.137  Sum_probs=148.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      .+++|||||+|+||++++++|+++|++|++++| ++.....+.....    ..++.++.+|++|++++.++++       
T Consensus        11 ~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (264)
T PRK12829         11 GLRVLVTGGASGIGRAIAEAFAEAGARVHVCDV-SEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAVERFG   85 (264)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            579999999999999999999999999999999 4332222211111    1156889999999998877654       


Q ss_pred             CCCEEEEccCCCC-C------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCc-cEEEEeccceeeeecCCCCCcccC
Q 020334           78 GCAGVIHVAAPID-I------DGKETEEVMTQRAVNGTIGILKSCLK----SGTV-KRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 ~~d~vih~a~~~~-~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~-~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                      ++|+|||+||... .      ..+.+ .+.++.|+.++.++++++.+    .+ . ++++++||..... +         
T Consensus        86 ~~d~vi~~ag~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~vv~~ss~~~~~-~---------  153 (264)
T PRK12829         86 GLDVLVNNAGIAGPTGGIDEITPEQW-EQTLAVNLNGQFYFARAAVPLLKASG-HGGVIIALSSVAGRL-G---------  153 (264)
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEeccccccc-C---------
Confidence            6899999998752 1      11223 47899999999998887743    33 3 6788888754331 1         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc-------hHHHHHHHHh
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAG-------SVRSTLAMVL  215 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~-------~~~~~~~~~~  215 (327)
                                  .++...|+.+|...|.+++.++++.   +++++++||+.++||........       ......... 
T Consensus       154 ------------~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-  220 (264)
T PRK12829        154 ------------YPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEY-  220 (264)
T ss_pred             ------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHH-
Confidence                        0123469999999999999987654   89999999999999864321110       000000000 


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ....     ....+++++|+++++..++....   .+..|+++++
T Consensus       221 ~~~~-----~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g  260 (264)
T PRK12829        221 LEKI-----SLGRMVEPEDIAATALFLASPAARYITGQAISVDGN  260 (264)
T ss_pred             HhcC-----CCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCC
Confidence            0000     11368999999999999886432   2346666543

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1e-21  Score=164.93  Aligned_cols=206  Identities=22%  Similarity=0.260  Sum_probs=147.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC-cchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH-KKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+++||||||+|+||++++++|+++|++|++++| ++.. ......+..     .+++.+.+|+.|.+++.++++     
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGR-GAAPLSQTLPGVPA-----DALRIGGIDLVDPQAARRAVDEVNRQ   79 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeC-ChHhHHHHHHHHhh-----cCceEEEeecCCHHHHHHHHHHHHHH
Confidence            3579999999999999999999999999999999 4322 222222221     356788899999988877664     


Q ss_pred             --CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 --GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 --~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                        ++|+|||+++.....     ..+...+.++.|+.++.++++++.+    .+ .+++|++||...++..          
T Consensus        80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~----------  148 (239)
T PRK12828         80 FGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKAG----------  148 (239)
T ss_pred             hCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccCC----------
Confidence              589999999864311     1112236688999999998888753    34 7899999998766411          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                  ++...|+.+|...+.+++.++++   .+++++++||+.++++......+           ..  .+  
T Consensus       149 ------------~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~-----------~~--~~--  201 (239)
T PRK12828        149 ------------PGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMP-----------DA--DF--  201 (239)
T ss_pred             ------------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCC-----------ch--hh--
Confidence                        22346999999999888877654   48999999999999984221100           00  01  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCCC--Cc-eEEEec
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPDA--KG-RYICSS  256 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~  256 (327)
                         ..+++++|+++++.+++.+...  .| .+++.+
T Consensus       202 ---~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g  234 (239)
T PRK12828        202 ---SRWVTPEQIAAVIAFLLSDEAQAITGASIPVDG  234 (239)
T ss_pred             ---hcCCCHHHHHHHHHHHhCcccccccceEEEecC
Confidence               1489999999999999986532  24 445544

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-21  Score=166.68  Aligned_cols=226  Identities=14%  Similarity=0.060  Sum_probs=148.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      |+++||||||+|+||.+++++|+++|++|++++| +....... ..+.... ...++.++.+|++|.+++..++.     
T Consensus         1 m~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r-~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~   78 (259)
T PRK12384          1 MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADI-NSEKAANVAQEINAEY-GEGMAYGFGADATSEQSVLALSRGVDEI   78 (259)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHHhc-CCceeEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 43222221 2221110 01358899999999988776654     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        .+|+|||+||....      ..+.+ ...+++|+.++..+++++.+    .+...++|++||..... +         
T Consensus        79 ~~~id~vv~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~-~---------  147 (259)
T PRK12384         79 FGRVDLLVYNAGIAKAAFITDFQLGDF-DRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKV-G---------  147 (259)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHH-HHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCccccc-C---------
Confidence              57999999986431      11222 36789999998877776654    22125899999864321 1         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhC-Cc---
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLG-NR---  218 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~-~~---  218 (327)
                                  .....+|+.+|...+.+++.++.+   .|++++++|||.++++....   ..+......... ..   
T Consensus       148 ------------~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~---~~~~~~~~~~~~~~~~~~  212 (259)
T PRK12384        148 ------------SKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ---SLLPQYAKKLGIKPDEVE  212 (259)
T ss_pred             ------------CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh---hhhHHHHHhcCCChHHHH
Confidence                        012346999999999988888753   58999999999988764321   111111110000 00   


Q ss_pred             cccccc-cCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          219 EEYSIL-LNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       219 ~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ..+... ..+.+++++|+++++++++.+..   .+..|++++.
T Consensus       213 ~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g  255 (259)
T PRK12384        213 QYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGG  255 (259)
T ss_pred             HHHHHhCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCC
Confidence            000000 11478999999999999987643   2446777554

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=8.9e-22  Score=166.65  Aligned_cols=223  Identities=14%  Similarity=0.039  Sum_probs=152.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+++||||||+|+||++++++|+++|++|++..|+.+... .....+...   ..++.++.+|+++++++..+++     
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN---GGEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc---CCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            3589999999999999999999999999988776332221 111222211   2356788999999988776654     


Q ss_pred             --CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           78 --GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        78 --~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                        ++|+|||+||.....     ........+++|+.+...+++++.+.- ..++||++||...+..              
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------  147 (252)
T PRK06077         82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRP--------------  147 (252)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCC--------------
Confidence              579999999863321     111123678999999999888887641 1358999999876631              


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCC
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNI  227 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (327)
                              .++.+.|+.+|...|.+++.+++++  ++++.+++|+.+.++..... .................     ..
T Consensus       148 --------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~-~~~~~~~~~~~~~~~~~-----~~  213 (252)
T PRK06077        148 --------AYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESL-FKVLGMSEKEFAEKFTL-----MG  213 (252)
T ss_pred             --------CCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhh-hhcccccHHHHHHhcCc-----CC
Confidence                    1335679999999999999998875  68999999999988742210 00000000000000001     12


Q ss_pred             CeeeHHHHHHHHHHhhcCCCC-CceEEEecc
Q 020334          228 SMVHIDDVARAHIFLLEYPDA-KGRYICSSA  257 (327)
Q Consensus       228 ~~i~v~D~a~~~~~~~~~~~~-~~~y~~~~~  257 (327)
                      .+++++|+|++++.++..... +++|++++.
T Consensus       214 ~~~~~~dva~~~~~~~~~~~~~g~~~~i~~g  244 (252)
T PRK06077        214 KILDPEEVAEFVAAILKIESITGQVFVLDSG  244 (252)
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCeEEecCC
Confidence            689999999999999976543 557887543

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.89  E-value=7e-22  Score=169.03  Aligned_cols=216  Identities=17%  Similarity=0.126  Sum_probs=148.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +++|+||||+|+||++++++|+++|++|++++| ++.....          ..+++++++|++|++++.++++       
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r-~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   72 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSR-NPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAG   72 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC-Chhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999999999 4322211          1467899999999999888775       


Q ss_pred             CCCEEEEccCCCCCCC-----CchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 GCAGVIHVAAPIDIDG-----KETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 ~~d~vih~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      .+|+||||||......     .+.....+++|+.++.++++++    ++.+ .++||++||...+..             
T Consensus        73 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~-------------  138 (270)
T PRK06179         73 RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLP-------------  138 (270)
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCC-------------
Confidence            4799999998754211     1122478999999988888875    4445 689999999765421             


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC--chHHHHHHHHhCCcccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFA--GSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~  223 (327)
                               .+....|+.+|...+.+++.++.+   .|+++++++|+.+.++.......  ..+............... 
T Consensus       139 ---------~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  208 (270)
T PRK06179        139 ---------APYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVA-  208 (270)
T ss_pred             ---------CCCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHH-
Confidence                     122456999999999998887654   49999999999998875432111  011100000000000000 


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCCCCceEEEe
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPDAKGRYICS  255 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~  255 (327)
                      ........++|+++.++.++..+.....|...
T Consensus       209 ~~~~~~~~~~~va~~~~~~~~~~~~~~~~~~~  240 (270)
T PRK06179        209 KAVKKADAPEVVADTVVKAALGPWPKMRYTAG  240 (270)
T ss_pred             hccccCCCHHHHHHHHHHHHcCCCCCeeEecC
Confidence            00013567899999999999886555566543

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.89  E-value=2e-21  Score=164.28  Aligned_cols=220  Identities=18%  Similarity=0.154  Sum_probs=151.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++++|||||+|+||++++++|+++|++|++++| +......+ ..+...   ..++.++.+|+.|.++++++++      
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDL-NREAAEKVAADIRAK---GGNAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecC-CHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999999999999 43222222 112211   2468899999999998887664      


Q ss_pred             -CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 -GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 -~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                       ++|+|||+++.....     ......+.+++|+.++.++++++.    +.+ .+++|++||...+...           
T Consensus        79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~~-----------  146 (250)
T TIGR03206        79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVGS-----------  146 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccCC-----------
Confidence             589999999864311     111123679999999999888765    334 5799999998776411           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC--chHHHHHHHHhCCccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFA--GSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~  222 (327)
                                 .....|+.+|.+.+.+++.++++.   +++++++||+.++++.......  ............ ..+..
T Consensus       147 -----------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  214 (250)
T TIGR03206       147 -----------SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTR-AIPLG  214 (250)
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHh-cCCcc
Confidence                       113469999999999998887764   8999999999999885322110  000111111111 11111


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                           .+..++|+|+++.+++....   .+.++++.++
T Consensus       215 -----~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  247 (250)
T TIGR03206       215 -----RLGQPDDLPGAILFFSSDDASFITGQVLSVSGG  247 (250)
T ss_pred             -----CCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCC
Confidence                 46778999999999987643   2345666543

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.3e-21  Score=162.82  Aligned_cols=207  Identities=17%  Similarity=0.138  Sum_probs=146.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhC-CCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTN-LPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      ++|+|+||||+|+||.++++.|+++|++|++++|...........+.. ......++.++.+|+.|++++.+.++     
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE   84 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999988733222222222110 01112467899999999998877663     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH-----hcCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL-----KSGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~-----~~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        ++|+|||+||....      +.+.+ ...++.|+.++.++++++.     +.+ .+++|++||...+...        
T Consensus        85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~--------  154 (249)
T PRK12827         85 FGRLDILVNNAGIATDAAFAELSIEEW-DDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRGN--------  154 (249)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHH-HHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCCC--------
Confidence              58999999987541      11222 3678999999999999987     333 5789999998766311        


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                    .+...|+.+|...+.+++.++.+.   +++++++||+.+.++........  ....   ...+  .
T Consensus       155 --------------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~--~~~~---~~~~--~  213 (249)
T PRK12827        155 --------------RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT--EHLL---NPVP--V  213 (249)
T ss_pred             --------------CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH--HHHH---hhCC--C
Confidence                          224469999999999988887653   89999999999999864332111  1111   1111  1


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      .     .+..++|++++++.++...
T Consensus       214 ~-----~~~~~~~va~~~~~l~~~~  233 (249)
T PRK12827        214 Q-----RLGEPDEVAALVAFLVSDA  233 (249)
T ss_pred             c-----CCcCHHHHHHHHHHHcCcc
Confidence            1     3568899999999998653

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.8e-21  Score=164.12  Aligned_cols=214  Identities=18%  Similarity=0.201  Sum_probs=150.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---CCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---GCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~   81 (327)
                      +++++||||+|+||.++++.|+++|++|++++| +++....+.   ..    .+..++.+|++|.+.+.++++   ++|+
T Consensus         9 ~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r-~~~~~~~~~---~~----~~~~~~~~D~~~~~~v~~~~~~~~~~d~   80 (245)
T PRK07060          9 GKSVLVTGASSGIGRACAVALAQRGARVVAAAR-NAAALDRLA---GE----TGCEPLRLDVGDDAAIRAALAAAGAFDG   80 (245)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH---HH----hCCeEEEecCCCHHHHHHHHHHhCCCCE
Confidence            378999999999999999999999999999999 433222221   11    145788899999988888775   4899


Q ss_pred             EEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccCCCCCChh
Q 020334           82 VIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDED  152 (327)
Q Consensus        82 vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~  152 (327)
                      |||+|+.....     ......+.+..|+.++.++++++.+.    +..++||++||...+...                
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------------  144 (245)
T PRK07060         81 LVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL----------------  144 (245)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC----------------
Confidence            99999865421     11222366789999999999888753    113689999997765311                


Q ss_pred             HhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCe
Q 020334          153 YIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISM  229 (327)
Q Consensus       153 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (327)
                            .+...|+.+|...|.+++.+++++   +++++.+||+.++++..........  ....... ...     ...+
T Consensus       145 ------~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~--~~~~~~~-~~~-----~~~~  210 (245)
T PRK07060        145 ------PDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQ--KSGPMLA-AIP-----LGRF  210 (245)
T ss_pred             ------CCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHH--HHHHHHh-cCC-----CCCC
Confidence                  223469999999999999988653   7999999999999986432111110  0111110 011     1368


Q ss_pred             eeHHHHHHHHHHhhcCCCC---CceEEEec
Q 020334          230 VHIDDVARAHIFLLEYPDA---KGRYICSS  256 (327)
Q Consensus       230 i~v~D~a~~~~~~~~~~~~---~~~y~~~~  256 (327)
                      ++++|++++++.++..+..   +..+++.+
T Consensus       211 ~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~  240 (245)
T PRK07060        211 AEVDDVAAPILFLLSDAASMVSGVSLPVDG  240 (245)
T ss_pred             CCHHHHHHHHHHHcCcccCCccCcEEeECC
Confidence            9999999999999976432   33455544

>PRK06128 oxidoreductase; Provisional

Probab=99.89  E-value=2.3e-21  Score=168.14  Aligned_cols=219  Identities=12%  Similarity=0.070  Sum_probs=152.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC-Ccc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE-HKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +|++|||||+|+||.+++++|++.|++|++..++... ... ....+...   ..++.++.+|++|.+++.++++     
T Consensus        55 ~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         55 GRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE---GRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc---CCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999888773221 111 11122211   2467889999999988877654     


Q ss_pred             --CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 --GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 --~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                        ++|++||+||....       +.+++ ...+++|+.++..+++++.+.- ...+||++||...|...           
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-----------  199 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQF-DATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS-----------  199 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC-----------
Confidence              58999999986321       12234 4889999999999999987541 13599999998776311           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                 .....|+.+|...+.+++.++++.   |+++++++||.+.+|......  .......... ...++   
T Consensus       200 -----------~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~--~~~~~~~~~~-~~~p~---  262 (300)
T PRK06128        200 -----------PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGG--QPPEKIPDFG-SETPM---  262 (300)
T ss_pred             -----------CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCC--CCHHHHHHHh-cCCCC---
Confidence                       223469999999999999988764   899999999999998643211  0111111111 11122   


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 020334          225 LNISMVHIDDVARAHIFLLEYPDA---KGRYICSSA  257 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  257 (327)
                        ..+.+++|++.++++++.....   +..|++++.
T Consensus       263 --~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg  296 (300)
T PRK06128        263 --KRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGG  296 (300)
T ss_pred             --CCCcCHHHHHHHHHHHhCccccCccCcEEeeCCC
Confidence              2578999999999999876432   346676543

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=2.3e-21  Score=163.92  Aligned_cols=219  Identities=17%  Similarity=0.119  Sum_probs=148.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEE-EcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTT-VRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +++++||||+|+||++++++|+++|++|+++ .| +...... ...+...   ..++.++.+|++|++++.++++     
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYAR-SRKAAEETAEEIEAL---GRKALAVKANVGDVEKIKEMFAQIDEE   79 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHHHhc---CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999998764 56 3322211 1222211   2467889999999998877665     


Q ss_pred             --CCCEEEEccCCCCCCC-----CchHHHHHHHHHhHHHHHHHHHHhcC---CccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 --GCAGVIHVAAPIDIDG-----KETEEVMTQRAVNGTIGILKSCLKSG---TVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 --~~d~vih~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                        .+|+|||+||......     .+.....+++|+.++..+++++.+..   +.++||++||...+..            
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------  147 (250)
T PRK08063         80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY------------  147 (250)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC------------
Confidence              4799999998643211     11122567899999988888877532   2569999999755420            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                .++...|+.+|...|.+++.++.+   .++++++++|+.+..+.... .+... ......... ...   
T Consensus       148 ----------~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~-~~~~~-~~~~~~~~~-~~~---  211 (250)
T PRK08063        148 ----------LENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKH-FPNRE-ELLEDARAK-TPA---  211 (250)
T ss_pred             ----------CCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhh-ccCch-HHHHHHhcC-CCC---
Confidence                      122457999999999999988765   48999999999998775322 11111 111111111 111   


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 020334          225 LNISMVHIDDVARAHIFLLEYPDA---KGRYICSSA  257 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  257 (327)
                        ..+++++|+|+++++++..+..   +..+++.+.
T Consensus       212 --~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg  245 (250)
T PRK08063        212 --GRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGG  245 (250)
T ss_pred             --CCCcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence              1579999999999999976432   345666543

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.7e-21  Score=165.21  Aligned_cols=218  Identities=13%  Similarity=0.091  Sum_probs=152.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++|+..............  ...++.++.+|++|.+.+.++++       
T Consensus        46 ~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         46 GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK--EGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh--cCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999432222222111111  12467889999999998877664       


Q ss_pred             CCCEEEEccCCCCCC-------CCchHHHHHHHHHhHHHHHHHHHHhc-CCccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           78 GCAGVIHVAAPIDID-------GKETEEVMTQRAVNGTIGILKSCLKS-GTVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        78 ~~d~vih~a~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                      ++|+|||+|+.....       .+.+ ...+++|+.++.++++++.+. ....++|++||...+...             
T Consensus       124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~-------------  189 (290)
T PRK06701        124 RLDILVNNAAFQYPQQSLEDITAEQL-DKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN-------------  189 (290)
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHH-HHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC-------------
Confidence            579999999864311       1122 378999999999999998763 113589999998776311             


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                               .....|+.+|...+.+++.++.++   |++++.++|+.++++........   ....... .....     
T Consensus       190 ---------~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~---~~~~~~~-~~~~~-----  251 (290)
T PRK06701        190 ---------ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDE---EKVSQFG-SNTPM-----  251 (290)
T ss_pred             ---------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCH---HHHHHHH-hcCCc-----
Confidence                     112359999999999999998764   89999999999998853321111   1111111 11111     


Q ss_pred             CCeeeHHHHHHHHHHhhcCCC---CCceEEEec
Q 020334          227 ISMVHIDDVARAHIFLLEYPD---AKGRYICSS  256 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~  256 (327)
                      ..+.+++|+|+++++++....   .+..+++.+
T Consensus       252 ~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idg  284 (290)
T PRK06701        252 QRPGQPEELAPAYVFLASPDSSYITGQMLHVNG  284 (290)
T ss_pred             CCCcCHHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence            268899999999999998653   233455544

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.8e-21  Score=163.24  Aligned_cols=219  Identities=15%  Similarity=0.113  Sum_probs=147.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      |++++|||||+|+||++++++|+++|++|+...++++...... ..+...   ..++.++.+|++|.+++.++++     
T Consensus         1 ~~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (248)
T PRK06123          1 MRKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ---GGEALAVAADVADEADVLRLFEAVDRE   77 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC---CCcEEEEEeccCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999887765333222211 112211   2457889999999998887665     


Q ss_pred             --CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHHhcC------CccEEEEeccceeeeecCCCCCc
Q 020334           78 --GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCLKSG------TVKRFVYTSSGSTVYFSGKDVDM  142 (327)
Q Consensus        78 --~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~~------~~~~~v~~SS~~v~~~~~~~~~~  142 (327)
                        .+|+|||+|+....       ..+++ .+.+++|+.++.++++++.+.-      ...++|++||...+... +    
T Consensus        78 ~~~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-~----  151 (248)
T PRK06123         78 LGRLDALVNNAGILEAQMRLEQMDAARL-TRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGS-P----  151 (248)
T ss_pred             hCCCCEEEECCCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCC-C----
Confidence              57999999986431       11122 3779999999998888776431      12479999997654211 0    


Q ss_pred             ccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcc
Q 020334          143 LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNRE  219 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (327)
                                      .....|+.+|...+.+++.++.+.   +++++++||+.++||.......   .......... .
T Consensus       152 ----------------~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~---~~~~~~~~~~-~  211 (248)
T PRK06123        152 ----------------GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGE---PGRVDRVKAG-I  211 (248)
T ss_pred             ----------------CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCC---HHHHHHHHhc-C
Confidence                            101359999999999999988764   8999999999999985332111   1111111111 1


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEec
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSS  256 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~  256 (327)
                      ++.     -+.+++|+++++++++....   .+..|++.+
T Consensus       212 p~~-----~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~g  246 (248)
T PRK06123        212 PMG-----RGGTAEEVARAILWLLSDEASYTTGTFIDVSG  246 (248)
T ss_pred             CCC-----CCcCHHHHHHHHHHHhCccccCccCCEEeecC
Confidence            111     24578999999999987642   234666644

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.5e-21  Score=166.06  Aligned_cols=219  Identities=21%  Similarity=0.193  Sum_probs=145.8

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |. |+++|+||||+|+||.+++++|+++|++|++++| +++...   .+..     .+++++.+|++|.+++..+++   
T Consensus         1 m~-~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r-~~~~~~---~l~~-----~~~~~~~~Dl~d~~~~~~~~~~~~   70 (277)
T PRK05993          1 MD-MKRSILITGCSSGIGAYCARALQSDGWRVFATCR-KEEDVA---ALEA-----EGLEAFQLDYAEPESIAALVAQVL   70 (277)
T ss_pred             CC-CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHH---HHHH-----CCceEEEccCCCHHHHHHHHHHHH
Confidence            44 5678999999999999999999999999999999 433322   2221     257889999999988776553   


Q ss_pred             -----CCCEEEEccCCCCCC-----CCchHHHHHHHHHhH----HHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 -----GCAGVIHVAAPIDID-----GKETEEVMTQRAVNG----TIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~----~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                           .+|+|||+||.....     ..+.....+++|+.+    +..+++.+++.+ .++||++||...+..        
T Consensus        71 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~--------  141 (277)
T PRK05993         71 ELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLVP--------  141 (277)
T ss_pred             HHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcCC--------
Confidence                 479999999864321     111223678999998    566677777666 679999999654420        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHH-----------H
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVR-----------S  209 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~-----------~  209 (327)
                                    .++...|+.+|...+.+++.++.+   .|+++++++||.+-.+...........           .
T Consensus       142 --------------~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~  207 (277)
T PRK05993        142 --------------MKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAA  207 (277)
T ss_pred             --------------CCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHH
Confidence                          123457999999999998887643   589999999999877642211000000           0


Q ss_pred             HHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCCCCceEEE
Q 020334          210 TLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYIC  254 (327)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~  254 (327)
                      .......  ...........+.++++|+.++.++.++.....|..
T Consensus       208 ~~~~~~~--~~~~~~~~~~~~~~~~va~~i~~a~~~~~~~~~~~~  250 (277)
T PRK05993        208 YQQQMAR--LEGGGSKSRFKLGPEAVYAVLLHALTAPRPRPHYRV  250 (277)
T ss_pred             HHHHHHH--HHhhhhccccCCCHHHHHHHHHHHHcCCCCCCeeee
Confidence            0000000  000000001235789999999999987654444543

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.88  E-value=5.2e-21  Score=161.48  Aligned_cols=221  Identities=17%  Similarity=0.173  Sum_probs=149.3

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |...+++||||||||+||++++++|+++|++|+++.|+........ ..+...   ..++.++.+|+.|.+++.++++  
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~   77 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL---GGKALAVQGDVSDAESVERAVDEA   77 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHHHHHH
Confidence            4444689999999999999999999999999988888443222221 112111   2467889999999998877654  


Q ss_pred             -----CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhcC---CccEEEEeccceeeeecCCCCCccc
Q 020334           78 -----GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKSG---TVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                           ++|+|||+|+.....     ..+...+.++.|+.++.++++++.+..   ..++||++||...+. +        
T Consensus        78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~-~--------  148 (248)
T PRK05557         78 KAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLM-G--------  148 (248)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCc-C--------
Confidence                 579999999864421     112223678899999999988887541   256899999974432 1        


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   ......|+.+|...+.+++.++++   .+++++++||+.+.++........    ......... ..
T Consensus       149 -------------~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~----~~~~~~~~~-~~  210 (248)
T PRK05557        149 -------------NPGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPED----VKEAILAQI-PL  210 (248)
T ss_pred             -------------CCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChH----HHHHHHhcC-CC
Confidence                         012346999999999888887654   389999999998866543221111    111111111 11


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC--C-CceEEEec
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD--A-KGRYICSS  256 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~  256 (327)
                           ..+.+++|+++++.+++....  . +..|++.+
T Consensus       211 -----~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~  243 (248)
T PRK05557        211 -----GRLGQPEEIASAVAFLASDEAAYITGQTLHVNG  243 (248)
T ss_pred             -----CCCcCHHHHHHHHHHHcCcccCCccccEEEecC
Confidence                 157899999999998886522  2 33566644

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.6e-21  Score=164.35  Aligned_cols=231  Identities=20%  Similarity=0.229  Sum_probs=155.0

Q ss_pred             CCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            2 EEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      .+..+++|||||+|+||.+++++|+++|++|++++| ++........+...   ..++.++.+|+++++++.++++    
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGR-SAPDDEFAEELRAL---QPRAEFVQVDLTDDAQCRDAVEQTVA   79 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcC-ChhhHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            334579999999999999999999999999999999 43332222222221   3468899999999998877664    


Q ss_pred             ---CCCEEEEccCCCCCC----CCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 ---GCAGVIHVAAPIDID----GKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 ---~~d~vih~a~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                         ++|+|||+||.....    ..+.....++.|+.++..+.+.+.+.  ...++|+++||...+..             
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-------------  146 (258)
T PRK08628         80 KFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG-------------  146 (258)
T ss_pred             hcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC-------------
Confidence               579999999854311    11223377899999999888877542  11368999999765521             


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCch--HHHHHHHHhCCcccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGS--VRSTLAMVLGNREEYSI  223 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~  223 (327)
                               ..+...|+.+|...+.+++.++.+   .+++++.++|+.+++|.........  .......... ...+  
T Consensus       147 ---------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~--  214 (258)
T PRK08628        147 ---------QGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITA-KIPL--  214 (258)
T ss_pred             ---------CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHh-cCCc--
Confidence                     122457999999999999998764   4899999999999998532110000  0001111111 1111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEeccccCHHH
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSAKLTIQE  263 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~~~s~~e  263 (327)
                        ...++.++|+++++++++....  ..| .|.+.+....+++
T Consensus       215 --~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~~~  255 (258)
T PRK08628        215 --GHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGYVHLDR  255 (258)
T ss_pred             --cccCCCHHHHHHHHHHHhChhhccccCceEEecCCcccccc
Confidence              0147789999999999997642  234 4556555444443

>PRK05717 oxidoreductase; Validated

Probab=99.88  E-value=4.8e-21  Score=162.45  Aligned_cols=204  Identities=17%  Similarity=0.103  Sum_probs=143.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|+++||||+|+||+++++.|+++|++|++++| +.........  ..   ..++.++.+|++|.+++.++++       
T Consensus        10 ~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~-~~~~~~~~~~--~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   83 (255)
T PRK05717         10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADL-DRERGSKVAK--AL---GENAWFIAMDVADEAQVAAGVAEVLGQFG   83 (255)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcC-CHHHHHHHHH--Hc---CCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999988 3322221111  11   2367889999999988765443       


Q ss_pred             CCCEEEEccCCCCC--------CCCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDI--------DGKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|+|||+||....        +.+++ .+.+++|+.++.++++++.+.  ....++|++||...+...           
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~-----------  151 (255)
T PRK05717         84 RLDALVCNAAIADPHNTTLESLSLAHW-NRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE-----------  151 (255)
T ss_pred             CCCEEEECCCcccCCCCChhhCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC-----------
Confidence            47999999986532        11223 378999999999999998642  113689999997654211           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                                 +..+.|+.+|...+.+++.++.++  +++++.++|+.+.++.........   ....... ....    
T Consensus       152 -----------~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~---~~~~~~~-~~~~----  212 (255)
T PRK05717        152 -----------PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEP---LSEADHA-QHPA----  212 (255)
T ss_pred             -----------CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchH---HHHHHhh-cCCC----
Confidence                       113469999999999999998876  589999999999997532211111   1111111 1111    


Q ss_pred             CCCeeeHHHHHHHHHHhhcCC
Q 020334          226 NISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~  246 (327)
                       ..+.+++|++.++.+++...
T Consensus       213 -~~~~~~~~va~~~~~l~~~~  232 (255)
T PRK05717        213 -GRVGTVEDVAAMVAWLLSRQ  232 (255)
T ss_pred             -CCCcCHHHHHHHHHHHcCch
Confidence             25789999999999998653

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=5.1e-21  Score=162.10  Aligned_cols=209  Identities=17%  Similarity=0.165  Sum_probs=145.1

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |..++++|+||||+|+||+++++.|+++|++|++..++.......+...  .   ..++.++.+|+.|++++.++++   
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~--~---~~~~~~~~~D~~~~~~~~~~~~~~~   75 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADE--L---GDRAIALQADVTDREQVQAMFATAT   75 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH--h---CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            6666789999999999999999999999999988766333222211111  1   1367889999999988877664   


Q ss_pred             ----C-CCEEEEccCCCC---------CC--CCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecC
Q 020334           78 ----G-CAGVIHVAAPID---------ID--GKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSG  137 (327)
Q Consensus        78 ----~-~d~vih~a~~~~---------~~--~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~  137 (327)
                          . +|++||+|+...         ..  ..+...+.++.|+.++..+++++.+    .+ ..++|++||.....   
T Consensus        76 ~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~---  151 (253)
T PRK08642         76 EHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQN---  151 (253)
T ss_pred             HHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCccccC---
Confidence                2 899999997521         00  1112236799999999999988763    23 56899999854221   


Q ss_pred             CCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHH
Q 020334          138 KDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV  214 (327)
Q Consensus       138 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~  214 (327)
                          +               ..+.+.|+.+|...+.+++.+++++   +++++.++||.+..+.........   .....
T Consensus       152 ----~---------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~---~~~~~  209 (253)
T PRK08642        152 ----P---------------VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDE---VFDLI  209 (253)
T ss_pred             ----C---------------CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHH---HHHHH
Confidence                0               1234579999999999999998764   799999999988776322111111   11111


Q ss_pred             hCCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          215 LGNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       215 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      . ...+.     ..+.+++|+++++.+++...
T Consensus       210 ~-~~~~~-----~~~~~~~~va~~~~~l~~~~  235 (253)
T PRK08642        210 A-ATTPL-----RKVTTPQEFADAVLFFASPW  235 (253)
T ss_pred             H-hcCCc-----CCCCCHHHHHHHHHHHcCch
Confidence            1 11222     25889999999999999753

>PRK09186 flagellin modification protein A; Provisional

Probab=99.88  E-value=4e-21  Score=163.05  Aligned_cols=214  Identities=19%  Similarity=0.159  Sum_probs=141.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|+||||||+|+||.++++.|+++|++|++++| +++... ....+.... ....+.++.+|++|++++.++++      
T Consensus         4 ~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          4 GKTILITGAGGLIGSALVKAILEAGGIVIAADI-DKEALNELLESLGKEF-KSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEec-ChHHHHHHHHHHHhhc-CCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999999999999 433322 122221110 01346778999999998887775      


Q ss_pred             -CCCEEEEccCCCCC------C--CCchHHHHHHHHHhHHHHHHHH----HHhcCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 -GCAGVIHVAAPIDI------D--GKETEEVMTQRAVNGTIGILKS----CLKSGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~--~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                       .+|+|||||+....      .  ..+.....+++|+.++..++++    +++.+ .++||++||...+.  .+. .+..
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~-~~~~  157 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVV--APK-FEIY  157 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhc--ccc-chhc
Confidence             37999999964321      0  1122236678888777655554    44444 67999999976543  111 1112


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                      +.++         ......|+.+|...+.+.+.++.+   .++++++++|+.++++.     ...+   ........ . 
T Consensus       158 ~~~~---------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~-----~~~~---~~~~~~~~-~-  218 (256)
T PRK09186        158 EGTS---------MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ-----PEAF---LNAYKKCC-N-  218 (256)
T ss_pred             cccc---------cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC-----CHHH---HHHHHhcC-C-
Confidence            2221         111236999999999999888775   37999999999887653     1111   11111111 1 


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                          ...+++++|+|+++++++....
T Consensus       219 ----~~~~~~~~dva~~~~~l~~~~~  240 (256)
T PRK09186        219 ----GKGMLDPDDICGTLVFLLSDQS  240 (256)
T ss_pred             ----ccCCCCHHHhhhhHhheecccc
Confidence                1258899999999999997643

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=6.9e-21  Score=161.47  Aligned_cols=216  Identities=16%  Similarity=0.136  Sum_probs=145.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|+++||||+|+||.+++++|+++|++|+++.++....   ...+..     .++.++.+|++|++++.++++       
T Consensus         7 ~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06463          7 GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELRE-----KGVFTIKCDVGNRDQVKKSKEVVEKEFG   78 (255)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHh-----CCCeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            58899999999999999999999999999887733322   222221     257889999999998877664       


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHH----HHHHHhcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGI----LKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l----~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|+||||||....      +.+.+ ...+++|+.++..+    +..+++.+ .+++|++||...++..           
T Consensus        79 ~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~-----------  145 (255)
T PRK06463         79 RVDVLVNNAGIMYLMPFEEFDEEKY-NKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTA-----------  145 (255)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHH-HHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCC-----------
Confidence            57999999986431      12233 37789999996554    44454444 5799999998765311           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC-CchHHHHHHHHhCCcccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKF-AGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~  223 (327)
                                ......|+.+|...+.+++.++.++   +++++.++|+.+-.+...... .............. .+.  
T Consensus       146 ----------~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~--  212 (255)
T PRK06463        146 ----------AEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNK-TVL--  212 (255)
T ss_pred             ----------CCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhC-CCc--
Confidence                      0123469999999999999988653   899999999988665422111 11111111111111 111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                         ..+..++|+++++++++....  ..| .+.+.+.
T Consensus       213 ---~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg  246 (255)
T PRK06463        213 ---KTTGKPEDIANIVLFLASDDARYITGQVIVADGG  246 (255)
T ss_pred             ---CCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence               246789999999999987643  233 4555443

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.88  E-value=7.2e-21  Score=160.88  Aligned_cols=207  Identities=22%  Similarity=0.230  Sum_probs=145.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++++||||+|+||++++++|+++|++|++++| +++..... ..+...   ..++.++.+|+.|++++.++++      
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDG-LAAEARELAAALEAA---GGRAHAIAADLADPASVQRFFDAAAAAL   82 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            488999999999999999999999999999988 43322222 222211   2468899999999998887763      


Q ss_pred             -CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhcC---CccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 -GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKSG---TVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 -~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                       ++|+|||++|.....     ........++.|+.++.++++++.+.-   ...++|++||...+...            
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------  150 (250)
T PRK12939         83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA------------  150 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC------------
Confidence             589999999864321     112223668899999999988876431   13599999997654211            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                                .....|+.+|...+.+++.++.+   .+++++.++|+.+.++.........   ........ ...    
T Consensus       151 ----------~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~-~~~----  212 (250)
T PRK12939        151 ----------PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADE---RHAYYLKG-RAL----  212 (250)
T ss_pred             ----------CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChH---HHHHHHhc-CCC----
Confidence                      12346999999999999988755   4799999999998877533211111   11111111 111    


Q ss_pred             CCCeeeHHHHHHHHHHhhcCC
Q 020334          226 NISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~  246 (327)
                       ..+++++|++++++.++...
T Consensus       213 -~~~~~~~dva~~~~~l~~~~  232 (250)
T PRK12939        213 -ERLQVPDDVAGAVLFLLSDA  232 (250)
T ss_pred             -CCCCCHHHHHHHHHHHhCcc
Confidence             26899999999999999764

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.2e-20  Score=160.21  Aligned_cols=218  Identities=16%  Similarity=0.137  Sum_probs=149.7

Q ss_pred             CCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            2 EEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      +.++|++|||||+|+||.+++++|+++|++|+++.+++......+ ..+...   ..++.++.+|++|.+++.++++   
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~   82 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL---GRRAVALQADLADEAEVRALVARAS   82 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            345679999999999999999999999999988877333222111 112111   2468889999999998877664   


Q ss_pred             ----CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhcC---CccEEEEeccceeeeecCCCCCcccC
Q 020334           78 ----GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKSG---TVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                          ++|+||||||.....     ..+...+.+++|+.++..+++++....   ..+++|++||...+..          
T Consensus        83 ~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~----------  152 (258)
T PRK09134         83 AALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL----------  152 (258)
T ss_pred             HHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC----------
Confidence                479999999864321     112234789999999999998877542   1358888887654420          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                  .+....|+.+|...|.+.+.+++++  +++++.++||.+..+...     ....+.......  ... 
T Consensus       153 ------------~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~-----~~~~~~~~~~~~--~~~-  212 (258)
T PRK09134        153 ------------NPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ-----SPEDFARQHAAT--PLG-  212 (258)
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCccc-----ChHHHHHHHhcC--CCC-
Confidence                        0113469999999999999988765  489999999988765311     111111111111  111 


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCCCCc-eEEEec
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPDAKG-RYICSS  256 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~  256 (327)
                          ...+++|+|++++++++.+...| .|++.+
T Consensus       213 ----~~~~~~d~a~~~~~~~~~~~~~g~~~~i~g  242 (258)
T PRK09134        213 ----RGSTPEEIAAAVRYLLDAPSVTGQMIAVDG  242 (258)
T ss_pred             ----CCcCHHHHHHHHHHHhcCCCcCCCEEEECC
Confidence                35789999999999998766555 555544

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.88  E-value=9e-21  Score=159.83  Aligned_cols=222  Identities=16%  Similarity=0.174  Sum_probs=151.3

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |..++++++||||+|+||++++++|+++|++|+++.|+.+.....+ ..+...   ..++.++.+|++|++++.++++  
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~   77 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA---GGRAIAVQADVADAAAVTRLFDAA   77 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHH
Confidence            6667789999999999999999999999999988877443222211 222211   2468899999999998877765  


Q ss_pred             -----CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -----GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                           ++|+|||+||.....     ..+...+.++.|+.++.++++++.+.- ...++|++||...+. .          
T Consensus        78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-~----------  146 (245)
T PRK12937         78 ETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL-P----------  146 (245)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC-C----------
Confidence                 589999999864321     112223678999999999988876542 135899999865432 1          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .++.+.|+.+|...+.+++.++.++   ++++++++|+.+-++........   ......... .++. 
T Consensus       147 -----------~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~---~~~~~~~~~-~~~~-  210 (245)
T PRK12937        147 -----------LPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSA---EQIDQLAGL-APLE-  210 (245)
T ss_pred             -----------CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCH---HHHHHHHhc-CCCC-
Confidence                       1224579999999999999887653   79999999998877642111111   111111111 1111 


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCCC--Cc-eEEEec
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPDA--KG-RYICSS  256 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~  256 (327)
                          .+.+++|+++++.+++.....  .| .+++.+
T Consensus       211 ----~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  242 (245)
T PRK12937        211 ----RLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNG  242 (245)
T ss_pred             ----CCCCHHHHHHHHHHHcCccccCccccEEEeCC
Confidence                466889999999999976432  23 445543

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.88  E-value=3.5e-21  Score=169.57  Aligned_cols=267  Identities=22%  Similarity=0.253  Sum_probs=177.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC---CeEEEEEcCCCCC--cchhhhh----------hCCCCCCCCeEEEeCCCCCh
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG---YFVTTTVRSDPEH--KKDLSFL----------TNLPGASERLQIFNADLNDP   69 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~--~~~~~~~----------~~~~~~~~~~~~~~~D~~d~   69 (327)
                      .|+|||||||||+|.-+++.|+..-   -+++.+.|.....  ..++...          ...+....++..+.||++++
T Consensus        12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~   91 (467)
T KOG1221|consen   12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEP   91 (467)
T ss_pred             CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCc
Confidence            6899999999999999999999752   3788888843322  1111111          12234457899999999865


Q ss_pred             ------hHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeec-CCCCCc
Q 020334           70 ------ESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFS-GKDVDM  142 (327)
Q Consensus        70 ------~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~-~~~~~~  142 (327)
                            ++++.+.+++|+|||+||.+.+.  ++.+....+|+.|++++++.|++....+.++|+||+++.-.. .-.+.+
T Consensus        92 ~LGis~~D~~~l~~eV~ivih~AAtvrFd--e~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~  169 (467)
T KOG1221|consen   92 DLGISESDLRTLADEVNIVIHSAATVRFD--EPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKP  169 (467)
T ss_pred             ccCCChHHHHHHHhcCCEEEEeeeeeccc--hhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccc
Confidence                  45565677999999999987765  445577899999999999999998778999999998765100 001122


Q ss_pred             ccCCC------------CCChhHh----h-hcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCc
Q 020334          143 LDETF------------WSDEDYI----R-KLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAG  205 (327)
Q Consensus       143 ~~E~~------------~~~~~~~----~-~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~  205 (327)
                      +.+..            +.+.+..    . -...+++.|.-+|+++|.++....  .++|++|+||+.|......+ ++.
T Consensus       170 y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~EP-~pG  246 (467)
T KOG1221|consen  170 YPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYKEP-FPG  246 (467)
T ss_pred             cCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceeccccCC-CCC
Confidence            21111            0011111    1 112356779999999999999875  47999999999999877655 244


Q ss_pred             hHHHHH-----HHHhCCcc----ccccccCCCeeeHHHHHHHHHHhhcC--CC----CCceEEEe-c--cccCHHHHHHH
Q 020334          206 SVRSTL-----AMVLGNRE----EYSILLNISMVHIDDVARAHIFLLEY--PD----AKGRYICS-S--AKLTIQEMAEF  267 (327)
Q Consensus       206 ~~~~~~-----~~~~~~~~----~~~~~~~~~~i~v~D~a~~~~~~~~~--~~----~~~~y~~~-~--~~~s~~e~~~~  267 (327)
                      ++....     ....+++.    ........++|.+|.++++++.+.-+  ..    ...+||++ +  .++++.++.+.
T Consensus       247 Widn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~  326 (467)
T KOG1221|consen  247 WIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIEL  326 (467)
T ss_pred             ccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHH
Confidence            432211     00112221    11111226999999999999876521  11    13389964 3  35999999999


Q ss_pred             HHHhCCCCC
Q 020334          268 LSAKHPEYP  276 (327)
Q Consensus       268 i~~~~~~~~  276 (327)
                      ........+
T Consensus       327 ~~~~~~~~P  335 (467)
T KOG1221|consen  327 ALRYFEKIP  335 (467)
T ss_pred             HHHhcccCC
Confidence            888655333

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.88  E-value=7.3e-21  Score=162.11  Aligned_cols=207  Identities=17%  Similarity=0.131  Sum_probs=145.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++||||||+|+||.++++.|+++|++|++++| ++.... ....+...   ..++.++.+|+.|.+.+..+++      
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   76 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAAR-NETRLASLAQELADH---GGEALVVPTDVSDAEACERLIEAAVARF   76 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            368999999999999999999999999999999 432222 12222221   2468889999999998877665      


Q ss_pred             -CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 -GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 -~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                       ++|+|||||+.....      ..+...+.++.|+.++.++++.+.+.  ...+++|++||...+...            
T Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~------------  144 (263)
T PRK06181         77 GGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV------------  144 (263)
T ss_pred             CCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC------------
Confidence             589999999864421      11112367899999999999988642  114789999998766311            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                                .+...|+.+|...+.+++.+..+   .++++++++|+.+..+........         .+.........
T Consensus       145 ----------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---------~~~~~~~~~~~  205 (263)
T PRK06181        145 ----------PTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDG---------DGKPLGKSPMQ  205 (263)
T ss_pred             ----------CCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccc---------ccccccccccc
Confidence                      22457999999999998887654   489999999999987743211100         00100001111


Q ss_pred             CCCeeeHHHHHHHHHHhhcCC
Q 020334          226 NISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      ..++++++|+|++++.+++..
T Consensus       206 ~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        206 ESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             ccCCCCHHHHHHHHHHHhhCC
Confidence            137899999999999999863

>PLN02253 xanthoxin dehydrogenase

Probab=99.88  E-value=1.4e-20  Score=161.76  Aligned_cols=220  Identities=17%  Similarity=0.134  Sum_probs=148.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||++++++|+++|++|++++| +......+ ..+    ....++.++.+|++|++++.++++      
T Consensus        18 ~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   92 (280)
T PLN02253         18 GKVALVTGGATGIGESIVRLFHKHGAKVCIVDL-QDDLGQNVCDSL----GGEPNVCFFHCDVTVEDDVSRAVDFTVDKF   92 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh----cCCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999998 33222111 111    112468899999999998887765      


Q ss_pred             -CCCEEEEccCCCCCC--------CCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 -GCAGVIHVAAPIDID--------GKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 -~~d~vih~a~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                       ++|++||+||.....        .+++ +..+++|+.++..+++++.+.   ....++|++||.......         
T Consensus        93 g~id~li~~Ag~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~---------  162 (280)
T PLN02253         93 GTLDIMVNNAGLTGPPCPDIRNVELSEF-EKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG---------  162 (280)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHH-HHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC---------
Confidence             689999999864311        1233 478999999999988877642   113589999886543101         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc------hHHHHHHHHhC
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAG------SVRSTLAMVLG  216 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~------~~~~~~~~~~~  216 (327)
                                   +....|+.+|...|.+++.++.++   ++++..++|+.+.++......+.      .+..+......
T Consensus       163 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (280)
T PLN02253        163 -------------LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGK  229 (280)
T ss_pred             -------------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhc
Confidence                         113469999999999999988764   79999999999988743211111      01001111111


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .. ..    ....++++|+++++++++....   .+..+++.+.
T Consensus       230 ~~-~l----~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG  268 (280)
T PLN02253        230 NA-NL----KGVELTVDDVANAVLFLASDEARYISGLNLMIDGG  268 (280)
T ss_pred             CC-CC----cCCCCCHHHHHHHHHhhcCcccccccCcEEEECCc
Confidence            11 10    0135789999999999987543   2335555443

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.88  E-value=5.4e-21  Score=161.89  Aligned_cols=201  Identities=14%  Similarity=0.093  Sum_probs=144.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      .+++|||||+|+||++++++|+++|++|++++| ++     ..   .   ...++.++++|+.|++++.++++       
T Consensus         8 ~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~-~~-----~~---~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK08220          8 GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQ-AF-----LT---Q---EDYPFATFVLDVSDAAAVAQVCQRLLAETG   75 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEec-ch-----hh---h---cCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999 33     10   0   12467889999999998887765       


Q ss_pred             CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 ~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      ++|+|||+++.....     ..+.....+++|+.++..+++++..    .+ .+++|++||......             
T Consensus        76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~~-------------  141 (252)
T PRK08220         76 PLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHVP-------------  141 (252)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhccC-------------
Confidence            479999999875421     1122337899999999999888753    23 468999999654320             


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCch--HHH----HHHHHhCCcc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGS--VRS----TLAMVLGNRE  219 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~--~~~----~~~~~~~~~~  219 (327)
                               ..+.+.|+.+|...+.+++.++.+   .++++++++|+.+++|.........  ...    ...... ...
T Consensus       142 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  211 (252)
T PRK08220        142 ---------RIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFK-LGI  211 (252)
T ss_pred             ---------CCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHh-hcC
Confidence                     122457999999999999988876   5899999999999998532211000  000    000011 111


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      +.     ..+++++|+|+++++++...
T Consensus       212 ~~-----~~~~~~~dva~~~~~l~~~~  233 (252)
T PRK08220        212 PL-----GKIARPQEIANAVLFLASDL  233 (252)
T ss_pred             CC-----cccCCHHHHHHHHHHHhcch
Confidence            11     36899999999999998753

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.88  E-value=1.4e-20  Score=158.94  Aligned_cols=211  Identities=18%  Similarity=0.162  Sum_probs=148.4

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |..++++||||||+|+||.+++++|+++|++|++++| +.. ......+...   ..++.++.+|+++.+++..+++   
T Consensus         1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r-~~~-~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   75 (248)
T TIGR01832         1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGR-SEP-SETQQQVEAL---GRRFLSLTADLSDIEAIKALVDSAV   75 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC-chH-HHHHHHHHhc---CCceEEEECCCCCHHHHHHHHHHHH
Confidence            3445789999999999999999999999999999998 331 1111222211   2468899999999998876553   


Q ss_pred             ----CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcc
Q 020334           78 ----GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ----~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                          ++|++||+||.....      .+.+ .+.+++|+.++..+++++.+.    +..+++|++||...+...       
T Consensus        76 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------  147 (248)
T TIGR01832        76 EEFGHIDILVNNAGIIRRADAEEFSEKDW-DDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG-------  147 (248)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHH-HHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC-------
Confidence                589999999865421      1233 377899999999998887642    113689999998766311       


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                     .....|+.+|...+.+++.+++++   |+++++++||.+..+.........  ........ ..+
T Consensus       148 ---------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~--~~~~~~~~-~~~  209 (248)
T TIGR01832       148 ---------------IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADE--DRNAAILE-RIP  209 (248)
T ss_pred             ---------------CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccCh--HHHHHHHh-cCC
Confidence                           113369999999999999998874   899999999999887532111110  00011111 111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                           ...++.++|+|+++++++....
T Consensus       210 -----~~~~~~~~dva~~~~~l~s~~~  231 (248)
T TIGR01832       210 -----AGRWGTPDDIGGPAVFLASSAS  231 (248)
T ss_pred             -----CCCCcCHHHHHHHHHHHcCccc
Confidence                 1368999999999999997543

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08264 short chain dehydrogenase; Validated

Probab=99.88  E-value=1.2e-20  Score=158.31  Aligned_cols=164  Identities=20%  Similarity=0.170  Sum_probs=126.9

Q ss_pred             CCCCCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            2 EEQKGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      ..++++|+||||+|+||++++++|+++|+ +|++++| ++.....         ...++.++.+|+.|.+.+.++++   
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r-~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAAR-DPESVTD---------LGPRVVPLQLDVTDPASVAAAAEAAS   72 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEec-Chhhhhh---------cCCceEEEEecCCCHHHHHHHHHhcC
Confidence            33457999999999999999999999998 9999999 4332211         12478899999999999888776   


Q ss_pred             CCCEEEEccCC-CCC-----CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAP-IDI-----DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~-~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      .+|+|||+++. ...     ...+.....+++|+.++..+++++.+    .+ .++||++||...+..            
T Consensus        73 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~------------  139 (238)
T PRK08264         73 DVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWVN------------  139 (238)
T ss_pred             CCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhccC------------
Confidence            47999999987 221     11222337788999999999988653    33 578999999776531            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCC
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPF  198 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~  198 (327)
                                ..+...|+.+|...+.+.+.++.+.   +++++++||+.+.++.
T Consensus       140 ----------~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~  183 (238)
T PRK08264        140 ----------FPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM  183 (238)
T ss_pred             ----------CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence                      1234579999999999999887654   8999999999997764

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.87  E-value=1.1e-20  Score=159.55  Aligned_cols=203  Identities=19%  Similarity=0.234  Sum_probs=140.4

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------C
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------G   78 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   78 (327)
                      |+|+||||+|+||.++++.|+++|++|++++| ++.....+....     ..++.++.+|+.|.+++.++++       +
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   74 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGR-RQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWRN   74 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            47999999999999999999999999999999 433222221111     2367889999999988876654       6


Q ss_pred             CCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           79 CAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        79 ~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      +|+|||+||....      ...+...+.+++|+.++..+++.+    ++.+ .+++|++||...+. .            
T Consensus        75 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~-~------------  140 (248)
T PRK10538         75 IDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSW-P------------  140 (248)
T ss_pred             CCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCC-C------------
Confidence            8999999986321      111222477899999966665554    4444 67999999975431 0            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC-CCchHHHHHHHHhCCccccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPK-FAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                               ..+.+.|+.+|...+.+.+.++.+.   ++++++++||.+.|+..... ....... ....      +   
T Consensus       141 ---------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~-~~~~------~---  201 (248)
T PRK10538        141 ---------YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGK-AEKT------Y---  201 (248)
T ss_pred             ---------CCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHH-HHhh------c---
Confidence                     1224579999999999999887664   79999999999987642210 1100000 0000      0   


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCC
Q 020334          225 LNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                      ....++.++|+|+++++++..+.
T Consensus       202 ~~~~~~~~~dvA~~~~~l~~~~~  224 (248)
T PRK10538        202 QNTVALTPEDVSEAVWWVATLPA  224 (248)
T ss_pred             cccCCCCHHHHHHHHHHHhcCCC
Confidence            01145789999999999997653

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.4e-20  Score=159.07  Aligned_cols=207  Identities=18%  Similarity=0.166  Sum_probs=142.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +++++||||+|+||++++++|+++|++|++++| +.+......  ...   ..++.++.+|++|.+++..+++       
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r-~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (249)
T PRK06500          6 GKTALITGGTSGIGLETARQFLAEGARVAITGR-DPASLEAAR--AEL---GESALVIRADAGDVAAQKALAQALAEAFG   79 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC-CHHHHHHHH--HHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            579999999999999999999999999999998 332211111  111   2367889999999887665443       


Q ss_pred             CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHhc-CCccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           78 GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLKS-GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        78 ~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                      ++|+|||+||.....      .+.+ ...+++|+.++.++++++.+. ....++|++||..... +              
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~-~--------------  143 (249)
T PRK06500         80 RLDAVFINAGVAKFAPLEDWDEAMF-DRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHI-G--------------  143 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhcc-C--------------
Confidence            589999999864321      1233 378999999999999999752 1135677777754321 1              


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC-C-CchHHHHHHHHhCCcccccccc
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPK-F-AGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                             .+..++|+.+|...|.+++.++.++   +++++++||+.+++|..... . .............. .+..   
T Consensus       144 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~---  212 (249)
T PRK06500        144 -------MPNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQAL-VPLG---  212 (249)
T ss_pred             -------CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhc-CCCC---
Confidence                   0224579999999999998887654   89999999999999842210 0 11111121211111 1111   


Q ss_pred             CCCeeeHHHHHHHHHHhhcCC
Q 020334          226 NISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~  246 (327)
                        -+..++|+++++.+++...
T Consensus       213 --~~~~~~~va~~~~~l~~~~  231 (249)
T PRK06500        213 --RFGTPEEIAKAVLYLASDE  231 (249)
T ss_pred             --CCcCHHHHHHHHHHHcCcc
Confidence              3568999999999998753

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.87  E-value=1e-20  Score=160.82  Aligned_cols=211  Identities=16%  Similarity=0.115  Sum_probs=145.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .++++|||||+|+||.+++++|+++|++|++++| +....... ..+...   ..++.++.+|++|++++.++++     
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~i~~~---~~~~~~~~~Dl~d~~~i~~~~~~~~~~   86 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSAR-KAEELEEAAAHLEAL---GIDALWIAADVADEADIERLAEETLER   86 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHhc---CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999 43222211 122111   2467889999999998866553     


Q ss_pred             --CCCEEEEccCCCCC-----CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 --GCAGVIHVAAPIDI-----DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 --~~d~vih~a~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                        ++|+|||+|+....     ...+...+.++.|+.++.++++++.+.    +..++||++||...+..... .      
T Consensus        87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~-~------  159 (259)
T PRK08213         87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP-E------  159 (259)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc-c------
Confidence              57999999986321     111222367889999999999987654    12579999999766531110 0      


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 ..+..+|+.+|...|.+++.+++++   ++++.+++|+.+-++....    .+........... ... 
T Consensus       160 -----------~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~----~~~~~~~~~~~~~-~~~-  222 (259)
T PRK08213        160 -----------VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG----TLERLGEDLLAHT-PLG-  222 (259)
T ss_pred             -----------ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhh----hhHHHHHHHHhcC-CCC-
Confidence                       0223579999999999999988764   7999999999887764322    1222222111111 111 


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCC
Q 020334          224 LLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                          .+...+|+++++.+++...
T Consensus       223 ----~~~~~~~va~~~~~l~~~~  241 (259)
T PRK08213        223 ----RLGDDEDLKGAALLLASDA  241 (259)
T ss_pred             ----CCcCHHHHHHHHHHHhCcc
Confidence                3567899999999988654

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9.2e-21  Score=160.88  Aligned_cols=197  Identities=18%  Similarity=0.151  Sum_probs=141.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      |+++|+||||+|+||.+++++|+++|++|++++| +++........  ... ..++.++.+|++|++++.++++      
T Consensus         1 ~~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r-~~~~~~~~~~~--~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   76 (257)
T PRK07024          1 MPLKVFITGASSGIGQALAREYARQGATLGLVAR-RTDALQAFAAR--LPK-AARVSVYAADVRDADALAAAAADFIAAH   76 (257)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHh--ccc-CCeeEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            3579999999999999999999999999999999 43222221111  111 1268899999999998877654      


Q ss_pred             -CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHH----HHHhcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILK----SCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~----~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       .+|++||+||.....      ..+.....+++|+.++..+++    .+++.+ .++||++||...+...          
T Consensus        77 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~~----------  145 (257)
T PRK07024         77 GLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRGL----------  145 (257)
T ss_pred             CCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCC----------
Confidence             379999999864311      112234789999999988776    444444 5799999997654211          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                  +....|+.+|...+.+++.++.+   .|++++++||+.+.+|.....               ....+ 
T Consensus       146 ------------~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---------------~~~~~-  197 (257)
T PRK07024        146 ------------PGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN---------------PYPMP-  197 (257)
T ss_pred             ------------CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC---------------CCCCC-
Confidence                        12346999999999999887643   489999999999988742210               00000 


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                          .++.++|+++.++.++.++.
T Consensus       198 ----~~~~~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        198 ----FLMDADRFAARAARAIARGR  217 (257)
T ss_pred             ----CccCHHHHHHHHHHHHhCCC
Confidence                24679999999999998753

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.5e-20  Score=158.07  Aligned_cols=204  Identities=18%  Similarity=0.139  Sum_probs=145.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      .+++|||||+|+||.+++++|+++|++|++++| +.........+.     ..++..+.+|+++++++.++++       
T Consensus        15 ~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r-~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   88 (255)
T PRK06841         15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDR-SEDVAEVAAQLL-----GGNAKGLVCDVSDSQSVEAAVAAVISAFG   88 (255)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHhh-----CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999 432221111111     1356789999999998877664       


Q ss_pred             CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 ~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      ++|+|||+||.....     ..+...+.+++|+.++.++++++.+.    + .++||++||.......            
T Consensus        89 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~------------  155 (255)
T PRK06841         89 RIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVVAL------------  155 (255)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhccCC------------
Confidence            579999999865421     11222367899999999999887653    3 5799999997643211            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                                +....|+.+|...+.+++.++.++   |++++.++|+.+..+..........   ..... ...+.    
T Consensus       156 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~---~~~~~-~~~~~----  217 (255)
T PRK06841        156 ----------ERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEK---GERAK-KLIPA----  217 (255)
T ss_pred             ----------CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhH---HHHHH-hcCCC----
Confidence                      123469999999999999888764   8999999999998875322111111   11111 11111    


Q ss_pred             CCCeeeHHHHHHHHHHhhcCC
Q 020334          226 NISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~  246 (327)
                       ..+.+++|+++++++++...
T Consensus       218 -~~~~~~~~va~~~~~l~~~~  237 (255)
T PRK06841        218 -GRFAYPEEIAAAALFLASDA  237 (255)
T ss_pred             -CCCcCHHHHHHHHHHHcCcc
Confidence             26889999999999999764

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=1.4e-20  Score=158.78  Aligned_cols=210  Identities=16%  Similarity=0.106  Sum_probs=146.8

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEE-EcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTT-VRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-   77 (327)
                      |..++++||||||+|+||.+++++|+++|++|+++ +| ++...... ..+..   ...++.++.+|++|++++.++++ 
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~   76 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDI-NEEAAQELLEEIKE---EGGDAIAVKADVSSEEDVENLVEQ   76 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHH
Confidence            66778899999999999999999999999999988 88 43322221 22211   12468899999999998877664 


Q ss_pred             ------CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhcC---CccEEEEeccceeeeecCCCCCcc
Q 020334           78 ------GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKSG---TVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                            ++|+|||++|.....     ..+..++.+++|+.++.++++.+...-   ..+++|++||...+...       
T Consensus        77 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~-------  149 (247)
T PRK05565         77 IVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA-------  149 (247)
T ss_pred             HHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC-------
Confidence                  689999999875321     112234778999999888887776431   15689999997665311       


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                     +....|+.+|...+.+++.++++.   |++++++||+.+.++......+... ....  .  ...
T Consensus       150 ---------------~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~-~~~~--~--~~~  209 (247)
T PRK05565        150 ---------------SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDK-EGLA--E--EIP  209 (247)
T ss_pred             ---------------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHH-HHHH--h--cCC
Confidence                           123469999998888888877653   8999999999987765332111111 1111  1  111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                           ...+..++|++++++.++...
T Consensus       210 -----~~~~~~~~~va~~~~~l~~~~  230 (247)
T PRK05565        210 -----LGRLGKPEEIAKVVLFLASDD  230 (247)
T ss_pred             -----CCCCCCHHHHHHHHHHHcCCc
Confidence                 125779999999999998764

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.87  E-value=3.7e-20  Score=148.44  Aligned_cols=206  Identities=20%  Similarity=0.205  Sum_probs=148.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      .|.++|||||+.||.+.++.|++.|++|++..|    +.+.+..+...... ..+..+..|++|.+++.++++       
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aR----R~drL~~la~~~~~-~~~~~~~~DVtD~~~~~~~i~~~~~~~g   80 (246)
T COG4221           6 GKVALITGASSGIGEATARALAEAGAKVVLAAR----REERLEALADEIGA-GAALALALDVTDRAAVEAAIEALPEEFG   80 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEec----cHHHHHHHHHhhcc-CceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence            467999999999999999999999999999999    34444444333221 468889999999988665543       


Q ss_pred             CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|++||+||...      ...++|. .++++|+.|..+...+..    +.+ ..++|++||.+.-..            
T Consensus        81 ~iDiLvNNAGl~~g~~~~~~~~~dw~-~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~~------------  146 (246)
T COG4221          81 RIDILVNNAGLALGDPLDEADLDDWD-RMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRYP------------  146 (246)
T ss_pred             cccEEEecCCCCcCChhhhCCHHHHH-HHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEecccccccc------------
Confidence            6899999998654      2344666 999999999888877655    334 569999999764311            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCC-CCCchHHHHHHHHhCCcccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICP-KFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                -+..+.|+.+|+....+...+.++.   +++++.+-||.+-...... .+...-........        
T Consensus       147 ----------y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~--------  208 (246)
T COG4221         147 ----------YPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYK--------  208 (246)
T ss_pred             ----------CCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhc--------
Confidence                      1235579999999988888877664   8999999999885543211 11111101111011        


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCCCC
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPDAK  249 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~~~  249 (327)
                        ....+..+|+|+++.++++.|..-
T Consensus       209 --~~~~l~p~dIA~~V~~~~~~P~~v  232 (246)
T COG4221         209 --GGTALTPEDIAEAVLFAATQPQHV  232 (246)
T ss_pred             --cCCCCCHHHHHHHHHHHHhCCCcc
Confidence              125889999999999999998653

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=1.2e-20  Score=158.42  Aligned_cols=201  Identities=19%  Similarity=0.152  Sum_probs=145.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++++||||+|+||.+++++|+++|++|++++| ++..... ...+...   ..++.++.+|+++++++.++++      
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLAR-TEENLKAVAEEVEAY---GVKVVIATADVSDYEEVTAAIEQLKNEL   82 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHh---CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999999 4322221 2222211   2468889999999998887765      


Q ss_pred             -CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|+|||+++.....      .+++ .+.++.|+.++.++.+++..    .+ .+++|++||...+...          
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~----------  150 (239)
T PRK07666         83 GSIDILINNAGISKFGKFLELDPAEW-EKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQKGA----------  150 (239)
T ss_pred             CCccEEEEcCccccCCCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhccCC----------
Confidence             689999999864321      1222 37789999999888887764    23 5789999997755311          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                  .+...|+.+|...+.+++.++.+   .+++++++||+.+.++.....   .       ....      
T Consensus       151 ------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~---~-------~~~~------  202 (239)
T PRK07666        151 ------------AVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL---G-------LTDG------  202 (239)
T ss_pred             ------------CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc---c-------cccc------
Confidence                        22346999999999998887754   489999999999988742210   0       0000      


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCCCCceE
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPDAKGRY  252 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~~~~~y  252 (327)
                       ....++..+|+|+++..+++++  .++|
T Consensus       203 -~~~~~~~~~~~a~~~~~~l~~~--~~~~  228 (239)
T PRK07666        203 -NPDKVMQPEDLAEFIVAQLKLN--KRTF  228 (239)
T ss_pred             -CCCCCCCHHHHHHHHHHHHhCC--CceE
Confidence             1124678999999999999876  3454

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.87  E-value=6.4e-20  Score=153.54  Aligned_cols=196  Identities=21%  Similarity=0.153  Sum_probs=138.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------C
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------G   78 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~   78 (327)
                      .|+||||||+|+||.+++++|+++|++|++++|+.. ..             ...+++.+|++|.+++.++++      +
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~-~~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   68 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAI-DD-------------FPGELFACDLADIEQTAATLAQINEIHP   68 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcc-cc-------------cCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999999999432 21             012578899999998877665      5


Q ss_pred             CCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           79 CAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        79 ~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      +|+|||+|+.....      .+++ ...++.|+.++.++.+++.    +.+ .+++|++||...++ .            
T Consensus        69 ~d~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~-~------------  133 (234)
T PRK07577         69 VDAIVNNVGIALPQPLGKIDLAAL-QDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAIFG-A------------  133 (234)
T ss_pred             CcEEEECCCCCCCCChHHCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccccccC-C------------
Confidence            79999999875421      1223 3678889988877766554    344 67999999987653 1            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                                +....|+.+|...+.+++.++.+   .|++++++||+.+.++......+. ........... ...    
T Consensus       134 ----------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~-~~~~~~~~~~~-~~~----  197 (234)
T PRK07577        134 ----------LDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPV-GSEEEKRVLAS-IPM----  197 (234)
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCccccccccc-chhHHHHHhhc-CCC----
Confidence                      12346999999999998887754   389999999999988753221111 00111111111 111    


Q ss_pred             CCCeeeHHHHHHHHHHhhcCC
Q 020334          226 NISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~  246 (327)
                       ..+..++|++.+++.++..+
T Consensus       198 -~~~~~~~~~a~~~~~l~~~~  217 (234)
T PRK07577        198 -RRLGTPEEVAAAIAFLLSDD  217 (234)
T ss_pred             -CCCcCHHHHHHHHHHHhCcc
Confidence             13568899999999999764

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.87  E-value=1.5e-20  Score=158.65  Aligned_cols=209  Identities=17%  Similarity=0.150  Sum_probs=139.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      |+++|||||+|+||++++++|+++|++|+++.++++.... ....+...   ..++..+.+|+.|++++.++++      
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~~i~~~~~~~~~~~   77 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA---GGKAFVLQADISDENQVVAMFTAIDQHD   77 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC---CCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            3689999999999999999999999999875442432221 11222211   2357889999999998887665      


Q ss_pred             -CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHhcC------CccEEEEeccceeeeecCCCCCccc
Q 020334           78 -GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLKSG------TVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 -~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~~------~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                       ++|+|||+++.....      ..+.....++.|+.++..+++.+...-      ..++||++||...+...        
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~--------  149 (247)
T PRK09730         78 EPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA--------  149 (247)
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC--------
Confidence             468999999864211      111223778999999987776654421      13579999997654311        


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   ......|+.+|...+.+++.++.+   .+++++++||+.+|+|........  ..........  ++
T Consensus       150 -------------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~--~~~~~~~~~~--~~  212 (247)
T PRK09730        150 -------------PGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEP--GRVDRVKSNI--PM  212 (247)
T ss_pred             -------------CCcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCH--HHHHHHHhcC--CC
Confidence                         011235999999999998887754   389999999999999964321111  1111111111  11


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      .     ....++|+++++++++...
T Consensus       213 ~-----~~~~~~dva~~~~~~~~~~  232 (247)
T PRK09730        213 Q-----RGGQPEEVAQAIVWLLSDK  232 (247)
T ss_pred             C-----CCcCHHHHHHHHHhhcChh
Confidence            1     2347899999999998754

>PRK07985 oxidoreductase; Provisional

Probab=99.87  E-value=2.7e-20  Score=160.79  Aligned_cols=210  Identities=14%  Similarity=0.093  Sum_probs=145.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCC-CCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDP-EHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+++|||||+|+||.+++++|+++|++|++..|+.. .....+......  ...++.++.+|++|.+++.++++      
T Consensus        49 ~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         49 DRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEE--CGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHH--cCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            378999999999999999999999999998877322 122222221111  12457889999999988776654      


Q ss_pred             -CCCEEEEccCCCC-------CCCCchHHHHHHHHHhHHHHHHHHHHhc-CCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 -GCAGVIHVAAPID-------IDGKETEEVMTQRAVNGTIGILKSCLKS-GTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 -~~d~vih~a~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                       ++|++||+|+...       .+.+++. +.+++|+.++..+++++.+. ....+||++||...+...            
T Consensus       127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~------------  193 (294)
T PRK07985        127 GGLDIMALVAGKQVAIPDIADLTSEQFQ-KTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS------------  193 (294)
T ss_pred             CCCCEEEECCCCCcCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC------------
Confidence             5799999998532       1223343 78999999999999988753 113689999998766311            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                                +....|+.+|...+.+++.++.+   .|+++++++|+.+.+|........  ........ ...+..   
T Consensus       194 ----------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~--~~~~~~~~-~~~~~~---  257 (294)
T PRK07985        194 ----------PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT--QDKIPQFG-QQTPMK---  257 (294)
T ss_pred             ----------CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCC--HHHHHHHh-ccCCCC---
Confidence                      11346999999999999988876   489999999999999853211000  01111111 111111   


Q ss_pred             CCCeeeHHHHHHHHHHhhcCCC
Q 020334          226 NISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                        .+..++|+|+++++++....
T Consensus       258 --r~~~pedva~~~~fL~s~~~  277 (294)
T PRK07985        258 --RAGQPAELAPVYVYLASQES  277 (294)
T ss_pred             --CCCCHHHHHHHHHhhhChhc
Confidence              46789999999999997643

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.87  E-value=2.8e-20  Score=156.77  Aligned_cols=217  Identities=18%  Similarity=0.208  Sum_probs=147.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      |+++++||||+|+||.+++++|+++|++|++++|+........  .........++.++.+|+.|.+++.++++      
T Consensus         1 ~~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (245)
T PRK12824          1 MKKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDW--FEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE   78 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHH--HHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999432111111  11111112468899999999988877654      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHH----HHHhcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILK----SCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~----~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++||++|....      ..+.+ ...++.|+.++.++..    .+++.+ .++||++||...+...          
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~----------  146 (245)
T PRK12824         79 GPVDILVNNAGITRDSVFKRMSHQEW-NDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKGQ----------  146 (245)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccCC----------
Confidence             48999999986431      12233 3778899999888754    445544 6799999997655310          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                  .....|+.+|...+.+++.++.+   .++++++++|+.+.++..... ..   ......... .... 
T Consensus       147 ------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~-~~---~~~~~~~~~-~~~~-  208 (245)
T PRK12824        147 ------------FGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQM-GP---EVLQSIVNQ-IPMK-  208 (245)
T ss_pred             ------------CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc-CH---HHHHHHHhc-CCCC-
Confidence                        12346999999999888888754   389999999999988753321 11   111111111 1111 


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEec
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD---AKGRYICSS  256 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~  256 (327)
                          .+..++|+++++..++....   .+..+++.+
T Consensus       209 ----~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~  240 (245)
T PRK12824        209 ----RLGTPEEIAAAVAFLVSEAAGFITGETISING  240 (245)
T ss_pred             ----CCCCHHHHHHHHHHHcCccccCccCcEEEECC
Confidence                46688999999998886532   244666544

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.4e-20  Score=156.48  Aligned_cols=213  Identities=19%  Similarity=0.199  Sum_probs=144.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +++||||||+|+||++++++|+++|++|++++|+.. ..  .         ..++.++.+|+.|++.+.++++       
T Consensus         9 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~-~~--~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (260)
T PRK06523          9 GKRALVTGGTKGIGAATVARLLEAGARVVTTARSRP-DD--L---------PEGVEFVAADLTTAEGCAAVARAVLERLG   76 (260)
T ss_pred             CCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChh-hh--c---------CCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999322 11  0         1467889999999988775543       


Q ss_pred             CCCEEEEccCCCC--------CCCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 GCAGVIHVAAPID--------IDGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 ~~d~vih~a~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                      ++|+|||+||...        .+.+.+. ..+++|+.++..+.+++    ++.+ .+++|++||...+...         
T Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~---------  145 (260)
T PRK06523         77 GVDILVHVLGGSSAPAGGFAALTDEEWQ-DELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRLPL---------  145 (260)
T ss_pred             CCCEEEECCcccccCCCCcccCCHHHHH-HHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccCCC---------
Confidence            5799999998532        1122333 77899999987776554    3444 5689999997654210         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC-------chHHHHHHHH-
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFA-------GSVRSTLAMV-  214 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~-------~~~~~~~~~~-  214 (327)
                                  ..+...|+.+|...+.+++.++.++   |+++++++|+.+.+|.......       .........+ 
T Consensus       146 ------------~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (260)
T PRK06523        146 ------------PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIM  213 (260)
T ss_pred             ------------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHH
Confidence                        0124579999999999999888654   7999999999999885321000       0000000000 


Q ss_pred             h-CCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          215 L-GNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       215 ~-~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      . ....+.     ..+..++|+++++.+++....   .+..+.+.+.
T Consensus       214 ~~~~~~p~-----~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg  255 (260)
T PRK06523        214 DSLGGIPL-----GRPAEPEEVAELIAFLASDRAASITGTEYVIDGG  255 (260)
T ss_pred             HHhccCcc-----CCCCCHHHHHHHHHHHhCcccccccCceEEecCC
Confidence            0 001111     146688999999999997532   2335666543

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.87  E-value=3.7e-20  Score=162.32  Aligned_cols=190  Identities=18%  Similarity=0.138  Sum_probs=127.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      ++++++||||+|+||.+++++|+++|++|++++| +...... ...+..   ...++.++.+|++|.+++.++++     
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACR-NLKKAEAAAQELGI---PPDSYTIIHIDLGDLDSVRRFVDDFRAL   80 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHhhc---cCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999 4332222 122211   12468899999999998877664     


Q ss_pred             --CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHHhc----CC-ccEEEEeccceeeeecCCCCCcc
Q 020334           78 --GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCLKS----GT-VKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 --~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~-~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                        ++|+|||+||....       +.+.+ ...+++|+.++..+++++.+.    +. ..++|++||...++.......+.
T Consensus        81 ~~~iD~li~nAg~~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~  159 (322)
T PRK07453         81 GKPLDALVCNAAVYMPLLKEPLRSPQGY-ELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPI  159 (322)
T ss_pred             CCCccEEEECCcccCCCCCCCCCCHHHH-HHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCC
Confidence              48999999986431       11223 377899999998888776642    21 25999999987653110000001


Q ss_pred             ----cCCCCCChh--H-------hhhcCCCchhhHhhhHHHHHHHHHHHHHc----CCcEEEEecCceecCC
Q 020334          144 ----DETFWSDED--Y-------IRKLDIWGKSYVLTKTLTERAALEFAEEH----GLDLVTLIPSFVVGPF  198 (327)
Q Consensus       144 ----~E~~~~~~~--~-------~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~R~~~v~G~~  198 (327)
                          +.++.....  .       ......|...|+.||...+.+++.+++++    |++++.+|||.|++..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  231 (322)
T PRK07453        160 PAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP  231 (322)
T ss_pred             CCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence                100000000  0       00001345689999999888888887764    7999999999998754

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=2.6e-20  Score=157.69  Aligned_cols=219  Identities=15%  Similarity=0.169  Sum_probs=149.3

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |....+++|||||+|+||.++++.|+++|++|++++| +..... ....+...   ..++.++.+|++|.+++.++++  
T Consensus         1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   76 (253)
T PRK08217          1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDL-NQEKLEEAVAECGAL---GTEVRGYAANVTDEEDVEATFAQI   76 (253)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHHHHHH
Confidence            5444689999999999999999999999999999999 432221 11222211   2467889999999888766554  


Q ss_pred             -----CCCEEEEccCCCCC---------------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceee
Q 020334           78 -----GCAGVIHVAAPIDI---------------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTV  133 (327)
Q Consensus        78 -----~~d~vih~a~~~~~---------------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~  133 (327)
                           .+|+|||+||....               +.+.+ ...++.|+.++..+.+.+.    +......++++||...+
T Consensus        77 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~  155 (253)
T PRK08217         77 AEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQF-QSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARA  155 (253)
T ss_pred             HHHcCCCCEEEECCCccCcCcccccccccccccCCHHHH-HHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc
Confidence                 47999999985321               11122 3677899999887765443    22213579999997665


Q ss_pred             eecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHH
Q 020334          134 YFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRST  210 (327)
Q Consensus       134 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~  210 (327)
                      +.                       .+...|+.+|...+.+++.++++   .+++++.++|+.+.++......+    ..
T Consensus       156 ~~-----------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~----~~  208 (253)
T PRK08217        156 GN-----------------------MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKP----EA  208 (253)
T ss_pred             CC-----------------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCH----HH
Confidence            31                       22456999999999999988765   48999999999998875432111    11


Q ss_pred             HHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 020334          211 LAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKG-RYICSSA  257 (327)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~  257 (327)
                      ....... .+.     ..+.+++|+++++..++......| +|++.+.
T Consensus       209 ~~~~~~~-~~~-----~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~gg  250 (253)
T PRK08217        209 LERLEKM-IPV-----GRLGEPEEIAHTVRFIIENDYVTGRVLEIDGG  250 (253)
T ss_pred             HHHHHhc-CCc-----CCCcCHHHHHHHHHHHHcCCCcCCcEEEeCCC
Confidence            1111111 111     157799999999999997654334 6666543

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.4e-20  Score=156.48  Aligned_cols=210  Identities=17%  Similarity=0.115  Sum_probs=143.6

Q ss_pred             CCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            2 EEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      ...+++++||||+|+||.+++++|++.|++|++++| ++.....+ ..+...   ..++.++.+|++|++++.++++   
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   78 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGAR-RQAELDQLVAEIRAE---GGEAVALAGDVRDEAYAKALVALAV   78 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            334579999999999999999999999999999999 43332222 222221   2467889999999998877664   


Q ss_pred             ----CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHH----HHhcCCccEEEEeccceeeeecCCCCCc
Q 020334           78 ----GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKS----CLKSGTVKRFVYTSSGSTVYFSGKDVDM  142 (327)
Q Consensus        78 ----~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~v~~~~~~~~~~  142 (327)
                          ++|++||+||....       +.+++ ...+++|+.++..+.++    +++.+ .+++|++||...+..+      
T Consensus        79 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~~------  150 (254)
T PRK07478         79 ERFGGLDIAFNNAGTLGEMGPVAEMSLEGW-RETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTAG------  150 (254)
T ss_pred             HhcCCCCEEEECCCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhccC------
Confidence                68999999986431       11223 47799999877766554    44444 5689999997654211      


Q ss_pred             ccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcc
Q 020334          143 LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNRE  219 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (327)
                                     .+....|+.+|...+.+++.++.++   |++++.++||.+-.+..... ... .......... .
T Consensus       151 ---------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~-~~~~~~~~~~-~  212 (254)
T PRK07478        151 ---------------FPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAM-GDT-PEALAFVAGL-H  212 (254)
T ss_pred             ---------------CCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccc-cCC-HHHHHHHHhc-C
Confidence                           1224569999999999999988764   79999999999977732211 110 0111111111 1


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      +.     ..+..++|+++++++++...
T Consensus       213 ~~-----~~~~~~~~va~~~~~l~s~~  234 (254)
T PRK07478        213 AL-----KRMAQPEEIAQAALFLASDA  234 (254)
T ss_pred             CC-----CCCcCHHHHHHHHHHHcCch
Confidence            11     14678999999999998754

>PRK12743 oxidoreductase; Provisional

Probab=99.86  E-value=3.5e-20  Score=157.25  Aligned_cols=218  Identities=17%  Similarity=0.098  Sum_probs=149.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      |++++|||||+|+||.+++++|+++|++|+++.+++....... ..+...   ..++.++.+|++|++++.++++     
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH---GVRAEIRQLDLSDLPEGAQALDKLIQR   77 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999988877343322222 222211   2468899999999988776654     


Q ss_pred             --CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        .+|+|||++|.....      .+.+ .+.+++|+.++..+++++.+.    +..+++|++||.....       +   
T Consensus        78 ~~~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~-------~---  146 (256)
T PRK12743         78 LGRIDVLVNNAGAMTKAPFLDMDFDEW-RKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT-------P---  146 (256)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC-------C---
Confidence              579999999864421      1223 377899999999999877653    1135899999964321       0   


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  ..+...|+.+|...+.+++.++.++   +++++.++||.+.+|..... ....   ..... ...+..
T Consensus       147 ------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~---~~~~~-~~~~~~  209 (256)
T PRK12743        147 ------------LPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD-DSDV---KPDSR-PGIPLG  209 (256)
T ss_pred             ------------CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc-ChHH---HHHHH-hcCCCC
Confidence                        1234579999999999998887654   79999999999998853321 1111   11111 111111


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                           .+.+++|++.++.+++....  ..| ++.+.+.
T Consensus       210 -----~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  242 (256)
T PRK12743        210 -----RPGDTHEIASLVAWLCSEGASYTTGQSLIVDGG  242 (256)
T ss_pred             -----CCCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence                 35689999999999987543  234 3445443

>PRK06196 oxidoreductase; Provisional

Probab=99.86  E-value=4.2e-20  Score=161.36  Aligned_cols=218  Identities=17%  Similarity=0.098  Sum_probs=141.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++|+||||+|+||.+++++|+++|++|++++| ++..... ...+       .++.++.+|++|.+++.++++      
T Consensus        26 ~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R-~~~~~~~~~~~l-------~~v~~~~~Dl~d~~~v~~~~~~~~~~~   97 (315)
T PRK06196         26 GKTAIVTGGYSGLGLETTRALAQAGAHVIVPAR-RPDVAREALAGI-------DGVEVVMLDLADLESVRAFAERFLDSG   97 (315)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHh-------hhCeEEEccCCCHHHHHHHHHHHHhcC
Confidence            578999999999999999999999999999999 4322221 1111       247889999999998877663      


Q ss_pred             -CCCEEEEccCCCCC----CCCchHHHHHHHHHhHHHHHHH----HHHhcCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 -GCAGVIHVAAPIDI----DGKETEEVMTQRAVNGTIGILK----SCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 -~~d~vih~a~~~~~----~~~~~~~~~~~~nv~~~~~l~~----~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                       ++|+|||+||....    ..+.+. ..+++|+.++..+.+    .+++.+ ..++|++||.......      ...++.
T Consensus        98 ~~iD~li~nAg~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~------~~~~~~  169 (315)
T PRK06196         98 RRIDILINNAGVMACPETRVGDGWE-AQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSP------IRWDDP  169 (315)
T ss_pred             CCCCEEEECCCCCCCCCccCCccHH-HHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCC------CCcccc
Confidence             58999999986431    122333 778999999666555    444444 4799999997543211      111110


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                      ...    ....+...|+.||...+.+.+.++++   .|+++++++||.+.+|............ ..........+.   
T Consensus       170 ~~~----~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~---  241 (315)
T PRK06196        170 HFT----RGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVA-LGWVDEHGNPID---  241 (315)
T ss_pred             Ccc----CCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhh-hhhhhhhhhhhh---
Confidence            000    00123467999999999999888765   3899999999999998643211100000 000000000000   


Q ss_pred             CCCeeeHHHHHHHHHHhhcCCC
Q 020334          226 NISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                       ..+..++|+|..+++++..+.
T Consensus       242 -~~~~~~~~~a~~~~~l~~~~~  262 (315)
T PRK06196        242 -PGFKTPAQGAATQVWAATSPQ  262 (315)
T ss_pred             -hhcCCHhHHHHHHHHHhcCCc
Confidence             024578999999999987543

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.86  E-value=7.4e-20  Score=155.15  Aligned_cols=218  Identities=11%  Similarity=0.072  Sum_probs=149.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+++||||||+|+||.++++.|+++|++|++++| .......+ ..+...   ..++.++.+|++|.+++.+++.     
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~   85 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDI-NADAANHVVDEIQQL---GGQAFACRCDITSEQELSALADFALSK   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999998 33222222 222211   2367888999999998876553     


Q ss_pred             --CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 --GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 --~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                        ++|++||+||.....     .+.+ ...+++|+.++.++++++...   .+..++|++||..... +           
T Consensus        86 ~~~~d~li~~ag~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-~-----------  152 (255)
T PRK06113         86 LGKVDILVNNAGGGGPKPFDMPMADF-RRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-K-----------  152 (255)
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHH-HHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC-C-----------
Confidence              579999999864321     1223 366899999999999988632   1145999999965431 0           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                ..+...|+.+|...+.+++.++.+.   +++++++.|+.+..+.......   ......... ...+.  
T Consensus       153 ----------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~---~~~~~~~~~-~~~~~--  216 (255)
T PRK06113        153 ----------NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT---PEIEQKMLQ-HTPIR--  216 (255)
T ss_pred             ----------CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccC---HHHHHHHHh-cCCCC--
Confidence                      1224569999999999999987653   7999999999988774322111   111111111 11121  


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          225 LNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                         .+..++|+++++++++....   .+..+++.++
T Consensus       217 ---~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg  249 (255)
T PRK06113        217 ---RLGQPQDIANAALFLCSPAASWVSGQILTVSGG  249 (255)
T ss_pred             ---CCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence               47799999999999997542   2335566543

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=6.5e-20  Score=153.58  Aligned_cols=204  Identities=17%  Similarity=0.151  Sum_probs=144.2

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh-hHHHHHhcCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP-ESFDAAIAGC   79 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~   79 (327)
                      |..++++++||||+|+||.++++.|+++|++|++++|+ +....           ..++.++.+|+.++ +.+.+.+.++
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~-~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~i   68 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQ-DKPDL-----------SGNFHFLQLDLSDDLEPLFDWVPSV   68 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCC-ccccc-----------CCcEEEEECChHHHHHHHHHhhCCC
Confidence            66667899999999999999999999999999999993 22110           14678899999987 4444445578


Q ss_pred             CEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           80 AGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        80 d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                      |+|||+||....      ...+...+.+++|+.++.++++++...   .+.+++|++||...+...              
T Consensus        69 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------  134 (235)
T PRK06550         69 DILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG--------------  134 (235)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC--------------
Confidence            999999985321      111223477999999999998887642   114689999997654211              


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCC
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNI  227 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (327)
                              +....|+.+|...+.+++.++.++   |+++++++|+.+.++.....+...  ........ ..+.     .
T Consensus       135 --------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~--~~~~~~~~-~~~~-----~  198 (235)
T PRK06550        135 --------GGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPG--GLADWVAR-ETPI-----K  198 (235)
T ss_pred             --------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCch--HHHHHHhc-cCCc-----C
Confidence                    123469999999999988888765   899999999999888543222211  11111111 1111     2


Q ss_pred             CeeeHHHHHHHHHHhhcCC
Q 020334          228 SMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       228 ~~i~v~D~a~~~~~~~~~~  246 (327)
                      .+...+|+|+++++++...
T Consensus       199 ~~~~~~~~a~~~~~l~s~~  217 (235)
T PRK06550        199 RWAEPEEVAELTLFLASGK  217 (235)
T ss_pred             CCCCHHHHHHHHHHHcChh
Confidence            5778999999999999654

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.2e-20  Score=158.31  Aligned_cols=199  Identities=21%  Similarity=0.125  Sum_probs=142.0

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |..++++||||||||+||.+++++|+++|++|++.+| +++........  .    .++.++.+|++|++++.++++   
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r-~~~~~~~~~~~--~----~~~~~~~~D~~~~~~~~~~~~~~~   73 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDL-DEALAKETAAE--L----GLVVGGPLDVTDPASFAAFLDAVE   73 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHH--h----ccceEEEccCCCHHHHHHHHHHHH
Confidence            5555789999999999999999999999999999999 43332221111  0    247889999999998766553   


Q ss_pred             ----CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 ----GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                          ++|++||+||.....     ..+...+.+++|+.++..+.+.+.    +.+ .++||++||...+..         
T Consensus        74 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~---------  143 (273)
T PRK07825         74 ADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIP---------  143 (273)
T ss_pred             HHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCC---------
Confidence                579999999864421     112234778999998888776654    344 579999999765421         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .+....|+.+|...+.+.+.+..+   .|+++++++|+.+-.+.....            ..     
T Consensus       144 -------------~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~------------~~-----  193 (273)
T PRK07825        144 -------------VPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT------------GG-----  193 (273)
T ss_pred             -------------CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc------------cc-----
Confidence                         122456999999888877776654   489999999998765532110            00     


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCCC
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPDA  248 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~~  248 (327)
                        .....++.++|+|++++.++.++..
T Consensus       194 --~~~~~~~~~~~va~~~~~~l~~~~~  218 (273)
T PRK07825        194 --AKGFKNVEPEDVAAAIVGTVAKPRP  218 (273)
T ss_pred             --ccCCCCCCHHHHHHHHHHHHhCCCC
Confidence              0112578999999999999987643

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.86  E-value=9e-20  Score=154.40  Aligned_cols=221  Identities=17%  Similarity=0.163  Sum_probs=148.9

Q ss_pred             CCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            2 EEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      .++++++|||||+|+||.+++++|+++|++|++++| +...... ...+...   ..++.++.+|+.|.+++.++++   
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   80 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSR-KLDGCQAVADAIVAA---GGKAEALACHIGEMEQIDALFAHIR   80 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            334688999999999999999999999999999999 4322222 2222211   2357889999999988776654   


Q ss_pred             ----CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 ----GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ----~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                          ++|++||+|+....      ...+.....++.|+.++..+++++.    +.+ ..+++++||...+..        
T Consensus        81 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~--------  151 (252)
T PRK07035         81 ERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSP--------  151 (252)
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcCC--------
Confidence                57999999985321      1112223678999999887776663    333 579999999654320        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    .++...|+.+|...+.+++.++.++   |++++.+.||.+..+.........  ........ ..+
T Consensus       152 --------------~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~--~~~~~~~~-~~~  214 (252)
T PRK07035        152 --------------GDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKND--AILKQALA-HIP  214 (252)
T ss_pred             --------------CCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCH--HHHHHHHc-cCC
Confidence                          1224569999999999999998764   899999999998776432211110  11111111 111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPDA--KG-RYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~~  257 (327)
                      .     ..+..++|+|+++.+++.....  .| .+++.++
T Consensus       215 ~-----~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        215 L-----RRHAEPSEMAGAVLYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             C-----CCcCCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            1     1467899999999999876532  33 4455544

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.86  E-value=3.6e-20  Score=157.04  Aligned_cols=207  Identities=12%  Similarity=0.067  Sum_probs=145.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++++|||||+|+||.+++++|+++|++|++++| ++..... ...+...   ..++.++.+|++|.+++.+++.      
T Consensus         9 ~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r-~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          9 GKNILITGSAQGIGFLLATGLAEYGAEIIINDI-TAERAELAVAKLRQE---GIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcC-CHHHHHHHHHHHHhc---CCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999999 4322222 2222211   2357788999999998877664      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                       ++|+|||+||....      ..+++ .+.+++|+.++..+++++.+.   ...++||++||..... +           
T Consensus        85 ~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-~-----------  151 (254)
T PRK08085         85 GPIDVLINNAGIQRRHPFTEFPEQEW-NDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL-G-----------  151 (254)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc-C-----------
Confidence             47999999986431      12233 378999999988888876643   1256899999965331 1           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                .++...|+.+|...+.+++.++.++   |++++.++||.+.++........  ........ ...+.   
T Consensus       152 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~--~~~~~~~~-~~~p~---  215 (254)
T PRK08085        152 ----------RDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED--EAFTAWLC-KRTPA---  215 (254)
T ss_pred             ----------CCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC--HHHHHHHH-hcCCC---
Confidence                      1224469999999999999988664   89999999999998853321110  11111111 11122   


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCC
Q 020334          225 LNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                        ..+...+|+++++.+++...
T Consensus       216 --~~~~~~~~va~~~~~l~~~~  235 (254)
T PRK08085        216 --ARWGDPQELIGAAVFLSSKA  235 (254)
T ss_pred             --CCCcCHHHHHHHHHHHhCcc
Confidence              25788999999999999753

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.86  E-value=7.2e-20  Score=155.53  Aligned_cols=207  Identities=17%  Similarity=0.192  Sum_probs=144.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .++++|||||+|+||.+++++|++.|++|++++|+  .....+......  ...++.++.+|+++.+++.++++      
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   89 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG--TNWDETRRLIEK--EGRKVTFVQVDLTKPESAEKVVKEALEEF   89 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC--cHHHHHHHHHHh--cCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35889999999999999999999999999999994  222222222111  12468899999999998877665      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       .+|++||+||....      ..+++ ...+++|+.++..+.+++.    +.+ .+++|++||...+...          
T Consensus        90 g~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----------  157 (258)
T PRK06935         90 GKIDILVNNAGTIRRAPLLEYKDEDW-NAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGG----------  157 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHH-HHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccCC----------
Confidence             57999999986431      12233 3778899999877776554    333 5799999998765311          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                  +....|+.+|...+.+++.+++++   |+++++++||.+..+........  ......... ..+.  
T Consensus       158 ------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~-~~~~--  220 (258)
T PRK06935        158 ------------KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD--KNRNDEILK-RIPA--  220 (258)
T ss_pred             ------------CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC--hHHHHHHHh-cCCC--
Confidence                        123469999999999999998764   79999999999988753211110  001111111 1111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCC
Q 020334          224 LLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                         ..+..++|+++++.+++...
T Consensus       221 ---~~~~~~~dva~~~~~l~s~~  240 (258)
T PRK06935        221 ---GRWGEPDDLMGAAVFLASRA  240 (258)
T ss_pred             ---CCCCCHHHHHHHHHHHcChh
Confidence               25788899999999998754

>PRK08643 acetoin reductase; Validated

Probab=99.86  E-value=5e-20  Score=156.33  Aligned_cols=211  Identities=18%  Similarity=0.139  Sum_probs=142.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      |+|++|||||+|+||.++++.|+++|++|++++| ++...... ..+...   ..++.++.+|++|++.+.++++     
T Consensus         1 ~~k~~lItGas~giG~~la~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~   76 (256)
T PRK08643          1 MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDY-NEETAQAAADKLSKD---GGKAIAVKADVSDRDQVFAAVRQVVDT   76 (256)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999 43322222 222211   2467889999999998777664     


Q ss_pred             --CCCEEEEccCCCCCCC-----CchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 --GCAGVIHVAAPIDIDG-----KETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 --~~d~vih~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                        ++|+||||||......     .+.....+++|+.++..+++.+.+.    +...++|++||...+...          
T Consensus        77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------  146 (256)
T PRK08643         77 FGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN----------  146 (256)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC----------
Confidence              5899999998643211     1122367889999987776665532    223589999997654211          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC-------CchHHHHHHHHhC
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKF-------AGSVRSTLAMVLG  216 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~-------~~~~~~~~~~~~~  216 (327)
                                  +....|+.+|...+.+++.++.+   .|++++.++|+.+.+|......       .............
T Consensus       147 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (256)
T PRK08643        147 ------------PELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAK  214 (256)
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhc
Confidence                        12346999999999998888765   3899999999999887421100       0000000000111


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                       ....     ..+..++|+++++.+++...
T Consensus       215 -~~~~-----~~~~~~~~va~~~~~L~~~~  238 (256)
T PRK08643        215 -DITL-----GRLSEPEDVANCVSFLAGPD  238 (256)
T ss_pred             -cCCC-----CCCcCHHHHHHHHHHHhCcc
Confidence             1111     14678999999999998754

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.2e-20  Score=158.00  Aligned_cols=207  Identities=15%  Similarity=0.084  Sum_probs=142.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------C
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------G   78 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   78 (327)
                      |+|+||||+|+||.+++++|+++|++|++++|+..........+...   ..++.++.+|+.|++++.++++       +
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   77 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA---GGDGFYQRCDVRDYSQLTALAQACEEKWGG   77 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            47999999999999999999999999999999332212222222221   3467889999999988877664       5


Q ss_pred             CCEEEEccCCCCCC---CC--chHHHHHHHHHhHHHHHHHH----HHhcCCccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           79 CAGVIHVAAPIDID---GK--ETEEVMTQRAVNGTIGILKS----CLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        79 ~d~vih~a~~~~~~---~~--~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                      +|+|||+||.....   ..  +..++.+++|+.++..+.+.    +++.+ ..++|++||...+...             
T Consensus        78 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~-------------  143 (270)
T PRK05650         78 IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQG-------------  143 (270)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCCC-------------
Confidence            89999999865421   11  11235688998887776665    44444 6799999997655311             


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                               +....|+.+|...+.+.+.++.+.   |+++++++|+.+.++........ ...........       ..
T Consensus       144 ---------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~-------~~  206 (270)
T PRK05650        144 ---------PAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGP-NPAMKAQVGKL-------LE  206 (270)
T ss_pred             ---------CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccC-chhHHHHHHHH-------hh
Confidence                     224579999999888888887764   89999999999988754321111 11111110000       01


Q ss_pred             CCeeeHHHHHHHHHHhhcCC
Q 020334          227 ISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~  246 (327)
                      ..+++++|+|+.++.+++++
T Consensus       207 ~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        207 KSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             cCCCCHHHHHHHHHHHHhCC
Confidence            14689999999999999874

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.86  E-value=4.6e-20  Score=155.80  Aligned_cols=211  Identities=15%  Similarity=0.106  Sum_probs=140.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      |+|+||||||+|+||.+++++|+++|++|+++.+++++..... ..+...   ..++.++.+|++|++++.++++     
T Consensus         1 m~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (248)
T PRK06947          1 MRKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA---GGRACVVAGDVANEADVIAMFDAVQSA   77 (248)
T ss_pred             CCcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCcEEEEEeccCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999987765343332222 222211   2468899999999988776553     


Q ss_pred             --CCCEEEEccCCCCC----C--CCchHHHHHHHHHhHHHHHHHHHHhc-C-----CccEEEEeccceeeeecCCCCCcc
Q 020334           78 --GCAGVIHVAAPIDI----D--GKETEEVMTQRAVNGTIGILKSCLKS-G-----TVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 --~~d~vih~a~~~~~----~--~~~~~~~~~~~nv~~~~~l~~~~~~~-~-----~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                        ++|+|||+||....    .  ..+.....+++|+.++..+++.+.+. .     +..+||++||...+... .     
T Consensus        78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~-~-----  151 (248)
T PRK06947         78 FGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGS-P-----  151 (248)
T ss_pred             cCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCC-C-----
Confidence              58999999986431    1  11112366899999988887544432 1     12469999997654211 0     


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                     .....|+.+|...+.+++.+++++   +++++++|||.+..|...... . . ....... ...+
T Consensus       152 ---------------~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~-~-~-~~~~~~~-~~~~  212 (248)
T PRK06947        152 ---------------NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGG-Q-P-GRAARLG-AQTP  212 (248)
T ss_pred             ---------------CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccC-C-H-HHHHHHh-hcCC
Confidence                           112359999999999999888764   799999999999988532110 0 0 1111111 1111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                      ..     ....++|+++++++++....
T Consensus       213 ~~-----~~~~~e~va~~~~~l~~~~~  234 (248)
T PRK06947        213 LG-----RAGEADEVAETIVWLLSDAA  234 (248)
T ss_pred             CC-----CCcCHHHHHHHHHHHcCccc
Confidence            11     35678999999999988753

>PRK06398 aldose dehydrogenase; Validated

Probab=99.86  E-value=1.2e-19  Score=154.07  Aligned_cols=199  Identities=18%  Similarity=0.156  Sum_probs=141.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      ++++|||||+|+||.+++++|+++|++|++++|+.. ..             .++.++.+|++|++++.++++       
T Consensus         6 gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~-~~-------------~~~~~~~~D~~~~~~i~~~~~~~~~~~~   71 (258)
T PRK06398          6 DKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP-SY-------------NDVDYFKVDVSNKEQVIKGIDYVISKYG   71 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcc-cc-------------CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999999999999999332 11             257889999999998877664       


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      ++|++||+||....      ..+++ ...+++|+.++..+++++.+.   ....++|++||...+..             
T Consensus        72 ~id~li~~Ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  137 (258)
T PRK06398         72 RIDILVNNAGIESYGAIHAVEEDEW-DRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV-------------  137 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC-------------
Confidence            58999999986431      11223 367899999998887776542   12579999999766531             


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCC-------CchHHHHHHHHhCCcc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKF-------AGSVRSTLAMVLGNRE  219 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~-------~~~~~~~~~~~~~~~~  219 (327)
                               .++...|+.+|...+.+.+.++.++  +++++.++||.+-.+......       +.......... ....
T Consensus       138 ---------~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  207 (258)
T PRK06398        138 ---------TRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREW-GEMH  207 (258)
T ss_pred             ---------CCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhh-hhcC
Confidence                     1224579999999999999998775  489999999988776321100       00000001111 0111


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      +.     ..+..++|+|+++++++...
T Consensus       208 ~~-----~~~~~p~eva~~~~~l~s~~  229 (258)
T PRK06398        208 PM-----KRVGKPEEVAYVVAFLASDL  229 (258)
T ss_pred             Cc-----CCCcCHHHHHHHHHHHcCcc
Confidence            11     25678999999999998754

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.86  E-value=9.8e-20  Score=154.52  Aligned_cols=209  Identities=15%  Similarity=0.112  Sum_probs=146.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+++|+||||+|+||++++++|+++|++|++++| +++.... ...+...   ..++.++.+|++|++++.++++     
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGR-NAATLEAAVAALRAA---GGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeC-CHHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999 4322221 1222211   2468899999999998877664     


Q ss_pred             --CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 --GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 --~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                        ++|+|||+++.....     ..+...+.++.|+.++..+.+.+.+    .+ .+++|++||...+...          
T Consensus        86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~----------  154 (256)
T PRK06124         86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVAR----------  154 (256)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccCC----------
Confidence              469999999864321     1122236789999999888866643    44 6799999997644210          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                  +....|+.+|...+.+++.++.+.   +++++.++|+.+.++........  ......... ....  
T Consensus       155 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~--~~~~~~~~~-~~~~--  217 (256)
T PRK06124        155 ------------AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAAD--PAVGPWLAQ-RTPL--  217 (256)
T ss_pred             ------------CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccC--hHHHHHHHh-cCCC--
Confidence                        113469999999999988877653   79999999999999853221111  111111111 1111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                         ..+++++|+++++++++..+.
T Consensus       218 ---~~~~~~~~~a~~~~~l~~~~~  238 (256)
T PRK06124        218 ---GRWGRPEEIAGAAVFLASPAA  238 (256)
T ss_pred             ---CCCCCHHHHHHHHHHHcCccc
Confidence               258899999999999998753

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.8e-20  Score=158.01  Aligned_cols=213  Identities=16%  Similarity=0.139  Sum_probs=139.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-CCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-GCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~v   82 (327)
                      |+++||||||||+||++++++|+++|++|++++| ++.....+......  ...++.++.+|++|++++.+++. ++|+|
T Consensus         1 m~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~id~v   77 (257)
T PRK09291          1 MSKTILITGAGSGFGREVALRLARKGHNVIAGVQ-IAPQVTALRAEAAR--RGLALRVEKLDLTDAIDRAQAAEWDVDVL   77 (257)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh--cCCcceEEEeeCCCHHHHHHHhcCCCCEE
Confidence            4578999999999999999999999999999999 43322222221111  12368889999999999988877 89999


Q ss_pred             EEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHH----HHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhH
Q 020334           83 IHVAAPIDID-----GKETEEVMTQRAVNGTIGILKS----CLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDY  153 (327)
Q Consensus        83 ih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~  153 (327)
                      ||||+.....     ..+.....+++|+.++..+.+.    +++.+ .++||++||...+. .                 
T Consensus        78 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~-~-----------------  138 (257)
T PRK09291         78 LNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLI-T-----------------  138 (257)
T ss_pred             EECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhcc-C-----------------
Confidence            9999865321     1112236788899887766554    44445 57999999975432 0                 


Q ss_pred             hhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc--ccccc-ccCC
Q 020334          154 IRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR--EEYSI-LLNI  227 (327)
Q Consensus       154 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~  227 (327)
                          .+....|+.+|...|.+++.+..+   .|++++++||+.+..+...........+    .....  ..... ....
T Consensus       139 ----~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  210 (257)
T PRK09291        139 ----GPFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRW----YDPARNFTDPEDLAFPL  210 (257)
T ss_pred             ----CCCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhh----cchhhHHHhhhhhhccc
Confidence                022346999999999988877654   4899999999977543211100000000    00000  00000 0112


Q ss_pred             CeeeHHHHHHHHHHhhcCC
Q 020334          228 SMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       228 ~~i~v~D~a~~~~~~~~~~  246 (327)
                      .+...+|+++.++.++..+
T Consensus       211 ~~~~~~~~~~~~~~~l~~~  229 (257)
T PRK09291        211 EQFDPQEMIDAMVEVIPAD  229 (257)
T ss_pred             cCCCHHHHHHHHHHHhcCC
Confidence            4578889988888877654

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.8e-20  Score=156.99  Aligned_cols=207  Identities=14%  Similarity=0.070  Sum_probs=144.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++++|||||+|+||.+++++|+++|++|++++| +++....+ ..+...   ..++.++.+|++|++++.++++      
T Consensus        10 ~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814         10 DQVAVVTGAGRGLGAAIALAFAEAGADVLIAAR-TESQLDEVAEQIRAA---GRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999 43332222 122111   2467889999999998876654      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|+|||+|+....      ..+.+ ...+++|+.++.++++++.+.    ...+++|++||..... +          
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~-~----------  153 (263)
T PRK07814         86 GRLDIVVNNVGGTMPNPLLSTSTKDL-ADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL-A----------  153 (263)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHH-HHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC-C----------
Confidence             68999999985321      11223 478899999999999998742    2257899999964331 0          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                 ..+.++|+.+|...+.+++.++.+.  +++++.++|+.+..+........  ..+.....+. ...   
T Consensus       154 -----------~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~~~-~~~---  216 (263)
T PRK07814        154 -----------GRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAAN--DELRAPMEKA-TPL---  216 (263)
T ss_pred             -----------CCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCC--HHHHHHHHhc-CCC---
Confidence                       1234579999999999999988765  57889999998876632211000  0111111111 111   


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCC
Q 020334          225 LNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                        ..+..++|+++++++++...
T Consensus       217 --~~~~~~~~va~~~~~l~~~~  236 (263)
T PRK07814        217 --RRLGDPEDIAAAAVYLASPA  236 (263)
T ss_pred             --CCCcCHHHHHHHHHHHcCcc
Confidence              14678999999999998753

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.8e-19  Score=152.72  Aligned_cols=208  Identities=16%  Similarity=0.196  Sum_probs=143.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+++|||||+|+||++++++|++.|++|++++|+.+.... ....+...   ..++.++.+|++|++++.++++      
T Consensus         8 ~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~   84 (254)
T PRK06114          8 GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA---GRRAIQIAADVTSKADLRAAVARTEAEL   84 (254)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999994332211 12222221   2467889999999988877664      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++|||||....      ..+++ .+.+++|+.++..+++++.    +.+ .+++|++||...+... .        
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-~--------  153 (254)
T PRK06114         85 GALTLAVNAAGIANANPAEEMEEEQW-QTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVN-R--------  153 (254)
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHH-HHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCC-C--------
Confidence             47999999986542      12233 3778999999977766654    333 5699999997644211 0        


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 ..+...|+.+|...+.+++.++.+   .|+++++++||.+.++....  +... ....... ...+.. 
T Consensus       154 -----------~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~--~~~~-~~~~~~~-~~~p~~-  217 (254)
T PRK06114        154 -----------GLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTR--PEMV-HQTKLFE-EQTPMQ-  217 (254)
T ss_pred             -----------CCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccc--ccch-HHHHHHH-hcCCCC-
Confidence                       011346999999999999888765   38999999999998875321  1111 1111111 111121 


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCC
Q 020334          224 LLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                          .+..++|+++++++++...
T Consensus       218 ----r~~~~~dva~~~~~l~s~~  236 (254)
T PRK06114        218 ----RMAKVDEMVGPAVFLLSDA  236 (254)
T ss_pred             ----CCcCHHHHHHHHHHHcCcc
Confidence                4678999999999998753

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.7e-20  Score=155.03  Aligned_cols=200  Identities=19%  Similarity=0.203  Sum_probs=142.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      |++++||||+|+||.+++++|+++|++|++++| ++.....+ ..+..   ...++.++.+|++|.+++.++++      
T Consensus         6 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (241)
T PRK07454          6 MPRALITGASSGIGKATALAFAKAGWDLALVAR-SQDALEALAAELRS---TGVKAAAYSIDLSNPEAIAPGIAELLEQF   81 (241)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---CCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999 43322222 11211   12468889999999998877654      


Q ss_pred             -CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 -GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 -~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                       ++|+|||+||.....     ..+.....+++|+.++.++++.+.    +.+ .+++|++||...+...           
T Consensus        82 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----------  149 (241)
T PRK07454         82 GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAF-----------  149 (241)
T ss_pred             CCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcCC-----------
Confidence             489999999864321     112223678899998888776653    333 5789999998766311           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                 .+..+|+.+|...+.+.+.++++   .+++++++||+.+-.|.....  . ..   .     .  .   
T Consensus       150 -----------~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~--~-~~---~-----~--~---  202 (241)
T PRK07454        150 -----------PQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE--T-VQ---A-----D--F---  202 (241)
T ss_pred             -----------CCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc--c-cc---c-----c--c---
Confidence                       22456999999999998887654   489999999999887742211  0 00   0     0  0   


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCC
Q 020334          225 LNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                      .....+.++|+|+++++++..+.
T Consensus       203 ~~~~~~~~~~va~~~~~l~~~~~  225 (241)
T PRK07454        203 DRSAMLSPEQVAQTILHLAQLPP  225 (241)
T ss_pred             ccccCCCHHHHHHHHHHHHcCCc
Confidence            00135789999999999998774

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.8e-20  Score=156.59  Aligned_cols=206  Identities=14%  Similarity=0.126  Sum_probs=145.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++|+||||+|+||++++++|+++|++|++++| +++....+ ..+...   ..++.++.+|+++.+++.++++      
T Consensus         9 ~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          9 GKVALVTGASSGLGARFAQVLAQAGAKVVLASR-RVERLKELRAEIEAE---GGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            589999999999999999999999999999999 43332222 112111   2467899999999988887765      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc----C-------CccEEEEeccceeeeecCCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS----G-------TVKRFVYTSSGSTVYFSGKD  139 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-------~~~~~v~~SS~~v~~~~~~~  139 (327)
                       ++|+|||+++....      ..+.+. ..++.|+.++..+++++...    .       ...++|++||...+..    
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----  159 (258)
T PRK06949         85 GTIDILVNNSGVSTTQKLVDVTPADFD-FVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV----  159 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHH-HHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC----
Confidence             58999999986432      112333 77899999998888876532    1       0258999999765521    


Q ss_pred             CCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhC
Q 020334          140 VDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLG  216 (327)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~  216 (327)
                                        .++..+|+.+|...+.+++.++.++   ++++++++||.+++|..........   ......
T Consensus       160 ------------------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~---~~~~~~  218 (258)
T PRK06949        160 ------------------LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQ---GQKLVS  218 (258)
T ss_pred             ------------------CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHH---HHHHHh
Confidence                              1224579999999999999887653   8999999999999986432111111   111111


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      . ...     ..+...+|+++++.+++...
T Consensus       219 ~-~~~-----~~~~~p~~~~~~~~~l~~~~  242 (258)
T PRK06949        219 M-LPR-----KRVGKPEDLDGLLLLLAADE  242 (258)
T ss_pred             c-CCC-----CCCcCHHHHHHHHHHHhChh
Confidence            1 111     25777899999999998753

>PRK08017 oxidoreductase; Provisional

Probab=99.85  E-value=8e-20  Score=155.08  Aligned_cols=205  Identities=21%  Similarity=0.165  Sum_probs=138.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +++|+||||+|+||.++++.|+++|++|++++| +++...   .+..     .+++.+.+|+.|.+++..+++       
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r-~~~~~~---~~~~-----~~~~~~~~D~~~~~~~~~~~~~i~~~~~   72 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACR-KPDDVA---RMNS-----LGFTGILLDLDDPESVERAADEVIALTD   72 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHhH---HHHh-----CCCeEEEeecCCHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999999999999 433222   2211     256888999999887665442       


Q ss_pred             -CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHH----HHHHHhcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 -GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGI----LKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 -~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l----~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                       .+|.+||++|.....     ..+...+.++.|+.++.++    ++.+++.+ .+++|++||...+.  +          
T Consensus        73 ~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~--~----------  139 (256)
T PRK08017         73 NRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLI--S----------  139 (256)
T ss_pred             CCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCccccc--C----------
Confidence             468999999853311     1112237789999888775    55666655 67999999964331  0          


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHH---HcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE---EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                .+..+.|+.+|...|.+.+.++.   ..+++++++||+.+..+.......        .........+..
T Consensus       140 ----------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~--------~~~~~~~~~~~~  201 (256)
T PRK08017        140 ----------TPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQ--------TQSDKPVENPGI  201 (256)
T ss_pred             ----------CCCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccc--------hhhccchhhhHH
Confidence                      12245699999999988776543   358999999998776542211000        000000000001


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCCCC
Q 020334          225 LNISMVHIDDVARAHIFLLEYPDAK  249 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~~~  249 (327)
                      ..+.+++++|+++++..+++++...
T Consensus       202 ~~~~~~~~~d~a~~~~~~~~~~~~~  226 (256)
T PRK08017        202 AARFTLGPEAVVPKLRHALESPKPK  226 (256)
T ss_pred             HhhcCCCHHHHHHHHHHHHhCCCCC
Confidence            1146799999999999999887643

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.85  E-value=1.1e-19  Score=153.08  Aligned_cols=213  Identities=19%  Similarity=0.180  Sum_probs=144.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      ++++|||||+|+||+++++.|+++|+.|++.+| ++.....+..  ..   ..++.++.+|+.|.+++.++++       
T Consensus         6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~-~~~~~~~~~~--~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T PRK12936          6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGT-RVEKLEALAA--EL---GERVKIFPANLSDRDEVKALGQKAEADLE   79 (245)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHH--Hh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            579999999999999999999999999988887 4322222111  11   2367889999999998877643       


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|+|||||+....      ..+++ .+.+++|+.++.++++++.+    .+ .++||++||...+...           
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----------  146 (245)
T PRK12936         80 GVDILVNNAGITKDGLFVRMSDEDW-DSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVTGN-----------  146 (245)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHH-HHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCcCC-----------
Confidence            58999999986432      12233 47789999999888887653    23 5789999997544211           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                 +....|+.+|...+.+++.++++   .++++++++|+.+..+.... .....   ...... ....   
T Consensus       147 -----------~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~-~~~~~---~~~~~~-~~~~---  207 (245)
T PRK12936        147 -----------PGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK-LNDKQ---KEAIMG-AIPM---  207 (245)
T ss_pred             -----------CCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc-cChHH---HHHHhc-CCCC---
Confidence                       11346999999888888777655   37999999999876653221 11111   111111 1111   


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 020334          225 LNISMVHIDDVARAHIFLLEYPDA---KGRYICSSA  257 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  257 (327)
                        ..+..++|+++++.+++.....   +..+++.++
T Consensus       208 --~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK12936        208 --KRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGG  241 (245)
T ss_pred             --CCCcCHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence              2467899999999988865332   335666543

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.85  E-value=6.3e-20  Score=156.07  Aligned_cols=210  Identities=16%  Similarity=0.101  Sum_probs=144.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|+++||||+|+||.+++++|+++|++|++++| +++.... ...+... ....++.++.+|++|++++.++++      
T Consensus         7 ~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          7 GKVALVTGAAQGIGAAIARAFAREGAAVALADL-DAALAERAAAAIARD-VAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc-cCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999 4332222 2222211 012467889999999988877664      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       .+|++||+||....      +.+++. ..+++|+.++..+++++.+    .+ ..++|++||...+..           
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----------  151 (260)
T PRK07063         85 GPLDVLVNNAGINVFADPLAMTDEDWR-RCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKI-----------  151 (260)
T ss_pred             CCCcEEEECCCcCCCCChhhCCHHHHH-HHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhccC-----------
Confidence             58999999986431      122333 7789999999888887653    33 469999999764421           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc--hHHHHHHHHhCCcccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAG--SVRSTLAMVLGNREEY  221 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~  221 (327)
                                 .+...+|+.+|...+.+++.++.++   |++++.++||.+-.+........  .......... ...+.
T Consensus       152 -----------~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~  219 (260)
T PRK07063        152 -----------IPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETL-ALQPM  219 (260)
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHH-hcCCC
Confidence                       1224469999999999999998765   79999999999877642211000  0000001011 11111


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      .     .+..++|+++++++++...
T Consensus       220 ~-----r~~~~~~va~~~~fl~s~~  239 (260)
T PRK07063        220 K-----RIGRPEEVAMTAVFLASDE  239 (260)
T ss_pred             C-----CCCCHHHHHHHHHHHcCcc
Confidence            1     4668999999999998764

>PRK07069 short chain dehydrogenase; Validated

Probab=99.85  E-value=5.3e-20  Score=155.68  Aligned_cols=210  Identities=17%  Similarity=0.133  Sum_probs=141.2

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhh-hhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------C
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLS-FLTNLPGASERLQIFNADLNDPESFDAAIA-------G   78 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   78 (327)
                      +|+||||+|+||.++++.|+++|++|++++|+..+....+. .+..... ...+..+.+|+.|++++.++++       +
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHG-EGVAFAAVQDVTDEAQWQALLAQAADAMGG   79 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCC-CceEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            48999999999999999999999999999994233222222 1111100 1234567899999998876654       5


Q ss_pred             CCEEEEccCCCCCC-----CCchHHHHHHHHHh----HHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           79 CAGVIHVAAPIDID-----GKETEEVMTQRAVN----GTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        79 ~d~vih~a~~~~~~-----~~~~~~~~~~~nv~----~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                      +|+|||+||.....     ..+.....+++|+.    ++..++..+++.+ .++||++||...+...             
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~~-------------  145 (251)
T PRK07069         80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKAE-------------  145 (251)
T ss_pred             ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccCC-------------
Confidence            79999999875421     11122366788887    6778888887765 6799999998766311             


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc-----CCcEEEEecCceecCCCCCCCCch-HHHHHHHHhCCcccccc
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH-----GLDLVTLIPSFVVGPFICPKFAGS-VRSTLAMVLGNREEYSI  223 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~i~R~~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~  223 (327)
                               +....|+.+|...+.+++.++.+.     +++++.++|+.+.+|......... ......... ...+.  
T Consensus       146 ---------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~--  213 (251)
T PRK07069        146 ---------PDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLA-RGVPL--  213 (251)
T ss_pred             ---------CCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHh-ccCCC--
Confidence                     223469999999999999887653     488999999999888643211100 000111111 11111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCC
Q 020334          224 LLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                         ..+.+++|+++++++++...
T Consensus       214 ---~~~~~~~~va~~~~~l~~~~  233 (251)
T PRK07069        214 ---GRLGEPDDVAHAVLYLASDE  233 (251)
T ss_pred             ---CCCcCHHHHHHHHHHHcCcc
Confidence               14678999999999987654

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.7e-19  Score=151.49  Aligned_cols=205  Identities=17%  Similarity=0.105  Sum_probs=144.9

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |..+++++|||||+|+||++++++|+++|++|++++| ++...     .     ...++.++.+|+.|++++.++++   
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r-~~~~~-----~-----~~~~~~~~~~D~~~~~~~~~~~~~~~   70 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGR-RAPET-----V-----DGRPAEFHAADVRDPDQVAALVDAIV   70 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-Chhhh-----h-----cCCceEEEEccCCCHHHHHHHHHHHH
Confidence            3444689999999999999999999999999999999 43220     0     02467899999999998877664   


Q ss_pred             ----CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCccc
Q 020334           78 ----GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                          ++|+||||||.....     ......+.+++|+.++..+++++.+.    ....++|++||...+..         
T Consensus        71 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~---------  141 (252)
T PRK07856         71 ERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP---------  141 (252)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC---------
Confidence                469999999864311     11222478899999999999987642    11468999999765421         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                   .+....|+.+|...+.+++.++.++  .++++.++|+.+..+........ . ....... ...+. 
T Consensus       142 -------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~-~-~~~~~~~-~~~~~-  204 (252)
T PRK07856        142 -------------SPGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGD-A-EGIAAVA-ATVPL-  204 (252)
T ss_pred             -------------CCCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccC-H-HHHHHHh-hcCCC-
Confidence                         1224569999999999999998765  38999999999987743221111 0 0111111 11111 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                          ..+..++|+++++++++...
T Consensus       205 ----~~~~~p~~va~~~~~L~~~~  224 (252)
T PRK07856        205 ----GRLATPADIAWACLFLASDL  224 (252)
T ss_pred             ----CCCcCHHHHHHHHHHHcCcc
Confidence                24678999999999998753

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1e-19  Score=151.90  Aligned_cols=214  Identities=18%  Similarity=0.119  Sum_probs=148.9

Q ss_pred             EEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---CCCEEEE
Q 020334            9 CVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA---GCAGVIH   84 (327)
Q Consensus         9 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vih   84 (327)
                      |||||+|+||.+++++|+++|++|++++| ++...... ..+.    ...+++++.+|++|++++.++++   ++|++||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r-~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~   75 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASR-SRDRLAAAARALG----GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVI   75 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHh----cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence            69999999999999999999999999999 43222221 1111    12468899999999999988886   4799999


Q ss_pred             ccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           85 VAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        85 ~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      +++.....     ..+...+.+++|+.++..++++....+ .+++|++||...+..                      .+
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~ss~~~~~~----------------------~~  132 (230)
T PRK07041         76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-GGSLTFVSGFAAVRP----------------------SA  132 (230)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcC-CeEEEEECchhhcCC----------------------CC
Confidence            99864321     112234789999999999999665544 679999999876631                      13


Q ss_pred             CchhhHhhhHHHHHHHHHHHHHc-CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHH
Q 020334          160 WGKSYVLTKTLTERAALEFAEEH-GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARA  238 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  238 (327)
                      +.+.|+.+|...+.+++.++.+. +++++.++|+.+-++................... ....     ..+..++|+|++
T Consensus       133 ~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~dva~~  206 (230)
T PRK07041        133 SGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAE-RLPA-----RRVGQPEDVANA  206 (230)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHh-cCCC-----CCCcCHHHHHHH
Confidence            35679999999999999988765 6899999999887654211101110111111111 1111     135678999999


Q ss_pred             HHHhhcCCCC-CceEEEec
Q 020334          239 HIFLLEYPDA-KGRYICSS  256 (327)
Q Consensus       239 ~~~~~~~~~~-~~~y~~~~  256 (327)
                      +..++..... +..|++.+
T Consensus       207 ~~~l~~~~~~~G~~~~v~g  225 (230)
T PRK07041        207 ILFLAANGFTTGSTVLVDG  225 (230)
T ss_pred             HHHHhcCCCcCCcEEEeCC
Confidence            9999987644 44677654

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.2e-19  Score=153.51  Aligned_cols=209  Identities=16%  Similarity=0.148  Sum_probs=141.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|+++||||+|+||.+++++|++.|++|++..++..+... ....+...   ...+..+.+|+.+.+++..+++      
T Consensus         4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (252)
T PRK12747          4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN---GGSAFSIGANLESLHGVEALYSSLDNEL   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc---CCceEEEecccCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999887542322221 11222211   2356788899999876654331      


Q ss_pred             -------CCCEEEEccCCCCCC---C--CchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCccc
Q 020334           78 -------GCAGVIHVAAPIDID---G--KETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 -------~~d~vih~a~~~~~~---~--~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                             ++|++||+||.....   .  .+.....+++|+.++..+++++.+.- ...+||++||...+..         
T Consensus        81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------  151 (252)
T PRK12747         81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS---------  151 (252)
T ss_pred             hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC---------
Confidence                   589999999864311   1  11123778899999999988776542 1359999999875521         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .+....|+.+|...+.+++.++.++   |++++.+.||.+.++..........   ...........
T Consensus       152 -------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~  215 (252)
T PRK12747        152 -------------LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPM---MKQYATTISAF  215 (252)
T ss_pred             -------------CCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHH---HHHHHHhcCcc
Confidence                         1223569999999999999887764   8999999999999885322111100   11111000011


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                           ..+..++|+++++.+++...
T Consensus       216 -----~~~~~~~dva~~~~~l~s~~  235 (252)
T PRK12747        216 -----NRLGEVEDIADTAAFLASPD  235 (252)
T ss_pred             -----cCCCCHHHHHHHHHHHcCcc
Confidence                 25789999999999998753

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.4e-19  Score=153.31  Aligned_cols=218  Identities=15%  Similarity=0.122  Sum_probs=148.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++|+||||+|+||.+++++|+++|++|++++| +++.... ...+...   ..++.++.+|++|.+++.++++      
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFAREGAKVVVADR-DAAGGEETVALIREA---GGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            589999999999999999999999999999999 4332222 2222221   2468899999999988877664      


Q ss_pred             -CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 -GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 -~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                       ++|+|||+||....       ..+++ .+.+++|+.++..+++++.    +.+ ..++|++||...+...         
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~~---------  151 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQGRLAEGSEAEF-DAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGAA---------  151 (253)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCC---------
Confidence             46999999986421       11233 3678899999877766543    333 5689999998766311         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                   .....|+.+|...+.+++.++.++   +++++.+.||.+-.+........ ........... .+. 
T Consensus       152 -------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~-~~~-  215 (253)
T PRK06172        152 -------------PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEA-DPRKAEFAAAM-HPV-  215 (253)
T ss_pred             -------------CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhccc-ChHHHHHHhcc-CCC-
Confidence                         224569999999999999988765   79999999999877643221110 01111111111 111 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD--AKGR-YICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~~  257 (327)
                          ..+..++|+++.+++++....  ..|. +.+.+.
T Consensus       216 ----~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg  249 (253)
T PRK06172        216 ----GRIGKVEEVASAVLYLCSDGASFTTGHALMVDGG  249 (253)
T ss_pred             ----CCccCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence                146789999999999987542  2343 345443

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.1e-19  Score=153.49  Aligned_cols=198  Identities=16%  Similarity=0.135  Sum_probs=141.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhh-hhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLS-FLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      |+++++||||+|+||.+++++|+++|++|++++| ++.....+. .+... ....++.++.+|++|++++.++++     
T Consensus         1 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (248)
T PRK08251          1 TRQKILITGASSGLGAGMAREFAAKGRDLALCAR-RTDRLEELKAELLAR-YPGIKVAVAALDVNDHDQVFEVFAEFRDE   78 (248)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHhh-CCCceEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 443322221 11111 112468889999999988876554     


Q ss_pred             --CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 --GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 --~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                        ++|+|||+||.....     ..+...+.+++|+.++..+++++.    +.+ .++||++||...+...          
T Consensus        79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~----------  147 (248)
T PRK08251         79 LGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGL----------  147 (248)
T ss_pred             cCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCC----------
Confidence              589999999864321     112223678999999988888764    334 6789999997654211          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 ..+...|+.+|...+.+++.+..++   +++++.++|+.+.++.....             +..     
T Consensus       148 -----------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-------------~~~-----  198 (248)
T PRK08251        148 -----------PGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA-------------KST-----  198 (248)
T ss_pred             -----------CCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc-------------ccC-----
Confidence                       0123569999999999988887653   79999999999987642210             000     


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCC
Q 020334          224 LLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                         ...+..+|.|+.++.+++++
T Consensus       199 ---~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        199 ---PFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             ---CccCCHHHHHHHHHHHHhcC
Confidence               13578999999999999864

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.85  E-value=6.8e-20  Score=155.58  Aligned_cols=225  Identities=15%  Similarity=0.151  Sum_probs=145.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhC-CCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTN-LPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++++|||||+|+||.+++++|+++|++|++++++..........+.. ......++.++.+|++|++++.+++.      
T Consensus         8 ~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (257)
T PRK12744          8 GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAF   87 (257)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhh
Confidence            57999999999999999999999999988877633322222211110 00012467889999999998887664      


Q ss_pred             -CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           78 -GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        78 -~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                       ++|++||+||...      .+.+++ ...+++|+.++..+++++.+.- ...++++++|+......             
T Consensus        88 ~~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~-------------  153 (257)
T PRK12744         88 GRPDIAINTVGKVLKKPIVEISEAEY-DEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT-------------  153 (257)
T ss_pred             CCCCEEEECCcccCCCCcccCCHHHH-HHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC-------------
Confidence             5799999998632      112233 3788999999999988887531 12466766433222101             


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                               +....|+.+|...|.+++.+++++   ++++++++||.+.++...+...........    ..........
T Consensus       154 ---------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~----~~~~~~~~~~  220 (257)
T PRK12744        154 ---------PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHK----TAAALSPFSK  220 (257)
T ss_pred             ---------CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhccc----cccccccccc
Confidence                     113469999999999999998775   699999999999877432211100000000    0000011112


Q ss_pred             CCeeeHHHHHHHHHHhhcCCC--CCceEEEec
Q 020334          227 ISMVHIDDVARAHIFLLEYPD--AKGRYICSS  256 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~~--~~~~y~~~~  256 (327)
                      +.+.+++|+++++.++++...  .+.++++.+
T Consensus       221 ~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~g  252 (257)
T PRK12744        221 TGLTDIEDIVPFIRFLVTDGWWITGQTILING  252 (257)
T ss_pred             CCCCCHHHHHHHHHHhhcccceeecceEeecC
Confidence            358899999999999998532  234566544

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.1e-19  Score=152.82  Aligned_cols=211  Identities=15%  Similarity=0.110  Sum_probs=144.1

Q ss_pred             CCCC-CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQ-KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~-~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |..+ +++++||||+|+||.+++++|+++|++|++++| +......+....     ..++.++.+|++|.+++.++++  
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~   74 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDI-DADNGAAVAASL-----GERARFIATDITDDAAIERAVATV   74 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHH
Confidence            5433 589999999999999999999999999999999 433222221111     2468899999999998877664  


Q ss_pred             -----CCCEEEEccCCCCC-----CCCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 -----GCAGVIHVAAPIDI-----DGKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                           .+|++||+||....     ..+.+ .+.+++|+.++..+++++...  ....++|++||.......         
T Consensus        75 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~---------  144 (261)
T PRK08265         75 VARFGRVDILVNLACTYLDDGLASSRADW-LAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ---------  144 (261)
T ss_pred             HHHhCCCCEEEECCCCCCCCcCcCCHHHH-HHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC---------
Confidence                 57999999986431     12233 377899999998888876542  124689999997654211         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                   +....|+.+|...+.+.+.++.++   |++++.++|+.+..+........... ..........+. 
T Consensus       145 -------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~-~~~~~~~~~~p~-  209 (261)
T PRK08265        145 -------------TGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRA-KADRVAAPFHLL-  209 (261)
T ss_pred             -------------CCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchh-HHHHhhcccCCC-
Confidence                         123469999999999999888664   79999999998877642211000000 000010001111 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                          ..+..++|+|+++.+++...
T Consensus       210 ----~r~~~p~dva~~~~~l~s~~  229 (261)
T PRK08265        210 ----GRVGDPEEVAQVVAFLCSDA  229 (261)
T ss_pred             ----CCccCHHHHHHHHHHHcCcc
Confidence                14668899999999999753

>PRK12742 oxidoreductase; Provisional

Probab=99.85  E-value=2.2e-19  Score=150.52  Aligned_cols=206  Identities=14%  Similarity=0.091  Sum_probs=141.8

Q ss_pred             CCCC-CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQ-KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~-~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |..+ +++||||||+|+||++++++|+++|++|+++.|+..+...   .+...    .++.++.+|++|.+.+.++++  
T Consensus         1 m~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~---~l~~~----~~~~~~~~D~~~~~~~~~~~~~~   73 (237)
T PRK12742          1 MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAE---RLAQE----TGATAVQTDSADRDAVIDVVRKS   73 (237)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHH---HHHHH----hCCeEEecCCCCHHHHHHHHHHh
Confidence            4433 5789999999999999999999999999887763332222   22111    135778899999988877664  


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc-CCccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS-GTVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                       ++|++||+||....      +.+++ +..+++|+.++..++..+.+. ....++|++||.....      .+       
T Consensus        74 ~~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~------~~-------  139 (237)
T PRK12742         74 GALDILVVNAGIAVFGDALELDADDI-DRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR------MP-------  139 (237)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHH-HHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc------CC-------
Confidence             48999999986431      11233 478999999998887666553 1146899999964310      00       


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                              .++...|+.+|...+.+++.++.++   ++++++++||.+..+..... .. ..   ..... ..+..    
T Consensus       140 --------~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~-~~-~~---~~~~~-~~~~~----  201 (237)
T PRK12742        140 --------VAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPAN-GP-MK---DMMHS-FMAIK----  201 (237)
T ss_pred             --------CCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccc-cH-HH---HHHHh-cCCCC----
Confidence                    1234579999999999999887654   79999999999987753221 11 11   11111 11111    


Q ss_pred             CCeeeHHHHHHHHHHhhcCC
Q 020334          227 ISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~  246 (327)
                       .+..++|+++++.+++...
T Consensus       202 -~~~~p~~~a~~~~~l~s~~  220 (237)
T PRK12742        202 -RHGRPEEVAGMVAWLAGPE  220 (237)
T ss_pred             -CCCCHHHHHHHHHHHcCcc
Confidence             4678999999999998764

>PRK08589 short chain dehydrogenase; Validated

Probab=99.85  E-value=1.8e-19  Score=154.13  Aligned_cols=215  Identities=14%  Similarity=0.112  Sum_probs=144.0

Q ss_pred             CCCC-CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQ-KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~-~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |..+ +|++|||||+|+||.+++++|+++|++|++++|+ .........+...   ..++.++.+|++|++++.++++  
T Consensus         1 m~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~   76 (272)
T PRK08589          1 MKRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN---GGKAKAYHVDISDEQQVKDFASEI   76 (272)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc---CCeEEEEEeecCCHHHHHHHHHHH
Confidence            4433 5789999999999999999999999999999994 3222222233221   2468889999999988876654  


Q ss_pred             -----CCCEEEEccCCCCC--C----CCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCCCCCccc
Q 020334           78 -----GCAGVIHVAAPIDI--D----GKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 -----~~d~vih~a~~~~~--~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                           ++|++||+||....  .    ..+.....+++|+.++..+++++.+.  .+..++|++||...+...        
T Consensus        77 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  148 (272)
T PRK08589         77 KEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAAD--------  148 (272)
T ss_pred             HHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCC--------
Confidence                 47999999986431  1    11122367889999887776665532  112689999997655211        


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHh---CCc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVL---GNR  218 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~---~~~  218 (327)
                                    +....|+.+|...+.+++.++.++   |++++.+.||.+..+.........-........   ...
T Consensus       149 --------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  214 (272)
T PRK08589        149 --------------LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWM  214 (272)
T ss_pred             --------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhcc
Confidence                          123469999999999999988764   799999999999877432111100000000000   001


Q ss_pred             cccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          219 EEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       219 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      .+.     ..+..++|+++++++++...
T Consensus       215 ~~~-----~~~~~~~~va~~~~~l~s~~  237 (272)
T PRK08589        215 TPL-----GRLGKPEEVAKLVVFLASDD  237 (272)
T ss_pred             CCC-----CCCcCHHHHHHHHHHHcCch
Confidence            111     14678999999999998753

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.85  E-value=3.3e-19  Score=152.78  Aligned_cols=212  Identities=17%  Similarity=0.130  Sum_probs=143.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      ||++|||||+|+||.+++++|+++|++|++++| +....   ..+..     .++.++.+|++|.+.+.++++       
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r-~~~~~---~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   71 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATAR-KAEDV---EALAA-----AGFTAVQLDVNDGAALARLAEELEAEHG   71 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeC-CHHHH---HHHHH-----CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999999999999 43222   22211     256788999999988876653       


Q ss_pred             CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           78 GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        78 ~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                      ++|+|||+||.....     ..+.....+++|+.++..+++++.+.  ....++|++||...+...              
T Consensus        72 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~--------------  137 (274)
T PRK05693         72 GLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT--------------  137 (274)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC--------------
Confidence            589999999864321     11222377899999998888877542  113689999996544210              


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC----------CchHHHH--HHHHh
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKF----------AGSVRST--LAMVL  215 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~----------~~~~~~~--~~~~~  215 (327)
                              +...+|+.+|...+.+++.++.+   .|+++++++||.+.++......          ..+....  .....
T Consensus       138 --------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (274)
T PRK05693        138 --------PFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARA  209 (274)
T ss_pred             --------CCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHH
Confidence                    22456999999999988887755   5899999999999876432110          0011000  00000


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcCCCCCceEEE
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYIC  254 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~  254 (327)
                      ..       ..-....++|+|+.++.+++++.....|..
T Consensus       210 ~~-------~~~~~~~~~~~a~~i~~~~~~~~~~~~~~~  241 (274)
T PRK05693        210 RA-------SQDNPTPAAEFARQLLAAVQQSPRPRLVRL  241 (274)
T ss_pred             Hh-------ccCCCCCHHHHHHHHHHHHhCCCCCceEEe
Confidence            00       001245789999999999887654444443

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.6e-19  Score=151.38  Aligned_cols=198  Identities=21%  Similarity=0.215  Sum_probs=141.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      ++++|+||||+|+||++++++|+++|++|++++| ++...... ..+...    .+++++.+|+.|.+++.++++     
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~l~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITAR-DQKELEEAAAELNNK----GNVLGLAADVRDEADVQRAVDAIVAA   79 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeC-CHHHHHHHHHHHhcc----CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 44332222 222211    468899999999988877664     


Q ss_pred             --CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 --GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 --~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                        ++|+|||+++.....     ..+...+.+++|+.++..+++++.+.  ...+++|++||...+..             
T Consensus        80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-------------  146 (237)
T PRK07326         80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF-------------  146 (237)
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC-------------
Confidence              689999999865421     11222367899999999988877643  12468999999764420             


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                               ......|+.+|...+.+.+.+..+   .|++++++||+.+.++..... +.           ..  ..   
T Consensus       147 ---------~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~-~~-----------~~--~~---  200 (237)
T PRK07326        147 ---------FAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT-PS-----------EK--DA---  200 (237)
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc-cc-----------hh--hh---
Confidence                     022346999999988888887644   489999999999877643211 00           00  00   


Q ss_pred             CCCeeeHHHHHHHHHHhhcCCC
Q 020334          226 NISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                        ..+..+|+++.++.++..+.
T Consensus       201 --~~~~~~d~a~~~~~~l~~~~  220 (237)
T PRK07326        201 --WKIQPEDIAQLVLDLLKMPP  220 (237)
T ss_pred             --ccCCHHHHHHHHHHHHhCCc
Confidence              13678999999999998764

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2e-19  Score=157.93  Aligned_cols=202  Identities=16%  Similarity=0.098  Sum_probs=140.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++|+||||+|+||.+++++|+++|++|++++| +....... ..+...   ..++.++.+|++|.++++++++      
T Consensus         8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R-~~~~l~~~~~~l~~~---g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          8 RQVVVITGASAGVGRATARAFARRGAKVVLLAR-GEEGLEALAAEIRAA---GGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHHc---CCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            468999999999999999999999999999999 43222221 222211   2467889999999998887654      


Q ss_pred             -CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHH----HHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 -GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIG----ILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 -~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~----l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                       ++|++||+|+.....     ..+.....+++|+.++..    ++..+++.+ ..+||++||...+...           
T Consensus        84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~~-----------  151 (334)
T PRK07109         84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRSI-----------  151 (334)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccCC-----------
Confidence             589999999864321     112223678888776655    445555544 5799999998766311           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc-----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH-----GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                 +....|+.+|...+.+.+.++.+.     ++++++++|+.+.+|....     ..   .......... 
T Consensus       152 -----------~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~-----~~---~~~~~~~~~~-  211 (334)
T PRK07109        152 -----------PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDW-----AR---SRLPVEPQPV-  211 (334)
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhh-----hh---hhccccccCC-
Confidence                       224579999999988888776543     6999999999988764211     00   0000111111 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                          ..+..++|+|++++++++++
T Consensus       212 ----~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        212 ----PPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             ----CCCCCHHHHHHHHHHHHhCC
Confidence                24678999999999999876

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.84  E-value=1.3e-19  Score=155.73  Aligned_cols=207  Identities=16%  Similarity=0.145  Sum_probs=142.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++++||||+|+||++++++|+++|++|++++| +...... ...+...   ..++.++.+|+.|.+++..+++      
T Consensus        10 ~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (278)
T PRK08277         10 GKVAVITGGGGVLGGAMAKELARAGAKVAILDR-NQEKAEAVVAEIKAA---GGEALAVKADVLDKESLEQARQQILEDF   85 (278)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999999 4322222 2222211   2367889999999988876654      


Q ss_pred             -CCCEEEEccCCCCCC---------------------CCchHHHHHHHHHhHHHHHHHH----HHhcCCccEEEEeccce
Q 020334           78 -GCAGVIHVAAPIDID---------------------GKETEEVMTQRAVNGTIGILKS----CLKSGTVKRFVYTSSGS  131 (327)
Q Consensus        78 -~~d~vih~a~~~~~~---------------------~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~  131 (327)
                       ++|++||+||.....                     .+++ ...+++|+.++..+++.    +++.+ ..++|++||..
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~  163 (278)
T PRK08277         86 GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGF-EFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSMN  163 (278)
T ss_pred             CCCCEEEECCCCCCcccccccccccccccccccccCCHHHH-HHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccch
Confidence             689999999853211                     1223 36788999988766554    44444 57899999987


Q ss_pred             eeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC---c
Q 020334          132 TVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFA---G  205 (327)
Q Consensus       132 v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~---~  205 (327)
                      .+..                      .++...|+.+|...+.+++.++.++   ++++..++|+.+.++.......   .
T Consensus       164 ~~~~----------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~  221 (278)
T PRK08277        164 AFTP----------------------LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDG  221 (278)
T ss_pred             hcCC----------------------CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccc
Confidence            6631                      1224469999999999999988775   7999999999999885321100   0


Q ss_pred             hHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcC
Q 020334          206 SVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                      ........... ..+.     ..+..++|+|+++++++..
T Consensus       222 ~~~~~~~~~~~-~~p~-----~r~~~~~dva~~~~~l~s~  255 (278)
T PRK08277        222 SLTERANKILA-HTPM-----GRFGKPEELLGTLLWLADE  255 (278)
T ss_pred             cchhHHHHHhc-cCCc-----cCCCCHHHHHHHHHHHcCc
Confidence            00011111111 1111     2467899999999999876

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.84  E-value=1.3e-19  Score=152.19  Aligned_cols=215  Identities=17%  Similarity=0.167  Sum_probs=146.8

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------CC
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-------GC   79 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   79 (327)
                      |||||++|+||++++++|+++|++|++++|+.+...... ..+...   ..++.++.+|++|.+++.+++.       .+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY---GVKALGVVCDVSDREDVKAVVEEIEEELGPI   77 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            589999999999999999999999999999442222111 122211   2357899999999998877664       46


Q ss_pred             CEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCcccCCCCCCh
Q 020334           80 AGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDE  151 (327)
Q Consensus        80 d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~  151 (327)
                      |+|||++|.....     ........++.|+.++..+++.+.+.   ...++|+++||...+...               
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~---------------  142 (239)
T TIGR01830        78 DILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGN---------------  142 (239)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC---------------
Confidence            9999999875321     11223477899999999999988753   125699999996544211               


Q ss_pred             hHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCC
Q 020334          152 DYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNIS  228 (327)
Q Consensus       152 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (327)
                             ++...|+.+|...+.+++.++++   .|++++++||+.+.++.... ....   ........ ....     .
T Consensus       143 -------~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~-~~~~---~~~~~~~~-~~~~-----~  205 (239)
T TIGR01830       143 -------AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDK-LSEK---VKKKILSQ-IPLG-----R  205 (239)
T ss_pred             -------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhh-cChH---HHHHHHhc-CCcC-----C
Confidence                   22346999999999988887765   48999999999887654221 1111   11111111 1111     4


Q ss_pred             eeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          229 MVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       229 ~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      +.+++|++++++.++....   .+.+|++.++
T Consensus       206 ~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       206 FGTPEEVANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             CcCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence            7789999999998885532   2346776543

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.3e-19  Score=154.17  Aligned_cols=202  Identities=19%  Similarity=0.139  Sum_probs=140.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      ||++|||||||+||.+++++|+++|++|++++| +++....+.....    ..++.++.+|+.|.+++.+++.       
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   75 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDI-NEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAATG   75 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999 4333222211110    2468899999999988876654       


Q ss_pred             -CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 -GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 -~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                       ++|+||||||.....     ..+.....+++|+.++..+++++.+    .+ ..++|++||...+...           
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----------  143 (260)
T PRK08267         76 GRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYGQ-----------  143 (260)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCC-----------
Confidence             469999999875421     1122347899999999999887753    23 5789999997544211           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                 .....|+.+|...+.+++.++.+   .++++++++|+.+..+...........   ......       
T Consensus       144 -----------~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~---~~~~~~-------  202 (260)
T PRK08267        144 -----------PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDA---GSTKRL-------  202 (260)
T ss_pred             -----------CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhh---hhHhhc-------
Confidence                       11346999999999999988765   379999999999876542210000000   000000       


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCC
Q 020334          225 LNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                        .-.+..+|++++++.+++.+
T Consensus       203 --~~~~~~~~va~~~~~~~~~~  222 (260)
T PRK08267        203 --GVRLTPEDVAEAVWAAVQHP  222 (260)
T ss_pred             --cCCCCHHHHHHHHHHHHhCC
Confidence              02356799999999999754

>PRK08324 short chain dehydrogenase; Validated

Probab=99.84  E-value=1.6e-19  Score=172.51  Aligned_cols=221  Identities=21%  Similarity=0.165  Sum_probs=150.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++++|||||+|+||.++++.|+++|++|++++| ++...... ..+..    ..++.++.+|++|.+++.++++      
T Consensus       422 gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r-~~~~~~~~~~~l~~----~~~v~~v~~Dvtd~~~v~~~~~~~~~~~  496 (681)
T PRK08324        422 GKVALVTGAAGGIGKATAKRLAAEGACVVLADL-DEEAAEAAAAELGG----PDRALGVACDVTDEAAVQAAFEEAALAF  496 (681)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeC-CHHHHHHHHHHHhc----cCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999999 43332222 11211    1368899999999998877664      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|+|||+||....      +.+.+. ..+++|+.++..+++++.    +.+...+||++||...+...          
T Consensus       497 g~iDvvI~~AG~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~----------  565 (681)
T PRK08324        497 GGVDIVVSNAGIAISGPIEETSDEDWR-RSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG----------  565 (681)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC----------
Confidence             68999999986432      122333 778999999999977664    33312689999997665311          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCcee-cCCCCCCCCchHHHHHHHHhCCcc---
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVV-GPFICPKFAGSVRSTLAMVLGNRE---  219 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~---  219 (327)
                                  +....|+.+|...+.+++.++.++   |+++++++|+.+| ++.....  .+.... ....+...   
T Consensus       566 ------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~--~~~~~~-~~~~g~~~~~~  630 (681)
T PRK08324        566 ------------PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTG--EWIEAR-AAAYGLSEEEL  630 (681)
T ss_pred             ------------CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccc--hhhhhh-hhhccCChHHH
Confidence                        224579999999999999988765   6999999999998 6542211  110000 00001100   


Q ss_pred             --cccccc-CCCeeeHHHHHHHHHHhhc--CCCC-CceEEEec
Q 020334          220 --EYSILL-NISMVHIDDVARAHIFLLE--YPDA-KGRYICSS  256 (327)
Q Consensus       220 --~~~~~~-~~~~i~v~D~a~~~~~~~~--~~~~-~~~y~~~~  256 (327)
                        .+.... .+.+++++|+|+++++++.  .... +.++++.+
T Consensus       631 ~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdg  673 (681)
T PRK08324        631 EEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDG  673 (681)
T ss_pred             HHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence              011111 1479999999999999984  2232 34677754

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2e-19  Score=151.02  Aligned_cols=193  Identities=18%  Similarity=0.173  Sum_probs=141.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC----CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG----CA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----~d   80 (327)
                      |++++||||+|+||.+++++|+++|++|++++| ++..   ...+...   ..++.++.+|++|.+++.+++++    +|
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r-~~~~---~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~d   73 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGR-NQSV---LDELHTQ---SANIFTLAFDVTDHPGTKAALSQLPFIPE   73 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEEC-CHHH---HHHHHHh---cCCCeEEEeeCCCHHHHHHHHHhcccCCC
Confidence            468999999999999999999999999999999 4322   2222211   24678899999999999888764    68


Q ss_pred             EEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhc-CCccEEEEeccceeeeecCCCCCcccCCCCCChhHh
Q 020334           81 GVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKS-GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYI  154 (327)
Q Consensus        81 ~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~  154 (327)
                      .+||+||.....     ..+...+.+++|+.++.++++++... ...+++|++||..... +                  
T Consensus        74 ~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~-~------------------  134 (240)
T PRK06101         74 LWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL-A------------------  134 (240)
T ss_pred             EEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc-C------------------
Confidence            999999754311     11112378999999999999998863 1135799999864321 0                  


Q ss_pred             hhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeee
Q 020334          155 RKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVH  231 (327)
Q Consensus       155 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  231 (327)
                         .+....|+.+|...+.+.+.++.+   .|++++++||+.+++|.....  .             ...+     ..+.
T Consensus       135 ---~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~--~-------------~~~~-----~~~~  191 (240)
T PRK06101        135 ---LPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN--T-------------FAMP-----MIIT  191 (240)
T ss_pred             ---CCCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC--C-------------CCCC-----cccC
Confidence               022346999999999999887743   489999999999998753221  0             0001     2468


Q ss_pred             HHHHHHHHHHhhcCC
Q 020334          232 IDDVARAHIFLLEYP  246 (327)
Q Consensus       232 v~D~a~~~~~~~~~~  246 (327)
                      .+|+++.++..++.+
T Consensus       192 ~~~~a~~i~~~i~~~  206 (240)
T PRK06101        192 VEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHHHHHHhcC
Confidence            999999999999875

>PRK09242 tropinone reductase; Provisional

Probab=99.84  E-value=3.8e-19  Score=150.99  Aligned_cols=209  Identities=17%  Similarity=0.146  Sum_probs=145.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|+++||||+|.||+++++.|+++|++|++++| +.+..... ..+... ....++.++.+|+++++++.++++     
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVAR-DADALAQARDELAEE-FPEREVHGLAADVSDDEDRRAILDWVEDH   85 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHhh-CCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999 43222221 222111 012467889999999987766553     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|+|||+||....      +.+++ ...+.+|+.++..+++++.+    .+ .+++|++||...+...         
T Consensus        86 ~g~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~---------  154 (257)
T PRK09242         86 WDGLHILVNNAGGNIRKAAIDYTEDEW-RGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTHV---------  154 (257)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHH-HHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCCC---------
Confidence              57999999986321      22233 37789999999999887753    33 5799999997655311         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                   .+...|+.+|...+.+++.++.++   +++++.++|+.+.+|........  .......... .+..
T Consensus       155 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~--~~~~~~~~~~-~~~~  218 (257)
T PRK09242        155 -------------RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSD--PDYYEQVIER-TPMR  218 (257)
T ss_pred             -------------CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCC--hHHHHHHHhc-CCCC
Confidence                         224569999999999999887654   89999999999988864322111  1111111111 1111


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                           -+...+|++.++.+++...
T Consensus       219 -----~~~~~~~va~~~~~l~~~~  237 (257)
T PRK09242        219 -----RVGEPEEVAAAVAFLCMPA  237 (257)
T ss_pred             -----CCcCHHHHHHHHHHHhCcc
Confidence                 3557899999999998653

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.1e-19  Score=153.10  Aligned_cols=196  Identities=17%  Similarity=0.083  Sum_probs=140.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA----GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~   79 (327)
                      ||+|+||||+|+||.++++.|+++|++|++++| +++... ....+...  ...++.++.+|++|++++.++++    .+
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   77 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAAR-DVERLERLADDLRAR--GAVAVSTHELDILDTASHAAFLDSLPALP   77 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeC-CHHHHHHHHHHHHHh--cCCeEEEEecCCCChHHHHHHHHHHhhcC
Confidence            468999999999999999999999999999999 433222 12222211  12478899999999998887665    46


Q ss_pred             CEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           80 AGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        80 d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                      |+|||++|.....      .++. .+.++.|+.++.++++++...   .+.+++|++||.....  +             
T Consensus        78 d~vv~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~-------------  141 (243)
T PRK07102         78 DIVLIAVGTLGDQAACEADPALA-LREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR--G-------------  141 (243)
T ss_pred             CEEEECCcCCCCcccccCCHHHH-HHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC--C-------------
Confidence            9999999864321      1122 267889999999998887642   1257999999965321  0             


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCC
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNI  227 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (327)
                             .+....|+.+|...+.+++.++.+   .|++++.++|+.++++.....             ..+       ..
T Consensus       142 -------~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~-------------~~~-------~~  194 (243)
T PRK07102        142 -------RASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL-------------KLP-------GP  194 (243)
T ss_pred             -------CCCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc-------------CCC-------cc
Confidence                   011346999999999999888654   489999999999998732110             000       01


Q ss_pred             CeeeHHHHHHHHHHhhcCC
Q 020334          228 SMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       228 ~~i~v~D~a~~~~~~~~~~  246 (327)
                      ....++|+++.++.+++++
T Consensus       195 ~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        195 LTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             ccCCHHHHHHHHHHHHhCC
Confidence            3567999999999999865

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.84  E-value=1.8e-19  Score=152.03  Aligned_cols=205  Identities=17%  Similarity=0.187  Sum_probs=139.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|.++||||+|+||++++++|++.|++|++..++..... .....+...   ..++..+.+|+.|.+++.++++      
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL---GFDFIASEGNVGDWDSTKAAFDKVKAEV   79 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999887654232221 112222211   2457788999999988877654      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|+||||||....      +.+++ .+.+++|+.++..+.+.+.    +.+ .+++|++||..... +          
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~-~----------  146 (246)
T PRK12938         80 GEIDVLVNNAGITRDVVFRKMTREDW-TAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQK-G----------  146 (246)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccC-C----------
Confidence             58999999986432      11233 3778999999777665544    344 57999999965431 0          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 ......|+.+|...+.+++.++++   .++++++++|+.+.+|......+.    ........ ...  
T Consensus       147 -----------~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~----~~~~~~~~-~~~--  208 (246)
T PRK12938        147 -----------QFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPD----VLEKIVAT-IPV--  208 (246)
T ss_pred             -----------CCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChH----HHHHHHhc-CCc--
Confidence                       122457999999999888887765   389999999999988753321111    11111111 111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCC
Q 020334          224 LLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                         ..+..++|+++++++++...
T Consensus       209 ---~~~~~~~~v~~~~~~l~~~~  228 (246)
T PRK12938        209 ---RRLGSPDEIGSIVAWLASEE  228 (246)
T ss_pred             ---cCCcCHHHHHHHHHHHcCcc
Confidence               14678999999999988754

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.4e-19  Score=151.14  Aligned_cols=208  Identities=18%  Similarity=0.097  Sum_probs=141.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++++|||||+|+||.+++++|+++|++|++++| +++..... ..+...   ..++.++.+|++|++++.++++      
T Consensus         9 ~k~ilItGasggIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   84 (264)
T PRK07576          9 GKNVVVVGGTSGINLGIAQAFARAGANVAVASR-SQEKVDAAVAQLQQA---GPEGLGVSADVRDYAAVEAAFAQIADEF   84 (264)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999999 43222211 122211   2356788999999988877654      


Q ss_pred             -CCCEEEEccCCCCC-----CCCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           78 -GCAGVIHVAAPIDI-----DGKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        78 -~~d~vih~a~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                       ++|++||+|+....     ...+.....+++|+.++.++++++.+.  .+.+++|++||...+. +             
T Consensus        85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~-~-------------  150 (264)
T PRK07576         85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV-P-------------  150 (264)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc-C-------------
Confidence             47999999974321     111222367889999999998887643  1135999999975442 0             


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCC-CCCCCchHHHHHHHHhCCcccccccc
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFI-CPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                              .+....|+.+|...+.+++.++.++   +++++.++|+.+.+... ....+...  ...... ...+.    
T Consensus       151 --------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~--~~~~~~-~~~~~----  215 (264)
T PRK07576        151 --------MPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPE--LQAAVA-QSVPL----  215 (264)
T ss_pred             --------CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHH--HHHHHH-hcCCC----
Confidence                    1224569999999999999887653   79999999998875321 11011100  001111 11111    


Q ss_pred             CCCeeeHHHHHHHHHHhhcCC
Q 020334          226 NISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~  246 (327)
                       ..+..++|+|+++++++...
T Consensus       216 -~~~~~~~dva~~~~~l~~~~  235 (264)
T PRK07576        216 -KRNGTKQDIANAALFLASDM  235 (264)
T ss_pred             -CCCCCHHHHHHHHHHHcChh
Confidence             24678999999999999753

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=8.3e-19  Score=148.83  Aligned_cols=218  Identities=19%  Similarity=0.094  Sum_probs=146.9

Q ss_pred             CCCCCCeEEEeCCcc--hhHHHHHHHHHHCCCeEEEEEcCCCC--------Ccch--h-hhhhCCCCCCCCeEEEeCCCC
Q 020334            1 MEEQKGKVCVTGGTG--FIGSWLIMRLLDHGYFVTTTVRSDPE--------HKKD--L-SFLTNLPGASERLQIFNADLN   67 (327)
Q Consensus         1 m~~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~--~-~~~~~~~~~~~~~~~~~~D~~   67 (327)
                      |..++++||||||||  .||.+++++|+++|++|++++|+..+        ....  + ..+..   ...++.++.+|++
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~   77 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES---YGVRCEHMEIDLS   77 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHh---cCCeEEEEECCCC
Confidence            566678999999996  69999999999999999999984110        1111  1 11111   1246889999999


Q ss_pred             ChhHHHHHhc-------CCCEEEEccCCCCCCC-----CchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEecccee
Q 020334           68 DPESFDAAIA-------GCAGVIHVAAPIDIDG-----KETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGST  132 (327)
Q Consensus        68 d~~~~~~~~~-------~~d~vih~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v  132 (327)
                      +.+++..+++       .+|+|||+||......     ....+..+++|+.++..+++++.+.   ...+++|++||...
T Consensus        78 ~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~  157 (256)
T PRK12748         78 QPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQS  157 (256)
T ss_pred             CHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccc
Confidence            9988766554       4799999998643211     1122367899999999999887643   11469999999766


Q ss_pred             eeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHH
Q 020334          133 VYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRS  209 (327)
Q Consensus       133 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~  209 (327)
                      +...                      +....|+.+|...+.+++.++.++   +++++.++|+.+..+....    ..  
T Consensus       158 ~~~~----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~----~~--  209 (256)
T PRK12748        158 LGPM----------------------PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE----EL--  209 (256)
T ss_pred             cCCC----------------------CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh----hH--
Confidence            5311                      223469999999999998887653   8999999999877664221    11  


Q ss_pred             HHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--C-CceEEEec
Q 020334          210 TLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--A-KGRYICSS  256 (327)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~  256 (327)
                       ....... ...     ..+.-++|+++++.+++....  . +.++++.+
T Consensus       210 -~~~~~~~-~~~-----~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~  252 (256)
T PRK12748        210 -KHHLVPK-FPQ-----GRVGEPVDAARLIAFLVSEEAKWITGQVIHSEG  252 (256)
T ss_pred             -HHhhhcc-CCC-----CCCcCHHHHHHHHHHHhCcccccccCCEEEecC
Confidence             1111111 010     134567999999998887532  2 33555543

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4e-19  Score=150.65  Aligned_cols=204  Identities=19%  Similarity=0.162  Sum_probs=137.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +++|+||||+|+||.+++++|+++|++|++++| +.........  ..     ...++.+|++|++++.++++       
T Consensus         7 ~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r-~~~~~~~~~~--~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06057          7 GRVAVITGGGSGIGLATARRLAAEGATVVVGDI-DPEAGKAAAD--EV-----GGLFVPTDVTDEDAVNALFDTAAETYG   78 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH--Hc-----CCcEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999999999999999 4322221111  11     22578899999998887765       


Q ss_pred             CCCEEEEccCCCCCC-------CCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccce-eeeecCCCCCcccC
Q 020334           78 GCAGVIHVAAPIDID-------GKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGS-TVYFSGKDVDMLDE  145 (327)
Q Consensus        78 ~~d~vih~a~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~-v~~~~~~~~~~~~E  145 (327)
                      ++|+|||+||.....       ..+...+.+++|+.++..+++.+.    +.+ ..++|++||.. +++ .         
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g-~---------  147 (255)
T PRK06057         79 SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMG-S---------  147 (255)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccC-C---------
Confidence            579999999864311       111234778899999877776654    333 46899999854 332 1         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  ..+...|+.+|...+.+++.++.+   .++++++++||.+.+|..............+...  .... 
T Consensus       148 ------------~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~-  212 (255)
T PRK06057        148 ------------ATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLV--HVPM-  212 (255)
T ss_pred             ------------CCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHh--cCCC-
Confidence                        012346999998777777765543   3899999999999988643221111111111111  1111 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                          ..+..++|+++++..++...
T Consensus       213 ----~~~~~~~~~a~~~~~l~~~~  232 (255)
T PRK06057        213 ----GRFAEPEEIAAAVAFLASDD  232 (255)
T ss_pred             ----CCCcCHHHHHHHHHHHhCcc
Confidence                26889999999999888653

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3e-19  Score=154.14  Aligned_cols=197  Identities=16%  Similarity=0.156  Sum_probs=140.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++|+||||+|+||.+++++|+++|++|++++| +.+....+ ..+...   ...+.++.+|+.|.+++.++++      
T Consensus        40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R-~~~~l~~~~~~l~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  115 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFARRGATVVAVAR-REDLLDAVADRITRA---GGDAMAVPCDLSDLDAVDALVADVEKRI  115 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999 43222222 222111   2357889999999998887765      


Q ss_pred             -CCCEEEEccCCCCCCC-----C--chHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 -GCAGVIHVAAPIDIDG-----K--ETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 -~~d~vih~a~~~~~~~-----~--~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                       ++|+||||||......     .  ......+++|+.++..+++++.    +.+ ..++|++||.+++...         
T Consensus       116 g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~---------  185 (293)
T PRK05866        116 GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSEA---------  185 (293)
T ss_pred             CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCC---------
Confidence             6899999998653211     0  1223678899999888777654    444 5799999997654200         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .+..+.|+.+|...+.+++.++.++   ++++++++||.+-.+.....         .  ...     
T Consensus       186 ------------~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~---------~--~~~-----  237 (293)
T PRK05866        186 ------------SPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT---------K--AYD-----  237 (293)
T ss_pred             ------------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccc---------c--ccc-----
Confidence                        0123469999999999988887654   89999999998766642110         0  000     


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                         ....+..+++|+.++.+++++
T Consensus       238 ---~~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        238 ---GLPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             ---CCCCCCHHHHHHHHHHHHhcC
Confidence               012467899999999999875

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.84  E-value=3.7e-20  Score=154.80  Aligned_cols=218  Identities=26%  Similarity=0.313  Sum_probs=148.7

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEccC
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHVAA   87 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~a~   87 (327)
                      |+|+||||.+|+++++.|++.+++|.++.| ++ .......+..     .+++.+.+|+.|++++.++++++|+|+.+.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R-~~-~~~~~~~l~~-----~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVR-DP-SSDRAQQLQA-----LGAEVVEADYDDPESLVAALKGVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEES-SS-HHHHHHHHHH-----TTTEEEES-TT-HHHHHHHHTTCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEe-cc-chhhhhhhhc-----ccceEeecccCCHHHHHHHHcCCceEEeecC
Confidence            799999999999999999999999999999 43 2222222322     3678899999999999999999999998887


Q ss_pred             CCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhh
Q 020334           88 PIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLT  167 (327)
Q Consensus        88 ~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~s  167 (327)
                      ...    ...       +....++++++++.+ +++||+.|....+    .      +...         ..|..+....
T Consensus        74 ~~~----~~~-------~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~----~------~~~~---------~~p~~~~~~~  122 (233)
T PF05368_consen   74 PSH----PSE-------LEQQKNLIDAAKAAG-VKHFVPSSFGADY----D------ESSG---------SEPEIPHFDQ  122 (233)
T ss_dssp             CSC----CCH-------HHHHHHHHHHHHHHT--SEEEESEESSGT----T------TTTT---------STTHHHHHHH
T ss_pred             cch----hhh-------hhhhhhHHHhhhccc-cceEEEEEecccc----c------cccc---------ccccchhhhh
Confidence            543    111       334689999999999 9999965532221    0      1100         1223445567


Q ss_pred             hHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCC--ccccccccC--CCe-eeHHHHHHHHHHh
Q 020334          168 KTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGN--REEYSILLN--ISM-VHIDDVARAHIFL  242 (327)
Q Consensus       168 K~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~-i~v~D~a~~~~~~  242 (327)
                      |...|+.+++    .+++++++||+..+......    ...  .......  ...+...+.  ..+ +..+|++++++.+
T Consensus       123 k~~ie~~l~~----~~i~~t~i~~g~f~e~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~i  192 (233)
T PF05368_consen  123 KAEIEEYLRE----SGIPYTIIRPGFFMENLLPP----FAP--VVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAI  192 (233)
T ss_dssp             HHHHHHHHHH----CTSEBEEEEE-EEHHHHHTT----THH--TTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHH
T ss_pred             hhhhhhhhhh----ccccceeccccchhhhhhhh----hcc--cccccccceEEEEccCCCccccccccHHHHHHHHHHH
Confidence            8877777754    58999999999777643211    000  0001111  122333322  456 4999999999999


Q ss_pred             hcCCCCC--c-eEEEeccccCHHHHHHHHHHhCC
Q 020334          243 LEYPDAK--G-RYICSSAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       243 ~~~~~~~--~-~y~~~~~~~s~~e~~~~i~~~~~  273 (327)
                      +..+...  + .+.+.++.+|+.|+++.+.+.+|
T Consensus       193 l~~p~~~~~~~~~~~~~~~~t~~eia~~~s~~~G  226 (233)
T PF05368_consen  193 LLDPEKHNNGKTIFLAGETLTYNEIAAILSKVLG  226 (233)
T ss_dssp             HHSGGGTTEEEEEEEGGGEEEHHHHHHHHHHHHT
T ss_pred             HcChHHhcCCEEEEeCCCCCCHHHHHHHHHHHHC
Confidence            9887654  3 45677889999999999999887

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.3e-19  Score=150.98  Aligned_cols=207  Identities=14%  Similarity=0.182  Sum_probs=143.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .++++|||||+|+||.+++++|+++|++|++++| +.+....+ ..+...   ..++.++.+|++|++++.++++     
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAAR-HLDALEKLADEIGTS---GGKVVPVCCDVSQHQQVTSMLDQVTAE   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHhc---CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 43332222 222211   2467889999999998877654     


Q ss_pred             --CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++|||||.....      .+.+ .+.+++|+.++..+++++...    +...++|++||.......      .  
T Consensus        84 ~g~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------~--  154 (253)
T PRK05867         84 LGGIDIAVCNAGIITVTPMLDMPLEEF-QRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN------V--  154 (253)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC------C--
Confidence              689999999865421      1223 367889999998888876532    212579999986432100      0  


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  ......|+.+|...+.+++.++.++   |+++..++||.+-.+.... ...    ....... ..+..
T Consensus       155 ------------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~-~~~----~~~~~~~-~~~~~  216 (253)
T PRK05867        155 ------------PQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP-YTE----YQPLWEP-KIPLG  216 (253)
T ss_pred             ------------CCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc-chH----HHHHHHh-cCCCC
Confidence                        0112469999999999999988764   8999999999997764321 111    1111111 11111


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                           .+..++|+|+++++++...
T Consensus       217 -----r~~~p~~va~~~~~L~s~~  235 (253)
T PRK05867        217 -----RLGRPEELAGLYLYLASEA  235 (253)
T ss_pred             -----CCcCHHHHHHHHHHHcCcc
Confidence                 4778999999999999753

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.6e-19  Score=150.79  Aligned_cols=221  Identities=18%  Similarity=0.140  Sum_probs=149.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCe-EEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYF-VTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .++|+||||+|+||++++++|+++|++ |++++| ++.... ....+...   ..++.++.+|++|++++.++++     
T Consensus         6 ~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          6 GKVALVTGGTQGLGAAIARAFAERGAAGLVICGR-NAEKGEAQAAELEAL---GAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcC-CHHHHHHHHHHHHhc---CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999 999999 432222 11222111   2467889999999998877664     


Q ss_pred             --CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 --GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 --~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                        ++|+|||+++.....     ..+.....+++|+.++.++++++.+.    +...++|++||...++..          
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----------  151 (260)
T PRK06198         82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ----------  151 (260)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC----------
Confidence              579999999864311     11222367899999999988877542    113589999998766411          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCC---CCCchHHHHHHHHhCCccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICP---KFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~  220 (327)
                                  +....|+.+|...|.+++.++.++   +++++.++|+.++++....   .+......+...... ...
T Consensus       152 ------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-~~~  218 (260)
T PRK06198        152 ------------PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAA-TQP  218 (260)
T ss_pred             ------------CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhc-cCC
Confidence                        123469999999999999887654   6999999999999985321   000011111111111 111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      +     ..+++++|+++++++++....   .+..+...++
T Consensus       219 ~-----~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~  253 (260)
T PRK06198        219 F-----GRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQS  253 (260)
T ss_pred             c-----cCCcCHHHHHHHHHHHcChhhCCccCceEeECCc
Confidence            1     257899999999999986543   2334555443

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.83  E-value=3e-19  Score=150.98  Aligned_cols=207  Identities=16%  Similarity=0.156  Sum_probs=143.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+|++|||||+|.||.+++++|+++|++|++++|+..  ......+...   ..++.++.+|++|.+++.++++      
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL---GRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc---CCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999888321  1111222211   2467889999999998887764      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++||+||....      ..+++. ..+++|+.++..+.+++.+    .+...++|++||...+...          
T Consensus        82 g~iD~lv~~ag~~~~~~~~~~~~~~~~-~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------  150 (251)
T PRK12481         82 GHIDILINNAGIIRRQDLLEFGNKDWD-DVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG----------  150 (251)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHH-HHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC----------
Confidence             57999999986432      123343 7789999998877776543    2213689999998765311          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                  .....|+.+|...+.+.+.++.+   +|+++..++||.+-.+..... ... ......... ..+.. 
T Consensus       151 ------------~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~-~~~-~~~~~~~~~-~~p~~-  214 (251)
T PRK12481        151 ------------IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAAL-RAD-TARNEAILE-RIPAS-  214 (251)
T ss_pred             ------------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhc-ccC-hHHHHHHHh-cCCCC-
Confidence                        11236999999999999988775   489999999999877642211 100 000111111 11111 


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCC
Q 020334          224 LLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                          .+..++|+++++.+++...
T Consensus       215 ----~~~~peeva~~~~~L~s~~  233 (251)
T PRK12481        215 ----RWGTPDDLAGPAIFLSSSA  233 (251)
T ss_pred             ----CCcCHHHHHHHHHHHhCcc
Confidence                4778999999999999753

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.7e-19  Score=157.05  Aligned_cols=182  Identities=19%  Similarity=0.118  Sum_probs=124.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++|+||||+|+||.+++++|+++|++|++++| +.... .....+... ....++.++.+|++|.+++.++++      
T Consensus        16 ~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         16 GRVAVVTGANTGLGYETAAALAAKGAHVVLAVR-NLDKGKAAAARITAA-TPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHh-CCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            578999999999999999999999999999999 43222 112222211 012467889999999998877654      


Q ss_pred             -CCCEEEEccCCCCC----CCCchHHHHHHHHHhH----HHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 -GCAGVIHVAAPIDI----DGKETEEVMTQRAVNG----TIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 -~~d~vih~a~~~~~----~~~~~~~~~~~~nv~~----~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                       ++|+|||+||....    ..+... ..+++|+.+    +..+++.+++.+ .++||++||...+..+.   ...++..+
T Consensus        94 ~~iD~li~nAg~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~---~~~~~~~~  168 (306)
T PRK06197         94 PRIDLLINNAGVMYTPKQTTADGFE-LQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAA---IHFDDLQW  168 (306)
T ss_pred             CCCCEEEECCccccCCCccCCCCcc-hhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCC---CCccccCc
Confidence             58999999986432    122333 778999998    556666666654 57999999986542121   11111111


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEE--EecCceecCCC
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVT--LIPSFVVGPFI  199 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i--~R~~~v~G~~~  199 (327)
                      .      ....+...|+.||...+.+.+.+++++   ++++++  +.||.+..+..
T Consensus       169 ~------~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~  218 (306)
T PRK06197        169 E------RRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELA  218 (306)
T ss_pred             c------cCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccc
Confidence            0      001345689999999999999888764   666554  47998877643

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.83  E-value=5.6e-19  Score=150.65  Aligned_cols=209  Identities=14%  Similarity=0.114  Sum_probs=143.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++++||||+|+||.+++++|+++|++|++++| ++..... ...+...   ..++.++.+|++|.+++.+++.      
T Consensus        10 ~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (265)
T PRK07097         10 GKIALITGASYGIGFAIAKAYAKAGATIVFNDI-NQELVDKGLAAYREL---GIEAHGYVCDVTDEDGVQAMVSQIEKEV   85 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999988 4332222 2222211   2368889999999998887764      


Q ss_pred             -CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 -GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 -~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                       .+|++||+||.....     ..+.....+++|+.++..+.+.+..    .+ .++||++||..... +           
T Consensus        86 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-~-----------  152 (265)
T PRK07097         86 GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSEL-G-----------  152 (265)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccC-C-----------
Confidence             479999999975421     1122337788999988877776553    33 57999999964331 1           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC---c-hHHHHHHHHhCCccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFA---G-SVRSTLAMVLGNREE  220 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~---~-~~~~~~~~~~~~~~~  220 (327)
                                ..+...|+.+|...+.+++.+++++   |++++.++||.+.++.......   . ....+...... ..+
T Consensus       153 ----------~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~  221 (265)
T PRK07097        153 ----------RETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIA-KTP  221 (265)
T ss_pred             ----------CCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHh-cCC
Confidence                      1224569999999999999998775   8999999999999885322100   0 00000000110 101


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      .     ..+..++|++++++.++...
T Consensus       222 ~-----~~~~~~~dva~~~~~l~~~~  242 (265)
T PRK07097        222 A-----ARWGDPEDLAGPAVFLASDA  242 (265)
T ss_pred             c-----cCCcCHHHHHHHHHHHhCcc
Confidence            1     14678899999999998763

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.83  E-value=6.6e-19  Score=150.07  Aligned_cols=211  Identities=21%  Similarity=0.188  Sum_probs=143.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +++++||||+|+||++++++|+++|++|++++| +.........+...   ..++.++.+|+.+.+++.++++       
T Consensus         6 ~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          6 GKTALITGALQGIGEGIARVFARHGANLILLDI-SPEIEKLADELCGR---GHRCTAVVADVRDPASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecC-CHHHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            588999999999999999999999999999999 33222222222211   2467889999999998877664       


Q ss_pred             CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           78 GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        78 ~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                      .+|+|||+||.....     ..+...+.++.|+.++..+++++.+.   ...+++|++||.......             
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------  148 (263)
T PRK08226         82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVA-------------  148 (263)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccC-------------
Confidence            579999999864321     11222367899999999888876542   125689999986431100             


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC----CCchHHHHHHHHhCCccccc
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPK----FAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~  222 (327)
                              .+....|+.+|...+.+++.++.++   +++++.++||.+.+|.....    .+............ ..+..
T Consensus       149 --------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~  219 (263)
T PRK08226        149 --------DPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAK-AIPLR  219 (263)
T ss_pred             --------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhc-cCCCC
Confidence                    0123469999999999999988764   79999999999988742210    01111111121111 11111


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                           .+..++|+++++.+++...
T Consensus       220 -----~~~~~~~va~~~~~l~~~~  238 (263)
T PRK08226        220 -----RLADPLEVGELAAFLASDE  238 (263)
T ss_pred             -----CCCCHHHHHHHHHHHcCch
Confidence                 4678999999999988643

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.83  E-value=8.6e-19  Score=148.26  Aligned_cols=197  Identities=15%  Similarity=0.122  Sum_probs=137.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .++|+||||+|+||.+++++|+++| ++|++++|+....... ...+....  ..+++++.+|++|.+++.++++     
T Consensus         8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~   85 (253)
T PRK07904          8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG--ASSVEVIDFDALDTDSHPKVIDAAFAG   85 (253)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC--CCceEEEEecCCChHHHHHHHHHHHhc
Confidence            5789999999999999999999985 9999999943321222 22232210  1368999999999887655443     


Q ss_pred             -CCCEEEEccCCCCCCCC---ch--HHHHHHHHHhHHHH----HHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 -GCAGVIHVAAPIDIDGK---ET--EEVMTQRAVNGTIG----ILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 -~~d~vih~a~~~~~~~~---~~--~~~~~~~nv~~~~~----l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                       ++|++||++|.......   +.  ..+.+++|+.++..    +++.+++.+ ..+||++||...+.  +          
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~--~----------  152 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGER--V----------  152 (253)
T ss_pred             CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcC--C----------
Confidence             68999999987542111   11  12468999988766    566666665 67999999975431  0          


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                .++...|+.||.....+.+.+..+   .++++++++||.+..+.....              ...     
T Consensus       153 ----------~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~--------------~~~-----  203 (253)
T PRK07904        153 ----------RRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA--------------KEA-----  203 (253)
T ss_pred             ----------CCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC--------------CCC-----
Confidence                      022346999999988776666433   589999999999988632110              000     


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCC
Q 020334          225 LNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                        ...+..+|+|+.++.+++++.
T Consensus       204 --~~~~~~~~~A~~i~~~~~~~~  224 (253)
T PRK07904        204 --PLTVDKEDVAKLAVTAVAKGK  224 (253)
T ss_pred             --CCCCCHHHHHHHHHHHHHcCC
Confidence              024688999999999998763

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.83  E-value=5.7e-19  Score=150.43  Aligned_cols=210  Identities=20%  Similarity=0.160  Sum_probs=145.7

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |...++++|||||+|+||.+++++|+++|++|++++| ++.....+ ..+ .   ...++.++.+|++|++.+.++++  
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~-~---~~~~~~~~~~D~~d~~~~~~~~~~~   75 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGR-NAEKLEALAARL-P---YPGRHRWVVADLTSEAGREAVLARA   75 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHH-h---cCCceEEEEccCCCHHHHHHHHHHH
Confidence            5555789999999999999999999999999999999 43322222 112 1   13478899999999988776654  


Q ss_pred             ----CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 ----GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                          .+|+|||+||.....     ..+...+.+++|+.++.++++.+.+.   .+..++|++||...+...         
T Consensus        76 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------  146 (263)
T PRK09072         76 REMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY---------  146 (263)
T ss_pred             HhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC---------
Confidence                579999999865421     11222467889999999998887642   114689999886543210         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                   +....|+.+|...+.+++.++.++   +++++.+.|+.+.++........        .. ..  . 
T Consensus       147 -------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~--------~~-~~--~-  201 (263)
T PRK09072        147 -------------PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA--------LN-RA--L-  201 (263)
T ss_pred             -------------CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc--------cc-cc--c-
Confidence                         123469999999988888887653   79999999998866532110000        00 00  0 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCCCCceEE
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPDAKGRYI  253 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~  253 (327)
                         ......++|+|++++.+++++. .++|.
T Consensus       202 ---~~~~~~~~~va~~i~~~~~~~~-~~~~~  228 (263)
T PRK09072        202 ---GNAMDDPEDVAAAVLQAIEKER-AERWL  228 (263)
T ss_pred             ---cCCCCCHHHHHHHHHHHHhCCC-CEEec
Confidence               0146788999999999998863 34443

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.83  E-value=1.8e-18  Score=145.01  Aligned_cols=211  Identities=16%  Similarity=0.097  Sum_probs=141.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      |+|++|||||+|+||.+++++|+++|++|++++| ++...  ...+..     .++.++.+|+.|++++.++++      
T Consensus         1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~--~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~   72 (236)
T PRK06483          1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYR-THYPA--IDGLRQ-----AGAQCIQADFSTNAGIMAFIDELKQHT   72 (236)
T ss_pred             CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeC-CchhH--HHHHHH-----cCCEEEEcCCCCHHHHHHHHHHHHhhC
Confidence            4689999999999999999999999999999999 43221  122211     246789999999988776553      


Q ss_pred             -CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhc---CC--ccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKS---GT--VKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~--~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++||+||.....     ..+.....+++|+.++..+.+.+.+.   ..  ..++|++||..... +          
T Consensus        73 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~-~----------  141 (236)
T PRK06483         73 DGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK-G----------  141 (236)
T ss_pred             CCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc-C----------
Confidence             489999999864311     11223478899999988776665542   11  35899999865321 0          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                 .+....|+.+|...+.+++.++.++  ++++..++|+.+..+...   ....   ....... .+..  
T Consensus       142 -----------~~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~---~~~~---~~~~~~~-~~~~--  201 (236)
T PRK06483        142 -----------SDKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD---DAAY---RQKALAK-SLLK--  201 (236)
T ss_pred             -----------CCCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC---CHHH---HHHHhcc-Cccc--
Confidence                       0123469999999999999998875  599999999988543211   1111   1111111 1111  


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCCCCc-eEEEec
Q 020334          225 LNISMVHIDDVARAHIFLLEYPDAKG-RYICSS  256 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~  256 (327)
                         -+..++|+++++.+++......| .+.+.+
T Consensus       202 ---~~~~~~~va~~~~~l~~~~~~~G~~i~vdg  231 (236)
T PRK06483        202 ---IEPGEEEIIDLVDYLLTSCYVTGRSLPVDG  231 (236)
T ss_pred             ---cCCCHHHHHHHHHHHhcCCCcCCcEEEeCc
Confidence               35578999999999997544444 334433

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.83  E-value=1.4e-18  Score=147.06  Aligned_cols=207  Identities=17%  Similarity=0.157  Sum_probs=144.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+++++||||+|.||.+++++|++.|++|++++|...  ......+...   ..++..+.+|++|.+++.++++      
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL---GRRFLSLTADLRKIDGIPALLERAVAEF   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3588999999999999999999999999998877321  2222233221   2467889999999988877664      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++|||||....      ..+++. +.+++|+.++..+++++...    +...++|++||...+...          
T Consensus        84 ~~~D~li~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  152 (253)
T PRK08993         84 GHIDILVNNAGLIRREDAIEFSEKDWD-DVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG----------  152 (253)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHH-HHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC----------
Confidence             58999999986432      123444 88999999999888876542    213589999998765311          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                  .....|+.+|...+.+++.++.+   .|++++.++||.+-.+.........  ........ ..+.  
T Consensus       153 ------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~--~~~~~~~~-~~p~--  215 (253)
T PRK08993        153 ------------IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADE--QRSAEILD-RIPA--  215 (253)
T ss_pred             ------------CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccch--HHHHHHHh-cCCC--
Confidence                        11236999999999999988876   4899999999999877432110110  00111111 1111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCC
Q 020334          224 LLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                         ..+.-++|+++++++++...
T Consensus       216 ---~r~~~p~eva~~~~~l~s~~  235 (253)
T PRK08993        216 ---GRWGLPSDLMGPVVFLASSA  235 (253)
T ss_pred             ---CCCcCHHHHHHHHHHHhCcc
Confidence               14778899999999999764

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.83  E-value=1.1e-18  Score=144.04  Aligned_cols=204  Identities=20%  Similarity=0.239  Sum_probs=144.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhh-hhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLS-FLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      ++++++|||||+.||..++++|+++|++|+.+.| +.++...+. ++....  .-.+.++.+|+++++++.++.+     
T Consensus         5 ~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR-~~~kL~~la~~l~~~~--~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           5 KGKTALITGASSGIGAELAKQLARRGYNLILVAR-REDKLEALAKELEDKT--GVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-cHHHHHHHHHHHHHhh--CceEEEEECcCCChhHHHHHHHHHHhc
Confidence            4679999999999999999999999999999999 433332222 222110  2357889999999998887664     


Q ss_pred             --CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 --GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 --~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                        .+|++|||||...+.     ..+...+++++|+.+...|..++    .+.+ ..++|.++|.+.+-.           
T Consensus        82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p-----------  149 (265)
T COG0300          82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIP-----------  149 (265)
T ss_pred             CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCC-----------
Confidence              589999999864422     22333488999998876665554    4444 679999999887631           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .+..+.|+.||...-.+-..+..+.   |++++.+-||.+..+..... ...             ....
T Consensus       150 -----------~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~-~~~-------------~~~~  204 (265)
T COG0300         150 -----------TPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAK-GSD-------------VYLL  204 (265)
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccccc-ccc-------------cccc
Confidence                       1235679999998777776666554   89999999999888753210 000             0000


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                      .-.+-+...+|+|+..+..+++.+
T Consensus       205 ~~~~~~~~~~~va~~~~~~l~~~k  228 (265)
T COG0300         205 SPGELVLSPEDVAEAALKALEKGK  228 (265)
T ss_pred             cchhhccCHHHHHHHHHHHHhcCC
Confidence            002257889999999999998864

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.83  E-value=6e-19  Score=150.57  Aligned_cols=203  Identities=18%  Similarity=0.169  Sum_probs=140.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .++++|||||+|+||.++++.|+++|++|++++| ++....           ..++.++.+|++|++++.++++      
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~-~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADI-HGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEIIEKF   75 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-Cccccc-----------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999998 332211           1367889999999998877654      


Q ss_pred             -CCCEEEEccCCCCC---------------CCCchHHHHHHHHHhHHHHHHHHHHhcC---CccEEEEeccceeeeecCC
Q 020334           78 -GCAGVIHVAAPIDI---------------DGKETEEVMTQRAVNGTIGILKSCLKSG---TVKRFVYTSSGSTVYFSGK  138 (327)
Q Consensus        78 -~~d~vih~a~~~~~---------------~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~v~~~~~~  138 (327)
                       .+|+|||+||....               ..+++ +..+++|+.++..+++++.+.-   ...++|++||...+. +  
T Consensus        76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-~--  151 (266)
T PRK06171         76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAF-DKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE-G--  151 (266)
T ss_pred             CCCCEEEECCcccCCccccccccccccccCCHHHH-HHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC-C--
Confidence             57999999986321               11222 3678999999999988876431   145899999976542 1  


Q ss_pred             CCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCcee-cCCCCCCCCc--------h
Q 020334          139 DVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVV-GPFICPKFAG--------S  206 (327)
Q Consensus       139 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~-G~~~~~~~~~--------~  206 (327)
                                         ......|+.+|...+.+++.++.++   |+++++++||.+- .+........        .
T Consensus       152 -------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~  212 (266)
T PRK06171        152 -------------------SEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGIT  212 (266)
T ss_pred             -------------------CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCC
Confidence                               0223579999999999999888664   8999999999875 2221110000        0


Q ss_pred             HHHHHHHHhC-CccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          207 VRSTLAMVLG-NREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       207 ~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      .......... ...+.     ..+..++|+|+++.+++...
T Consensus       213 ~~~~~~~~~~~~~~p~-----~r~~~~~eva~~~~fl~s~~  248 (266)
T PRK06171        213 VEQLRAGYTKTSTIPL-----GRSGKLSEVADLVCYLLSDR  248 (266)
T ss_pred             HHHHHhhhcccccccC-----CCCCCHHHhhhheeeeeccc
Confidence            0011111110 01111     25678899999999998754

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.83  E-value=4.6e-19  Score=149.95  Aligned_cols=214  Identities=18%  Similarity=0.148  Sum_probs=138.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCC-----
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGC-----   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----   79 (327)
                      ||+||||||+|+||++++++|+++|++|++++|+..+.   +..+...  ...++.++.+|++|++++.++++++     
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~---~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKE---LTKLAEQ--YNSNLTFHSLDLQDVHELETNFNEILSSIQ   75 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHH---HHHHHhc--cCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            36899999999999999999999999999999933122   2222111  1246888999999999888776521     


Q ss_pred             ------CEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcc
Q 020334           80 ------AGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        80 ------d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                            .++||+||....      ...+.....+++|+.++..+++.+    ++.+..++||++||...+..        
T Consensus        76 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------  147 (251)
T PRK06924         76 EDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNP--------  147 (251)
T ss_pred             cccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCC--------
Confidence                  278999986421      111222366778888866555544    33222468999999754310        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH-----cCCcEEEEecCceecCCCCCC---CCchHHHHHHHHh
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE-----HGLDLVTLIPSFVVGPFICPK---FAGSVRSTLAMVL  215 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~i~R~~~v~G~~~~~~---~~~~~~~~~~~~~  215 (327)
                                    .++...|+.+|...+.+++.++.+     .++++..++||.+-.+.....   ....... .....
T Consensus       148 --------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~  212 (251)
T PRK06924        148 --------------YFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTN-LDRFI  212 (251)
T ss_pred             --------------CCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchH-HHHHH
Confidence                          133567999999999999988765     369999999998876531100   0000000 00000


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcC-CCCCceE
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEY-PDAKGRY  252 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~-~~~~~~y  252 (327)
                      .. ..     ...+..++|+|+.++.++.. ....|.+
T Consensus       213 ~~-~~-----~~~~~~~~dva~~~~~l~~~~~~~~G~~  244 (251)
T PRK06924        213 TL-KE-----EGKLLSPEYVAKALRNLLETEDFPNGEV  244 (251)
T ss_pred             HH-hh-----cCCcCCHHHHHHHHHHHHhcccCCCCCE
Confidence            00 00     01468899999999999876 3334433

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.4e-18  Score=147.07  Aligned_cols=208  Identities=16%  Similarity=0.121  Sum_probs=141.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|+++||||+|+||.++++.|+++|++|++++| +....... ..+...   ..++.++.+|++|++++.++++      
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGR-TKEKLEEAKLEIEQF---PGQVLTVQMDVRNPEDVQKMVEQIDEKF   76 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            378999999999999999999999999999999 43322222 122211   2468899999999988877653      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|+|||+||....      +.+.+. ..+++|+.++.++++++.+.    +...++|++||...+.  +         
T Consensus        77 ~~id~lI~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~--~---------  144 (252)
T PRK07677         77 GRIDALINNAAGNFICPAEDLSVNGWN-SVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD--A---------  144 (252)
T ss_pred             CCccEEEECCCCCCCCCcccCCHHHHH-HHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc--C---------
Confidence             57999999985321      122233 78999999999999888532    2136899999875331  0         


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE----HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                 ......|+.+|...+.+.+.++.+    +|++++.++||.+.++......... ......... ...+.
T Consensus       145 -----------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~-~~~~~~~~~-~~~~~  211 (252)
T PRK07677        145 -----------GPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWES-EEAAKRTIQ-SVPLG  211 (252)
T ss_pred             -----------CCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCC-HHHHHHHhc-cCCCC
Confidence                       011346999999999999887765    3799999999999864321111000 111111111 11111


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                           .+...+|+++++..++...
T Consensus       212 -----~~~~~~~va~~~~~l~~~~  230 (252)
T PRK07677        212 -----RLGTPEEIAGLAYFLLSDE  230 (252)
T ss_pred             -----CCCCHHHHHHHHHHHcCcc
Confidence                 4678899999999988653

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.82  E-value=8.9e-19  Score=153.18  Aligned_cols=203  Identities=17%  Similarity=0.154  Sum_probs=142.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++++|||||||.||.+++++|+++|++|++++| +.+....+ ..+...   ...+.++.+|++|++++.++++      
T Consensus         7 ~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R-~~~~l~~~~~~~~~~---g~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (330)
T PRK06139          7 GAVVVITGASSGIGQATAEAFARRGARLVLAAR-DEEALQAVAEECRAL---GAEVLVVPTDVTDADQVKALATQAASFG   82 (330)
T ss_pred             CCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc---CCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999999 43332222 222221   2467788999999998887663      


Q ss_pred             -CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 -GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 -~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                       ++|++|||||.....     ..+...+.+++|+.++.++..++.    +.+ ..++|++||...+..            
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~------------  149 (330)
T PRK06139         83 GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAA------------  149 (330)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCC------------
Confidence             589999999864321     112223679999999888776653    333 468999999765521            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH----GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                .+....|+.+|...+.+.+.+..+.    +++++.+.|+.+.+|...... ..        .+....   
T Consensus       150 ----------~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~-~~--------~~~~~~---  207 (330)
T PRK06139        150 ----------QPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGA-NY--------TGRRLT---  207 (330)
T ss_pred             ----------CCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccc-cc--------cccccc---
Confidence                      1224579999998888777776552    799999999999888532210 00        011100   


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                       ....+..++|+|++++.+++++.
T Consensus       208 -~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        208 -PPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             -CCCCCCCHHHHHHHHHHHHhCCC
Confidence             01246789999999999998764

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.7e-18  Score=147.37  Aligned_cols=210  Identities=13%  Similarity=0.057  Sum_probs=141.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|.||.+++++|+++|++|++++| +....... ..+...  ...++.++.+|++|++++.++++     
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSR-NEENLKKAREKIKSE--SNVDVSYIVADLTKREDLERTVKELKNI   83 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhh--cCCceEEEEecCCCHHHHHHHHHHHHhh
Confidence            3578999999999999999999999999999999 43222221 222111  02468899999999998887765     


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHH----HHHhcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILK----SCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~----~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++||+||....      +.+++. ..+++|+.++..+.+    .+++.+ ..++|++||...+. +          
T Consensus        84 g~iD~lv~nag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~-~----------  150 (263)
T PRK08339         84 GEPDIFFFSTGGPKPGYFMEMSMEDWE-GAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKE-P----------  150 (263)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccC-C----------
Confidence             48999999986431      123344 778899877655554    444444 57999999976542 0          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC-------CchHHHHHHHHhC
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKF-------AGSVRSTLAMVLG  216 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~-------~~~~~~~~~~~~~  216 (327)
                                 .+....|+.+|...+.+.+.++.++   |+++..+.||.+..+......       ............ 
T Consensus       151 -----------~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-  218 (263)
T PRK08339        151 -----------IPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYA-  218 (263)
T ss_pred             -----------CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHh-
Confidence                       0123469999999999999888765   799999999998776311000       000001111111 


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      ...+.     ..+..++|+++++.+++...
T Consensus       219 ~~~p~-----~r~~~p~dva~~v~fL~s~~  243 (263)
T PRK08339        219 KPIPL-----GRLGEPEEIGYLVAFLASDL  243 (263)
T ss_pred             ccCCc-----ccCcCHHHHHHHHHHHhcch
Confidence            11111     25778999999999998753

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.3e-18  Score=147.45  Aligned_cols=207  Identities=20%  Similarity=0.270  Sum_probs=140.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc---hhhhhh-CCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK---DLSFLT-NLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      .+++++||||+|+||.+++++|+++|++|++++|+.+....   .+.... .......++.++.+|+++++++.++++  
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   84 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA   84 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            35789999999999999999999999999999994332111   111110 000112467889999999998877665  


Q ss_pred             -----CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCccc
Q 020334           78 -----GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                           ++|+|||+||.....     ..+.....+++|+.++.++++++...   .+..+++++||....  .   ..   
T Consensus        85 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~--~---~~---  156 (273)
T PRK08278         85 VERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNL--D---PK---  156 (273)
T ss_pred             HHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhc--c---cc---
Confidence                 689999999864321     11122367889999999999988643   113588999885321  0   00   


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCcee-cCCCCCCCCchHHHHHHHHhCCccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVV-GPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                         +         .++...|+.+|...|.+++.++.++   +++++.+.|+.++ .+..            ....+....
T Consensus       157 ---~---------~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~------------~~~~~~~~~  212 (273)
T PRK08278        157 ---W---------FAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAV------------RNLLGGDEA  212 (273)
T ss_pred             ---c---------cCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHH------------Hhccccccc
Confidence               0         1234579999999999999998765   7999999998432 2210            000111111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                      .     ..+..++|++++++.++....
T Consensus       213 ~-----~~~~~p~~va~~~~~l~~~~~  234 (273)
T PRK08278        213 M-----RRSRTPEIMADAAYEILSRPA  234 (273)
T ss_pred             c-----cccCCHHHHHHHHHHHhcCcc
Confidence            1     146788999999999987643

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.82  E-value=4.3e-19  Score=151.09  Aligned_cols=212  Identities=19%  Similarity=0.174  Sum_probs=144.2

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |...+++++||||+|+||.+++++|+++|++|++++| +.+...   .+...  ...++.++.+|+.|.+++.++++   
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~---~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~   74 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDK-SAAGLQ---ELEAA--HGDAVVGVEGDVRSLDDHKEAVARCV   74 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHH---HHHhh--cCCceEEEEeccCCHHHHHHHHHHHH
Confidence            6555789999999999999999999999999999999 432222   22111  02357889999999887766554   


Q ss_pred             ----CCCEEEEccCCCCC-------CC----CchHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCC
Q 020334           78 ----GCAGVIHVAAPIDI-------DG----KETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDV  140 (327)
Q Consensus        78 ----~~d~vih~a~~~~~-------~~----~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~  140 (327)
                          ++|++|||||....       ..    +.+ ++.+++|+.++..+++++.+.-  ...++|++||...+...    
T Consensus        75 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~----  149 (262)
T TIGR03325        75 AAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAF-DEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPN----  149 (262)
T ss_pred             HHhCCCCEEEECCCCCccCCccccCCchhhhHHH-HHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCC----
Confidence                57999999986321       11    123 3788999999999988886531  12578898887654210    


Q ss_pred             CcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCC-C--Cc-hHHH-HHHH
Q 020334          141 DMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPK-F--AG-SVRS-TLAM  213 (327)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~-~--~~-~~~~-~~~~  213 (327)
                                        .....|+.+|...+.+++.++.++  .+++..+.||.+..+..... .  .. .... ....
T Consensus       150 ------------------~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~  211 (262)
T TIGR03325       150 ------------------GGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGD  211 (262)
T ss_pred             ------------------CCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhh
Confidence                              123469999999999999998875  48999999999987743211 0  00 0000 0000


Q ss_pred             HhCCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          214 VLGNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       214 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      ......+.     ..+..++|+++++++++..+
T Consensus       212 ~~~~~~p~-----~r~~~p~eva~~~~~l~s~~  239 (262)
T TIGR03325       212 MLKSVLPI-----GRMPDAEEYTGAYVFFATRG  239 (262)
T ss_pred             hhhhcCCC-----CCCCChHHhhhheeeeecCC
Confidence            00011111     25778999999999988753

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.7e-18  Score=149.86  Aligned_cols=209  Identities=18%  Similarity=0.103  Sum_probs=143.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      ++++|||||+|.||.++++.|+++|++|++++| +......+....   .....+..+.+|++|.+++.++++       
T Consensus         9 gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~l~~~~~~l---~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (296)
T PRK05872          9 GKVVVVTGAARGIGAELARRLHARGAKLALVDL-EEAELAALAAEL---GGDDRVLTVVADVTDLAAMQAAAEEAVERFG   84 (296)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHh---cCCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999 433222211111   112356667799999988876653       


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                      .+|+|||+||....      +.+.+ .+.+++|+.++.++++.+...-  +..+||++||...+...             
T Consensus        85 ~id~vI~nAG~~~~~~~~~~~~~~~-~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-------------  150 (296)
T PRK05872         85 GIDVVVANAGIASGGSVAQVDPDAF-RRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA-------------  150 (296)
T ss_pred             CCCEEEECCCcCCCcCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC-------------
Confidence            57999999997432      11223 3778999999999988876421  13589999997665311             


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                               +....|+.+|...+.+++.++.+   .|++++++.|+.+..+........ ...........+.+..    
T Consensus       151 ---------~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~-~~~~~~~~~~~~~p~~----  216 (296)
T PRK05872        151 ---------PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD-LPAFRELRARLPWPLR----  216 (296)
T ss_pred             ---------CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc-chhHHHHHhhCCCccc----
Confidence                     22457999999999999888754   489999999999887743221111 0111111111111111    


Q ss_pred             CCeeeHHHHHHHHHHhhcCC
Q 020334          227 ISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~  246 (327)
                       .+..++|++++++.++...
T Consensus       217 -~~~~~~~va~~i~~~~~~~  235 (296)
T PRK05872        217 -RTTSVEKCAAAFVDGIERR  235 (296)
T ss_pred             -CCCCHHHHHHHHHHHHhcC
Confidence             4678999999999999764

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.82  E-value=6.7e-19  Score=150.00  Aligned_cols=209  Identities=17%  Similarity=0.150  Sum_probs=142.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .++++|||||+|+||.+++++|+++|++|++++| ++.....+...  .   ..++.++++|++|.+++.++++      
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~--~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLER-SAEKLASLRQR--F---GDHVLVVEGDVTSYADNQRAVDQTVDAF   78 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHH--h---CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence            3579999999999999999999999999999999 43322222111  1   2357889999999988776654      


Q ss_pred             -CCCEEEEccCCCCC--C-----CCc---hHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCCCCCccc
Q 020334           78 -GCAGVIHVAAPIDI--D-----GKE---TEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 -~~d~vih~a~~~~~--~-----~~~---~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                       ++|++||+||....  .     .+.   ..++.+++|+.++..+++++.+.  ....++|++||...+...        
T Consensus        79 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------  150 (263)
T PRK06200         79 GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG--------  150 (263)
T ss_pred             CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC--------
Confidence             58999999996431  1     111   02256789999988888777642  113589999998765311        


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCC-------chHHHHHHHHh
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKFA-------GSVRSTLAMVL  215 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~-------~~~~~~~~~~~  215 (327)
                                    .....|+.+|...+.+++.++.++  ++++..+.||.+..+.......       ...........
T Consensus       151 --------------~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (263)
T PRK06200        151 --------------GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIA  216 (263)
T ss_pred             --------------CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhh
Confidence                          223469999999999999988765  5999999999997764221100       00000011111


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                       ...+.     ..+..++|+++++++++...
T Consensus       217 -~~~p~-----~r~~~~~eva~~~~fl~s~~  241 (263)
T PRK06200        217 -AITPL-----QFAPQPEDHTGPYVLLASRR  241 (263)
T ss_pred             -cCCCC-----CCCCCHHHHhhhhhheeccc
Confidence             11111     25778999999999998754

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.82  E-value=1.6e-18  Score=145.74  Aligned_cols=205  Identities=19%  Similarity=0.208  Sum_probs=137.9

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      |++|||||+|+||++++++|+++|++|+++.|+++...... .....   ...++.++.+|+.|++++.++++       
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGA---LGFDFRVVEGDVSSFESCKAAVAKVEAELG   77 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh---hCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999999988332211111 11111   12468899999999988776554       


Q ss_pred             CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHH----HHhcCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKS----CLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 ~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      .+|+|||+||.....     ..+...+.++.|+.++..+++.    +++.+ .+++|++||..... +            
T Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~-~------------  143 (242)
T TIGR01829        78 PIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQK-G------------  143 (242)
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcC-C------------
Confidence            589999999864311     1122236788999987775554    44444 67999999965331 1            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                               ......|+.+|...+.+++.++++   .+++++.++|+.+.+|......+..    ....... ....   
T Consensus       144 ---------~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~----~~~~~~~-~~~~---  206 (242)
T TIGR01829       144 ---------QFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDV----LNSIVAQ-IPVG---  206 (242)
T ss_pred             ---------CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHH----HHHHHhc-CCCC---
Confidence                     012346999999888888887654   3899999999999987543211111    1111111 1111   


Q ss_pred             CCCeeeHHHHHHHHHHhhcCC
Q 020334          226 NISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~  246 (327)
                        .+...+|+++++.+++..+
T Consensus       207 --~~~~~~~~a~~~~~l~~~~  225 (242)
T TIGR01829       207 --RLGRPEEIAAAVAFLASEE  225 (242)
T ss_pred             --CCcCHHHHHHHHHHHcCch
Confidence              4567899999998887653

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.82  E-value=7.3e-19  Score=147.99  Aligned_cols=163  Identities=23%  Similarity=0.207  Sum_probs=119.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      ||++|||||||+||++++++|+++|++|++++|+. ...  .  ...   ...++.++.+|+.|.+++.+++.       
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~-~~~--~--~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   72 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSR-HPS--L--AAA---AGERLAEVELDLSDAAAAAAWLAGDLLAAF   72 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCc-chh--h--hhc---cCCeEEEEEeccCCHHHHHHHHHHHHHHHh
Confidence            35899999999999999999999999999999943 221  1  010   12468889999999988877432       


Q ss_pred             ----CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCccc
Q 020334           78 ----GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 ----~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                          .+|++||+|+.....      ..+.....+++|+.++..+.+.+.+.   ...+++|++||...+..         
T Consensus        73 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------  143 (243)
T PRK07023         73 VDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNA---------  143 (243)
T ss_pred             ccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCC---------
Confidence                478999999864321      11122377889999977666655432   11569999999765521         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH--cCCcEEEEecCceecC
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE--HGLDLVTLIPSFVVGP  197 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~i~R~~~v~G~  197 (327)
                                   ..+...|+.+|...|.+++.++.+  .++++.+++|+.+-.+
T Consensus       144 -------------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        144 -------------YAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence                         123457999999999999988864  4899999999988655

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.82  E-value=1.8e-18  Score=147.00  Aligned_cols=208  Identities=16%  Similarity=0.098  Sum_probs=138.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+++||.++++.|++.|++|+++.|++.+..... ..+...  ...++.++.+|++|++++.++++      
T Consensus         8 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (260)
T PRK08416          8 GKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQK--YGIKAKAYPLNILEPETYKELFKKIDEDF   85 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHh--cCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            579999999999999999999999999988876343222221 122111  12467899999999988877664      


Q ss_pred             -CCCEEEEccCCCCC------------CCCchHHHHHHHHHhHHHHHHHH----HHhcCCccEEEEeccceeeeecCCCC
Q 020334           78 -GCAGVIHVAAPIDI------------DGKETEEVMTQRAVNGTIGILKS----CLKSGTVKRFVYTSSGSTVYFSGKDV  140 (327)
Q Consensus        78 -~~d~vih~a~~~~~------------~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~v~~~~~~~~  140 (327)
                       ++|++||+||....            ..+.. ...+++|+.+...+...    +++.+ .++||++||......     
T Consensus        86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----  158 (260)
T PRK08416         86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGL-NNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLVY-----  158 (260)
T ss_pred             CCccEEEECccccccccccccCChhhCCHHHH-HHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEeccccccC-----
Confidence             57999999975320            11122 35677888776655444    44333 469999999653310     


Q ss_pred             CcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCC
Q 020334          141 DMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGN  217 (327)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~  217 (327)
                                       .+....|+.+|...+.+++.++.++   |++++.+.||.+-.+.... .+... ........ 
T Consensus       159 -----------------~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~-~~~~~-~~~~~~~~-  218 (260)
T PRK08416        159 -----------------IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKA-FTNYE-EVKAKTEE-  218 (260)
T ss_pred             -----------------CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhh-ccCCH-HHHHHHHh-
Confidence                             0113469999999999999998875   8999999999886653221 11110 11111111 


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      ..+.     ..+..++|++.++++++...
T Consensus       219 ~~~~-----~r~~~p~~va~~~~~l~~~~  242 (260)
T PRK08416        219 LSPL-----NRMGQPEDLAGACLFLCSEK  242 (260)
T ss_pred             cCCC-----CCCCCHHHHHHHHHHHcChh
Confidence            1111     14778999999999998754

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.82  E-value=3.5e-18  Score=145.72  Aligned_cols=210  Identities=18%  Similarity=0.091  Sum_probs=139.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .++++||||+|+||.+++++|+++|++|++++| +++.... ...+... ....++.++.+|++|.+++.++++      
T Consensus         8 ~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T PRK07062          8 GRVAVVTGGSSGIGLATVELLLEAGASVAICGR-DEERLASAEARLREK-FPGARLLAARCDVLDEADVAAFAAAVEARF   85 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHHhh-CCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            478999999999999999999999999999999 4433222 2222211 011367789999999998876553      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       .+|++||+||....      ..+.+. +.+++|+.+...+.+.+    ++.+ ..++|++||...+..           
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----------  152 (265)
T PRK07062         86 GGVDMLVNNAGQGRVSTFADTTDDAWR-DELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQP-----------  152 (265)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCC-----------
Confidence             57999999986431      112333 67888887766665554    3333 469999999765421           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC------chHHHHHHHHh-C
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFA------GSVRSTLAMVL-G  216 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~------~~~~~~~~~~~-~  216 (327)
                                 .+....|+.+|...+.+++.++.+   .|++++.++||.+..+.....+.      ........... .
T Consensus       153 -----------~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (265)
T PRK07062        153 -----------EPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARK  221 (265)
T ss_pred             -----------CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhc
Confidence                       012346999999988888877765   38999999999987764211000      00111111110 1


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcC
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                      ...+.     ..+..++|+++++++++..
T Consensus       222 ~~~p~-----~r~~~p~~va~~~~~L~s~  245 (265)
T PRK07062        222 KGIPL-----GRLGRPDEAARALFFLASP  245 (265)
T ss_pred             CCCCc-----CCCCCHHHHHHHHHHHhCc
Confidence            11111     1477899999999999875

>TIGR02415 23BDH acetoin reductases

Probab=99.81  E-value=1.9e-18  Score=146.38  Aligned_cols=219  Identities=18%  Similarity=0.165  Sum_probs=144.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      ++++||||+|+||.+++++|++.|++|+++.| ++..... ...+...   ..++.++.+|++|++++.+++.       
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~   76 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADL-NEETAKETAKEINQA---GGKAVAYKLDVSDKDQVFSAIDQAAEKFG   76 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999999999 4322211 1222211   2467889999999998877654       


Q ss_pred             CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 ~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      .+|+|||+|+.....     ......+.+++|+.++..+++++.+    .+..+++|++||.......            
T Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------  144 (254)
T TIGR02415        77 GFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN------------  144 (254)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC------------
Confidence            479999999864321     1122237789999998877665543    2323689999996544211            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc-------hHHHHHHHHhCCc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAG-------SVRSTLAMVLGNR  218 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~-------~~~~~~~~~~~~~  218 (327)
                                +..+.|+.+|...+.+++.++.++   ++++++++|+.+.++........       .+........ ..
T Consensus       145 ----------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  213 (254)
T TIGR02415       145 ----------PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFS-SE  213 (254)
T ss_pred             ----------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHH-hh
Confidence                      124469999999999999887664   79999999998876642110000       0000000000 00


Q ss_pred             cccccccCCCeeeHHHHHHHHHHhhcCCCC--CceEE-Eec
Q 020334          219 EEYSILLNISMVHIDDVARAHIFLLEYPDA--KGRYI-CSS  256 (327)
Q Consensus       219 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~y~-~~~  256 (327)
                      ...     ..+..++|+++++.++++....  .|.++ +.+
T Consensus       214 ~~~-----~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~  249 (254)
T TIGR02415       214 IAL-----GRPSEPEDVAGLVSFLASEDSDYITGQSILVDG  249 (254)
T ss_pred             CCC-----CCCCCHHHHHHHHHhhcccccCCccCcEEEecC
Confidence            111     2478999999999999987542  35444 443

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=1.2e-18  Score=146.19  Aligned_cols=205  Identities=20%  Similarity=0.180  Sum_probs=141.5

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |..++++||||||+|+||+++++.|++.|++|++++| ++.....+ ..+..    ..+++++.+|+.+++.+.++++  
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~   75 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSR-NENKLKRMKKTLSK----YGNIHYVVGDVSSTESARNVIEKA   75 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh----cCCeEEEECCCCCHHHHHHHHHHH
Confidence            5556789999999999999999999999999999999 43332222 11211    1367889999999988876554  


Q ss_pred             -----CCCEEEEccCCCCCCC---CchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 -----GCAGVIHVAAPIDIDG---KETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 -----~~d~vih~a~~~~~~~---~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                           ++|.++|+++......   .+.....++.|+.++..+++.+.+.- ...++|++||..... . .          
T Consensus        76 ~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-~-~----------  143 (238)
T PRK05786         76 AKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIY-K-A----------  143 (238)
T ss_pred             HHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcc-c-C----------
Confidence                 4699999997543211   11123567889998887777766531 135799999865421 0 0          


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                               ..+...|+.+|...+.+++.+..+.   +++++++||++++++....   ..    .......        
T Consensus       144 ---------~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~---~~----~~~~~~~--------  199 (238)
T PRK05786        144 ---------SPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE---RN----WKKLRKL--------  199 (238)
T ss_pred             ---------CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch---hh----hhhhccc--------
Confidence                     1224569999999998888887654   8999999999999974211   00    0000000        


Q ss_pred             CCCeeeHHHHHHHHHHhhcCC
Q 020334          226 NISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      ...++..+|+++++++++..+
T Consensus       200 ~~~~~~~~~va~~~~~~~~~~  220 (238)
T PRK05786        200 GDDMAPPEDFAKVIIWLLTDE  220 (238)
T ss_pred             cCCCCCHHHHHHHHHHHhccc
Confidence            013567899999999998753

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.81  E-value=3.7e-18  Score=162.41  Aligned_cols=221  Identities=20%  Similarity=0.176  Sum_probs=144.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++++|||||+|+||++++++|+++|++|++++| +....... ..+... .....+..+.+|++|.+++.++++      
T Consensus       414 gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r-~~~~~~~~~~~l~~~-~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~  491 (676)
T TIGR02632       414 RRVAFVTGGAGGIGRETARRLAAEGAHVVLADL-NLEAAEAVAAEINGQ-FGAGRAVALKMDVTDEQAVKAAFADVALAY  491 (676)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeC-CHHHHHHHHHHHHhh-cCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999999 43322221 112110 011356788999999998887765      


Q ss_pred             -CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHH----HHhcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKS----CLKSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|+||||||.....      .+.+. ..+++|+.+...+...    +++.+...++|++||...+...          
T Consensus       492 g~iDilV~nAG~~~~~~~~~~~~e~~~-~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~----------  560 (676)
T TIGR02632       492 GGVDIVVNNAGIATSSPFEETTLQEWQ-LNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG----------  560 (676)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC----------
Confidence             589999999964321      12233 6688888887666543    3333323589999997554211          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCcee-cCCCCCCCCc--h-------HHHHHHH
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVV-GPFICPKFAG--S-------VRSTLAM  213 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~-G~~~~~~~~~--~-------~~~~~~~  213 (327)
                                  +....|+.+|...+.+++.++.+.   |++++.++|+.++ |.+.......  .       .......
T Consensus       561 ------------~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~  628 (676)
T TIGR02632       561 ------------KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEH  628 (676)
T ss_pred             ------------CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHH
Confidence                        224579999999999999988764   7999999999987 3322110000  0       0000000


Q ss_pred             HhCCccccccccCCCeeeHHHHHHHHHHhhcCCCC---CceEEEec
Q 020334          214 VLGNREEYSILLNISMVHIDDVARAHIFLLEYPDA---KGRYICSS  256 (327)
Q Consensus       214 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~  256 (327)
                      .. ....+     ..+++++|+|+++.+++.....   +.++++.+
T Consensus       629 ~~-~r~~l-----~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDG  668 (676)
T TIGR02632       629 YA-KRTLL-----KRHIFPADIAEAVFFLASSKSEKTTGCIITVDG  668 (676)
T ss_pred             HH-hcCCc-----CCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence            00 01111     2578999999999998865322   33556654

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3.4e-18  Score=143.58  Aligned_cols=202  Identities=13%  Similarity=0.126  Sum_probs=136.8

Q ss_pred             CCCC-CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCC--hhHHHHHh
Q 020334            1 MEEQ-KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLND--PESFDAAI   76 (327)
Q Consensus         1 m~~~-~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~   76 (327)
                      |..| +++++||||+|+||.+++++|+++|++|++++| ++...... ..+...  ....+.++.+|+.+  .+.+.+++
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~   77 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVAR-HQKKLEKVYDAIVEA--GHPEPFAIRFDLMSAEEKEFEQFA   77 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeC-ChHHHHHHHHHHHHc--CCCCcceEEeeecccchHHHHHHH
Confidence            5444 478999999999999999999999999999999 43322221 222111  01346678899875  33343332


Q ss_pred             --------cCCCEEEEccCCCCC----CCC--chHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCC
Q 020334           77 --------AGCAGVIHVAAPIDI----DGK--ETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKD  139 (327)
Q Consensus        77 --------~~~d~vih~a~~~~~----~~~--~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~  139 (327)
                              .++|+|||+||....    ...  +...+.+++|+.++..+++++.+.   ....+++++||.....  +  
T Consensus        78 ~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~--~--  153 (239)
T PRK08703         78 ATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET--P--  153 (239)
T ss_pred             HHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc--C--
Confidence                    357999999986321    111  112367899999988888777542   1146899999854321  0  


Q ss_pred             CCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc----CCcEEEEecCceecCCCCCCCCchHHHHHHHHh
Q 020334          140 VDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH----GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVL  215 (327)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~  215 (327)
                                        .+....|+.+|...+.+++.++.+.    ++++++++||.+++|......+.          
T Consensus       154 ------------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~----------  205 (239)
T PRK08703        154 ------------------KAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPG----------  205 (239)
T ss_pred             ------------------CCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCC----------
Confidence                              1123469999999999999988765    59999999999999853321111          


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcC
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                       ..  .     ..+...+|++.++.+++..
T Consensus       206 -~~--~-----~~~~~~~~~~~~~~~~~~~  227 (239)
T PRK08703        206 -EA--K-----SERKSYGDVLPAFVWWASA  227 (239)
T ss_pred             -CC--c-----cccCCHHHHHHHHHHHhCc
Confidence             00  0     1356888999999999874

>PRK06484 short chain dehydrogenase; Validated

Probab=99.81  E-value=2.8e-18  Score=160.29  Aligned_cols=217  Identities=18%  Similarity=0.199  Sum_probs=149.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      ++++|||||+|.||.+++++|+++|++|++++| +......+....     ..++..+.+|++|++++.++++       
T Consensus       269 ~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  342 (520)
T PRK06484        269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDR-DAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQARWG  342 (520)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999 433222222111     1356778999999998877664       


Q ss_pred             CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           78 GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        78 ~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                      .+|++|||||....       +.+.+ .+.+++|+.++..+.+++...- ...+||++||...+..              
T Consensus       343 ~id~li~nAg~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  407 (520)
T PRK06484        343 RLDVLVNNAGIAEVFKPSLEQSAEDF-TRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA--------------  407 (520)
T ss_pred             CCCEEEECCCCcCCCCChhhCCHHHH-HHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC--------------
Confidence            47999999986421       11233 3789999999999988877541 1368999999765421              


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                              .++...|+.+|...+.+++.++.++   |++++.+.||.+.++......... ........ ...+..    
T Consensus       408 --------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~-~~~~~~----  473 (520)
T PRK06484        408 --------LPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASG-RADFDSIR-RRIPLG----  473 (520)
T ss_pred             --------CCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhcccc-HHHHHHHH-hcCCCC----
Confidence                    1224579999999999999988764   799999999999887532111000 00011111 111111    


Q ss_pred             CCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          227 ISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                       .+..++|+|+++++++....  ..| .+.+.+.
T Consensus       474 -~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg  506 (520)
T PRK06484        474 -RLGDPEEVAEAIAFLASPAASYVNGATLTVDGG  506 (520)
T ss_pred             -CCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence             46789999999999987542  233 4555544

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.80  E-value=4.9e-18  Score=144.36  Aligned_cols=207  Identities=19%  Similarity=0.093  Sum_probs=136.4

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      |++|||||+|.||.+++++|+++|++|++++| ++.... ....+..    ..++.++.+|++|++++.++++       
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~----~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g   75 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSR-NEENLEKALKELKE----YGEVYAVKADLSDKDDLKNLVKEAWELLG   75 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHh----cCCceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            47999999999999999999999999999999 432221 1222221    1367889999999998877663       


Q ss_pred             CCCEEEEccCCCC-----CC---CCchHHHHHHHHHhHHHHHH----HHHHhcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 GCAGVIHVAAPID-----ID---GKETEEVMTQRAVNGTIGIL----KSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 ~~d~vih~a~~~~-----~~---~~~~~~~~~~~nv~~~~~l~----~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                      ++|++||+||...     ..   .+++. +.+.+|+.++..+.    ..+.+.....+||++||......          
T Consensus        76 ~id~li~naG~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~----------  144 (259)
T PRK08340         76 GIDALVWNAGNVRCEPCMLHEAGYSDWL-EAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP----------  144 (259)
T ss_pred             CCCEEEECCCCCCCCccccccccHHHHH-HHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC----------
Confidence            5899999998642     11   11222 45667776654443    33332222469999999765420          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC-------chHHHH-HHHH
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFA-------GSVRST-LAMV  214 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~-------~~~~~~-~~~~  214 (327)
                                  .++...|+.+|...+.+.+.++.++   |+++..+.||.+-.|.......       ...... ....
T Consensus       145 ------------~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (259)
T PRK08340        145 ------------MPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREV  212 (259)
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHH
Confidence                        1224569999999999999998865   7999999999887764221000       000000 0001


Q ss_pred             hCCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          215 LGNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       215 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      .. ..+.     ..+..++|+|+++.+++...
T Consensus       213 ~~-~~p~-----~r~~~p~dva~~~~fL~s~~  238 (259)
T PRK08340        213 LE-RTPL-----KRTGRWEELGSLIAFLLSEN  238 (259)
T ss_pred             hc-cCCc-----cCCCCHHHHHHHHHHHcCcc
Confidence            11 1111     24778999999999999754

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.80  E-value=8.4e-18  Score=143.06  Aligned_cols=210  Identities=17%  Similarity=0.100  Sum_probs=140.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      ..+++|||||+|+||.+++++|+++|+.|+++.|+....... ...+...   ..++.++.+|++|.+++.++++     
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~   82 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA---GGEAIAVKGDVTVESDVVNLIQTAVKE   82 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc---CCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence            368999999999999999999999999998888843222221 1222211   2457789999999998877654     


Q ss_pred             --CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHH----HHHHHhcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 --GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGI----LKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 --~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l----~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                        ++|++||+|+.....     ..+...+.+++|+.++..+    ++.+++.+...++|++||...+.       +    
T Consensus        83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~-------~----  151 (261)
T PRK08936         83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI-------P----  151 (261)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC-------C----
Confidence              579999999864321     1122236789998877654    44555543236899999965331       0    


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .++...|+.+|...+.+.+.++.++   +++++.++|+.+.+|.........  ........ ..+.. 
T Consensus       152 -----------~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~--~~~~~~~~-~~~~~-  216 (261)
T PRK08936        152 -----------WPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADP--KQRADVES-MIPMG-  216 (261)
T ss_pred             -----------CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCH--HHHHHHHh-cCCCC-
Confidence                       1234579999988888888776554   899999999999888543221111  11111111 11111 


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCC
Q 020334          224 LLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                          .+..++|+++++.+++...
T Consensus       217 ----~~~~~~~va~~~~~l~s~~  235 (261)
T PRK08936        217 ----YIGKPEEIAAVAAWLASSE  235 (261)
T ss_pred             ----CCcCHHHHHHHHHHHcCcc
Confidence                4778899999999998753

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.80  E-value=8.7e-18  Score=143.06  Aligned_cols=208  Identities=20%  Similarity=0.144  Sum_probs=142.5

Q ss_pred             CCeEEEeCCcc-hhHHHHHHHHHHCCCeEEEEEcCCCCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGTG-FIGSWLIMRLLDHGYFVTTTVRSDPEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      ++++|||||+| .||.++++.|+++|++|++++| +.... .....+..... ..++.++.+|+++++++.++++     
T Consensus        17 ~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         17 GKVVLVTAAAGTGIGSATARRALEEGARVVISDI-HERRLGETADELAAELG-LGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHHhcC-CceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            58899999998 6999999999999999999988 43222 22222221000 1357889999999988877664     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        .+|++|||||....      +.+.+. ..++.|+.++..+++++.+.    +...++|++||...+.  .        
T Consensus        95 ~g~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~--~--------  163 (262)
T PRK07831         95 LGRLDVLVNNAGLGGQTPVVDMTDDEWS-RVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR--A--------  163 (262)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC--C--------
Confidence              57999999986431      112333 67889999998887776532    1135899988864331  0        


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  ..+...|+.+|...+.+++.++.+   +|++++.++|+.+..|........   ......... ..+.
T Consensus       164 ------------~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~---~~~~~~~~~-~~~~  227 (262)
T PRK07831        164 ------------QHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSA---ELLDELAAR-EAFG  227 (262)
T ss_pred             ------------CCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCH---HHHHHHHhc-CCCC
Confidence                        122346999999999999999876   489999999999998853321111   111111111 1121


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                           .+..++|+++++++++...
T Consensus       228 -----r~~~p~~va~~~~~l~s~~  246 (262)
T PRK07831        228 -----RAAEPWEVANVIAFLASDY  246 (262)
T ss_pred             -----CCcCHHHHHHHHHHHcCch
Confidence                 4778899999999998764

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.79  E-value=5e-18  Score=142.52  Aligned_cols=201  Identities=16%  Similarity=0.176  Sum_probs=139.7

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------CC
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-------GC   79 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   79 (327)
                      ||||||+|+||.++++.|+++|++|++++|+........ ..+...   ..++.++.+|++|.+++.++++       .+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ---GGNARLLQFDVADRVACRTLLEADIAEHGAY   77 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc---CCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999988433222221 222211   2468899999999998876654       46


Q ss_pred             CEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH-----hcCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           80 AGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL-----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        80 d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~-----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      |++||++|....      +.+++. ..++.|+.++.++++++.     +.+ .+++|++||...+...            
T Consensus        78 ~~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~------------  143 (239)
T TIGR01831        78 YGVVLNAGITRDAAFPALSEEDWD-IVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGVMGN------------  143 (239)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhccCC------------
Confidence            999999986431      222333 789999999999988652     223 4689999997644211            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                                +....|+.+|...+.+.+.++.+   .|++++.++|+.+.++.... .....   .....  ..++    
T Consensus       144 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~---~~~~~--~~~~----  203 (239)
T TIGR01831       144 ----------RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAE-VEHDL---DEALK--TVPM----  203 (239)
T ss_pred             ----------CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchh-hhHHH---HHHHh--cCCC----
Confidence                      12346999999988888887765   38999999999998775322 11111   11111  1111    


Q ss_pred             CCCeeeHHHHHHHHHHhhcCC
Q 020334          226 NISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~  246 (327)
                       ..+...+|+++++.+++...
T Consensus       204 -~~~~~~~~va~~~~~l~~~~  223 (239)
T TIGR01831       204 -NRMGQPAEVASLAGFLMSDG  223 (239)
T ss_pred             -CCCCCHHHHHHHHHHHcCch
Confidence             14678899999999998754

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=1e-17  Score=141.71  Aligned_cols=205  Identities=18%  Similarity=0.099  Sum_probs=141.3

Q ss_pred             CCeEEEeCCc--chhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGT--GFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +|+++||||+  +.||.+++++|+++|++|++.+| +......+..+.     ..++.++.+|++|+++++++++     
T Consensus         7 ~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r-~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (252)
T PRK06079          7 GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQ-NDRMKKSLQKLV-----DEEDLLVECDVASDESIERAFATIKER   80 (252)
T ss_pred             CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecC-chHHHHHHHhhc-----cCceeEEeCCCCCHHHHHHHHHHHHHH
Confidence            5789999999  79999999999999999999988 322222222221     1357889999999988876653     


Q ss_pred             --CCCEEEEccCCCCC----------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCccc
Q 020334           78 --GCAGVIHVAAPIDI----------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 --~~d~vih~a~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        ++|++||+||....          +.+++. ..+++|+.++..+.+++.+.- +..++|++||..... .        
T Consensus        81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~-~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~-~--------  150 (252)
T PRK06079         81 VGKIDGIVHAIAYAKKEELGGNVTDTSRDGYA-LAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER-A--------  150 (252)
T ss_pred             hCCCCEEEEcccccccccccCCcccCCHHHHH-HHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc-c--------
Confidence              58999999986421          112333 778899999888887766431 135899999865321 0        


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .+....|+.+|...+.+.+.++.++   |++++.+.||.|-.+........  ......... ..+.
T Consensus       151 -------------~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~--~~~~~~~~~-~~p~  214 (252)
T PRK06079        151 -------------IPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGH--KDLLKESDS-RTVD  214 (252)
T ss_pred             -------------CCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCCh--HHHHHHHHh-cCcc
Confidence                         0123469999999999999888764   89999999999987642211111  111111111 1111


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      .     .+..++|+++++.+++...
T Consensus       215 ~-----r~~~pedva~~~~~l~s~~  234 (252)
T PRK06079        215 G-----VGVTIEEVGNTAAFLLSDL  234 (252)
T ss_pred             c-----CCCCHHHHHHHHHHHhCcc
Confidence            1     4778999999999999753

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.2e-17  Score=142.91  Aligned_cols=207  Identities=17%  Similarity=0.175  Sum_probs=137.9

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      |+++||||+|+||.+++++|+++|++|++++| +++.... ...+....  ...+.++.+|+.|++++.++++       
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r-~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDR-DADGLAQTVADARALG--GTVPEHRALDISDYDAVAAFAADIHAAHG   77 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhcC--CCcceEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            47999999999999999999999999999998 4322221 22222110  1234567899999988776554       


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|+|||++|....      +.+++ ...+++|+.++..+++++..    .+...++|++||...+. +           
T Consensus        78 ~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~-~-----------  144 (272)
T PRK07832         78 SMDVVMNIAGISAWGTVDRLTHEQW-RRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV-A-----------  144 (272)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC-C-----------
Confidence            47999999986432      11223 37799999999999998653    22136899999975431 1           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCc----hHHHHHHHHhCCccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAG----SVRSTLAMVLGNREE  220 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~----~~~~~~~~~~~~~~~  220 (327)
                                .+....|+.+|...+.+.+.++.+   .++++++++||.+.+|........    ........ ...   
T Consensus       145 ----------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~---  210 (272)
T PRK07832        145 ----------LPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKW-VDR---  210 (272)
T ss_pred             ----------CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHH-HHh---
Confidence                      012346999999888777766643   489999999999998853321000    00000000 000   


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      +    ....+.++|+|++++.+++.+
T Consensus       211 ~----~~~~~~~~~vA~~~~~~~~~~  232 (272)
T PRK07832        211 F----RGHAVTPEKAAEKILAGVEKN  232 (272)
T ss_pred             c----ccCCCCHHHHHHHHHHHHhcC
Confidence            0    013578999999999999643

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=5.2e-18  Score=143.17  Aligned_cols=197  Identities=21%  Similarity=0.207  Sum_probs=135.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCC--ChhHHHHHh-----
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLN--DPESFDAAI-----   76 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~--d~~~~~~~~-----   76 (327)
                      .++||||||+|+||.+++++|++.|++|++++| ++.....+ ..+....  ..++.++.+|+.  +.+++.+++     
T Consensus        12 ~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r-~~~~~~~~~~~l~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945         12 DRIILVTGAGDGIGREAALTYARHGATVILLGR-TEEKLEAVYDEIEAAG--GPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeC-CHHHHHHHHHHHHhcC--CCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999999999 43322222 2222211  235677788886  555444333     


Q ss_pred             --cCCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcc
Q 020334           77 --AGCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        77 --~~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                        .++|+|||+|+....       ..+.+ .+.+++|+.++.++++++.    +.+ .++||++||......        
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~-~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~--------  158 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVW-QDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQG--------  158 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHH-HHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCC--------
Confidence              368999999986421       11223 3789999999888888764    334 679999999754321        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    ......|+.+|...+.+++.++++.   ++++++++|+.+-++......+.           ..  
T Consensus       159 --------------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~-----------~~--  211 (247)
T PRK08945        159 --------------RANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPG-----------ED--  211 (247)
T ss_pred             --------------CCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCc-----------cc--
Confidence                          0223469999999999999887765   68999999998866532111100           00  


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                           ...+.-.+|+++.+.+++...
T Consensus       212 -----~~~~~~~~~~~~~~~~~~~~~  232 (247)
T PRK08945        212 -----PQKLKTPEDIMPLYLYLMGDD  232 (247)
T ss_pred             -----ccCCCCHHHHHHHHHHHhCcc
Confidence                 013667899999999988654

>PRK05855 short chain dehydrogenase; Validated

Probab=99.79  E-value=7.5e-18  Score=159.63  Aligned_cols=214  Identities=17%  Similarity=0.107  Sum_probs=143.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+++|||||+|+||++++++|+++|++|++++| +......+ ..+...   ..++.++.+|++|++++.++++      
T Consensus       315 ~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDI-DEAAAERTAELIRAA---GAVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             CCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            478999999999999999999999999999999 43322222 222211   2467899999999998877665      


Q ss_pred             -CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 -GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 -~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                       .+|++|||||.....     ..+.....+++|+.++.++++++..    .+...+||++||...+...           
T Consensus       391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------  459 (582)
T PRK05855        391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS-----------  459 (582)
T ss_pred             CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC-----------
Confidence             479999999875421     1122237788999999888876543    2313589999998876411           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC-CchHHHHHHHHhCCcccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKF-AGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 +....|+.+|...+.+++.++.+.   |+++++++||.+-.+...... ................... 
T Consensus       460 -----------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-  527 (582)
T PRK05855        460 -----------RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLY-  527 (582)
T ss_pred             -----------CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhc-
Confidence                       224579999999999988887653   899999999998776422210 0000000000000000000 


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                        .......+|+|++++.++.++.
T Consensus       528 --~~~~~~p~~va~~~~~~~~~~~  549 (582)
T PRK05855        528 --QRRGYGPEKVAKAIVDAVKRNK  549 (582)
T ss_pred             --cccCCCHHHHHHHHHHHHHcCC
Confidence              0023468999999999998764

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.4e-17  Score=142.60  Aligned_cols=229  Identities=18%  Similarity=0.120  Sum_probs=142.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      |+|.++|||| |+||.++++.|. +|++|++++| +...... ...+...   ..++.++.+|++|.+++.++++     
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d~~~i~~~~~~~~~~   74 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADY-NEENLEAAAKTLREA---GFDVSTQEVDVSSRESVKALAATAQTL   74 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeC-CHHHHHHHHHHHHhc---CCeEEEEEeecCCHHHHHHHHHHHHhc
Confidence            5678999998 799999999996 8999999999 4332222 2222211   2367889999999998877664     


Q ss_pred             -CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecC---CCCCcccCCCCCChh
Q 020334           78 -GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSG---KDVDMLDETFWSDED  152 (327)
Q Consensus        78 -~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~---~~~~~~~E~~~~~~~  152 (327)
                       ++|++|||||.... ..++. ..+++|+.++.++++++.+.- ...++|++||........   ..+......+..+..
T Consensus        75 g~id~li~nAG~~~~-~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (275)
T PRK06940         75 GPVTGLVHTAGVSPS-QASPE-AILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELL  152 (275)
T ss_pred             CCCCEEEECCCcCCc-hhhHH-HHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccc
Confidence             58999999996532 23444 889999999999999887541 124567788765432110   000001111000000


Q ss_pred             Hhh---hc--CCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          153 YIR---KL--DIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       153 ~~~---~~--~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                      ...   +.  ..+...|+.||...+.+.+.++.++   |++++.+.||.+..+.........-......... ..+.   
T Consensus       153 ~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~p~---  228 (275)
T PRK06940        153 SLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFA-KSPA---  228 (275)
T ss_pred             ccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhh-hCCc---
Confidence            000   00  0123579999999999988877654   7999999999998874321111100001111111 1111   


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCC
Q 020334          225 LNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                        ..+..++|+|+++.+++...
T Consensus       229 --~r~~~peeia~~~~fL~s~~  248 (275)
T PRK06940        229 --GRPGTPDEIAALAEFLMGPR  248 (275)
T ss_pred             --ccCCCHHHHHHHHHHHcCcc
Confidence              14788999999999998653

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.7e-17  Score=137.62  Aligned_cols=189  Identities=15%  Similarity=0.114  Sum_probs=136.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~   79 (327)
                      |++++||||+|+||++++++|+++|++|++++| ++.....   +..     .+++++.+|+++.+.+.+++.     ++
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r-~~~~~~~---~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~   71 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATAR-DAAALAA---LQA-----LGAEALALDVADPASVAGLAWKLDGEAL   71 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEEC-CHHHHHH---HHh-----ccceEEEecCCCHHHHHHHHHHhcCCCC
Confidence            468999999999999999999999999999999 4332222   221     245788999999998887642     48


Q ss_pred             CEEEEccCCCCC--------CCCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           80 AGVIHVAAPIDI--------DGKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        80 d~vih~a~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                      |+|||+++....        +.+++ ...++.|+.++.++++++.+.  ....+++++||...+... ..          
T Consensus        72 d~vi~~ag~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-~~----------  139 (222)
T PRK06953         72 DAAVYVAGVYGPRTEGVEPITREDF-DAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGD-AT----------  139 (222)
T ss_pred             CEEEECCCcccCCCCCcccCCHHHH-HHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccc-cc----------
Confidence            999999987521        12233 478999999999999888752  113578999986543211 00          


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc-CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCC
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH-GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNIS  228 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (327)
                              ..+...|+.+|...+.+++.++.++ +++++.++|+.+..+....                .         .
T Consensus       140 --------~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~~----------------~---------~  186 (222)
T PRK06953        140 --------GTTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGGA----------------Q---------A  186 (222)
T ss_pred             --------CCCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCCC----------------C---------C
Confidence                    0112369999999999999988765 7999999999988874211                0         2


Q ss_pred             eeeHHHHHHHHHHhhcCCC
Q 020334          229 MVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       229 ~i~v~D~a~~~~~~~~~~~  247 (327)
                      .+..++.+..+..++....
T Consensus       187 ~~~~~~~~~~~~~~~~~~~  205 (222)
T PRK06953        187 ALDPAQSVAGMRRVIAQAT  205 (222)
T ss_pred             CCCHHHHHHHHHHHHHhcC
Confidence            3456777777777765443

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=2.2e-17  Score=141.00  Aligned_cols=207  Identities=15%  Similarity=0.061  Sum_probs=139.9

Q ss_pred             CCeEEEeCCcc--hhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGTG--FIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .|.+|||||++  .||.+++++|++.|++|++.+| +.........+....   .....+.+|++|++++.++++     
T Consensus         7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r-~~~~~~~~~~~~~~~---g~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          7 GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQ-GEALGKRVKPLAESL---GSDFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecC-chHHHHHHHHHHHhc---CCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            47899999997  9999999999999999999888 332222233332111   123568899999998877664     


Q ss_pred             --CCCEEEEccCCCCC----------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCccc
Q 020334           78 --GCAGVIHVAAPIDI----------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 --~~d~vih~a~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        .+|++|||||....          +.+++. ..+++|+.++..+++++...= ...++|++||..... .        
T Consensus        83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~-~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~-~--------  152 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFS-RTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTR-V--------  152 (271)
T ss_pred             hCCCCEEEECCccCCCccccCChhhcCHHHHH-HHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccc-c--------
Confidence              58999999986421          123343 778899999888877665321 125899999965431 0        


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .+....|+.+|...+.+.+.++.++   |++++.+.||.+-.+.... .... ......... ..+.
T Consensus       153 -------------~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~-~~~~-~~~~~~~~~-~~p~  216 (271)
T PRK06505        153 -------------MPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAG-IGDA-RAIFSYQQR-NSPL  216 (271)
T ss_pred             -------------CCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccccccc-Ccch-HHHHHHHhh-cCCc
Confidence                         0123469999999999999888764   7999999999998764221 1110 001111111 1111


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      .     .+..++|+|+++++++...
T Consensus       217 ~-----r~~~peeva~~~~fL~s~~  236 (271)
T PRK06505        217 R-----RTVTIDEVGGSALYLLSDL  236 (271)
T ss_pred             c-----ccCCHHHHHHHHHHHhCcc
Confidence            1     3668999999999998753

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.78  E-value=1.3e-17  Score=142.60  Aligned_cols=211  Identities=14%  Similarity=0.081  Sum_probs=141.9

Q ss_pred             CCCCCCeEEEeCCc--chhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-
Q 020334            1 MEEQKGKVCVTGGT--GFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-   77 (327)
Q Consensus         1 m~~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-   77 (327)
                      |....|+++||||+  +.||.++++.|+++|++|++.+| +......+..+....  ... .++.+|++|.+++.++++ 
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r-~~~~~~~~~~~~~~~--~~~-~~~~~Dv~d~~~v~~~~~~   76 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYL-NEALKKRVEPIAQEL--GSD-YVYELDVSKPEHFKSLAES   76 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEec-CHHHHHHHHHHHHhc--CCc-eEEEecCCCHHHHHHHHHH
Confidence            66667899999997  79999999999999999999988 422122233332111  122 578899999998877654 


Q ss_pred             ------CCCEEEEccCCCCC----------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCC
Q 020334           78 ------GCAGVIHVAAPIDI----------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDV  140 (327)
Q Consensus        78 ------~~d~vih~a~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~  140 (327)
                            ++|++|||||....          +.+++ ...+++|+.++..+.+++.+.= ...++|++||.....      
T Consensus        77 i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~------  149 (274)
T PRK08415         77 LKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAF-NIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK------  149 (274)
T ss_pred             HHHHcCCCCEEEECCccCcccccccccccCCHHHH-HHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc------
Confidence                  57999999986421          11233 3789999999888887666431 125899999864321      


Q ss_pred             CcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCC
Q 020334          141 DMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGN  217 (327)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~  217 (327)
                       +               .+....|+.+|...+.+.+.++.++   |+++..+.||.+..+.... ... ......... .
T Consensus       150 -~---------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~~~-~~~~~~~~~-~  210 (274)
T PRK08415        150 -Y---------------VPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASG-IGD-FRMILKWNE-I  210 (274)
T ss_pred             -C---------------CCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhc-cch-hhHHhhhhh-h
Confidence             0               0123469999999999999888764   7999999999987753211 011 000000000 0


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      ..+.     ..+..++|+++++++++...
T Consensus       211 ~~pl-----~r~~~pedva~~v~fL~s~~  234 (274)
T PRK08415        211 NAPL-----KKNVSIEEVGNSGMYLLSDL  234 (274)
T ss_pred             hCch-----hccCCHHHHHHHHHHHhhhh
Confidence            1111     14678999999999998753

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.78  E-value=9.1e-18  Score=146.33  Aligned_cols=182  Identities=19%  Similarity=0.113  Sum_probs=127.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +++++||||+|+||.+++++|+++|++|++++|+..........+.... ...++.++.+|+.|.+++.++++       
T Consensus        14 gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~-~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         14 GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAV-PDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-CCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999999999993322222223332211 12368899999999998877654       


Q ss_pred             CCCEEEEccCCCCCC----CCchHHHHHHHHHhHHHHHHHHHHh---cCCccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           78 GCAGVIHVAAPIDID----GKETEEVMTQRAVNGTIGILKSCLK---SGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        78 ~~d~vih~a~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~---~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                      ++|++||+||.....    ..+..+..+++|+.++..+.+.+..   .+ ..++|++||...+. +......++++..  
T Consensus        93 ~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~-~~~~~~~~~~~~~--  168 (313)
T PRK05854         93 PIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARR-GAINWDDLNWERS--  168 (313)
T ss_pred             CccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcC-CCcCccccccccc--
Confidence            489999999865321    1223347899999997777666553   22 36899999976542 1111112222211  


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHH-----cCCcEEEEecCceecCC
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEE-----HGLDLVTLIPSFVVGPF  198 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~i~R~~~v~G~~  198 (327)
                             ..+...|+.||...+.+.+.++++     .+++++.+.||.+..+.
T Consensus       169 -------~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~  214 (313)
T PRK05854        169 -------YAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL  214 (313)
T ss_pred             -------CcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence                   133567999999999999988764     36999999999987664

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=2.9e-17  Score=142.80  Aligned_cols=202  Identities=16%  Similarity=0.121  Sum_probs=136.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+++++||||+|+||.+++++|+++|++|++.++........ ...+...   ..++.++.+|++|.+++.++++     
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~---g~~~~~~~~Dv~d~~~~~~~~~~~~~~   87 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA---GAKAVAVAGDISQRATADELVATAVGL   87 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc---CCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence            368999999999999999999999999999988843322221 2222221   2467889999999988877664     


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcC----------CccEEEEeccceeeeecCCCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSG----------TVKRFVYTSSGSTVYFSGKDV  140 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~----------~~~~~v~~SS~~v~~~~~~~~  140 (327)
                       ++|++||+||....      +.+++. ..+++|+.++..+++++...-          ...++|++||...+. +    
T Consensus        88 g~iD~li~nAG~~~~~~~~~~~~~~~~-~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~----  161 (306)
T PRK07792         88 GGLDIVVNNAGITRDRMLFNMSDEEWD-AVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV-G----  161 (306)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc-C----
Confidence             58999999987542      122333 788999999999988764210          024899999976542 1    


Q ss_pred             CcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCC
Q 020334          141 DMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGN  217 (327)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~  217 (327)
                                       ......|+.+|...+.+++.++.+   +|++++.+.|+. -.+.........    ....   
T Consensus       162 -----------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~----~~~~---  216 (306)
T PRK07792        162 -----------------PVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDA----PDVE---  216 (306)
T ss_pred             -----------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhcccc----chhh---
Confidence                             012346999999999999888765   489999999972 111100000000    0000   


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcC
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                            ......+.++|++.++.+++..
T Consensus       217 ------~~~~~~~~pe~va~~v~~L~s~  238 (306)
T PRK07792        217 ------AGGIDPLSPEHVVPLVQFLASP  238 (306)
T ss_pred             ------hhccCCCCHHHHHHHHHHHcCc
Confidence                  0112456899999999998865

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=4e-17  Score=138.75  Aligned_cols=212  Identities=15%  Similarity=0.077  Sum_probs=139.7

Q ss_pred             CCCC-CCeEEEeCC--cchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc
Q 020334            1 MEEQ-KGKVCVTGG--TGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         1 m~~~-~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      |..+ +++++||||  ++.||.++++.|+++|++|++..| .......+..+...   ......+.+|++|+++++++++
T Consensus         1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~   76 (261)
T PRK08690          1 MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYV-VDKLEERVRKMAAE---LDSELVFRCDVASDDEINQVFA   76 (261)
T ss_pred             CCccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcC-cHHHHHHHHHHHhc---cCCceEEECCCCCHHHHHHHHH
Confidence            5444 478999997  679999999999999999998877 33222333333221   1234578999999998887664


Q ss_pred             -------CCCEEEEccCCCCCC-------C-C--chHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCC
Q 020334           78 -------GCAGVIHVAAPIDID-------G-K--ETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGK  138 (327)
Q Consensus        78 -------~~d~vih~a~~~~~~-------~-~--~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~  138 (327)
                             ++|++|||||.....       . .  +.....+++|+.++..+.+.+...  .+..++|++||..... .  
T Consensus        77 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~-~--  153 (261)
T PRK08690         77 DLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR-A--  153 (261)
T ss_pred             HHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc-C--
Confidence                   589999999875310       0 1  112356788888887776654432  1135899999865431 0  


Q ss_pred             CCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHh
Q 020334          139 DVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVL  215 (327)
Q Consensus       139 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~  215 (327)
                                         .+....|+.+|...+.+.+.++.+   +|++++.+.||.+-.+.... ... .........
T Consensus       154 -------------------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~-~~~-~~~~~~~~~  212 (261)
T PRK08690        154 -------------------IPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASG-IAD-FGKLLGHVA  212 (261)
T ss_pred             -------------------CCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhc-CCc-hHHHHHHHh
Confidence                               122346999999999988887654   48999999999987763221 111 011111111


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      . ..++.     .+..++|+|+++++++...
T Consensus       213 ~-~~p~~-----r~~~peevA~~v~~l~s~~  237 (261)
T PRK08690        213 A-HNPLR-----RNVTIEEVGNTAAFLLSDL  237 (261)
T ss_pred             h-cCCCC-----CCCCHHHHHHHHHHHhCcc
Confidence            1 11121     4778999999999999854

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.77  E-value=3.4e-17  Score=133.54  Aligned_cols=185  Identities=19%  Similarity=0.147  Sum_probs=135.1

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---CCCEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---GCAGV   82 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~v   82 (327)
                      |+++||||+|.||.+++++|+++ ++|++++| ++                   ..+.+|++|+++++++++   ++|++
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r-~~-------------------~~~~~D~~~~~~~~~~~~~~~~id~l   59 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGR-SS-------------------GDVQVDITDPASIRALFEKVGKVDAV   59 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEec-CC-------------------CceEecCCChHHHHHHHHhcCCCCEE
Confidence            37999999999999999999999 99999998 32                   135689999999888776   68999


Q ss_pred             EEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCCChhHhh
Q 020334           83 IHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIR  155 (327)
Q Consensus        83 ih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~  155 (327)
                      ||+||....      ..+++ .+.+++|+.++.++++++.+.- ...+|+++||.....       +             
T Consensus        60 v~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~-------~-------------  118 (199)
T PRK07578         60 VSAAGKVHFAPLAEMTDEDF-NVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE-------P-------------  118 (199)
T ss_pred             EECCCCCCCCchhhCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC-------C-------------
Confidence            999986432      12233 3778999999999998876531 135799999865331       0             


Q ss_pred             hcCCCchhhHhhhHHHHHHHHHHHHH--cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHH
Q 020334          156 KLDIWGKSYVLTKTLTERAALEFAEE--HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHID  233 (327)
Q Consensus       156 ~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  233 (327)
                        .+....|+.+|...+.+.+.++.+  .|++++.+.|+.+-.+..         ....     .  ++   ...++.++
T Consensus       119 --~~~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~---------~~~~-----~--~~---~~~~~~~~  177 (199)
T PRK07578        119 --IPGGASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLE---------KYGP-----F--FP---GFEPVPAA  177 (199)
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchh---------hhhh-----c--CC---CCCCCCHH
Confidence              122346999999999999988775  489999999997744311         0000     0  00   11478999


Q ss_pred             HHHHHHHHhhcCCCCCceEE
Q 020334          234 DVARAHIFLLEYPDAKGRYI  253 (327)
Q Consensus       234 D~a~~~~~~~~~~~~~~~y~  253 (327)
                      |+|++++.+++....+.+++
T Consensus       178 ~~a~~~~~~~~~~~~g~~~~  197 (199)
T PRK07578        178 RVALAYVRSVEGAQTGEVYK  197 (199)
T ss_pred             HHHHHHHHHhccceeeEEec
Confidence            99999999998765555554

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.77  E-value=4.4e-17  Score=139.12  Aligned_cols=206  Identities=18%  Similarity=0.144  Sum_probs=135.3

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHH----HHHh----
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESF----DAAI----   76 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~----~~~~----   76 (327)
                      +.++||||+|+||.+++++|+++|++|+++.|++++....+ ..+...  ...++.++.+|++|.+.+    ++++    
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~   79 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNAR--RPNSAVTCQADLSNSATLFSRCEAIIDACF   79 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhc--cCCceEEEEccCCCchhhHHHHHHHHHHHH
Confidence            57999999999999999999999999998877443332222 222111  013566789999998744    3332    


Q ss_pred             ---cCCCEEEEccCCCCC------CCCc----------hHHHHHHHHHhHHHHHHHHHHhcC---------CccEEEEec
Q 020334           77 ---AGCAGVIHVAAPIDI------DGKE----------TEEVMTQRAVNGTIGILKSCLKSG---------TVKRFVYTS  128 (327)
Q Consensus        77 ---~~~d~vih~a~~~~~------~~~~----------~~~~~~~~nv~~~~~l~~~~~~~~---------~~~~~v~~S  128 (327)
                         .++|+||||||....      ...+          ...+.+++|+.++..+.+++....         ...+++++|
T Consensus        80 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~  159 (267)
T TIGR02685        80 RAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC  159 (267)
T ss_pred             HccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence               258999999986431      1111          123679999999988887654321         123677777


Q ss_pred             cceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCc
Q 020334          129 SGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAG  205 (327)
Q Consensus       129 S~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~  205 (327)
                      |.....       +               .++..+|+.+|...+.+++.++.+   .|++++.++||.+..|...   +.
T Consensus       160 s~~~~~-------~---------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~---~~  214 (267)
T TIGR02685       160 DAMTDQ-------P---------------LLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM---PF  214 (267)
T ss_pred             hhhccC-------C---------------CcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc---ch
Confidence            754221       0               123457999999999999998776   4899999999998766321   11


Q ss_pred             hHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          206 SVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      ....   .... ...+.    ..+..++|+++++++++...
T Consensus       215 ~~~~---~~~~-~~~~~----~~~~~~~~va~~~~~l~~~~  247 (267)
T TIGR02685       215 EVQE---DYRR-KVPLG----QREASAEQIADVVIFLVSPK  247 (267)
T ss_pred             hHHH---HHHH-hCCCC----cCCCCHHHHHHHHHHHhCcc
Confidence            1111   1111 11110    13568999999999998764

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=6.3e-17  Score=137.17  Aligned_cols=209  Identities=13%  Similarity=0.045  Sum_probs=140.2

Q ss_pred             CCeEEEeCCc--chhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGT--GFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .|+++||||+  +.||.+++++|+++|++|++.+| +......+..+..... ..++.++.+|++|+++++++++     
T Consensus         7 ~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (257)
T PRK08594          7 GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYA-GERLEKEVRELADTLE-GQESLLLPCDVTSDEEITACFETIKEE   84 (257)
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecC-cccchHHHHHHHHHcC-CCceEEEecCCCCHHHHHHHHHHHHHh
Confidence            5789999997  89999999999999999999888 3222233333322111 2467889999999998877664     


Q ss_pred             --CCCEEEEccCCCCC----------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCccc
Q 020334           78 --GCAGVIHVAAPIDI----------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 --~~d~vih~a~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        ++|++|||||....          +.+.+. ..+++|+.++..+.+++.+.- ...++|++||.....       +  
T Consensus        85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~-------~--  154 (257)
T PRK08594         85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFL-LAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER-------V--  154 (257)
T ss_pred             CCCccEEEECcccCCCCcCCCccccCCHHHHH-HHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc-------C--
Confidence              47999999986421          111233 567889998887777665431 135899999965321       0  


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .+....|+.+|...+.+.+.++.++   |++++.+.||.+-.+.... .... ......... ..+.
T Consensus       155 -------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~-~~~~-~~~~~~~~~-~~p~  218 (257)
T PRK08594        155 -------------VQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKG-VGGF-NSILKEIEE-RAPL  218 (257)
T ss_pred             -------------CCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhh-hccc-cHHHHHHhh-cCCc
Confidence                         0123469999999999999888654   7999999999987763211 0000 011111111 1111


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                           ..+..++|+++++++++...
T Consensus       219 -----~r~~~p~~va~~~~~l~s~~  238 (257)
T PRK08594        219 -----RRTTTQEEVGDTAAFLFSDL  238 (257)
T ss_pred             -----cccCCHHHHHHHHHHHcCcc
Confidence                 14678999999999998754

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.77  E-value=5.8e-17  Score=139.57  Aligned_cols=219  Identities=16%  Similarity=0.142  Sum_probs=143.0

Q ss_pred             CCCC-CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCC--------CCc-chhhhhhCCCCCCCCeEEEeCCCCChh
Q 020334            1 MEEQ-KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDP--------EHK-KDLSFLTNLPGASERLQIFNADLNDPE   70 (327)
Q Consensus         1 m~~~-~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~   70 (327)
                      |..+ ++++|||||++.||.+++++|++.|++|++++|+.+        +.. .....+...   ..++.++.+|++|.+
T Consensus         1 m~~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dv~~~~   77 (286)
T PRK07791          1 MGLLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA---GGEAVANGDDIADWD   77 (286)
T ss_pred             CCccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc---CCceEEEeCCCCCHH
Confidence            5333 578999999999999999999999999999888431        111 111222211   246788899999998


Q ss_pred             HHHHHhc-------CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cC-----CccEEEEec
Q 020334           71 SFDAAIA-------GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SG-----TVKRFVYTS  128 (327)
Q Consensus        71 ~~~~~~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-----~~~~~v~~S  128 (327)
                      ++.++++       ++|++|||||....      ..+++. ..+++|+.++..+++++..    ..     ...+||++|
T Consensus        78 ~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~is  156 (286)
T PRK07791         78 GAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWD-AVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTS  156 (286)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeC
Confidence            8776653       57999999986431      122333 7899999998888776642    11     024899999


Q ss_pred             cceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCc
Q 020334          129 SGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAG  205 (327)
Q Consensus       129 S~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~  205 (327)
                      |..... +                     .+....|+.+|...+.+.+.++.+   .|++++.+.|+ +..+..    ..
T Consensus       157 S~~~~~-~---------------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~----~~  209 (286)
T PRK07791        157 SGAGLQ-G---------------------SVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMT----ET  209 (286)
T ss_pred             chhhCc-C---------------------CCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcc----hh
Confidence            976442 1                     012346999999999999888766   48999999997 432211    11


Q ss_pred             hHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCceE-EEeccc
Q 020334          206 SVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKGRY-ICSSAK  258 (327)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~y-~~~~~~  258 (327)
                      ....    ..... .   .+...+..++|+++++++++....  ..|.+ .+.+..
T Consensus       210 ~~~~----~~~~~-~---~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~  257 (286)
T PRK07791        210 VFAE----MMAKP-E---EGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGK  257 (286)
T ss_pred             hHHH----HHhcC-c---ccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCc
Confidence            1111    11111 0   011135679999999999987532  34443 455443

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.77  E-value=6.5e-17  Score=137.46  Aligned_cols=210  Identities=17%  Similarity=0.110  Sum_probs=140.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---CC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA---GC   79 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~   79 (327)
                      .+++++||||+|.||.++++.|++.|++|++++| ++...... ..+....  ..++.++.+|++|++++.++++   .+
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~g~i   82 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVAR-DADALEALAADLRAAH--GVDVAVHALDLSSPEAREQLAAEAGDI   82 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHhhc--CCceEEEEecCCCHHHHHHHHHHhCCC
Confidence            3589999999999999999999999999999999 43322221 1122110  2467889999999998887665   58


Q ss_pred             CEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           80 AGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        80 d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                      |++|||+|....      ..+++ ...+++|+.+...+++++.    +.+ ..++|++||.....       +       
T Consensus        83 d~lv~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~-------~-------  146 (259)
T PRK06125         83 DILVNNAGAIPGGGLDDVDDAAW-RAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGEN-------P-------  146 (259)
T ss_pred             CEEEECCCCCCCCCcccCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccC-------C-------
Confidence            999999986431      11233 3778999998888777653    333 45899999864321       0       


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCc----hH--HHHHHHHhCCccc
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAG----SV--RSTLAMVLGNREE  220 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~----~~--~~~~~~~~~~~~~  220 (327)
                              ......|+.+|...+.+.+.++.+   .|++++.+.||.+..|........    .+  ........ ...+
T Consensus       147 --------~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  217 (259)
T PRK06125        147 --------DADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELL-AGLP  217 (259)
T ss_pred             --------CCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHh-ccCC
Confidence                    122346899999999999988754   389999999998887631100000    00  00000000 0111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      .     ..+..++|+++++++++...
T Consensus       218 ~-----~~~~~~~~va~~~~~l~~~~  238 (259)
T PRK06125        218 L-----GRPATPEEVADLVAFLASPR  238 (259)
T ss_pred             c-----CCCcCHHHHHHHHHHHcCch
Confidence            1     14678999999999998753

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.77  E-value=1.5e-16  Score=136.35  Aligned_cols=217  Identities=25%  Similarity=0.261  Sum_probs=157.8

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      ++|||||||||+|++++++|+++|++|.++.| +++......         ..+++..+|+.++..+...+++.|.++++
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r-~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~G~~~~~~i   70 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVR-NPEAAAALA---------GGVEVVLGDLRDPKSLVAGAKGVDGVLLI   70 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEe-CHHHHHhhc---------CCcEEEEeccCCHhHHHHHhccccEEEEE
Confidence            46999999999999999999999999999999 554443332         37899999999999999999999999999


Q ss_pred             cCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhH
Q 020334           86 AAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYV  165 (327)
Q Consensus        86 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~  165 (327)
                      .+... ... .   ..........+..+++. .+ .++++++|....-.                        .....|.
T Consensus        71 ~~~~~-~~~-~---~~~~~~~~~~~~a~~a~-~~-~~~~~~~s~~~~~~------------------------~~~~~~~  119 (275)
T COG0702          71 SGLLD-GSD-A---FRAVQVTAVVRAAEAAG-AG-VKHGVSLSVLGADA------------------------ASPSALA  119 (275)
T ss_pred             ecccc-ccc-c---hhHHHHHHHHHHHHHhc-CC-ceEEEEeccCCCCC------------------------CCccHHH
Confidence            88654 222 1   22333445556666555 33 67899988754321                        1245699


Q ss_pred             hhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcC
Q 020334          166 LTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                      .+|..+|..+..    .|++++++|+..+|.......    .  ......+.+......+..+++.++|++.++..++..
T Consensus       120 ~~~~~~e~~l~~----sg~~~t~lr~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~  189 (275)
T COG0702         120 RAKAAVEAALRS----SGIPYTTLRRAAFYLGAGAAF----I--EAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDA  189 (275)
T ss_pred             HHHHHHHHHHHh----cCCCeEEEecCeeeeccchhH----H--HHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcC
Confidence            999999999864    689999999777776643221    1  111112222111122246899999999999999987


Q ss_pred             CCC-CceEEEe-ccccCHHHHHHHHHHhCC
Q 020334          246 PDA-KGRYICS-SAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       246 ~~~-~~~y~~~-~~~~s~~e~~~~i~~~~~  273 (327)
                      +.. +.+|.+. .+..+..++++.+.+..+
T Consensus       190 ~~~~~~~~~l~g~~~~~~~~~~~~l~~~~g  219 (275)
T COG0702         190 PATAGRTYELAGPEALTLAELASGLDYTIG  219 (275)
T ss_pred             CcccCcEEEccCCceecHHHHHHHHHHHhC
Confidence            654 4578765 468999999999999877

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=8.5e-17  Score=136.43  Aligned_cols=205  Identities=17%  Similarity=0.103  Sum_probs=136.6

Q ss_pred             CCeEEEeCCcc--hhHHHHHHHHHHCCCeEEEEEcCCCC-------Ccchhhhh-hCCCCCCCCeEEEeCCCCChhHHHH
Q 020334            5 KGKVCVTGGTG--FIGSWLIMRLLDHGYFVTTTVRSDPE-------HKKDLSFL-TNLPGASERLQIFNADLNDPESFDA   74 (327)
Q Consensus         5 ~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~   74 (327)
                      +++++||||+|  .||.+++++|+++|++|++++|....       .......+ ........++.++.+|++|.+++.+
T Consensus         6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~   85 (256)
T PRK12859          6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKE   85 (256)
T ss_pred             CcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence            57899999995  89999999999999999887642100       01111111 1111113467889999999998877


Q ss_pred             Hhc-------CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecC
Q 020334           75 AIA-------GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSG  137 (327)
Q Consensus        75 ~~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~  137 (327)
                      +++       .+|++||+||....      +.+.+ ...+++|+.++..+..++    ++.+ ..+||++||......  
T Consensus        86 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~--  161 (256)
T PRK12859         86 LLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEEL-DKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQFQGP--  161 (256)
T ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEcccccCCC--
Confidence            664       47999999986431      11223 367899999887775443    3333 469999999754310  


Q ss_pred             CCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHH
Q 020334          138 KDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV  214 (327)
Q Consensus       138 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~  214 (327)
                                          .++...|+.+|...+.+.+.++.+   .+++++.++|+.+-.+...    .......   
T Consensus       162 --------------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~----~~~~~~~---  214 (256)
T PRK12859        162 --------------------MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT----EEIKQGL---  214 (256)
T ss_pred             --------------------CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC----HHHHHHH---
Confidence                                122457999999999999888765   4899999999988765321    1111111   


Q ss_pred             hCCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          215 LGNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       215 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      .. ..++     ..+..++|+++++.+++...
T Consensus       215 ~~-~~~~-----~~~~~~~d~a~~~~~l~s~~  240 (256)
T PRK12859        215 LP-MFPF-----GRIGEPKDAARLIKFLASEE  240 (256)
T ss_pred             Hh-cCCC-----CCCcCHHHHHHHHHHHhCcc
Confidence            11 1111     14567899999999988653

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=9.8e-17  Score=136.16  Aligned_cols=207  Identities=14%  Similarity=0.036  Sum_probs=140.1

Q ss_pred             CCeEEEeCCc--chhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGT--GFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +|+++||||+  +.||.+++++|+++|++|++.+| +......+..+...   ...+.++.+|++|.+++.++++     
T Consensus        10 ~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r-~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~   85 (258)
T PRK07533         10 GKRGLVVGIANEQSIAWGCARAFRALGAELAVTYL-NDKARPYVEPLAEE---LDAPIFLPLDVREPGQLEAVFARIAEE   85 (258)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeC-ChhhHHHHHHHHHh---hccceEEecCcCCHHHHHHHHHHHHHH
Confidence            5789999998  59999999999999999999998 43222223333211   1234678899999998877653     


Q ss_pred             --CCCEEEEccCCCCC----------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCccc
Q 020334           78 --GCAGVIHVAAPIDI----------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 --~~d~vih~a~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        ++|++|||||....          +.+++. ..+++|+.++..+++.+...- ...++|++||.....       +  
T Consensus        86 ~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~-~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~-------~--  155 (258)
T PRK07533         86 WGRLDFLLHSIAFAPKEDLHGRVVDCSREGFA-LAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK-------V--  155 (258)
T ss_pred             cCCCCEEEEcCccCCcccccCCcccCCHHHHH-HHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc-------C--
Confidence              57999999986421          112333 789999999988888765431 125899999854321       0  


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.+.... .... ......... ..+.
T Consensus       156 -------------~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~-~~~~-~~~~~~~~~-~~p~  219 (258)
T PRK07533        156 -------------VENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASG-IDDF-DALLEDAAE-RAPL  219 (258)
T ss_pred             -------------CccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhc-cCCc-HHHHHHHHh-cCCc
Confidence                         0123469999999999998887654   8999999999987764221 1111 111111111 1111


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                           ..+..++|+++++++++...
T Consensus       220 -----~r~~~p~dva~~~~~L~s~~  239 (258)
T PRK07533        220 -----RRLVDIDDVGAVAAFLASDA  239 (258)
T ss_pred             -----CCCCCHHHHHHHHHHHhChh
Confidence                 14678999999999998753

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=6.2e-17  Score=137.43  Aligned_cols=211  Identities=16%  Similarity=0.084  Sum_probs=140.4

Q ss_pred             CCCC-CCeEEEeCCcc--hhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc
Q 020334            1 MEEQ-KGKVCVTGGTG--FIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         1 m~~~-~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      |..+ +++++||||++  .||.++++.|+++|++|++.+| +.........+...   .+.+.++.+|++|+++++++++
T Consensus         1 ~~~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r-~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~   76 (262)
T PRK07984          1 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQ-NDKLKGRVEEFAAQ---LGSDIVLPCDVAEDASIDAMFA   76 (262)
T ss_pred             CcccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEec-chhHHHHHHHHHhc---cCCceEeecCCCCHHHHHHHHH
Confidence            4443 47899999985  9999999999999999998888 32222233333221   1345678899999998887664


Q ss_pred             -------CCCEEEEccCCCCCC-----------CCchHHHHHHHHHhHHHHHHHHHHhc-CCccEEEEeccceeeeecCC
Q 020334           78 -------GCAGVIHVAAPIDID-----------GKETEEVMTQRAVNGTIGILKSCLKS-GTVKRFVYTSSGSTVYFSGK  138 (327)
Q Consensus        78 -------~~d~vih~a~~~~~~-----------~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~v~~~~~~  138 (327)
                             ++|++|||||.....           .+.+ ...+++|+.++..+.+++... .+..++|++||.....    
T Consensus        77 ~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~----  151 (262)
T PRK07984         77 ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGF-KIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER----  151 (262)
T ss_pred             HHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHH-HHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC----
Confidence                   479999999864311           1122 266788999887777766432 1125899999865321    


Q ss_pred             CCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHh
Q 020334          139 DVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVL  215 (327)
Q Consensus       139 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~  215 (327)
                         +               .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.+.... ... .........
T Consensus       152 ---~---------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~-~~~-~~~~~~~~~  211 (262)
T PRK07984        152 ---A---------------IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG-IKD-FRKMLAHCE  211 (262)
T ss_pred             ---C---------------CCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhc-CCc-hHHHHHHHH
Confidence               0               0113469999999999999988764   8999999999887653111 111 111111111


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      .. .+.     ..+..++|+++++++++...
T Consensus       212 ~~-~p~-----~r~~~pedva~~~~~L~s~~  236 (262)
T PRK07984        212 AV-TPI-----RRTVTIEDVGNSAAFLCSDL  236 (262)
T ss_pred             Hc-CCC-----cCCCCHHHHHHHHHHHcCcc
Confidence            11 111     14778999999999998763

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.76  E-value=4.4e-17  Score=138.23  Aligned_cols=209  Identities=14%  Similarity=0.032  Sum_probs=140.5

Q ss_pred             CCCeEEEeCCc--chhHHHHHHHHHHCCCeEEEEEcCCCC--CcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            4 QKGKVCVTGGT--GFIGSWLIMRLLDHGYFVTTTVRSDPE--HKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         4 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      ++++++||||+  +.||.+++++|++.|++|++..|+...  ....+..+...   ...+.++.+|++|++++.++++  
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP---LNPSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc---cCcceEeecCcCCHHHHHHHHHHH
Confidence            35789999986  799999999999999999888773221  12223333221   1346788999999998877664  


Q ss_pred             -----CCCEEEEccCCCC-------C---CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCC
Q 020334           78 -----GCAGVIHVAAPID-------I---DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVD  141 (327)
Q Consensus        78 -----~~d~vih~a~~~~-------~---~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~  141 (327)
                           ++|++|||||...       .   +.+.+ ...+++|+.++..+.+++.+.- ...++|++||.....       
T Consensus        82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~-~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~-------  153 (258)
T PRK07370         82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGF-ARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR-------  153 (258)
T ss_pred             HHHcCCCCEEEEcccccCcccccCcchhhCHHHH-HHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc-------
Confidence                 5899999998642       1   11223 3778999999888877765421 136899999964321       


Q ss_pred             cccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc
Q 020334          142 MLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR  218 (327)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~  218 (327)
                      +               .+....|+.+|...+.+.+.++.++   |++++.+.||.+-.+.... .... ......... .
T Consensus       154 ~---------------~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~-~~~~-~~~~~~~~~-~  215 (258)
T PRK07370        154 A---------------IPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSA-VGGI-LDMIHHVEE-K  215 (258)
T ss_pred             C---------------CcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhc-cccc-hhhhhhhhh-c
Confidence            0               0223469999999999999998765   7999999999997763211 1110 011111111 1


Q ss_pred             cccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          219 EEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       219 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      .++     ..+...+|+++++.+++...
T Consensus       216 ~p~-----~r~~~~~dva~~~~fl~s~~  238 (258)
T PRK07370        216 APL-----RRTVTQTEVGNTAAFLLSDL  238 (258)
T ss_pred             CCc-----CcCCCHHHHHHHHHHHhChh
Confidence            111     14678899999999999754

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.76  E-value=3.9e-17  Score=156.82  Aligned_cols=196  Identities=18%  Similarity=0.174  Sum_probs=142.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++++||||+|+||.+++++|+++|++|++++| +++....+ ..+...   ..++.++.+|+.|.+++.++++      
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVAR-NGEALDELVAEIRAK---GGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999999 43322221 222211   2468889999999998887765      


Q ss_pred             -CCCEEEEccCCCCCC-----C--CchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 -GCAGVIHVAAPIDID-----G--KETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 -~~d~vih~a~~~~~~-----~--~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                       ++|++|||||.....     .  .+.....+++|+.++.++..++    ++.+ .++||++||...+...         
T Consensus       447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~---------  516 (657)
T PRK07201        447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQTNA---------  516 (657)
T ss_pred             CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCC---------
Confidence             589999999864211     1  1123377899999988876665    3344 5799999998776311         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                   +..+.|+.+|...+.+++.++.++   ++++++++||.+..+...+.  .            .  + 
T Consensus       517 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~--~------------~--~-  566 (657)
T PRK07201        517 -------------PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT--K------------R--Y-  566 (657)
T ss_pred             -------------CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc--c------------c--c-
Confidence                         223569999999999999887654   89999999999988753221  0            0  0 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                        .....+.++++|+.++..+...
T Consensus       567 --~~~~~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        567 --NNVPTISPEEAADMVVRAIVEK  588 (657)
T ss_pred             --cCCCCCCHHHHHHHHHHHHHhC
Confidence              0113578999999999987654

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.76  E-value=5.7e-17  Score=134.84  Aligned_cols=167  Identities=21%  Similarity=0.216  Sum_probs=121.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~   79 (327)
                      |++++||||+|+||++++++|+++|++|++++| ++.....+..+       .++.++.+|+.|++++.++++     ++
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~~~~~~~i   72 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVR-GPQQDTALQAL-------PGVHIEKLDMNDPASLDQLLQRLQGQRF   72 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeC-CCcchHHHHhc-------cccceEEcCCCCHHHHHHHHHHhhcCCC
Confidence            468999999999999999999999999999999 44333222211       357788899999988877665     58


Q ss_pred             CEEEEccCCCCCC-------CCchHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           80 AGVIHVAAPIDID-------GKETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        80 d~vih~a~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                      |+|||+||.....       ........+++|+.++..+.+++...-  ....++++||....  ..  ..+        
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~--~~--~~~--------  140 (225)
T PRK08177         73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGS--VE--LPD--------  140 (225)
T ss_pred             CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccc--cc--cCC--------
Confidence            9999999875311       112223667889999988888776431  13578888885321  10  000        


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCC
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPF  198 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~  198 (327)
                             ..+...|+.+|...+.+++.++.++   +++++.++||.+-.+.
T Consensus       141 -------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~  184 (225)
T PRK08177        141 -------GGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM  184 (225)
T ss_pred             -------CCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence                   0123369999999999999987664   6999999999987764

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=8.2e-17  Score=137.55  Aligned_cols=218  Identities=13%  Similarity=0.029  Sum_probs=145.3

Q ss_pred             CCeEEEeCCc--chhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGT--GFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +|++|||||+  +.||.++++.|+++|++|++..| +......+..+...   ......+.+|++|+++++++++     
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r-~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQ-GDALKKRVEPLAAE---LGAFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcC-chHHHHHHHHHHHh---cCCceEEecCCCCHHHHHHHHHHHHHh
Confidence            5789999997  89999999999999999988877 32222333333221   1235678999999998887654     


Q ss_pred             --CCCEEEEccCCCCC----------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCccc
Q 020334           78 --GCAGVIHVAAPIDI----------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 --~~d~vih~a~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        ++|++||+||....          +.+++ ...+++|+.++..+++.+.+.- ...++|++||.....       +  
T Consensus        86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~-~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~-------~--  155 (272)
T PRK08159         86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNF-TMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK-------V--  155 (272)
T ss_pred             cCCCcEEEECCcccCccccccCcccCCHHHH-HHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc-------C--
Confidence              47999999986431          12233 3788999999999988776531 136899999854321       0  


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .+....|+.+|...+.+.+.++.++   |+++..+.||.+..+.... .... ..... ......+.
T Consensus       156 -------------~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~~~~-~~~~~-~~~~~~p~  219 (272)
T PRK08159        156 -------------MPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASG-IGDF-RYILK-WNEYNAPL  219 (272)
T ss_pred             -------------CCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhc-CCcc-hHHHH-HHHhCCcc
Confidence                         1223469999999999999888764   7999999999987653211 1110 00111 11011111


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC--CCceE-EEecc
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD--AKGRY-ICSSA  257 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~y-~~~~~  257 (327)
                      .     .+..++|+|+++++++....  ..|.. .+.+.
T Consensus       220 ~-----r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG  253 (272)
T PRK08159        220 R-----RTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSG  253 (272)
T ss_pred             c-----ccCCHHHHHHHHHHHhCccccCccceEEEECCC
Confidence            1     46789999999999997532  23433 45444

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.76  E-value=1e-16  Score=139.77  Aligned_cols=240  Identities=17%  Similarity=0.118  Sum_probs=143.6

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      +|+++++||||++.||.+++++|+++| ++|++++| +......+ ..+.   ....++.++.+|++|.+++.++++   
T Consensus         1 ~~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r-~~~~~~~~~~~l~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~   76 (314)
T TIGR01289         1 QQKPTVIITGASSGLGLYAAKALAATGEWHVIMACR-DFLKAEQAAKSLG---MPKDSYTIMHLDLGSLDSVRQFVQQFR   76 (314)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeC-CHHHHHHHHHHhc---CCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            367899999999999999999999999 99999999 43322222 1221   112467888999999988776553   


Q ss_pred             ----CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHH----hcC-CccEEEEeccceeeeecCCC--C
Q 020334           78 ----GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCL----KSG-TVKRFVYTSSGSTVYFSGKD--V  140 (327)
Q Consensus        78 ----~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~~~v~~SS~~v~~~~~~~--~  140 (327)
                          ++|++||+||.....      ..+.....+++|+.++..+.+.+.    +.+ ...+||++||...+......  .
T Consensus        77 ~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~  156 (314)
T TIGR01289        77 ESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVP  156 (314)
T ss_pred             HhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCC
Confidence                589999999864311      112223778999999777755544    332 13699999998765311000  0


Q ss_pred             CcccCCCCC-------Ch-hHh-hhcCCCchhhHhhhHHHHHHHHHHHHHc----CCcEEEEecCceecCCCCCCCCchH
Q 020334          141 DMLDETFWS-------DE-DYI-RKLDIWGKSYVLTKTLTERAALEFAEEH----GLDLVTLIPSFVVGPFICPKFAGSV  207 (327)
Q Consensus       141 ~~~~E~~~~-------~~-~~~-~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~R~~~v~G~~~~~~~~~~~  207 (327)
                      .+.+..+..       .. ... .....+...|+.||.....+.+.++++.    +++++.++||.|.............
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~  236 (314)
T TIGR01289       157 PKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLF  236 (314)
T ss_pred             CcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHH
Confidence            001100000       00 000 0001234579999999888888777653    7999999999986432211111111


Q ss_pred             HHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCceEE
Q 020334          208 RSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKGRYI  253 (327)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~y~  253 (327)
                      ........  ....     ..+..+++.++.++.++....  .+|.|.
T Consensus       237 ~~~~~~~~--~~~~-----~~~~~~~~~a~~l~~~~~~~~~~~~g~~~  277 (314)
T TIGR01289       237 RTLFPPFQ--KYIT-----KGYVSEEEAGERLAQVVSDPKLKKSGVYW  277 (314)
T ss_pred             HHHHHHHH--HHHh-----ccccchhhhhhhhHHhhcCcccCCCceee
Confidence            11111000  0000     135678999999998876533  345554

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=1.4e-16  Score=135.22  Aligned_cols=211  Identities=15%  Similarity=0.070  Sum_probs=140.3

Q ss_pred             CCCC-CCeEEEeCC--cchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc
Q 020334            1 MEEQ-KGKVCVTGG--TGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         1 m~~~-~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      |..+ .+++|||||  ++.||.+++++|+++|++|++..|. ......+..+....   +....+.+|++|++++.++++
T Consensus         1 ~~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~   76 (260)
T PRK06997          1 MGFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVG-DRFKDRITEFAAEF---GSDLVFPCDVASDEQIDALFA   76 (260)
T ss_pred             CCccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccc-hHHHHHHHHHHHhc---CCcceeeccCCCHHHHHHHHH
Confidence            4444 478999996  6799999999999999999988762 22223333332211   223468899999998887664


Q ss_pred             -------CCCEEEEccCCCCC-----------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCC
Q 020334           78 -------GCAGVIHVAAPIDI-----------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGK  138 (327)
Q Consensus        78 -------~~d~vih~a~~~~~-----------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~  138 (327)
                             ++|++|||||....           +.+++ ...+++|+.++..+.+++.+.- ...++|++||.....    
T Consensus        77 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~-~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~----  151 (260)
T PRK06997         77 SLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENF-RIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER----  151 (260)
T ss_pred             HHHHHhCCCcEEEEccccCCccccccccchhcCHHHH-HHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc----
Confidence                   58999999986431           11233 3678999999888887766531 136899999865321    


Q ss_pred             CCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHh
Q 020334          139 DVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVL  215 (327)
Q Consensus       139 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~  215 (327)
                         +               .+....|+.+|...+.+.+.++.++   |++++.+.||.+-.+.... ... .........
T Consensus       152 ---~---------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~-~~~-~~~~~~~~~  211 (260)
T PRK06997        152 ---V---------------VPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASG-IKD-FGKILDFVE  211 (260)
T ss_pred             ---C---------------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcc-ccc-hhhHHHHHH
Confidence               0               0123469999999999999888764   7999999999887653211 110 011111111


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      . ..+..     .+..++|+++++.+++...
T Consensus       212 ~-~~p~~-----r~~~pedva~~~~~l~s~~  236 (260)
T PRK06997        212 S-NAPLR-----RNVTIEEVGNVAAFLLSDL  236 (260)
T ss_pred             h-cCccc-----ccCCHHHHHHHHHHHhCcc
Confidence            1 11111     4678999999999999763

>PRK06484 short chain dehydrogenase; Validated

Probab=99.75  E-value=1.1e-16  Score=149.46  Aligned_cols=209  Identities=18%  Similarity=0.190  Sum_probs=143.4

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |...+++++||||++.||.+++++|+++|++|++++| +.........  ..   ..++.++.+|++|++++.++++   
T Consensus         1 ~~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~--~~---~~~~~~~~~D~~~~~~~~~~~~~~~   74 (520)
T PRK06484          1 SKAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADR-NVERARERAD--SL---GPDHHALAMDVSDEAQIREGFEQLH   74 (520)
T ss_pred             CCCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH--Hh---CCceeEEEeccCCHHHHHHHHHHHH
Confidence            4455789999999999999999999999999999999 4332221111  11   2356789999999998877664   


Q ss_pred             ----CCCEEEEccCCCC--------CCCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCC
Q 020334           78 ----GCAGVIHVAAPID--------IDGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVD  141 (327)
Q Consensus        78 ----~~d~vih~a~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~  141 (327)
                          ++|++||+||...        .+.+++ ...+++|+.++..+++++.+.    +...++|++||.......     
T Consensus        75 ~~~g~iD~li~nag~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~-----  148 (520)
T PRK06484         75 REFGRIDVLVNNAGVTDPTMTATLDTTLEEF-ARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL-----  148 (520)
T ss_pred             HHhCCCCEEEECCCcCCCCCcccccCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC-----
Confidence                5899999998631        112233 378999999998888877653    212489999997654211     


Q ss_pred             cccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc
Q 020334          142 MLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR  218 (327)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~  218 (327)
                                       +....|+.+|...+.+.+.++.++   +++++.+.|+.+-.+............ ..... ..
T Consensus       149 -----------------~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~-~~~~~-~~  209 (520)
T PRK06484        149 -----------------PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLD-PSAVR-SR  209 (520)
T ss_pred             -----------------CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhh-hHHHH-hc
Confidence                             123469999999999998887764   799999999988776432110100000 00000 01


Q ss_pred             cccccccCCCeeeHHHHHHHHHHhhcC
Q 020334          219 EEYSILLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       219 ~~~~~~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                      ...     ..+...+|+++++.+++..
T Consensus       210 ~~~-----~~~~~~~~va~~v~~l~~~  231 (520)
T PRK06484        210 IPL-----GRLGRPEEIAEAVFFLASD  231 (520)
T ss_pred             CCC-----CCCcCHHHHHHHHHHHhCc
Confidence            111     1466889999999998875

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=9.7e-17  Score=136.33  Aligned_cols=207  Identities=12%  Similarity=-0.003  Sum_probs=139.1

Q ss_pred             CCeEEEeCCcc--hhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGTG--FIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +|.++||||++  .||.++++.|+++|++|++.+| +......+..+....   ....++.+|++|++++.++++     
T Consensus         8 ~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r-~~~~~~~~~~l~~~~---g~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          8 GKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQ-SEVLEKRVKPLAEEI---GCNFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             CcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeC-chHHHHHHHHHHHhc---CCceEEEccCCCHHHHHHHHHHHHHH
Confidence            57899999997  8999999999999999998888 432222333332211   123457899999998877664     


Q ss_pred             --CCCEEEEccCCCC----------CCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCccc
Q 020334           78 --GCAGVIHVAAPID----------IDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 --~~d~vih~a~~~~----------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        ++|++||+|+...          .+.+++. ..+++|+.++..+++++.+.- ...++|++||..... .        
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~-~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~-~--------  153 (260)
T PRK06603         84 WGSFDFLLHGMAFADKNELKGRYVDTSLENFH-NSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK-V--------  153 (260)
T ss_pred             cCCccEEEEccccCCcccccCccccCCHHHHH-HHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc-C--------
Confidence              4899999998632          1122343 789999999888888654321 125899999965321 0        


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.+.... ... .......... ..+.
T Consensus       154 -------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~~~-~~~~~~~~~~-~~p~  217 (260)
T PRK06603        154 -------------IPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSA-IGD-FSTMLKSHAA-TAPL  217 (260)
T ss_pred             -------------CCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhc-CCC-cHHHHHHHHh-cCCc
Confidence                         0113469999999999999888754   7999999999987763211 011 0111111111 1111


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      .     .+..++|+|+++++++...
T Consensus       218 ~-----r~~~pedva~~~~~L~s~~  237 (260)
T PRK06603        218 K-----RNTTQEDVGGAAVYLFSEL  237 (260)
T ss_pred             C-----CCCCHHHHHHHHHHHhCcc
Confidence            1     4678999999999999753

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.8e-16  Score=132.98  Aligned_cols=184  Identities=15%  Similarity=0.102  Sum_probs=124.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +++++||||+|+||++++++|+++|++|++++|+......   ...     ......+.+|++|.+++.+.+.++|++||
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~~-----~~~~~~~~~D~~~~~~~~~~~~~iDilVn   85 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SND-----ESPNEWIKWECGKEESLDKQLASLDVLIL   85 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hhc-----cCCCeEEEeeCCCHHHHHHhcCCCCEEEE
Confidence            5789999999999999999999999999999994311111   111     01235788999999999988889999999


Q ss_pred             ccCCCCC---CCCchHHHHHHHHHhHHHHHHHHHHhcC------CccEEEEeccceeeeecCCCCCcccCCCCCChhHhh
Q 020334           85 VAAPIDI---DGKETEEVMTQRAVNGTIGILKSCLKSG------TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIR  155 (327)
Q Consensus        85 ~a~~~~~---~~~~~~~~~~~~nv~~~~~l~~~~~~~~------~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~  155 (327)
                      |||....   +.+++. +.+++|+.++..+++++.+.-      ....++..||.....                     
T Consensus        86 nAG~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~---------------------  143 (245)
T PRK12367         86 NHGINPGGRQDPENIN-KALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ---------------------  143 (245)
T ss_pred             CCccCCcCCCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC---------------------
Confidence            9986432   122333 789999999999998765421      122344444433221                     


Q ss_pred             hcCCCchhhHhhhHHHHHHHHHHHH-------HcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCC
Q 020334          156 KLDIWGKSYVLTKTLTERAALEFAE-------EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNIS  228 (327)
Q Consensus       156 ~~~~~~~~Y~~sK~~~e~~~~~~~~-------~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (327)
                        ......|+.||...+.+. .+.+       +.++.+..+.|+.+..+.     .             +        ..
T Consensus       144 --~~~~~~Y~aSKaal~~~~-~l~~~l~~e~~~~~i~v~~~~pg~~~t~~-----~-------------~--------~~  194 (245)
T PRK12367        144 --PALSPSYEISKRLIGQLV-SLKKNLLDKNERKKLIIRKLILGPFRSEL-----N-------------P--------IG  194 (245)
T ss_pred             --CCCCchhHHHHHHHHHHH-HHHHHHHHhhcccccEEEEecCCCccccc-----C-------------c--------cC
Confidence              011235999999875433 3222       247778878887653321     0             0        02


Q ss_pred             eeeHHHHHHHHHHhhcCCC
Q 020334          229 MVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       229 ~i~v~D~a~~~~~~~~~~~  247 (327)
                      .+.++|+|+.++.+++++.
T Consensus       195 ~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        195 IMSADFVAKQILDQANLGL  213 (245)
T ss_pred             CCCHHHHHHHHHHHHhcCC
Confidence            4678999999999997754

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.75  E-value=2.7e-17  Score=139.51  Aligned_cols=206  Identities=16%  Similarity=0.089  Sum_probs=136.3

Q ss_pred             eEEEeCCcchhHHHHHHHHHH----CCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC---
Q 020334            7 KVCVTGGTGFIGSWLIMRLLD----HGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIAG---   78 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---   78 (327)
                      .++||||+|.||.+++++|++    .|++|++++| +...... ...+... ....++.++.+|++|+++++++++.   
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r-~~~~~~~~~~~l~~~-~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   79 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSAR-NDEALRQLKAEIGAE-RSGLRVVRVSLDLGAEAGLEQLLKALRE   79 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEc-CHHHHHHHHHHHHhc-CCCceEEEEEeccCCHHHHHHHHHHHHh
Confidence            589999999999999999997    7999999999 4332222 2222221 0123678899999999988776541   


Q ss_pred             --------CCEEEEccCCCCC-----C---CCchHHHHHHHHHhHHHHHHHHHHhc-----CCccEEEEeccceeeeecC
Q 020334           79 --------CAGVIHVAAPIDI-----D---GKETEEVMTQRAVNGTIGILKSCLKS-----GTVKRFVYTSSGSTVYFSG  137 (327)
Q Consensus        79 --------~d~vih~a~~~~~-----~---~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~~~v~~SS~~v~~~~~  137 (327)
                              .|++||+||....     .   ..+...+.+++|+.++..+.+.+.+.     +..+++|++||...+..  
T Consensus        80 ~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~--  157 (256)
T TIGR01500        80 LPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP--  157 (256)
T ss_pred             ccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC--
Confidence                    2589999986431     1   11223478999999987777655432     11358999999765420  


Q ss_pred             CCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC----CchHHHH
Q 020334          138 KDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKF----AGSVRST  210 (327)
Q Consensus       138 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~----~~~~~~~  210 (327)
                                          .+....|+.+|...+.+++.++.+.   +++++.+.||.+-.+......    .......
T Consensus       158 --------------------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  217 (256)
T TIGR01500       158 --------------------FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKG  217 (256)
T ss_pred             --------------------CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHH
Confidence                                1223569999999999999988764   799999999988765311000    0000000


Q ss_pred             HHHHhCCccccccccCCCeeeHHHHHHHHHHhhcC
Q 020334          211 LAMVLGNREEYSILLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                      ....    .+.     ..+..++|+|++++.++++
T Consensus       218 ~~~~----~~~-----~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       218 LQEL----KAK-----GKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             HHHH----Hhc-----CCCCCHHHHHHHHHHHHhc
Confidence            1000    011     1477899999999999964

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.74  E-value=1.1e-16  Score=139.55  Aligned_cols=197  Identities=19%  Similarity=0.242  Sum_probs=134.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCC--hhHHH---HHhcC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLND--PESFD---AAIAG   78 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d--~~~~~---~~~~~   78 (327)
                      ++.++||||||+||.+++++|+++|++|++++| +++....+ .++.... ...++..+.+|+++  .+.+.   +.+.+
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVAR-NPDKLKDVSDSIQSKY-SKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEEC-CHHHHHHHHHHHHHHC-CCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            578999999999999999999999999999999 44332222 2222110 01356778899985  33333   33333


Q ss_pred             --CCEEEEccCCCCC-----C--CCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccC
Q 020334           79 --CAGVIHVAAPIDI-----D--GKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        79 --~d~vih~a~~~~~-----~--~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        +|++||+||....     .  ..+.....+++|+.++..+.+++..    .+ ..++|++||...+... .       
T Consensus       131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~-~-------  201 (320)
T PLN02780        131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIP-S-------  201 (320)
T ss_pred             CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCC-C-------
Confidence              5699999986421     1  1112236789999999888887653    33 5799999997654200 0       


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .+....|+.||...+.+.+.++.++   |++++.+.||.+-.+....             ....    
T Consensus       202 ------------~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~-------------~~~~----  252 (320)
T PLN02780        202 ------------DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI-------------RRSS----  252 (320)
T ss_pred             ------------CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc-------------cCCC----
Confidence                        0124579999999999999988764   8999999999987763210             0000    


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                          ......+++|+.++..+..
T Consensus       253 ----~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        253 ----FLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             ----CCCCCHHHHHHHHHHHhCC
Confidence                0134789999999999864

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.74  E-value=3.8e-16  Score=138.73  Aligned_cols=188  Identities=15%  Similarity=0.119  Sum_probs=124.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ++|+++||||+|+||++++++|+++|++|++++| +++....  .....   ...+..+.+|++|++++.+.+.++|++|
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r-~~~~l~~--~~~~~---~~~v~~v~~Dvsd~~~v~~~l~~IDiLI  250 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTS-NSDKITL--EINGE---DLPVKTLHWQVGQEAALAELLEKVDILI  250 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHH--HHhhc---CCCeEEEEeeCCCHHHHHHHhCCCCEEE
Confidence            4689999999999999999999999999999999 3322111  11110   1246788899999999999999999999


Q ss_pred             EccCCCCCCCC--chHHHHHHHHHhHHHHHHHHHHhc----CC---ccEEEEeccceeeeecCCCCCcccCCCCCChhHh
Q 020334           84 HVAAPIDIDGK--ETEEVMTQRAVNGTIGILKSCLKS----GT---VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYI  154 (327)
Q Consensus        84 h~a~~~~~~~~--~~~~~~~~~nv~~~~~l~~~~~~~----~~---~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~  154 (327)
                      |+||.......  +...+.+++|+.++.++++++.+.    +.   ...+|++|++. .  .                  
T Consensus       251 nnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~--~------------------  309 (406)
T PRK07424        251 INHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-V--N------------------  309 (406)
T ss_pred             ECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-c--c------------------
Confidence            99986432211  122478999999999999887542    20   12345555422 1  1                  


Q ss_pred             hhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHH
Q 020334          155 RKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDD  234 (327)
Q Consensus       155 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  234 (327)
                         ......|+.||...+.+........++.+..+.|+    |.....              .+        ...+..+|
T Consensus       310 ---~~~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~g----p~~t~~--------------~~--------~~~~spe~  360 (406)
T PRK07424        310 ---PAFSPLYELSKRALGDLVTLRRLDAPCVVRKLILG----PFKSNL--------------NP--------IGVMSADW  360 (406)
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHhCCCCceEEEEeC----CCcCCC--------------Cc--------CCCCCHHH
Confidence               01123599999999887543222234444444443    322110              00        12468899


Q ss_pred             HHHHHHHhhcCCC
Q 020334          235 VARAHIFLLEYPD  247 (327)
Q Consensus       235 ~a~~~~~~~~~~~  247 (327)
                      +|+.++.++++++
T Consensus       361 vA~~il~~i~~~~  373 (406)
T PRK07424        361 VAKQILKLAKRDF  373 (406)
T ss_pred             HHHHHHHHHHCCC
Confidence            9999999998764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.74  E-value=2.6e-16  Score=144.19  Aligned_cols=214  Identities=17%  Similarity=0.105  Sum_probs=142.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      ++++|||||+|+||.++++.|+++|++|++++| ... ...+..+...    -+..++.+|++|.+++.++++       
T Consensus       210 g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~-~~~-~~~l~~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        210 GKVALVTGAARGIGAAIAEVLARDGAHVVCLDV-PAA-GEALAAVANR----VGGTALALDITAPDAPARIAEHLAERHG  283 (450)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC-Ccc-HHHHHHHHHH----cCCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999999988 321 1222222111    134678899999988877654       


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcC---CccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSG---TVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      ++|+|||+||....      +.+.+ ...+++|+.++.++.+++....   ...+||++||...+...            
T Consensus       284 ~id~vi~~AG~~~~~~~~~~~~~~~-~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~------------  350 (450)
T PRK08261        284 GLDIVVHNAGITRDKTLANMDEARW-DSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN------------  350 (450)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC------------
Confidence            57999999996542      22233 3778999999999999987632   13689999997654211            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                                .....|+.+|...+.+++.++.+   .+++++.+.|+.+-.+... ..+........    ....+.   
T Consensus       351 ----------~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~-~~~~~~~~~~~----~~~~l~---  412 (450)
T PRK08261        351 ----------RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTA-AIPFATREAGR----RMNSLQ---  412 (450)
T ss_pred             ----------CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhh-ccchhHHHHHh----hcCCcC---
Confidence                      22356999999888888877654   4899999999987543211 11111111111    001111   


Q ss_pred             CCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          226 NISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                        ...-.+|+++++.+++....  ..| .+.+.++
T Consensus       413 --~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g~  445 (450)
T PRK08261        413 --QGGLPVDVAETIAWLASPASGGVTGNVVRVCGQ  445 (450)
T ss_pred             --CCCCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence              23457899999999986532  223 4445554

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.5e-16  Score=132.02  Aligned_cols=183  Identities=16%  Similarity=0.097  Sum_probs=133.0

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----CCCEE
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----GCAGV   82 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~v   82 (327)
                      +++||||+|.||+++++.|+++|++|++++| +.+...   .+...    .+++++.+|++|++++.++++    .+|++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r-~~~~~~---~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~id~l   73 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGA-RRDDLE---VAAKE----LDVDAIVCDNTDPASLEEARGLFPHHLDTI   73 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHH---HHHHh----ccCcEEecCCCCHHHHHHHHHHHhhcCcEE
Confidence            6999999999999999999999999999999 432222   11111    145788999999998887765    58999


Q ss_pred             EEccCCCC---------C--CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           83 IHVAAPID---------I--DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        83 ih~a~~~~---------~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                      ||+|+...         .  ..+++ .+.+++|+.++..+++++.+.- ...++|++||.. .                 
T Consensus        74 v~~ag~~~~~~~~~~~~~~~~~~~~-~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~-~-----------------  134 (223)
T PRK05884         74 VNVPAPSWDAGDPRTYSLADTANAW-RNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN-P-----------------  134 (223)
T ss_pred             EECCCccccCCCCcccchhcCHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC-C-----------------
Confidence            99997421         0  11233 4789999999999988876531 135899999853 0                 


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCC
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNI  227 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (327)
                              +....|+.+|...+.+.+.++.++   |++++.+.||.+..+...            ... . .        
T Consensus       135 --------~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~------------~~~-~-~--------  184 (223)
T PRK05884        135 --------PAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYD------------GLS-R-T--------  184 (223)
T ss_pred             --------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhh------------hcc-C-C--------
Confidence                    112469999999999999887754   799999999988654210            000 0 0        


Q ss_pred             CeeeHHHHHHHHHHhhcCC
Q 020334          228 SMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       228 ~~i~v~D~a~~~~~~~~~~  246 (327)
                      +...++|+++++.+++...
T Consensus       185 p~~~~~~ia~~~~~l~s~~  203 (223)
T PRK05884        185 PPPVAAEIARLALFLTTPA  203 (223)
T ss_pred             CCCCHHHHHHHHHHHcCch
Confidence            1227899999999998753

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.73  E-value=1.2e-16  Score=133.13  Aligned_cols=169  Identities=18%  Similarity=0.140  Sum_probs=122.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHh------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAI------   76 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~------   76 (327)
                      .+|.|+|||||..||.+++.+|+++|..++.+.| .....+.+ .++.+..... ++..+++|++|.++..+++      
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar-~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~~~~~~~~   88 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVAR-RARRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKFVEWAIRH   88 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeeh-hhhhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHHHHHHHHh
Confidence            3688999999999999999999999999888888 54455555 4443332222 6999999999999888665      


Q ss_pred             -cCCCEEEEccCCCCC-----CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           77 -AGCAGVIHVAAPIDI-----DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        77 -~~~d~vih~a~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       .++|++||+||....     ......+..+++|+.|+..+.+++.    +.+ ..+||.+||...+..           
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~-----------  156 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMP-----------  156 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccC-----------
Confidence             378999999997541     1222334678999988766666554    444 579999999775521           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCc---EE-EEecCceecC
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLD---LV-TLIPSFVVGP  197 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~---~~-i~R~~~v~G~  197 (327)
                                 .+....|..||.+.+.+...+..+..-.   +. ++-||.|-..
T Consensus       157 -----------~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te  200 (282)
T KOG1205|consen  157 -----------LPFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETE  200 (282)
T ss_pred             -----------CCcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeec
Confidence                       1223479999999999999988776221   21 4677766554

>PRK05599 hypothetical protein; Provisional

Probab=99.73  E-value=6.6e-16  Score=130.14  Aligned_cols=203  Identities=17%  Similarity=0.133  Sum_probs=136.0

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      |+++||||++.||.+++++|+ +|++|++++| +.+....+ ..+...  ....+.++.+|+.|+++++++++       
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   76 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAAR-RPEAAQGLASDLRQR--GATSVHVLSFDAQDLDTHRELVKQTQELAG   76 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeC-CHHHHHHHHHHHHhc--cCCceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence            469999999999999999998 5999999999 43332222 222211  01247889999999988876553       


Q ss_pred             CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHH----HHHHhcCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGIL----KSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 ~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~----~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      ++|++||+||.....     ......+..++|+.+...++    ..+++.+...++|++||...+- +            
T Consensus        77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-~------------  143 (246)
T PRK05599         77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR-A------------  143 (246)
T ss_pred             CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc-C------------
Confidence            589999999875321     11112245667777766544    4444332136899999975431 0            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                               .+....|+.+|...+.+.+.++.+.   +++++.+.||.+..+.....              .+..     
T Consensus       144 ---------~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~--------------~~~~-----  195 (246)
T PRK05599        144 ---------RRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM--------------KPAP-----  195 (246)
T ss_pred             ---------CcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCC--------------CCCC-----
Confidence                     0123469999999999999888764   79999999998877632110              0000     


Q ss_pred             CCCeeeHHHHHHHHHHhhcCCCCCceEEEe
Q 020334          226 NISMVHIDDVARAHIFLLEYPDAKGRYICS  255 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~  255 (327)
                        -...++|+|++++.++..+...+.+...
T Consensus       196 --~~~~pe~~a~~~~~~~~~~~~~~~~~~~  223 (246)
T PRK05599        196 --MSVYPRDVAAAVVSAITSSKRSTTLWIP  223 (246)
T ss_pred             --CCCCHHHHHHHHHHHHhcCCCCceEEeC
Confidence              0246899999999999886544444443

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=6.8e-16  Score=130.84  Aligned_cols=208  Identities=15%  Similarity=0.020  Sum_probs=137.0

Q ss_pred             CCeEEEeCC--cchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGG--TGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +++++||||  ++.||.+++++|+++|++|++++|+...  .....+....  ..++.++.+|++|++++.++++     
T Consensus         7 ~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~--~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~~   82 (256)
T PRK07889          7 GKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRAL--RLTERIAKRL--PEPAPVLELDVTNEEHLASLADRVREH   82 (256)
T ss_pred             CCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccch--hHHHHHHHhc--CCCCcEEeCCCCCHHHHHHHHHHHHHH
Confidence            478999999  8999999999999999999999883211  1112221111  1256789999999998877653     


Q ss_pred             --CCCEEEEccCCCCC-------CCC--chHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI-------DGK--ETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~-------~~~--~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||....       ...  +...+.+++|+.++..+.+.+...= +..++|++|+....+           
T Consensus        83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~-----------  151 (256)
T PRK07889         83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA-----------  151 (256)
T ss_pred             cCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc-----------
Confidence              58999999986421       111  1122568999999888877765421 125788887542110           


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .+....|+.||...+.+.+.++.+   .|++++.+.||.+-.+.... .+.. ......... ..+. 
T Consensus       152 ------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~-~~~~-~~~~~~~~~-~~p~-  215 (256)
T PRK07889        152 ------------WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKA-IPGF-ELLEEGWDE-RAPL-  215 (256)
T ss_pred             ------------CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhc-ccCc-HHHHHHHHh-cCcc-
Confidence                        012345999999999998888765   38999999999998764221 1110 111111111 1111 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                         .+.+..++|+|+++++++...
T Consensus       216 ---~~~~~~p~evA~~v~~l~s~~  236 (256)
T PRK07889        216 ---GWDVKDPTPVARAVVALLSDW  236 (256)
T ss_pred             ---ccccCCHHHHHHHHHHHhCcc
Confidence               113678999999999999764

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.72  E-value=1.3e-15  Score=116.04  Aligned_cols=202  Identities=19%  Similarity=0.185  Sum_probs=142.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      |||.|+||||.+|+.+++++.++||+|++++| ++.+....          +++..++.|+.|++++.+.+.+.|+||..
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivR-n~~K~~~~----------~~~~i~q~Difd~~~~a~~l~g~DaVIsA   69 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVR-NASKLAAR----------QGVTILQKDIFDLTSLASDLAGHDAVISA   69 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEe-ChHhcccc----------ccceeecccccChhhhHhhhcCCceEEEe
Confidence            57999999999999999999999999999999 54443221          46789999999999999999999999988


Q ss_pred             cCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhH
Q 020334           86 AAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYV  165 (327)
Q Consensus        86 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~  165 (327)
                      -+....   ...    +........|++.++..+ +.|++.++.++... -++....++-.+           -|.-.|.
T Consensus        70 ~~~~~~---~~~----~~~~k~~~~li~~l~~ag-v~RllVVGGAGSL~-id~g~rLvD~p~-----------fP~ey~~  129 (211)
T COG2910          70 FGAGAS---DND----ELHSKSIEALIEALKGAG-VPRLLVVGGAGSLE-IDEGTRLVDTPD-----------FPAEYKP  129 (211)
T ss_pred             ccCCCC---Chh----HHHHHHHHHHHHHHhhcC-CeeEEEEcCccceE-EcCCceeecCCC-----------CchhHHH
Confidence            764321   111    222445778888888888 89999998776543 222222222111           2333466


Q ss_pred             hhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcC
Q 020334          166 LTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                      .++..+|. +..+..+..++|+.+-|+-+|-|+.......         .++.........-++|...|.|-+++.-+++
T Consensus       130 ~A~~~ae~-L~~Lr~~~~l~WTfvSPaa~f~PGerTg~yr---------lggD~ll~n~~G~SrIS~aDYAiA~lDe~E~  199 (211)
T COG2910         130 EALAQAEF-LDSLRAEKSLDWTFVSPAAFFEPGERTGNYR---------LGGDQLLVNAKGESRISYADYAIAVLDELEK  199 (211)
T ss_pred             HHHHHHHH-HHHHhhccCcceEEeCcHHhcCCccccCceE---------eccceEEEcCCCceeeeHHHHHHHHHHHHhc
Confidence            66666664 4455445579999999999999965432111         1222222223334899999999999999998


Q ss_pred             CCC
Q 020334          246 PDA  248 (327)
Q Consensus       246 ~~~  248 (327)
                      +..
T Consensus       200 ~~h  202 (211)
T COG2910         200 PQH  202 (211)
T ss_pred             ccc
Confidence            764

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.71  E-value=2.2e-16  Score=126.12  Aligned_cols=162  Identities=22%  Similarity=0.227  Sum_probs=118.0

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchh---hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDL---SFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      ++++||||+|+||.+++++|+++|+ .|+.+.|+........   ..+..   ...++.++.+|+.+++.+.+++.    
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEA---LGAEVTVVACDVADRAALAAALAAIPA   77 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999986 6888888432221111   12211   12467789999999888777654    


Q ss_pred             ---CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 ---GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 ---~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                         .+|+|||+++....      +.+++ ...++.|+.++.++++++++.+ .++++++||.......            
T Consensus        78 ~~~~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~~~~~~------------  143 (180)
T smart00822       78 RLGPLRGVIHAAGVLDDGLLANLTPERF-AAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVAGVLGN------------  143 (180)
T ss_pred             HcCCeeEEEEccccCCccccccCCHHHH-HHhhchHhHHHHHHHHHhccCC-cceEEEEccHHHhcCC------------
Confidence               36999999986431      11223 3778999999999999998766 7899999997543211            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCcee
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVV  195 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~  195 (327)
                                .....|+.+|...+.+++.+. ..+++++.+.|+.+-
T Consensus       144 ----------~~~~~y~~sk~~~~~~~~~~~-~~~~~~~~~~~g~~~  179 (180)
T smart00822      144 ----------PGQANYAAANAFLDALAAHRR-ARGLPATSINWGAWA  179 (180)
T ss_pred             ----------CCchhhHHHHHHHHHHHHHHH-hcCCceEEEeecccc
Confidence                      113469999999999996554 468999999888654

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.1e-15  Score=126.97  Aligned_cols=168  Identities=13%  Similarity=0.065  Sum_probs=118.5

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |...+++++||||++.||.+++++|+++|++|+++.| +...... ...+...   ...+..+.+|+.|++++.++++  
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r-~~~~l~~~~~~i~~~---~~~~~~~~~D~~~~~~~~~~~~~~   76 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQ-DQSALKDTYEQCSAL---TDNVYSFQLKDFSQESIRHLFDAI   76 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHhc---CCCeEEEEccCCCHHHHHHHHHHH
Confidence            5555789999999999999999999999999999999 4333222 2222221   2356788899999998876552  


Q ss_pred             ------CCCEEEEccCCCC----CCCC--chHHHHHHHHHhHHHHHHH----HHHhcCCccEEEEeccceeeeecCCCCC
Q 020334           78 ------GCAGVIHVAAPID----IDGK--ETEEVMTQRAVNGTIGILK----SCLKSGTVKRFVYTSSGSTVYFSGKDVD  141 (327)
Q Consensus        78 ------~~d~vih~a~~~~----~~~~--~~~~~~~~~nv~~~~~l~~----~~~~~~~~~~~v~~SS~~v~~~~~~~~~  141 (327)
                            ++|++||+||...    ....  +...+.++.|+.++..++.    .+++.+....+|++||...+        
T Consensus        77 ~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~--------  148 (227)
T PRK08862         77 EQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH--------  148 (227)
T ss_pred             HHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC--------
Confidence                  5899999997432    1111  1122456778777665544    44433223689999985322        


Q ss_pred             cccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecC
Q 020334          142 MLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGP  197 (327)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~  197 (327)
                                       ++...|+.+|...+.+.+.++.+   +++++..+.||.+-.+
T Consensus       149 -----------------~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        149 -----------------QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             -----------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence                             11235999999999998888765   4899999999988776

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.70  E-value=3.8e-15  Score=125.87  Aligned_cols=217  Identities=16%  Similarity=0.144  Sum_probs=145.4

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      ..+|.++||||+..||.+++++|++.|.+|++.+| +.+.. .....+........++..+.+|+++.+..++++.    
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGR-SEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999 43332 2222222221113568899999998876655442    


Q ss_pred             ----CCCEEEEccCCCC-------CCCCchHHHHHHHHHhH-HHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCc
Q 020334           78 ----GCAGVIHVAAPID-------IDGKETEEVMTQRAVNG-TIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDM  142 (327)
Q Consensus        78 ----~~d~vih~a~~~~-------~~~~~~~~~~~~~nv~~-~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~  142 (327)
                          ++|++|++||...       .+.+.++ ..+++|+.+ ...+...+...   +....++++||...+...      
T Consensus        85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d-~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~------  157 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGALGLTGSILDLSEEVFD-KIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPG------  157 (270)
T ss_pred             HhCCCCCEEEEcCCcCCCCCChhhCCHHHHH-HHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCC------
Confidence                5899999998644       2233444 889999995 55554444432   125688888887654211      


Q ss_pred             ccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC-chHHHHHHHH-hCC
Q 020334          143 LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFA-GSVRSTLAMV-LGN  217 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~-~~~~~~~~~~-~~~  217 (327)
                                     ..+...|+.+|...+++.+.++.++   |+|+..+-||.+..+....... .....+.... ...
T Consensus       158 ---------------~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  222 (270)
T KOG0725|consen  158 ---------------PGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKG  222 (270)
T ss_pred             ---------------CCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhcccc
Confidence                           0111579999999999999988764   8999999999999986111111 1111221110 111


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                      ..+..     .+.-++|++.++.+++....
T Consensus       223 ~~p~g-----r~g~~~eva~~~~fla~~~a  247 (270)
T KOG0725|consen  223 AVPLG-----RVGTPEEVAEAAAFLASDDA  247 (270)
T ss_pred             ccccC-----CccCHHHHHHhHHhhcCccc
Confidence            12222     68899999999999987753

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.70  E-value=4.4e-15  Score=124.29  Aligned_cols=194  Identities=13%  Similarity=0.081  Sum_probs=132.2

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHh---cCCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAI---AGCA   80 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~---~~~d   80 (327)
                      |+|+||||+|+||++++++|+++|  ..|....| +....  .        ...++.++++|++|.++++++.   .++|
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~-~~~~~--~--------~~~~~~~~~~Dls~~~~~~~~~~~~~~id   69 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYR-HHKPD--F--------QHDNVQWHALDVTDEAEIKQLSEQFTQLD   69 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEcc-CCccc--c--------ccCceEEEEecCCCHHHHHHHHHhcCCCC
Confidence            479999999999999999999985  56666666 32111  0        0246788999999998876654   4789


Q ss_pred             EEEEccCCCCCC---------C--CchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCcccCC
Q 020334           81 GVIHVAAPIDID---------G--KETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        81 ~vih~a~~~~~~---------~--~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                      +|||+||.....         .  .+.....+.+|+.++..+.+.+...   ....+++++||...-  .       .+.
T Consensus        70 ~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~--~-------~~~  140 (235)
T PRK09009         70 WLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGS--I-------SDN  140 (235)
T ss_pred             EEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccc--c-------ccC
Confidence            999999975321         0  0112366888988887777766542   114689999873211  0       000


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH-----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE-----HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                      .          .++...|+.+|...+.+++.++.+     .++++..+.||.+.++....     +.        ...+.
T Consensus       141 ~----------~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~-----~~--------~~~~~  197 (235)
T PRK09009        141 R----------LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP-----FQ--------QNVPK  197 (235)
T ss_pred             C----------CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc-----hh--------hcccc
Confidence            0          122347999999999999988865     37889999999988774221     00        00111


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                           ..++..+|+|++++.++....
T Consensus       198 -----~~~~~~~~~a~~~~~l~~~~~  218 (235)
T PRK09009        198 -----GKLFTPEYVAQCLLGIIANAT  218 (235)
T ss_pred             -----CCCCCHHHHHHHHHHHHHcCC
Confidence                 146789999999999998753

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.70  E-value=9.4e-17  Score=125.92  Aligned_cols=275  Identities=15%  Similarity=0.139  Sum_probs=170.0

Q ss_pred             CCCeEEEeCCcchhHHHHHH-----HHHHCC----CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHH
Q 020334            4 QKGKVCVTGGTGFIGSWLIM-----RLLDHG----YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDA   74 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~   74 (327)
                      +..+.+.-+++|+|+.+|.-     ++-+.+    |+|++++| .+.+              .++++-+.|..-..    
T Consensus        11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR-~pg~--------------~ritw~el~~~Gip----   71 (315)
T KOG3019|consen   11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSR-SPGK--------------ARITWPELDFPGIP----   71 (315)
T ss_pred             ccccCCCCccccchhccccCcccccccCCCCcccccceEEEec-CCCC--------------cccccchhcCCCCc----
Confidence            34567788999999988877     554444    89999999 5433              23444333332211    


Q ss_pred             HhcCCCEEEEccCCC-----CCCCCchHHHHHHHHHhHHHHHHHHHHhcCC-ccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           75 AIAGCAGVIHVAAPI-----DIDGKETEEVMTQRAVNGTIGILKSCLKSGT-VKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        75 ~~~~~d~vih~a~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                        -+|+..+++++-.     ..+.....++..-..+..+..|++++..+.. .+.+|.+|..++|  .++...-++|+++
T Consensus        72 --~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y--~pS~s~eY~e~~~  147 (315)
T KOG3019|consen   72 --ISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVY--VPSESQEYSEKIV  147 (315)
T ss_pred             --eehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEe--ccccccccccccc
Confidence              0344444444321     1222222223333344568889999988753 5689999998887  4666677888875


Q ss_pred             CChhHhhhcCCCchhhHhhhH--HHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC
Q 020334          149 SDEDYIRKLDIWGKSYVLTKT--LTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~--~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                      .         . .-.|- +.+  .=|..+....  ...+.+++|.|.|.|.+.+.  ...+....+  .+-+-+++.+.+
T Consensus       148 ~---------q-gfd~~-srL~l~WE~aA~~~~--~~~r~~~iR~GvVlG~gGGa--~~~M~lpF~--~g~GGPlGsG~Q  210 (315)
T KOG3019|consen  148 H---------Q-GFDIL-SRLCLEWEGAALKAN--KDVRVALIRIGVVLGKGGGA--LAMMILPFQ--MGAGGPLGSGQQ  210 (315)
T ss_pred             c---------C-ChHHH-HHHHHHHHHHhhccC--cceeEEEEEEeEEEecCCcc--hhhhhhhhh--hccCCcCCCCCe
Confidence            2         1 11121 121  1122222222  25899999999999987442  111211222  233334666666


Q ss_pred             -CCeeeHHHHHHHHHHhhcCCCCCceEE-EeccccCHHHHHHHHHHhCC---CCCCCCCCCCccc-cccccccc-----C
Q 020334          227 -ISMVHIDDVARAHIFLLEYPDAKGRYI-CSSAKLTIQEMAEFLSAKHP---EYPIPNVDSLSEI-EGYKLSAL-----S  295 (327)
Q Consensus       227 -~~~i~v~D~a~~~~~~~~~~~~~~~y~-~~~~~~s~~e~~~~i~~~~~---~~~~~~~~~~~~~-~~~~~~~~-----d  295 (327)
                       ++|||++|++..+-.+++++...|+.| +.+.+++..|+++.+.++++   .+++|.+..-.-+ .......+     -
T Consensus       211 ~fpWIHv~DL~~li~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~pvP~fvvqA~fG~erA~~vLeGqKV~  290 (315)
T KOG3019|consen  211 WFPWIHVDDLVNLIYEALENPSVKGVINGVAPNPVRNGEFCQQLGSALSRPSWLPVPDFVVQALFGPERATVVLEGQKVL  290 (315)
T ss_pred             eeeeeehHHHHHHHHHHHhcCCCCceecccCCCccchHHHHHHHHHHhCCCcccCCcHHHHHHHhCccceeEEeeCCccc
Confidence             699999999999999999988889999 57889999999999999887   3344432100001 11222333     4


Q ss_pred             hHHHHhccccccc-cHHHHHHHHH
Q 020334          296 SKKLLDICFTYKY-GIDEMFDGAI  318 (327)
Q Consensus       296 ~~k~~~lg~~p~~-~~~~~l~~~~  318 (327)
                      ..|+.++||+.++ .++++++.++
T Consensus       291 Pqral~~Gf~f~yp~vk~Al~~i~  314 (315)
T KOG3019|consen  291 PQRALELGFEFKYPYVKDALRAIM  314 (315)
T ss_pred             chhHhhcCceeechHHHHHHHHHh
Confidence            4555788999998 7888888764

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.69  E-value=7.2e-16  Score=118.28  Aligned_cols=205  Identities=16%  Similarity=0.189  Sum_probs=143.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +.+..+||||+..||+++++.|++.|++|.+.+++........+.+...    .....+.+|+.++.+++..++      
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~----~~h~aF~~DVS~a~~v~~~l~e~~k~~   88 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY----GDHSAFSCDVSKAHDVQNTLEEMEKSL   88 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC----CccceeeeccCcHHHHHHHHHHHHHhc
Confidence            4578899999999999999999999999999999554333333444321    356778899999988776553      


Q ss_pred             -CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHHhc----C-CccEEEEeccceeeeecCCCCCcccC
Q 020334           78 -GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCLKS----G-TVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 -~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                       .++++++|||+..      ...++|+ +.+.+|+.++..+..++.+.    + +.-++|.+||.  .|.-.        
T Consensus        89 g~psvlVncAGItrD~~Llrmkq~qwd-~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSI--VGkiG--------  157 (256)
T KOG1200|consen   89 GTPSVLVNCAGITRDGLLLRMKQEQWD-SVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSI--VGKIG--------  157 (256)
T ss_pred             CCCcEEEEcCccccccceeeccHHHHH-HHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhh--hcccc--------
Confidence             5899999999865      3456777 88999999988877766543    2 23489999995  43111        


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHH----HHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTL----TERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~----~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                  +...+.|+.+|.-    .....+..++ .+|++.++-||.|-.|....-.+..+..+.     ..++.
T Consensus       158 ------------N~GQtnYAAsK~GvIgftktaArEla~-knIrvN~VlPGFI~tpMT~~mp~~v~~ki~-----~~iPm  219 (256)
T KOG1200|consen  158 ------------NFGQTNYAASKGGVIGFTKTAARELAR-KNIRVNVVLPGFIATPMTEAMPPKVLDKIL-----GMIPM  219 (256)
T ss_pred             ------------cccchhhhhhcCceeeeeHHHHHHHhh-cCceEeEeccccccChhhhhcCHHHHHHHH-----ccCCc
Confidence                        1234568888863    3334444444 489999999999988854322222222222     22333


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      +     .+-..+|+|+.++++....
T Consensus       220 g-----r~G~~EevA~~V~fLAS~~  239 (256)
T KOG1200|consen  220 G-----RLGEAEEVANLVLFLASDA  239 (256)
T ss_pred             c-----ccCCHHHHHHHHHHHhccc
Confidence            3     6788999999999998543

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.69  E-value=5.3e-15  Score=122.16  Aligned_cols=200  Identities=12%  Similarity=0.087  Sum_probs=143.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      ++.||||||++.+|+.++.+++++|..+...+.+.....+..+...+.    +++..+.+|++|.+++.+..+       
T Consensus        38 g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~----g~~~~y~cdis~~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   38 GEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI----GEAKAYTCDISDREEIYRLAKKVKKEVG  113 (300)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc----CceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            578999999999999999999999999988998444444445544433    378999999999998876554       


Q ss_pred             CCCEEEEccCCCC-----CCCCchHHHHHHHHHhHHHHH----HHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 GCAGVIHVAAPID-----IDGKETEEVMTQRAVNGTIGI----LKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 ~~d~vih~a~~~~-----~~~~~~~~~~~~~nv~~~~~l----~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      .+|++||+||...     ...++..+.++++|+.+....    +-.+.+.. -.++|.++|...+. +            
T Consensus       114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~-g------------  179 (300)
T KOG1201|consen  114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLF-G------------  179 (300)
T ss_pred             CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhccc-C------------
Confidence            5899999999765     123344458899999886554    44555544 67999999987653 1            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc------CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH------GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                               .+....|..||.++.-..+.+..+.      |++++.+-|+.+-...-..            ....+.   
T Consensus       180 ---------~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~------------~~~~~~---  235 (300)
T KOG1201|consen  180 ---------PAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG------------ATPFPT---  235 (300)
T ss_pred             ---------CccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC------------CCCCcc---
Confidence                     1234579999998877777766442      6888888888665321110            001111   


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCCCC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPDAK  249 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~~~  249 (327)
                         -.+.+..+-+|+.++.++...+..
T Consensus       236 ---l~P~L~p~~va~~Iv~ai~~n~~~  259 (300)
T KOG1201|consen  236 ---LAPLLEPEYVAKRIVEAILTNQAG  259 (300)
T ss_pred             ---ccCCCCHHHHHHHHHHHHHcCCcc
Confidence               136889999999999999886543

>PLN00015 protochlorophyllide reductase

Probab=99.69  E-value=3e-15  Score=130.37  Aligned_cols=234  Identities=15%  Similarity=0.086  Sum_probs=136.9

Q ss_pred             EEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------CC
Q 020334            9 CVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-------GC   79 (327)
Q Consensus         9 lVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   79 (327)
                      +||||++.||.+++++|+++| ++|++.+| +....... ..+.   ....++.++.+|+.|.+++.++++       .+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r-~~~~~~~~~~~l~---~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i   76 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACR-DFLKAERAAKSAG---MPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPL   76 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeC-CHHHHHHHHHHhc---CCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCC
Confidence            699999999999999999999 99999998 43222211 1221   112467888999999998876653       47


Q ss_pred             CEEEEccCCCCC--C----CCchHHHHHHHHHhHHHHHHHHHHh----cCC-ccEEEEeccceeeeecC-CC-CCcccCC
Q 020334           80 AGVIHVAAPIDI--D----GKETEEVMTQRAVNGTIGILKSCLK----SGT-VKRFVYTSSGSTVYFSG-KD-VDMLDET  146 (327)
Q Consensus        80 d~vih~a~~~~~--~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~-~~~~v~~SS~~v~~~~~-~~-~~~~~E~  146 (327)
                      |++||+||....  .    ..+.....+++|+.++..+.+.+.+    .+. .+++|++||...+-... .. ....+-.
T Consensus        77 D~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~  156 (308)
T PLN00015         77 DVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLG  156 (308)
T ss_pred             CEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchh
Confidence            999999986421  1    1122337899999997777665443    221 36999999976431000 00 0000000


Q ss_pred             C----------CCChhHh-hhcCCCchhhHhhhHHHHHHHHHHHHH----cCCcEEEEecCceecCCCCCCCCchHHHHH
Q 020334          147 F----------WSDEDYI-RKLDIWGKSYVLTKTLTERAALEFAEE----HGLDLVTLIPSFVVGPFICPKFAGSVRSTL  211 (327)
Q Consensus       147 ~----------~~~~~~~-~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~  211 (327)
                      +          .....+. .....+...|+.||...+...+.++++    .|++++.+.||.|.................
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~  236 (308)
T PLN00015        157 DLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLF  236 (308)
T ss_pred             hhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHH
Confidence            0          0000000 000123457999999877776777665    379999999999964322111111111110


Q ss_pred             HHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCceEE
Q 020334          212 AMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKGRYI  253 (327)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~y~  253 (327)
                      ....  ....     ..+..+++.|+.++.++....  ..|.|.
T Consensus       237 ~~~~--~~~~-----~~~~~pe~~a~~~~~l~~~~~~~~~G~~~  273 (308)
T PLN00015        237 PPFQ--KYIT-----KGYVSEEEAGKRLAQVVSDPSLTKSGVYW  273 (308)
T ss_pred             HHHH--HHHh-----cccccHHHhhhhhhhhccccccCCCcccc
Confidence            0000  0000     025678999999999876533  344553

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.67  E-value=6.4e-15  Score=127.75  Aligned_cols=215  Identities=19%  Similarity=0.120  Sum_probs=134.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC------cchhhhhhC-CCCCCCCeEEEeCCCCChhHHHHHhc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH------KKDLSFLTN-LPGASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      +|+++||||++.||.+++++|++.|++|++++|+....      ...+..+.. ......++.++.+|++|+++++++++
T Consensus         8 ~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~   87 (305)
T PRK08303          8 GKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVE   87 (305)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            47899999999999999999999999999999942110      111111110 00112357789999999998877654


Q ss_pred             -------CCCEEEEcc-CCC------C-C---CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeee
Q 020334           78 -------GCAGVIHVA-API------D-I---DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYF  135 (327)
Q Consensus        78 -------~~d~vih~a-~~~------~-~---~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~  135 (327)
                             ++|++||+| +..      . .   ..+++. +.+++|+.++..+.+++.+    .+ ..+||++||..... 
T Consensus        88 ~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS~~~~~-  164 (305)
T PRK08303         88 RIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGL-RMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITDGTAEY-  164 (305)
T ss_pred             HHHHHcCCccEEEECCcccccccccCCchhhcCHHHHH-HHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECCccccc-
Confidence                   579999999 631      1 1   112233 6678888887777665543    22 36899999854321 


Q ss_pred             cCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHH
Q 020334          136 SGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLA  212 (327)
Q Consensus       136 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~  212 (327)
                      ...   +               ......|+.+|.....+.+.++.++   |+++..+.||.+-.+.........-.....
T Consensus       165 ~~~---~---------------~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~  226 (305)
T PRK08303        165 NAT---H---------------YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRD  226 (305)
T ss_pred             cCc---C---------------CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhh
Confidence            000   0               0113469999999999988887764   799999999988665311000000000000


Q ss_pred             HHhCCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          213 MVLGNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       213 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      ...  ..+.    ..-+..++|+++++++++..+
T Consensus       227 ~~~--~~p~----~~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        227 ALA--KEPH----FAISETPRYVGRAVAALAADP  254 (305)
T ss_pred             hhc--cccc----cccCCCHHHHHHHHHHHHcCc
Confidence            000  0000    012447899999999999765

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.65  E-value=1.4e-15  Score=120.40  Aligned_cols=150  Identities=25%  Similarity=0.221  Sum_probs=112.9

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcC--CCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRS--DPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      |+++||||+|-||.+++++|+++| +.|+++.|+  .+........+...   ..++.++++|+++.++++++++     
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP---GAKITFIECDLSDPESIRALIEEVIKR   77 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT---TSEEEEEESETTSHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc---ccccccccccccccccccccccccccc
Confidence            579999999999999999999995 577888883  11112222223311   3578999999999998887664     


Q ss_pred             --CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           78 --GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        78 --~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                        .+|++|||+|.....     ..+...+.++.|+.+...+.+++...+ ..++|++||..... +              
T Consensus        78 ~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~-~--------------  141 (167)
T PF00106_consen   78 FGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIAGVR-G--------------  141 (167)
T ss_dssp             HSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGGGTS-S--------------
T ss_pred             cccccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchhhcc-C--------------
Confidence              579999999976521     112334889999999999999998844 68999999976542 0              


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHH
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEE  181 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  181 (327)
                             .+....|+.+|...+.+++.++++
T Consensus       142 -------~~~~~~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  142 -------SPGMSAYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             -------STTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------CCCChhHHHHHHHHHHHHHHHHHh
Confidence                   123457999999999999998876

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.61  E-value=1.6e-13  Score=118.04  Aligned_cols=213  Identities=12%  Similarity=0.019  Sum_probs=134.4

Q ss_pred             CCCCCCeEEEeCC--cchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhh-hhh--------CCCCC--CCCeEEEeCCC-
Q 020334            1 MEEQKGKVCVTGG--TGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLS-FLT--------NLPGA--SERLQIFNADL-   66 (327)
Q Consensus         1 m~~~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~--------~~~~~--~~~~~~~~~D~-   66 (327)
                      |.+.+|++|||||  +..||.++++.|++.|++|++ .|..+ ....+. .+.        .....  ......+.+|+ 
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   82 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVP-ALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV   82 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcc-hhhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence            3445789999999  899999999999999999988 66222 111111 110        00000  01135677888 


Q ss_pred             -CChh------------------HHHHHhc-------CCCEEEEccCCCC--------CCCCchHHHHHHHHHhHHHHHH
Q 020334           67 -NDPE------------------SFDAAIA-------GCAGVIHVAAPID--------IDGKETEEVMTQRAVNGTIGIL  112 (327)
Q Consensus        67 -~d~~------------------~~~~~~~-------~~d~vih~a~~~~--------~~~~~~~~~~~~~nv~~~~~l~  112 (327)
                       .+++                  ++.++++       ++|++|||||...        .+.+++. ..+++|+.++..+.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~-~~~~vN~~~~~~l~  161 (303)
T PLN02730         83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYL-AAISASSYSFVSLL  161 (303)
T ss_pred             cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHH-HHHHHHhHHHHHHH
Confidence             3222                  4554443       5899999996321        1223444 78999999988888


Q ss_pred             HHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc-hhhHhhhHHHHHHHHHHHHHc----CCcE
Q 020334          113 KSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG-KSYVLTKTLTERAALEFAEEH----GLDL  186 (327)
Q Consensus       113 ~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~----~~~~  186 (327)
                      +++...= ...++|++||..... .                     .+.. ..|+.+|...+.+.+.++.++    |+++
T Consensus       162 ~~~~p~m~~~G~II~isS~a~~~-~---------------------~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrV  219 (303)
T PLN02730        162 QHFGPIMNPGGASISLTYIASER-I---------------------IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRV  219 (303)
T ss_pred             HHHHHHHhcCCEEEEEechhhcC-C---------------------CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEE
Confidence            7766531 125899999965431 0                     0112 369999999999999988753    6899


Q ss_pred             EEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          187 VTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       187 ~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      +.+-||.+-.+.... .+.. ......... ..+..     .+..++|++.++++++...
T Consensus       220 n~V~PG~v~T~~~~~-~~~~-~~~~~~~~~-~~pl~-----r~~~peevA~~~~fLaS~~  271 (303)
T PLN02730        220 NTISAGPLGSRAAKA-IGFI-DDMIEYSYA-NAPLQ-----KELTADEVGNAAAFLASPL  271 (303)
T ss_pred             EEEeeCCccCchhhc-cccc-HHHHHHHHh-cCCCC-----CCcCHHHHHHHHHHHhCcc
Confidence            999999988774322 1111 111111111 11111     4678999999999999753

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.60  E-value=8.6e-14  Score=119.43  Aligned_cols=221  Identities=17%  Similarity=0.063  Sum_probs=144.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      .++++||||+..||.+.+++|+.+|.+|+...|+..........+.. .....++.++++|++|..++.++.+       
T Consensus        35 ~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~-~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~  113 (314)
T KOG1208|consen   35 GKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQK-GKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG  113 (314)
T ss_pred             CcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh-cCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence            46899999999999999999999999999999933233333344433 2223578889999999998887654       


Q ss_pred             CCCEEEEccCCCCCC---CCchHHHHHHHHHhHHHHHHHH----HHhcCCccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           78 GCAGVIHVAAPIDID---GKETEEVMTQRAVNGTIGILKS----CLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        78 ~~d~vih~a~~~~~~---~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                      ..|+.|++||.....   ..+-.+..+.+|..|+..|.+.    ++... ..|+|++||..- +....-...-.|.... 
T Consensus       114 ~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~-~~~~~~~~l~~~~~~~-  190 (314)
T KOG1208|consen  114 PLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILG-GGKIDLKDLSGEKAKL-  190 (314)
T ss_pred             CccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccc-cCccchhhccchhccC-
Confidence            469999999976522   2233447889998887666554    44444 379999999653 1111111111222100 


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCC
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNIS  228 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (327)
                             -.....|+.||........+++++.  |+.+..+.||.+.++.... .......+...+...-          
T Consensus       191 -------~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r-~~~~~~~l~~~l~~~~----------  252 (314)
T KOG1208|consen  191 -------YSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR-VNLLLRLLAKKLSWPL----------  252 (314)
T ss_pred             -------ccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec-chHHHHHHHHHHHHHh----------
Confidence                   0112249999999988888888776  6999999999999985443 2222222222211100          


Q ss_pred             eeeHHHHHHHHHHhhcCCC
Q 020334          229 MVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       229 ~i~v~D~a~~~~~~~~~~~  247 (327)
                      +-..+.-|...+.++.++.
T Consensus       253 ~ks~~~ga~t~~~~a~~p~  271 (314)
T KOG1208|consen  253 TKSPEQGAATTCYAALSPE  271 (314)
T ss_pred             ccCHHHHhhheehhccCcc
Confidence            1145677777777777764

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.57  E-value=6.1e-14  Score=117.81  Aligned_cols=199  Identities=18%  Similarity=0.108  Sum_probs=128.9

Q ss_pred             HHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----CCCEEEEccCCCCCCCCch
Q 020334           21 LIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----GCAGVIHVAAPIDIDGKET   96 (327)
Q Consensus        21 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~vih~a~~~~~~~~~~   96 (327)
                      ++++|+++|++|++++| +.....             ...++.+|++|.+++.++++    ++|+|||+||....  ..+
T Consensus         1 ~a~~l~~~G~~Vv~~~r-~~~~~~-------------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~--~~~   64 (241)
T PRK12428          1 TARLLRFLGARVIGVDR-REPGMT-------------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT--APV   64 (241)
T ss_pred             ChHHHHhCCCEEEEEeC-Ccchhh-------------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC--CCH
Confidence            47889999999999999 332211             13567899999999888776    58999999996532  234


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhc-CCccEEEEeccceeeeecCCCCCcccCC----CCCChhHh---hhcCCCchhhHhhh
Q 020334           97 EEVMTQRAVNGTIGILKSCLKS-GTVKRFVYTSSGSTVYFSGKDVDMLDET----FWSDEDYI---RKLDIWGKSYVLTK  168 (327)
Q Consensus        97 ~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~v~~~~~~~~~~~~E~----~~~~~~~~---~~~~~~~~~Y~~sK  168 (327)
                       ...+++|+.++..+++.+.+. ...++||++||...++..  ...+..|.    ........   ....++..+|+.+|
T Consensus        65 -~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  141 (241)
T PRK12428         65 -ELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWP--QRLELHKALAATASFDEGAAWLAAHPVALATGYQLSK  141 (241)
T ss_pred             -HHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccc--cchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHH
Confidence             488999999999999988764 113699999999877421  11111111    00000000   00123356899999


Q ss_pred             HHHHHHHHHHH-HH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhc
Q 020334          169 TLTERAALEFA-EE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLE  244 (327)
Q Consensus       169 ~~~e~~~~~~~-~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  244 (327)
                      ...+.+.+.++ .+   .|++++.++||.+.++..... ......  ........+.     ..+..++|+|+++++++.
T Consensus       142 ~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~-~~~~~~--~~~~~~~~~~-----~~~~~pe~va~~~~~l~s  213 (241)
T PRK12428        142 EALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDF-RSMLGQ--ERVDSDAKRM-----GRPATADEQAAVLVFLCS  213 (241)
T ss_pred             HHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccc-hhhhhh--Hhhhhccccc-----CCCCCHHHHHHHHHHHcC
Confidence            99999988887 33   489999999999998853221 100000  0000000111     135689999999999886


Q ss_pred             CC
Q 020334          245 YP  246 (327)
Q Consensus       245 ~~  246 (327)
                      ..
T Consensus       214 ~~  215 (241)
T PRK12428        214 DA  215 (241)
T ss_pred             hh
Confidence            43

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.57  E-value=8.1e-14  Score=109.96  Aligned_cols=172  Identities=20%  Similarity=0.172  Sum_probs=120.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++|+||||+..||..|+++|++. |.++++..+++++.+  ..++......+++++.++.|+++.+++.++++      
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a--~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV   80 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA--ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV   80 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh--hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence            578999999999999999999975 778777777677664  22222222235799999999999888776654      


Q ss_pred             ---CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHH----HhcC----------CccEEEEeccceee
Q 020334           78 ---GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSC----LKSG----------TVKRFVYTSSGSTV  133 (327)
Q Consensus        78 ---~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~----------~~~~~v~~SS~~v~  133 (327)
                         +.|.++++||....       ..+.+. +.+++|+.++..+.+++    ++..          ....+|++||.+.-
T Consensus        81 g~~GlnlLinNaGi~~~y~~~~~~~r~~~~-~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s  159 (249)
T KOG1611|consen   81 GSDGLNLLINNAGIALSYNTVLKPSRAVLL-EQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS  159 (249)
T ss_pred             ccCCceEEEeccceeeecccccCCcHHHHH-HHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc
Confidence               56999999997541       112233 77999998876665543    3222          12389999986532


Q ss_pred             eecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCC
Q 020334          134 YFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPF  198 (327)
Q Consensus       134 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~  198 (327)
                               +.-..          ..+...|..||.+.....+..+-+.   ++-++.+.||+|-...
T Consensus       160 ---------~~~~~----------~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDM  208 (249)
T KOG1611|consen  160 ---------IGGFR----------PGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDM  208 (249)
T ss_pred             ---------cCCCC----------CcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCC
Confidence                     11111          2345689999999988888876543   6777788999887653

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.56  E-value=1.4e-13  Score=108.61  Aligned_cols=219  Identities=19%  Similarity=0.133  Sum_probs=146.8

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |...+|++++|||.|.||.++.++|+++|..+.++.- +.++......+...- ....+.|+++|+++..++++.++   
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~-~~En~~a~akL~ai~-p~~~v~F~~~DVt~~~~~~~~f~ki~   78 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDD-SEENPEAIAKLQAIN-PSVSVIFIKCDVTNRGDLEAAFDKIL   78 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehh-hhhCHHHHHHHhccC-CCceEEEEEeccccHHHHHHHHHHHH
Confidence            5556899999999999999999999999998887776 444444444443321 13578999999999988888776   


Q ss_pred             ----CCCEEEEccCCCCCCCCchHHHHHHHHHhH----HHHHHHHHHhcC--CccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 ----GCAGVIHVAAPIDIDGKETEEVMTQRAVNG----TIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ----~~d~vih~a~~~~~~~~~~~~~~~~~nv~~----~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                          .+|++||.||...  +.+++ .++.+|+.+    +...+.++.+..  ...-+|.+||.  +|..+.         
T Consensus        79 ~~fg~iDIlINgAGi~~--dkd~e-~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv--~GL~P~---------  144 (261)
T KOG4169|consen   79 ATFGTIDILINGAGILD--DKDWE-RTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSV--AGLDPM---------  144 (261)
T ss_pred             HHhCceEEEEccccccc--chhHH-HhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccc--cccCcc---------
Confidence                4799999999866  33555 888888765    555667766542  45689999994  442211         


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHH-----HHHHcCCcEEEEecCceecCCCC-----CCCCchHHHHHHHHhCC
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALE-----FAEEHGLDLVTLIPSFVVGPFIC-----PKFAGSVRSTLAMVLGN  217 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~-----~~~~~~~~~~i~R~~~v~G~~~~-----~~~~~~~~~~~~~~~~~  217 (327)
                                 +-...|+.||...-.+.++     +-++.|+++..+.||.+-..-..     ..+...-..+...+...
T Consensus       145 -----------p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~  213 (261)
T KOG4169|consen  145 -----------PVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERA  213 (261)
T ss_pred             -----------ccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHc
Confidence                       1123699999755444443     23456999999999876432100     00011111111111111


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCCCCCceEEEec
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYICSS  256 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~  256 (327)
                                +--...+++..++.+++.+..+.+|.++.
T Consensus       214 ----------~~q~~~~~a~~~v~aiE~~~NGaiw~v~~  242 (261)
T KOG4169|consen  214 ----------PKQSPACCAINIVNAIEYPKNGAIWKVDS  242 (261)
T ss_pred             ----------ccCCHHHHHHHHHHHHhhccCCcEEEEec
Confidence                      23466799999999999987777887654

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.56  E-value=3.8e-14  Score=119.08  Aligned_cols=200  Identities=18%  Similarity=0.133  Sum_probs=135.8

Q ss_pred             CCc--chhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHh--------cCCCE
Q 020334           12 GGT--GFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAI--------AGCAG   81 (327)
Q Consensus        12 Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--------~~~d~   81 (327)
                      |++  +.||.++++.|+++|++|++.+|+.......+..+...    ...+.+.+|+++++++.+++        .++|+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~   76 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKE----YGAEVIQCDLSDEESVEALFDEAVERFGGRIDI   76 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHH----TTSEEEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH----cCCceEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence            566  99999999999999999999999333222334444332    12446999999999887764        35799


Q ss_pred             EEEccCCCCC----C------CCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           82 VIHVAAPIDI----D------GKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        82 vih~a~~~~~----~------~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                      +||+++....    .      .+.+ ...++.|+.+...+++++.+.- +..++|++||......               
T Consensus        77 lV~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~---------------  140 (241)
T PF13561_consen   77 LVNNAGISPPSNVEKPLLDLSEEDW-DKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRP---------------  140 (241)
T ss_dssp             EEEEEESCTGGGTSSSGGGSHHHHH-HHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSB---------------
T ss_pred             EEecccccccccCCCChHhCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhccc---------------
Confidence            9999976542    1      1233 3778999999888888775431 1368999998753310               


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHH----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEE----HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                             .+....|+.+|...+.+++.++.+    +||++..|.||.+..+.... .. ....+..... ...++.    
T Consensus       141 -------~~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~-~~-~~~~~~~~~~-~~~pl~----  206 (241)
T PF13561_consen  141 -------MPGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTER-IP-GNEEFLEELK-KRIPLG----  206 (241)
T ss_dssp             -------STTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHH-HH-THHHHHHHHH-HHSTTS----
T ss_pred             -------CccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhc-cc-cccchhhhhh-hhhccC----
Confidence                   122447999999999999888765    47999999999888763111 00 0111111111 112222    


Q ss_pred             CCeeeHHHHHHHHHHhhcCC
Q 020334          227 ISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~  246 (327)
                       .+..++|+|+++++++...
T Consensus       207 -r~~~~~evA~~v~fL~s~~  225 (241)
T PF13561_consen  207 -RLGTPEEVANAVLFLASDA  225 (241)
T ss_dssp             -SHBEHHHHHHHHHHHHSGG
T ss_pred             -CCcCHHHHHHHHHHHhCcc
Confidence             5779999999999999865

...

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.55  E-value=3.1e-13  Score=104.99  Aligned_cols=168  Identities=19%  Similarity=0.203  Sum_probs=121.4

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |+..+.+||||||+..||.+|++.+.+.|.+|++..| +.   ..+.+....   -+.+....+|+.|.++.++++.   
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR-~e---~~L~e~~~~---~p~~~t~v~Dv~d~~~~~~lvewLk   73 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGR-NE---ERLAEAKAE---NPEIHTEVCDVADRDSRRELVEWLK   73 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecC-cH---HHHHHHHhc---CcchheeeecccchhhHHHHHHHHH
Confidence            6666789999999999999999999999999999999 33   333333221   2577888999999886665543   


Q ss_pred             ----CCCEEEEccCCCC---CC-CC---chHHHHHHHHHhHHHHHHHHHHhcC---CccEEEEeccceeeeecCCCCCcc
Q 020334           78 ----GCAGVIHVAAPID---ID-GK---ETEEVMTQRAVNGTIGILKSCLKSG---TVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ----~~d~vih~a~~~~---~~-~~---~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                          ..+++|||||+..   +. .+   +...+..++|+.++.+|...+..+-   +-..+|.+||.-.+-  +.     
T Consensus        74 k~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafv--Pm-----  146 (245)
T COG3967          74 KEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFV--PM-----  146 (245)
T ss_pred             hhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccC--cc-----
Confidence                5799999999754   11 11   1113567889999888877666541   256899999976653  11     


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecC
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGP  197 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~  197 (327)
                                     ...-.|..+|+..-.+-..+..+   .+++++=+-|+.|-.+
T Consensus       147 ---------------~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         147 ---------------ASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             ---------------cccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence                           11225999999887766665543   3788888899988875

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.54  E-value=5.3e-13  Score=112.84  Aligned_cols=171  Identities=20%  Similarity=0.203  Sum_probs=121.1

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC-cchhhhhhCCCCCC-CCeEEEeCCCCC-hhHHHHHhc
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH-KKDLSFLTNLPGAS-ERLQIFNADLND-PESFDAAIA   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~-~~~~~~~~D~~d-~~~~~~~~~   77 (327)
                      |..++++||||||++.||.++++.|+++|+.|+++.|..... .........  ... ..+.+...|+++ .+++..+++
T Consensus         1 ~~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~~~~   78 (251)
T COG1028           1 MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK--EAGGGRAAAVAADVSDDEESVEALVA   78 (251)
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHHHHH
Confidence            445678999999999999999999999999998888844331 222222111  011 257778899998 877766554


Q ss_pred             -------CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 -------GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 -------~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                             ++|++||+||....       ..+.+ ...+++|+.+...+.+.+...-..+++|++||.... ..       
T Consensus        79 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~-~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~-------  149 (251)
T COG1028          79 AAEEEFGRIDILVNNAGIAGPDAPLEELTEEDW-DRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GG-------  149 (251)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCChhhCCHHHH-HHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CC-------
Confidence                   48999999986421       12233 488999999988888755443211299999997643 11       


Q ss_pred             cCCCCCChhHhhhcCCC-chhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecC
Q 020334          144 DETFWSDEDYIRKLDIW-GKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGP  197 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~-~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~  197 (327)
                                     .+ ...|+.||...+.+.+.++.+   .|++++.+.||.+-.+
T Consensus       150 ---------------~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~  192 (251)
T COG1028         150 ---------------PPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTP  192 (251)
T ss_pred             ---------------CCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCc
Confidence                           22 257999999999888888754   4899999999955544

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.51  E-value=2.7e-13  Score=108.42  Aligned_cols=160  Identities=22%  Similarity=0.253  Sum_probs=111.3

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCc---chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHK---KDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      ++|||||+|.||..+++.|++++ .+|+.+.|+.....   ..+..+...   ..++.++.+|++|++++.+++.     
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~---g~~v~~~~~Dv~d~~~v~~~~~~~~~~   78 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA---GARVEYVQCDVTDPEAVAAALAQLRQR   78 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT---T-EEEEEE--TTSHHHHHHHHHTSHTT
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC---CCceeeeccCccCHHHHHHHHHHHHhc
Confidence            68999999999999999999997 47999999522222   233333332   4578999999999999998875     


Q ss_pred             --CCCEEEEccCCCCC-----CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           78 --GCAGVIHVAAPIDI-----DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        78 --~~d~vih~a~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                        .++.|||+|+....     ...+.....+...+.++.+|.+++.... .+.||.+||..... +              
T Consensus        79 ~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis~~~-G--------------  142 (181)
T PF08659_consen   79 FGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFILFSSISSLL-G--------------  142 (181)
T ss_dssp             SS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHHHHT-T--------------
T ss_pred             cCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChhHhc-c--------------
Confidence              35899999987541     1122233667888999999999998866 88999999987542 1              


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCc
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSF  193 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~  193 (327)
                             .+....|+.+-...+.++..... .+.+++.+..+.
T Consensus       143 -------~~gq~~YaaAN~~lda~a~~~~~-~g~~~~sI~wg~  177 (181)
T PF08659_consen  143 -------GPGQSAYAAANAFLDALARQRRS-RGLPAVSINWGA  177 (181)
T ss_dssp             --------TTBHHHHHHHHHHHHHHHHHHH-TTSEEEEEEE-E
T ss_pred             -------CcchHhHHHHHHHHHHHHHHHHh-CCCCEEEEEccc
Confidence                   13356799999999988876544 689988887664

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.51  E-value=1.5e-13  Score=103.88  Aligned_cols=163  Identities=15%  Similarity=0.129  Sum_probs=121.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      +|+.+|.||||-.|+.|++++++.+  .+|+++.|+.+.....          ...+.....|....+++...++++|+.
T Consensus        18 ~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at----------~k~v~q~~vDf~Kl~~~a~~~qg~dV~   87 (238)
T KOG4039|consen   18 NMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT----------DKVVAQVEVDFSKLSQLATNEQGPDVL   87 (238)
T ss_pred             ccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc----------cceeeeEEechHHHHHHHhhhcCCceE
Confidence            6789999999999999999999987  4799999954322211          246677778888888888888899999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      +.|-|.+..... .+ .++.+.-+-...+++++++.| +++|+.+||.++-                        +....
T Consensus        88 FcaLgTTRgkaG-ad-gfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GAd------------------------~sSrF  140 (238)
T KOG4039|consen   88 FCALGTTRGKAG-AD-GFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGAD------------------------PSSRF  140 (238)
T ss_pred             EEeecccccccc-cC-ceEeechHHHHHHHHHHHhCC-CeEEEEEeccCCC------------------------cccce
Confidence            988876542211 22 555666667888999999998 9999999996532                        12234


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchH
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSV  207 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~  207 (327)
                      .|-..|...|.-+..+.   --+++|+|||.+.|.........+.
T Consensus       141 lY~k~KGEvE~~v~eL~---F~~~~i~RPG~ll~~R~esr~gefl  182 (238)
T KOG4039|consen  141 LYMKMKGEVERDVIELD---FKHIIILRPGPLLGERTESRQGEFL  182 (238)
T ss_pred             eeeeccchhhhhhhhcc---ccEEEEecCcceecccccccccchh
Confidence            69999999998876542   1368999999999987665444443

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.50  E-value=4.8e-13  Score=105.59  Aligned_cols=206  Identities=21%  Similarity=0.233  Sum_probs=145.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      .+.++.|+.||.|+++++...+.+++|-.+.|+..  ...++..      ...+.++.+|.....-+...+.++..++-|
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~--k~~l~sw------~~~vswh~gnsfssn~~k~~l~g~t~v~e~  124 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENEN--KQTLSSW------PTYVSWHRGNSFSSNPNKLKLSGPTFVYEM  124 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccC--cchhhCC------CcccchhhccccccCcchhhhcCCcccHHH
Confidence            35789999999999999999999999999999432  1111111      256788888887666566667788888888


Q ss_pred             cCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhH
Q 020334           86 AAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYV  165 (327)
Q Consensus        86 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~  165 (327)
                      ++-++    +. ..+..+|-....+..+++.+.+ +++|+|+|-.. |+..     +               -. ...|-
T Consensus       125 ~ggfg----n~-~~m~~ing~ani~a~kaa~~~g-v~~fvyISa~d-~~~~-----~---------------~i-~rGY~  176 (283)
T KOG4288|consen  125 MGGFG----NI-ILMDRINGTANINAVKAAAKAG-VPRFVYISAHD-FGLP-----P---------------LI-PRGYI  176 (283)
T ss_pred             hcCcc----ch-HHHHHhccHhhHHHHHHHHHcC-CceEEEEEhhh-cCCC-----C---------------cc-chhhh
Confidence            87544    22 2777888888899999999999 99999999643 4211     0               12 23699


Q ss_pred             hhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchH-------HHHHHHHhCCc-cccccccC--CCeeeHHHH
Q 020334          166 LTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSV-------RSTLAMVLGNR-EEYSILLN--ISMVHIDDV  235 (327)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~-------~~~~~~~~~~~-~~~~~~~~--~~~i~v~D~  235 (327)
                      .+|+.+|..+.+.   ++.+-+++|||.+||.+.-......+       ......+. ++ ..++..+.  .+.+.++++
T Consensus       177 ~gKR~AE~Ell~~---~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~-k~~~kLp~lg~l~~ppvnve~V  252 (283)
T KOG4288|consen  177 EGKREAEAELLKK---FRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFAL-KPLNKLPLLGPLLAPPVNVESV  252 (283)
T ss_pred             ccchHHHHHHHHh---cCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhh-chhhcCcccccccCCCcCHHHH
Confidence            9999999988763   56899999999999985332221111       11111111 11 12333333  689999999


Q ss_pred             HHHHHHhhcCCCCCce
Q 020334          236 ARAHIFLLEYPDAKGR  251 (327)
Q Consensus       236 a~~~~~~~~~~~~~~~  251 (327)
                      |.+.+.+++++...|+
T Consensus       253 A~aal~ai~dp~f~Gv  268 (283)
T KOG4288|consen  253 ALAALKAIEDPDFKGV  268 (283)
T ss_pred             HHHHHHhccCCCcCce
Confidence            9999999999876554

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.49  E-value=1.6e-12  Score=108.07  Aligned_cols=164  Identities=23%  Similarity=0.203  Sum_probs=122.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      .|-|||||+-...|..|+++|.++|+.|++... .++..+.+....+    .++...+..|+++++++.++.+       
T Consensus        29 ~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl-~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   29 DKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCL-TEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKKHLG  103 (322)
T ss_pred             CcEEEEecCCcHHHHHHHHHHHhcCCEEEEEee-cCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence            567999999999999999999999999999986 4444333332221    3688899999999999987664       


Q ss_pred             --CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        +.=.+|||||...      +...+.....+++|+.|+.++..++.    ++.  .|+|++||...=  . +       
T Consensus       104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--GRvVnvsS~~GR--~-~-------  171 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVVNVSSVLGR--V-A-------  171 (322)
T ss_pred             cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEEEecccccC--c-c-------
Confidence              3468999998543      22233445889999998777666544    443  699999996421  1 0       


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCC
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPF  198 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~  198 (327)
                                  .+...+|..||...|.....+.++   +|+++.++-|| +|-..
T Consensus       172 ------------~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG-~f~T~  214 (322)
T KOG1610|consen  172 ------------LPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG-FFKTN  214 (322)
T ss_pred             ------------CcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC-ccccc
Confidence                        123567999999999998887765   49999999999 55443

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.47  E-value=1.2e-13  Score=104.14  Aligned_cols=208  Identities=19%  Similarity=0.183  Sum_probs=141.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---CCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---GCA   80 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d   80 (327)
                      .++.|++||+.-.||+.++++|++.|.+|+++.| .+.   .+..+.+.  ....++++.+|+.+-+.+.+++.   .+|
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR-~~a---~L~sLV~e--~p~~I~Pi~~Dls~wea~~~~l~~v~pid   79 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVAR-NEA---NLLSLVKE--TPSLIIPIVGDLSAWEALFKLLVPVFPID   79 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEec-CHH---HHHHHHhh--CCcceeeeEecccHHHHHHHhhcccCchh
Confidence            3678999999999999999999999999999999 443   33333222  12348999999999888887775   369


Q ss_pred             EEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCCCCCh
Q 020334           81 GVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDE  151 (327)
Q Consensus        81 ~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~  151 (327)
                      .++++||.....     .+......|++|+.++.++.....+    ..-...+|.+||.+..       .+++       
T Consensus        80 gLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~-------R~~~-------  145 (245)
T KOG1207|consen   80 GLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI-------RPLD-------  145 (245)
T ss_pred             hhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc-------cccC-------
Confidence            999999864311     1122225678898887776665332    2213479999997643       1221       


Q ss_pred             hHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCC
Q 020334          152 DYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNIS  228 (327)
Q Consensus       152 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (327)
                              ..+.|..+|.+.+.+.+.++-+.   .|++..+.|..|........+..--.  .+... ..+++.     .
T Consensus       146 --------nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K--~k~mL-~riPl~-----r  209 (245)
T KOG1207|consen  146 --------NHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDK--KKKML-DRIPLK-----R  209 (245)
T ss_pred             --------CceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchh--ccchh-hhCchh-----h
Confidence                    24579999999999999888776   58999999999986532221111000  00000 112222     6


Q ss_pred             eeeHHHHHHHHHHhhcCCC
Q 020334          229 MVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       229 ~i~v~D~a~~~~~~~~~~~  247 (327)
                      |..++++++++.+++....
T Consensus       210 FaEV~eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  210 FAEVDEVVNAVLFLLSDNS  228 (245)
T ss_pred             hhHHHHHHhhheeeeecCc
Confidence            8999999999999998754

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.46  E-value=1.8e-11  Score=105.46  Aligned_cols=211  Identities=9%  Similarity=-0.020  Sum_probs=125.5

Q ss_pred             CCCeEEEeCCc--chhHHHHHHHHHHCCCeEEEEEcCCC--------CCcchhhhh---hC-----------CCCCCCCe
Q 020334            4 QKGKVCVTGGT--GFIGSWLIMRLLDHGYFVTTTVRSDP--------EHKKDLSFL---TN-----------LPGASERL   59 (327)
Q Consensus         4 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~--------~~~~~~~~~---~~-----------~~~~~~~~   59 (327)
                      .+|+++||||+  ..||.++++.|+++|++|++.+| .+        .........   ..           ........
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~   85 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW-VPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTP   85 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec-cchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCC
Confidence            46889999995  89999999999999999998765 21        000000000   00           00000011


Q ss_pred             EEEeCCCCC--------hhHHHHHh-------cCCCEEEEccCCCC--------CCCCchHHHHHHHHHhHHHHHHHHHH
Q 020334           60 QIFNADLND--------PESFDAAI-------AGCAGVIHVAAPID--------IDGKETEEVMTQRAVNGTIGILKSCL  116 (327)
Q Consensus        60 ~~~~~D~~d--------~~~~~~~~-------~~~d~vih~a~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~  116 (327)
                      +-+..|+.+        .+++++++       .++|++||+||...        .+.+++. ..+++|+.++..+++++.
T Consensus        86 ~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~-~~~~vNl~g~~~l~~a~~  164 (299)
T PRK06300         86 EDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYL-AALSTSSYSFVSLLSHFG  164 (299)
T ss_pred             EEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHH
Confidence            222222222        11233333       25899999997431        1123344 778999999988888776


Q ss_pred             hcC-CccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc-hhhHhhhHHHHHHHHHHHHHc----CCcEEEEe
Q 020334          117 KSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG-KSYVLTKTLTERAALEFAEEH----GLDLVTLI  190 (327)
Q Consensus       117 ~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~R  190 (327)
                      +.= ...++|++||..... .                     .+.. ..|+.+|...+.+.+.++.++    |++++.+.
T Consensus       165 p~m~~~G~ii~iss~~~~~-~---------------------~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~  222 (299)
T PRK06300        165 PIMNPGGSTISLTYLASMR-A---------------------VPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTIS  222 (299)
T ss_pred             HHhhcCCeEEEEeehhhcC-c---------------------CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEE
Confidence            531 125789998855431 0                     0111 269999999999999888653    79999999


Q ss_pred             cCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          191 PSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       191 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      ||.+-.+.... ... ........... .+..     .+...+|+++++++++...
T Consensus       223 PG~v~T~~~~~-~~~-~~~~~~~~~~~-~p~~-----r~~~peevA~~v~~L~s~~  270 (299)
T PRK06300        223 AGPLASRAGKA-IGF-IERMVDYYQDW-APLP-----EPMEAEQVGAAAAFLVSPL  270 (299)
T ss_pred             eCCccChhhhc-ccc-cHHHHHHHHhc-CCCC-----CCcCHHHHHHHHHHHhCcc
Confidence            99987764211 000 01111111111 1111     4668999999999998753

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.45  E-value=2.1e-12  Score=136.19  Aligned_cols=170  Identities=18%  Similarity=0.201  Sum_probs=126.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCC-CC----c-----c-----------------------------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDP-EH----K-----K-----------------------------   44 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~-~~----~-----~-----------------------------   44 (327)
                      ++++|||||+|.||..++++|+++ |++|++++|+.. ..    .     .                             
T Consensus      1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~ 2076 (2582)
T TIGR02813      1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPV 2076 (2582)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccccc
Confidence            578999999999999999999988 699999999511 00    0     0                             


Q ss_pred             ----hh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------CCCEEEEccCCCCC------CCCchHHHHHHHHHhH
Q 020334           45 ----DL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------GCAGVIHVAAPIDI------DGKETEEVMTQRAVNG  107 (327)
Q Consensus        45 ----~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~  107 (327)
                          .. ..+......+..+.++.+|++|.+++.+++.      ++|+|||+||....      ..+++. ..+++|+.|
T Consensus      2077 ~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~-~v~~~nv~G 2155 (2582)
T TIGR02813      2077 LSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFN-AVYGTKVDG 2155 (2582)
T ss_pred             chhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHH-HHHHHHHHH
Confidence                00 0011111123468899999999998887664      48999999996441      223344 789999999


Q ss_pred             HHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc-CCcE
Q 020334          108 TIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH-GLDL  186 (327)
Q Consensus       108 ~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~  186 (327)
                      +.++++++.... .++||++||...+...                      .....|+.+|...+.+.+.++.++ ++++
T Consensus      2156 ~~~Ll~al~~~~-~~~IV~~SSvag~~G~----------------------~gqs~YaaAkaaL~~la~~la~~~~~irV 2212 (2582)
T TIGR02813      2156 LLSLLAALNAEN-IKLLALFSSAAGFYGN----------------------TGQSDYAMSNDILNKAALQLKALNPSAKV 2212 (2582)
T ss_pred             HHHHHHHHHHhC-CCeEEEEechhhcCCC----------------------CCcHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence            999999998765 6789999997654311                      224569999999998888887765 6899


Q ss_pred             EEEecCceecCC
Q 020334          187 VTLIPSFVVGPF  198 (327)
Q Consensus       187 ~i~R~~~v~G~~  198 (327)
                      +.+.||.+-|+.
T Consensus      2213 ~sI~wG~wdtgm 2224 (2582)
T TIGR02813      2213 MSFNWGPWDGGM 2224 (2582)
T ss_pred             EEEECCeecCCc
Confidence            999999876653

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.43  E-value=8.3e-12  Score=109.01  Aligned_cols=224  Identities=20%  Similarity=0.147  Sum_probs=135.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHH-Hhc----CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDA-AIA----GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~----~~   79 (327)
                      +++|||+||||.+|+-+++.|+++|+.|.++.|+.....+.+.    ......+.+.+..|...+.+... +..    ..
T Consensus        79 ~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~----~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~  154 (411)
T KOG1203|consen   79 PTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG----VFFVDLGLQNVEADVVTAIDILKKLVEAVPKGV  154 (411)
T ss_pred             CCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc----ccccccccceeeeccccccchhhhhhhhccccc
Confidence            4689999999999999999999999999999994433333322    11123455666666665444332 222    23


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      .+++-|++...... +.. --..+.-.++++++++|+..+ ++|++++||...-   ...                   .
T Consensus       155 ~~v~~~~ggrp~~e-d~~-~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~~---~~~-------------------~  209 (411)
T KOG1203|consen  155 VIVIKGAGGRPEEE-DIV-TPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGGT---KFN-------------------Q  209 (411)
T ss_pred             eeEEecccCCCCcc-cCC-CcceecHHHHHHHHHHHHHhC-CceEEEEEeecCc---ccC-------------------C
Confidence            46666666433221 000 123455779999999999999 9999999885432   111                   1


Q ss_pred             Cchh------hHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHH
Q 020334          160 WGKS------YVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHID  233 (327)
Q Consensus       160 ~~~~------Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  233 (327)
                      +.+.      +-..|+.+|+++.    +.|++++|+|++...-...... ...+       ...+..+...+.--.+.-.
T Consensus       210 ~~~~~~~~~~~~~~k~~~e~~~~----~Sgl~ytiIR~g~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~i~r~  277 (411)
T KOG1203|consen  210 PPNILLLNGLVLKAKLKAEKFLQ----DSGLPYTIIRPGGLEQDTGGQR-EVVV-------DDEKELLTVDGGAYSISRL  277 (411)
T ss_pred             CchhhhhhhhhhHHHHhHHHHHH----hcCCCcEEEeccccccCCCCcc-eecc-------cCccccccccccceeeehh
Confidence            1222      3467777777765    5799999999997765432210 0000       0111111111111267888


Q ss_pred             HHHHHHHHhhcCCCCCc-eE--EEe---ccccCHHHHHHHHH
Q 020334          234 DVARAHIFLLEYPDAKG-RY--ICS---SAKLTIQEMAEFLS  269 (327)
Q Consensus       234 D~a~~~~~~~~~~~~~~-~y--~~~---~~~~s~~e~~~~i~  269 (327)
                      |+|+..+.++.+..... .+  ++.   +....+.++.+.+.
T Consensus       278 ~vael~~~all~~~~~~~k~~~~v~~~~gpg~~~~~l~~~~~  319 (411)
T KOG1203|consen  278 DVAELVAKALLNEAATFKKVVELVLKPEGPGRPYKVLLELFP  319 (411)
T ss_pred             hHHHHHHHHHhhhhhccceeEEeecCCCCCCccHHHHHhhcc
Confidence            99999999988766544 33  332   22345555555543

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.41  E-value=1.3e-11  Score=102.54  Aligned_cols=209  Identities=17%  Similarity=0.154  Sum_probs=139.0

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------C
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------G   78 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   78 (327)
                      .+|+||||+..||..++..+..+|+.|+++.| +..+........+.......+.+..+|+.|-+++...++       .
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar-~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITAR-SGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEec-cHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence            47999999999999999999999999999999 443333222221111111236789999999888877665       3


Q ss_pred             CCEEEEccCCCC---CC--CCchHHHHHHHHHhHHHHHHHHHHhcC----CccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           79 CAGVIHVAAPID---ID--GKETEEVMTQRAVNGTIGILKSCLKSG----TVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        79 ~d~vih~a~~~~---~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~----~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                      +|.+|||||..-   +.  .....+...++|..++.+++.++...-    ...+|+.+||...-. +             
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~-~-------------  178 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML-G-------------  178 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc-C-------------
Confidence            699999998643   11  112224678899999998888765431    123889998875421 0             


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                              -...+.|+.+|.....+.....++   +++.++..-|+.+-.|+-... ....+...+.+.         +.
T Consensus       179 --------i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E-n~tkP~~t~ii~---------g~  240 (331)
T KOG1210|consen  179 --------IYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERE-NKTKPEETKIIE---------GG  240 (331)
T ss_pred             --------cccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccc-cccCchheeeec---------CC
Confidence                    122456888888776666655544   489999999999988863321 111111111111         22


Q ss_pred             CCeeeHHHHHHHHHHhhcCCC
Q 020334          227 ISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~~  247 (327)
                      .+-+-.+++|.+++.-+.++.
T Consensus       241 ss~~~~e~~a~~~~~~~~rg~  261 (331)
T KOG1210|consen  241 SSVIKCEEMAKAIVKGMKRGN  261 (331)
T ss_pred             CCCcCHHHHHHHHHhHHhhcC
Confidence            366889999999998877653

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.40  E-value=4.6e-12  Score=98.99  Aligned_cols=166  Identities=21%  Similarity=0.177  Sum_probs=121.4

Q ss_pred             CCeEEEeCC-cchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGG-TGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .++|||||+ +|.||.+|++.+.++|+.|.+..| .-+....+..       ..++...+.|+++++.+.+...      
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR-~~e~M~~L~~-------~~gl~~~kLDV~~~~~V~~v~~evr~~~   78 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATAR-RLEPMAQLAI-------QFGLKPYKLDVSKPEEVVTVSGEVRANP   78 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEcc-ccchHhhHHH-------hhCCeeEEeccCChHHHHHHHHHHhhCC
Confidence            578998875 699999999999999999999999 4444443332       1468999999999998876543      


Q ss_pred             --CCCEEEEccCCCC-C----CCCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 --GCAGVIHVAAPID-I----DGKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 --~~d~vih~a~~~~-~----~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                        +.|.++|+||..- .    ..-..-++++++|+-|..+..++....  .....+|+++|..+|...            
T Consensus        79 ~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpf------------  146 (289)
T KOG1209|consen   79 DGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPF------------  146 (289)
T ss_pred             CCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEecc------------
Confidence              4699999997421 1    111233488999999987777766532  113689999999888422            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCC
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~  200 (327)
                                +..+.|..||++.-.+.+.+.-+   +|++++.+-+|.|-..-.+
T Consensus       147 ----------pf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~  191 (289)
T KOG1209|consen  147 ----------PFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIAD  191 (289)
T ss_pred             ----------chhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceeccccc
Confidence                      44678999999887777766533   3888888888887765433

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.34  E-value=1.7e-11  Score=105.60  Aligned_cols=178  Identities=18%  Similarity=0.038  Sum_probs=122.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      .|+||+|+|++|.||+.++..|+.++  .++..+++ ........ .+.+.   ..  .....+.+|+.++.+.++++|+
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di-~~~~g~a~-Dl~~~---~~--~~~v~~~td~~~~~~~l~gaDv   79 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDI-VGAPGVAA-DLSHI---DT--PAKVTGYADGELWEKALRGADL   79 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEec-CCCccccc-chhhc---Cc--CceEEEecCCCchHHHhCCCCE
Confidence            36799999999999999999998654  68999998 32221111 11111   11  2233455565555678889999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      ||++||........+. +.+..|+..++++++++++++ ++++|+++|.-+-....-....+.+.+.         .+|.
T Consensus        80 VVitaG~~~~~~~tR~-dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPvdv~~~~~~~~~~~~sg---------~p~~  148 (321)
T PTZ00325         80 VLICAGVPRKPGMTRD-DLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPVNSTVPIAAETLKKAGV---------YDPR  148 (321)
T ss_pred             EEECCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHhhhhhccC---------CChh
Confidence            9999997554444555 889999999999999999998 8999999997553211000000111111         2456


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                      ..||.+-+..-++-...+++.++....++ +.|+|....
T Consensus       149 ~viG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        149 KLFGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             heeechhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence            67888866666777777788899888888 779998654

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.33  E-value=3.7e-12  Score=96.12  Aligned_cols=208  Identities=19%  Similarity=0.205  Sum_probs=140.1

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------C
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------G   78 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   78 (327)
                      -..|||||...+|.+-++.|+++|..|..++..++.-....+++      ..++.|...|+++.+++..++.       +
T Consensus        10 lvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel------g~~~vf~padvtsekdv~aala~ak~kfgr   83 (260)
T KOG1199|consen   10 LVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL------GGKVVFTPADVTSEKDVRAALAKAKAKFGR   83 (260)
T ss_pred             eeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh------CCceEEeccccCcHHHHHHHHHHHHhhccc
Confidence            35789999999999999999999999999998544444444443      3678999999999998887664       5


Q ss_pred             CCEEEEccCCCC----CC-------CCchHHHHHHHHHhHHHHHHHHHH----hc-----CCccEEEEeccceeeeecCC
Q 020334           79 CAGVIHVAAPID----ID-------GKETEEVMTQRAVNGTIGILKSCL----KS-----GTVKRFVYTSSGSTVYFSGK  138 (327)
Q Consensus        79 ~d~vih~a~~~~----~~-------~~~~~~~~~~~nv~~~~~l~~~~~----~~-----~~~~~~v~~SS~~v~~~~~~  138 (327)
                      .|..++|||...    ++       .-+..+..+++|+.|+.|+++.-.    ++     ++-.-+|.+-|.+.|. +  
T Consensus        84 ld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd-g--  160 (260)
T KOG1199|consen   84 LDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD-G--  160 (260)
T ss_pred             eeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec-C--
Confidence            799999998632    11       112223667889999999887543    11     2234566666766663 1  


Q ss_pred             CCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHH----HHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHH
Q 020334          139 DVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTER----AALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV  214 (327)
Q Consensus       139 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~----~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~  214 (327)
                                         +.....|+.||...--    +.++++. .||+++.+.|+.+-.|-... .+.-+..++.. 
T Consensus       161 -------------------q~gqaaysaskgaivgmtlpiardla~-~gir~~tiapglf~tpllss-lpekv~~fla~-  218 (260)
T KOG1199|consen  161 -------------------QTGQAAYSASKGAIVGMTLPIARDLAG-DGIRFNTIAPGLFDTPLLSS-LPEKVKSFLAQ-  218 (260)
T ss_pred             -------------------ccchhhhhcccCceEeeechhhhhccc-CceEEEeecccccCChhhhh-hhHHHHHHHHH-
Confidence                               2335579999974433    3444443 38999999999665553221 23333333332 


Q ss_pred             hCCccccccccCCCeeeHHHHHHHHHHhhcCCCCCce
Q 020334          215 LGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGR  251 (327)
Q Consensus       215 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~  251 (327)
                         .++++.    ..-|..+.+..+-.+++++..+|.
T Consensus       219 ---~ipfps----rlg~p~eyahlvqaiienp~lnge  248 (260)
T KOG1199|consen  219 ---LIPFPS----RLGHPHEYAHLVQAIIENPYLNGE  248 (260)
T ss_pred             ---hCCCch----hcCChHHHHHHHHHHHhCcccCCe
Confidence               223332    356888888888888999887763

>PRK06720 hypothetical protein; Provisional

Probab=99.25  E-value=1.3e-10  Score=91.51  Aligned_cols=126  Identities=17%  Similarity=0.135  Sum_probs=80.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .++.++||||+|.||.++++.|++.|++|++.+|+.+........+...   .....++.+|+++.+++.++++      
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~v~~~~~~~   91 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL---GGEALFVSYDMEKQGDWQRVISITLNAF   91 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999998432111111222211   2356788999999988776542      


Q ss_pred             -CCCEEEEccCCCCC----CCCchHHHHHHHHHhH----HHHHHHHHHhcC------CccEEEEeccceee
Q 020334           78 -GCAGVIHVAAPIDI----DGKETEEVMTQRAVNG----TIGILKSCLKSG------TVKRFVYTSSGSTV  133 (327)
Q Consensus        78 -~~d~vih~a~~~~~----~~~~~~~~~~~~nv~~----~~~l~~~~~~~~------~~~~~v~~SS~~v~  133 (327)
                       ++|++||+||....    ...... .....|+.+    ++.+...+++.+      +..+|..+||.++-
T Consensus        92 G~iDilVnnAG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         92 SRIDMLFQNAGLYKIDSIFSRQQEN-DSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             CCCCEEEECCCcCCCCCcccccchh-HhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence             58999999986441    111111 122334443    333333333222      25688888887653

>PLN00106 malate dehydrogenase

Probab=99.23  E-value=8.8e-11  Score=101.37  Aligned_cols=175  Identities=17%  Similarity=0.027  Sum_probs=119.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ..||+|||++|.||++++..|+.++  .++..+++ ++ .......+.+.   ...  ....++.+.+++.+.++++|+|
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di-~~-~~g~a~Dl~~~---~~~--~~i~~~~~~~d~~~~l~~aDiV   90 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDI-AN-TPGVAADVSHI---NTP--AQVRGFLGDDQLGDALKGADLV   90 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEec-CC-CCeeEchhhhC---CcC--ceEEEEeCCCCHHHHcCCCCEE
Confidence            4689999999999999999999765  48999998 43 21111122111   111  1223433444577789999999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      ||+||........+. +.+..|...++++++.+++++ ...+++++|--+=+..+.-...+...+.         .+|..
T Consensus        91 VitAG~~~~~g~~R~-dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~t~~~~~~s~---------~p~~~  159 (323)
T PLN00106         91 IIPAGVPRKPGMTRD-DLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPIAAEVLKKAGV---------YDPKK  159 (323)
T ss_pred             EEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHHHHHHHHHcCC---------CCcce
Confidence            999997654444555 889999999999999999998 7778888773321000000000111111         24567


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCC
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPF  198 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~  198 (327)
                      .||.+++..+++-..++++.+++..-++- .|+|..
T Consensus       160 viG~~~LDs~Rl~~~lA~~lgv~~~~V~~-~ViGeH  194 (323)
T PLN00106        160 LFGVTTLDVVRANTFVAEKKGLDPADVDV-PVVGGH  194 (323)
T ss_pred             EEEEecchHHHHHHHHHHHhCCChhheEE-EEEEeC
Confidence            89999999999999999999998888854 477765

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.20  E-value=1.9e-10  Score=91.10  Aligned_cols=210  Identities=14%  Similarity=0.087  Sum_probs=132.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      .+-|||||+|..||..++..+.+.+-+.....+..+...  .+.+.-..  ........+|++....+.++++       
T Consensus         6 r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~--gd~~v~~~g~~~e~~~l~al~e~~r~k~g   81 (253)
T KOG1204|consen    6 RKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAY--GDDFVHVVGDITEEQLLGALREAPRKKGG   81 (253)
T ss_pred             ceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEe--cCCcceechHHHHHHHHHHHHhhhhhcCC
Confidence            456889999999999999999887765433333111111  11111000  1223445566666554444443       


Q ss_pred             CCCEEEEccCCCC--------C-CCCchHHHHHHHHHhHHHHHHHHHHhcC--C--ccEEEEeccceeeeecCCCCCccc
Q 020334           78 GCAGVIHVAAPID--------I-DGKETEEVMTQRAVNGTIGILKSCLKSG--T--VKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 ~~d~vih~a~~~~--------~-~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~--~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                      +-|+|||+||...        . +...|. .+++.|+.+...|...+.+.-  +  .+-+|++||.+..-       |+ 
T Consensus        82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~-ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~-------p~-  152 (253)
T KOG1204|consen   82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWK-KYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR-------PF-  152 (253)
T ss_pred             ceeEEEecCCCccchhhccCCcccHHHHH-HHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc-------cc-
Confidence            4699999998654        1 123444 899999999888877666532  1  37899999987652       11 


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCC-----CCCCchHHHHHHHHhCC
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFIC-----PKFAGSVRSTLAMVLGN  217 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~-----~~~~~~~~~~~~~~~~~  217 (327)
                                    +.-..|+.+|++-+.+...++.+.  ++++..++||.+=.+..-     .........+.+.++..
T Consensus       153 --------------~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~  218 (253)
T KOG1204|consen  153 --------------SSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKES  218 (253)
T ss_pred             --------------cHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhc
Confidence                          112469999999999999987554  899999999987665321     11222222233333333


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCC-CCCc
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYP-DAKG  250 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~~  250 (327)
                      +         ..+...+.+..+..++++. ...|
T Consensus       219 ~---------~ll~~~~~a~~l~~L~e~~~f~sG  243 (253)
T KOG1204|consen  219 G---------QLLDPQVTAKVLAKLLEKGDFVSG  243 (253)
T ss_pred             C---------CcCChhhHHHHHHHHHHhcCcccc
Confidence            3         5778889999999998886 3344

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.14  E-value=4.9e-10  Score=93.41  Aligned_cols=170  Identities=15%  Similarity=0.097  Sum_probs=116.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhh-hhhCCCCCCCCeEEEeCCCCChhH----HHHHhcC--
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLS-FLTNLPGASERLQIFNADLNDPES----FDAAIAG--   78 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~----~~~~~~~--   78 (327)
                      .=.+|||||..||++.+++|+++|.+|..+.| +.++...+. ++.+..  .-.++++..|.+++..    +.+.+.+  
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsR-t~~KL~~v~kEI~~~~--~vev~~i~~Dft~~~~~ye~i~~~l~~~~  126 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISR-TQEKLEAVAKEIEEKY--KVEVRIIAIDFTKGDEVYEKLLEKLAGLD  126 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHHHh--CcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence            34789999999999999999999999999999 554444332 222211  1357889999987664    4444444  


Q ss_pred             CCEEEEccCCCCCCCC-------chHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           79 CAGVIHVAAPIDIDGK-------ETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        79 ~d~vih~a~~~~~~~~-------~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      +.++|||+|......+       ...+....+|+.++..+.+...    +.+ ..-+|++||.+..-       +     
T Consensus       127 VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~~-------p-----  193 (312)
T KOG1014|consen  127 VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGLI-------P-----  193 (312)
T ss_pred             eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEeccccccc-------c-----
Confidence            5689999997552211       1223556667777665555443    333 56899999976431       0     


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCC
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICP  201 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~  201 (327)
                                .+-.+.|+.+|...+.....+.+++   |+.+-.+-|..|-++....
T Consensus       194 ----------~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~  240 (312)
T KOG1014|consen  194 ----------TPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKY  240 (312)
T ss_pred             ----------ChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccccc
Confidence                      1224579999998888877777664   8999999999998876443

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.11  E-value=6.6e-10  Score=87.97  Aligned_cols=102  Identities=16%  Similarity=0.215  Sum_probs=74.2

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------C
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------G   78 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   78 (327)
                      |+++|||||||+|. +++.|+++|++|++++| ++.....+...  .+ ....+.++.+|+.|++++.++++       .
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R-~~~~~~~l~~~--l~-~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~   75 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIAR-REVKLENVKRE--ST-TPESITPLPLDYHDDDALKLAIKSTIEKNGP   75 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEEC-CHHHHHHHHHH--hh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46999999998876 99999999999999999 43332222110  11 12467889999999998887765       3


Q ss_pred             CCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCcc----EEEEeccc
Q 020334           79 CAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVK----RFVYTSSG  130 (327)
Q Consensus        79 ~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~----~~v~~SS~  130 (327)
                      +|.+|+.+-                 +.++.++..+|++.+ ++    +|+|+=.+
T Consensus        76 id~lv~~vh-----------------~~~~~~~~~~~~~~g-v~~~~~~~~h~~gs  113 (177)
T PRK08309         76 FDLAVAWIH-----------------SSAKDALSVVCRELD-GSSETYRLFHVLGS  113 (177)
T ss_pred             CeEEEEecc-----------------ccchhhHHHHHHHHc-cCCCCceEEEEeCC
Confidence            566665543                 335788999999988 77    88887543

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=99.10  E-value=9.4e-10  Score=95.66  Aligned_cols=177  Identities=14%  Similarity=0.013  Sum_probs=107.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-------CeEEEEEcCCCCC-cch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-------YFVTTTVRSDPEH-KKD-LSFLTNLPGASERLQIFNADLNDPESFDAA   75 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~   75 (327)
                      ..+|+||||+|+||++++..|+..+       .+|.+++++.... ... ...+.+      .......|+....++.+.
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d------~~~~~~~~~~~~~~~~~~   75 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQD------CAFPLLKSVVATTDPEEA   75 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhh------ccccccCCceecCCHHHH
Confidence            3579999999999999999998844       5899999933211 111 000100      001222354445567778


Q ss_pred             hcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCCChhHh
Q 020334           76 IAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYI  154 (327)
Q Consensus        76 ~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~  154 (327)
                      ++++|+|||+||.......... +.++.|+...+.+...+.++. +...+|.+|...=.     -.....+.+..     
T Consensus        76 l~~aDiVI~tAG~~~~~~~~R~-~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~-----~t~~~~k~~~~-----  144 (325)
T cd01336          76 FKDVDVAILVGAMPRKEGMERK-DLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANT-----NALILLKYAPS-----  144 (325)
T ss_pred             hCCCCEEEEeCCcCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHH-----HHHHHHHHcCC-----
Confidence            8899999999997654444444 889999999999999999884 34456666642100     00001111100     


Q ss_pred             hhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCC
Q 020334          155 RKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICP  201 (327)
Q Consensus       155 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~  201 (327)
                         .++...=..+.+..-++-..++++.+++...++-..|+|.....
T Consensus       145 ---~~~~~ig~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~s  188 (325)
T cd01336         145 ---IPKENFTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSST  188 (325)
T ss_pred             ---CCHHHEEeeehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCCC
Confidence               01111122234455555556667778888888877788976443

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=99.00  E-value=1.7e-08  Score=87.57  Aligned_cols=171  Identities=13%  Similarity=0.058  Sum_probs=115.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-------eEEEEEcCCCC--CcchhhhhhCCC-CCCCCeEEEeCCCCChhHHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-------FVTTTVRSDPE--HKKDLSFLTNLP-GASERLQIFNADLNDPESFDA   74 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~   74 (327)
                      .+||.|+|++|.||++++..|+..|.       ++..+++....  .......+.+.. ....++++ ..  .    ..+
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~~--~----~~~   74 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-TD--D----PNV   74 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-ec--C----cHH
Confidence            46899999999999999999998764       78888883221  111111222111 00012222 11  1    234


Q ss_pred             HhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCC-ccEEEEeccce---eeeecCCCCCcccCCCCCC
Q 020334           75 AIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT-VKRFVYTSSGS---TVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        75 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~~v~~SS~~---v~~~~~~~~~~~~E~~~~~  150 (327)
                      .++++|+||.+||.......+.. +.+..|+...+.+.+.+.++.+ ...+|.+|...   +|.       ......   
T Consensus        75 ~~~daDivvitaG~~~k~g~tR~-dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~-------~~k~sg---  143 (322)
T cd01338          75 AFKDADWALLVGAKPRGPGMERA-DLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALI-------AMKNAP---  143 (322)
T ss_pred             HhCCCCEEEEeCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHH-------HHHHcC---
Confidence            57789999999997554444444 8899999999999999999873 55677666421   010       001110   


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCC
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFI  199 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~  199 (327)
                            .-++...||.+++..+++...+++.++++...+|..+|||+..
T Consensus       144 ------~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         144 ------DIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             ------CCChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence                  0134568999999999999999999999999999999999974

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.95  E-value=4.5e-09  Score=91.96  Aligned_cols=98  Identities=31%  Similarity=0.408  Sum_probs=76.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ||+|||+|| |+||+.++..|+++| .+|++.+| ++++..++....     .++++.++.|+.|.+++.+++++.|+||
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdR-s~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~~~d~VI   73 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADR-SKEKCARIAELI-----GGKVEALQVDAADVDALVALIKDFDLVI   73 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeC-CHHHHHHHHhhc-----cccceeEEecccChHHHHHHHhcCCEEE
Confidence            578999998 999999999999998 89999999 655554443321     2479999999999999999999999999


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      +|+.++-                 ..+++++|.+.+  .+++=+|
T Consensus        74 n~~p~~~-----------------~~~i~ka~i~~g--v~yvDts   99 (389)
T COG1748          74 NAAPPFV-----------------DLTILKACIKTG--VDYVDTS   99 (389)
T ss_pred             EeCCchh-----------------hHHHHHHHHHhC--CCEEEcc
Confidence            9997431                 236777777776  3444333

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.88  E-value=2e-08  Score=80.94  Aligned_cols=180  Identities=15%  Similarity=0.122  Sum_probs=118.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-----eEEEEEcCCCCCcchhhhhhCCCC-CCCCeEEEeCCCCChhHHHHHh--
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-----FVTTTVRSDPEHKKDLSFLTNLPG-ASERLQIFNADLNDPESFDAAI--   76 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-----~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~--   76 (327)
                      .|.+||||++..||.+++..|++...     .+...+|+.+.....+..+.+.-. ...+++++..|+++..++.++.  
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            56788999999999999999997643     367788855555555555544321 2346899999999987765543  


Q ss_pred             -----cCCCEEEEccCCCCCCC--------------------------------CchHHHHHHHHHhHHHHHHHHHHhc-
Q 020334           77 -----AGCAGVIHVAAPIDIDG--------------------------------KETEEVMTQRAVNGTIGILKSCLKS-  118 (327)
Q Consensus        77 -----~~~d~vih~a~~~~~~~--------------------------------~~~~~~~~~~nv~~~~~l~~~~~~~-  118 (327)
                           +..|.|+-+||......                                .+...+.++.||-|..-+++.+... 
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence                 46799999998654221                                2334578999999987777655532 


Q ss_pred             --CCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCc
Q 020334          119 --GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSF  193 (327)
Q Consensus       119 --~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~  193 (327)
                        +....+|.+||-..-      ...++=++.     ..  .....||..||.+.+.+-....++.   |+.--++.||.
T Consensus       163 ~~~~~~~lvwtSS~~a~------kk~lsleD~-----q~--~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~  229 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMAR------KKNLSLEDF-----QH--SKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGI  229 (341)
T ss_pred             hcCCCCeEEEEeecccc------cccCCHHHH-----hh--hcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCce
Confidence              224589999995431      122221111     00  1234579999999988766665543   56667777775


Q ss_pred             eecC
Q 020334          194 VVGP  197 (327)
Q Consensus       194 v~G~  197 (327)
                      ....
T Consensus       230 ~tt~  233 (341)
T KOG1478|consen  230 FTTN  233 (341)
T ss_pred             eecc
Confidence            5443

>PRK09620 hypothetical protein; Provisional

Probab=98.80  E-value=1.9e-08  Score=82.83  Aligned_cols=82  Identities=26%  Similarity=0.270  Sum_probs=57.2

Q ss_pred             CCeEEEeCCc----------------chhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCC
Q 020334            5 KGKVCVTGGT----------------GFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLND   68 (327)
Q Consensus         5 ~~~ilVtGat----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d   68 (327)
                      +++||||+|.                ||+|++++++|+++|++|+.+++..........   .    ...+..+.++...
T Consensus         3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~---~----~~~~~~V~s~~d~   75 (229)
T PRK09620          3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDIN---N----QLELHPFEGIIDL   75 (229)
T ss_pred             CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccC---C----ceeEEEEecHHHH
Confidence            7899999885                999999999999999999998872211111000   0    1234456664444


Q ss_pred             hhHHHHHhc--CCCEEEEccCCCCCCC
Q 020334           69 PESFDAAIA--GCAGVIHVAAPIDIDG   93 (327)
Q Consensus        69 ~~~~~~~~~--~~d~vih~a~~~~~~~   93 (327)
                      .+.+.+++.  ++|+|||+||..++..
T Consensus        76 ~~~l~~~~~~~~~D~VIH~AAvsD~~~  102 (229)
T PRK09620         76 QDKMKSIITHEKVDAVIMAAAGSDWVV  102 (229)
T ss_pred             HHHHHHHhcccCCCEEEECccccceec
Confidence            456777774  6899999999876543

>PRK05086 malate dehydrogenase; Provisional

Probab=98.78  E-value=1.4e-07  Score=81.81  Aligned_cols=172  Identities=16%  Similarity=0.058  Sum_probs=104.9

Q ss_pred             CeEEEeCCcchhHHHHHHHHHH---CCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLD---HGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      |||+|+||||.+|++++..|..   .++++.+++| ++........+.+.    +....+.+  .+.+++.+.++++|+|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~-~~~~~g~alDl~~~----~~~~~i~~--~~~~d~~~~l~~~DiV   73 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDI-APVTPGVAVDLSHI----PTAVKIKG--FSGEDPTPALEGADVV   73 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEec-CCCCcceehhhhcC----CCCceEEE--eCCCCHHHHcCCCCEE
Confidence            5799999999999999998854   2568888888 33321111111110    11122333  2233455667889999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecccee----eeecCCCCCcccCCCCCChhHhhhcC
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGST----VYFSGKDVDMLDETFWSDEDYIRKLD  158 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v----~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (327)
                      |.++|.......... +.+..|+....++++++++++ .+++|.+.|-=+    |...   .........          
T Consensus        74 IitaG~~~~~~~~R~-dll~~N~~i~~~ii~~i~~~~-~~~ivivvsNP~D~~t~~~~---~~~~~~sg~----------  138 (312)
T PRK05086         74 LISAGVARKPGMDRS-DLFNVNAGIVKNLVEKVAKTC-PKACIGIITNPVNTTVAIAA---EVLKKAGVY----------  138 (312)
T ss_pred             EEcCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCchHHHHHHHH---HHHHHhcCC----------
Confidence            999997654444444 889999999999999999998 777777766321    1000   000011100          


Q ss_pred             CCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          159 IWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       159 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                      ++....|..-...-++....++..+++..-++ +.|+|...+
T Consensus       139 p~~rvig~~~Lds~R~~~~ia~~l~~~~~~v~-~~v~GeHg~  179 (312)
T PRK05086        139 DKNKLFGVTTLDVIRSETFVAELKGKQPGEVE-VPVIGGHSG  179 (312)
T ss_pred             CHHHEEeeecHHHHHHHHHHHHHhCCChhheE-EEEEEecCC
Confidence            11223444434444555566677788888887 778998633

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.73  E-value=1.8e-06  Score=75.58  Aligned_cols=82  Identities=18%  Similarity=0.088  Sum_probs=58.8

Q ss_pred             CCeEEEeCCcchhHHH--HHHHHHHCCCeEEEEEcCCCCCcc-----------hhhhhhCCCCCCCCeEEEeCCCCChhH
Q 020334            5 KGKVCVTGGTGFIGSW--LIMRLLDHGYFVTTTVRSDPEHKK-----------DLSFLTNLPGASERLQIFNADLNDPES   71 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~D~~d~~~   71 (327)
                      +|++|||||++.+|.+  +++.| +.|++|+++++.......           .+......  ....+..+.+|+++++.
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~--~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKA--AGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHh--cCCceEEEEcCCCCHHH
Confidence            4799999999999999  89999 999999888862211111           11211111  12346778999999988


Q ss_pred             HHHHhc-------CCCEEEEccCCC
Q 020334           72 FDAAIA-------GCAGVIHVAAPI   89 (327)
Q Consensus        72 ~~~~~~-------~~d~vih~a~~~   89 (327)
                      +.++++       ++|++||++|..
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccC
Confidence            776654       589999999865

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.71  E-value=2.4e-07  Score=80.57  Aligned_cols=163  Identities=17%  Similarity=0.063  Sum_probs=102.7

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCC-------eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChh---------
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGY-------FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPE---------   70 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---------   70 (327)
                      +|.|+||+|.+|++++..|...+.       ++..+++.....               ..+-...|+.|..         
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~---------------~a~g~~~Dl~d~~~~~~~~~~~   65 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK---------------VLEGVVMELMDCAFPLLDGVVP   65 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc---------------ccceeEeehhcccchhcCceec
Confidence            589999999999999999987542       588888832211               0112223333322         


Q ss_pred             --HHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccce---eeeecCCCCCccc
Q 020334           71 --SFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGS---TVYFSGKDVDMLD  144 (327)
Q Consensus        71 --~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~---v~~~~~~~~~~~~  144 (327)
                        ...+.+.++|+|||+||.......+.. +.+..|+...+.+.+.+.++. +...+|.+|...   +|.        .-
T Consensus        66 ~~~~~~~~~~aDiVVitAG~~~~~~~tr~-~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v--------~~  136 (324)
T TIGR01758        66 THDPAVAFTDVDVAILVGAFPRKEGMERR-DLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALV--------LS  136 (324)
T ss_pred             cCChHHHhCCCCEEEEcCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHH--------HH
Confidence              234567889999999997554334454 889999999999999999983 455666666321   010        00


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCC
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICP  201 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~  201 (327)
                      +.+.        ..++...=..+.+..-++-...+++.+++..-++-..|+|.....
T Consensus       137 ~~sg--------~~~~~vig~gt~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~s  185 (324)
T TIGR01758       137 NYAP--------SIPPKNFSALTRLDHNRALAQVAERAGVPVSDVKNVIIWGNHSST  185 (324)
T ss_pred             HHcC--------CCCcceEEEeeehHHHHHHHHHHHHhCCChhhceEeEEEECCCCC
Confidence            0000        001112222344555555566677778888888878899986443

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.71  E-value=3.3e-06  Score=67.54  Aligned_cols=208  Identities=16%  Similarity=0.120  Sum_probs=125.3

Q ss_pred             CCCeEEEeCCc--chhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            4 QKGKVCVTGGT--GFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         4 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      .+|++||+|-.  .-|+..+++.|.++|.++..... .+.-.+++..+.+.   ......+++|+++.+++.++|.    
T Consensus         5 ~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~-~e~l~krv~~la~~---~~s~~v~~cDV~~d~~i~~~f~~i~~   80 (259)
T COG0623           5 EGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQ-GERLEKRVEELAEE---LGSDLVLPCDVTNDESIDALFATIKK   80 (259)
T ss_pred             CCceEEEEEecccccHHHHHHHHHHHcCCEEEEEec-cHHHHHHHHHHHhh---ccCCeEEecCCCCHHHHHHHHHHHHH
Confidence            37899999864  56999999999999999887777 44444444444322   1234568899999998888775    


Q ss_pred             ---CCCEEEEccCCCCC-------CCC--chHHHHHHHHHhHHHHHHHHHHhc-CCccEEE---EeccceeeeecCCCCC
Q 020334           78 ---GCAGVIHVAAPIDI-------DGK--ETEEVMTQRAVNGTIGILKSCLKS-GTVKRFV---YTSSGSTVYFSGKDVD  141 (327)
Q Consensus        78 ---~~d~vih~a~~~~~-------~~~--~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v---~~SS~~v~~~~~~~~~  141 (327)
                         +.|.+||+.|..+-       -..  +......++..-+...+.++++.. .....+|   |.+|..+.        
T Consensus        81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~v--------  152 (259)
T COG0623          81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVV--------  152 (259)
T ss_pred             hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeec--------
Confidence               57999999986541       111  111122333344445555555532 1123444   33333322        


Q ss_pred             cccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc
Q 020334          142 MLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR  218 (327)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~  218 (327)
                                       +-.+.-|.+|...|.-++.++.+.   |+|+..+-.|.+-.=-.. .+.. +..++...... 
T Consensus       153 -----------------PnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAas-gI~~-f~~~l~~~e~~-  212 (259)
T COG0623         153 -----------------PNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAAS-GIGD-FRKMLKENEAN-  212 (259)
T ss_pred             -----------------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhh-cccc-HHHHHHHHHhh-
Confidence                             224568999999999999888765   677777766644321100 0111 22222221111 


Q ss_pred             cccccccCCCeeeHHHHHHHHHHhhcCCCC
Q 020334          219 EEYSILLNISMVHIDDVARAHIFLLEYPDA  248 (327)
Q Consensus       219 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  248 (327)
                      .++.     ..+..+||.+..++++..-..
T Consensus       213 aPl~-----r~vt~eeVG~tA~fLlSdLss  237 (259)
T COG0623         213 APLR-----RNVTIEEVGNTAAFLLSDLSS  237 (259)
T ss_pred             CCcc-----CCCCHHHhhhhHHHHhcchhc
Confidence            1111     466799999999999876543

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.70  E-value=1.1e-07  Score=78.75  Aligned_cols=93  Identities=19%  Similarity=0.164  Sum_probs=57.2

Q ss_pred             CCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCC--hhHHHHHhcCCCEEEEccCCC
Q 020334           12 GGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLND--PESFDAAIAGCAGVIHVAAPI   89 (327)
Q Consensus        12 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~d~vih~a~~~   89 (327)
                      .+|||+|++|+++|+++|++|+++.|... ... .        ...+++++..+..+  .+.+.+.+.++|+|||+||..
T Consensus        23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~-~~~-~--------~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvs   92 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAGHEVTLVTTKTA-VKP-E--------PHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVS   92 (229)
T ss_pred             ccchHHHHHHHHHHHhCCCEEEEEECccc-ccC-C--------CCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccC
Confidence            35899999999999999999999988321 110 0        01355666544322  245556677899999999976


Q ss_pred             CCCCCchHHHHHHHHHhHHHHHHHHHHh
Q 020334           90 DIDGKETEEVMTQRAVNGTIGILKSCLK  117 (327)
Q Consensus        90 ~~~~~~~~~~~~~~nv~~~~~l~~~~~~  117 (327)
                      ++....   ..-..+...+.++.+++++
T Consensus        93 d~~~~~---~~~~~~~~~~~~v~~~~~~  117 (229)
T PRK06732         93 DYTPVY---MTDLEEVSASDNLNEFLTK  117 (229)
T ss_pred             Cceehh---hhhhhhhhhhhhhhhhhcc
Confidence            533211   1112233444555555553

>cd00704 MDH Malate dehydrogenase

Probab=98.67  E-value=3.8e-07  Score=79.26  Aligned_cols=161  Identities=15%  Similarity=0.062  Sum_probs=102.0

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCC-------CeEEEEEcCCC-CCcchhhhhhCCCCCCCCeEEEeCCCCCh---------
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHG-------YFVTTTVRSDP-EHKKDLSFLTNLPGASERLQIFNADLNDP---------   69 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---------   69 (327)
                      ||.|+||+|.+|++++..|+..|       +++..++++.+ +..                +-...|+.|.         
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~----------------~g~~~Dl~d~~~~~~~~~~   65 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL----------------EGVVMELQDCAFPLLKGVV   65 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc----------------ceeeeehhhhcccccCCcE
Confidence            69999999999999999998764       25888888331 111                1112222222         


Q ss_pred             --hHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhc-CCccEEEEeccce---eeeecCCCCCcc
Q 020334           70 --ESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKS-GTVKRFVYTSSGS---TVYFSGKDVDML  143 (327)
Q Consensus        70 --~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~---v~~~~~~~~~~~  143 (327)
                        ....+.++++|+|||+||.......... +.+..|+...+.+...++++ ++...++.+|-..   +|.       ..
T Consensus        66 i~~~~~~~~~~aDiVVitAG~~~~~g~tR~-dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~-------~~  137 (323)
T cd00704          66 ITTDPEEAFKDVDVAILVGAFPRKPGMERA-DLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALI-------AL  137 (323)
T ss_pred             EecChHHHhCCCCEEEEeCCCCCCcCCcHH-HHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHH-------HH
Confidence              2345678899999999997654444544 88999999999999999998 3455666665321   010       00


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                      .....         -++...-+.+.+..-++-...+++.+++..-+.-..|+|....
T Consensus       138 k~sg~---------~p~~~vig~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~  185 (323)
T cd00704         138 KNAPN---------LPPKNFTALTRLDHNRAKAQVARKLGVRVSDVKNVIIWGNHSN  185 (323)
T ss_pred             HHcCC---------CCHHHEEEeeHHHHHHHHHHHHHHhCcCHHHceeeeEEecccC
Confidence            00100         0112233556666666666666767777666666668887544

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.61  E-value=3.6e-07  Score=76.43  Aligned_cols=93  Identities=17%  Similarity=0.203  Sum_probs=69.4

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi   83 (327)
                      |+|||+||||. |+.|++.|.+.|++|++..+ +......+..        .+...+..+..|.+++.+++.  ++|+||
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~-t~~~~~~~~~--------~g~~~v~~g~l~~~~l~~~l~~~~i~~VI   70 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVT-TSEGKHLYPI--------HQALTVHTGALDPQELREFLKRHSIDILV   70 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEc-cCCccccccc--------cCCceEEECCCCHHHHHHHHHhcCCCEEE
Confidence            57999999999 99999999999999999999 4433222211        123455566778888888886  599999


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccE
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKR  123 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~  123 (327)
                      +++.++.              ...+.++.++|++.+ +.-
T Consensus        71 DAtHPfA--------------~~is~~a~~a~~~~~-ipy   95 (256)
T TIGR00715        71 DATHPFA--------------AQITTNATAVCKELG-IPY   95 (256)
T ss_pred             EcCCHHH--------------HHHHHHHHHHHHHhC-CcE
Confidence            9987543              234678889999888 543

This enzyme was found to be a monomer by gel filtration.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.56  E-value=4.1e-07  Score=81.91  Aligned_cols=94  Identities=31%  Similarity=0.538  Sum_probs=66.5

Q ss_pred             EEEeCCcchhHHHHHHHHHHCC-C-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHG-Y-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      |+|.|| |++|+.+++.|++++ + +|++.+| +..+...+..-.    ...+++++..|+.|.+++.++++++|+||||
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r-~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~   74 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADR-NPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLRGCDVVINC   74 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEES-SHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEEC-CHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHhcCCEEEEC
Confidence            799999 999999999999886 4 8999999 443332222110    1368999999999999999999999999999


Q ss_pred             cCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEE
Q 020334           86 AAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY  126 (327)
Q Consensus        86 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~  126 (327)
                      +++..                 ...++++|.+.+  .++|-
T Consensus        75 ~gp~~-----------------~~~v~~~~i~~g--~~yvD   96 (386)
T PF03435_consen   75 AGPFF-----------------GEPVARACIEAG--VHYVD   96 (386)
T ss_dssp             SSGGG-----------------HHHHHHHHHHHT---EEEE
T ss_pred             Cccch-----------------hHHHHHHHHHhC--CCeec
Confidence            98641                 246677777776  45554

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.50  E-value=1.1e-06  Score=67.00  Aligned_cols=114  Identities=17%  Similarity=0.118  Sum_probs=75.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCc-chhhhhhCCCCCC-CCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHK-KDLSFLTNLPGAS-ERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      +||.|+|++|.+|++++..|...+  .++..+++ +.... .....+....... .......   .+.    +.++++|+
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~-~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~----~~~~~aDi   72 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDI-NEDKAEGEALDLSHASAPLPSPVRITS---GDY----EALKDADI   72 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEES-SHHHHHHHHHHHHHHHHGSTEEEEEEE---SSG----GGGTTESE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEecc-Ccccceeeehhhhhhhhhccccccccc---ccc----cccccccE
Confidence            579999999999999999999885  58999999 42221 1111111110001 1222222   222    23668999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      ||-+||.......+.. +.++.|+...+.+.+.+.+.++...++.+|
T Consensus        73 vvitag~~~~~g~sR~-~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   73 VVITAGVPRKPGMSRL-DLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             EEETTSTSSSTTSSHH-HHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             EEEeccccccccccHH-HHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            9999997554444444 889999999999999999988445666555

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=98.43  E-value=2.9e-06  Score=73.09  Aligned_cols=167  Identities=17%  Similarity=0.056  Sum_probs=105.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      +||.|+|++|.+|++++-.|+.++  .++..++++  ........+.+..   .........  ..+++.+.++++|+||
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~---~~~~i~~~~--~~~~~y~~~~daDivv   73 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHIN---TPAKVTGYL--GPEELKKALKGADVVV   73 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCC---CcceEEEec--CCCchHHhcCCCCEEE
Confidence            479999999999999999999887  578888883  2222222222110   111121110  1122445678999999


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce-------eeeecCCCCCcccCCCCCChhHhhh
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS-------TVYFSGKDVDMLDETFWSDEDYIRK  156 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~-------v~~~~~~~~~~~~E~~~~~~~~~~~  156 (327)
                      -+||.......... +.++.|....+.+.+.++++++-..++.+|-..       .|..       .....         
T Consensus        74 itaG~~~k~g~tR~-dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~-------~~~s~---------  136 (310)
T cd01337          74 IPAGVPRKPGMTRD-DLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVL-------KKAGV---------  136 (310)
T ss_pred             EeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHH-------HHhcC---------
Confidence            99997544444444 889999999999999999988556777666432       1100       00010         


Q ss_pred             cCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCC
Q 020334          157 LDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPF  198 (327)
Q Consensus       157 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~  198 (327)
                       -++....|..-+..-++....+++.+++..-++ +.|+|..
T Consensus       137 -~p~~rviG~~~LDs~R~~~~la~~l~v~~~~V~-~~v~GeH  176 (310)
T cd01337         137 -YDPKRLFGVTTLDVVRANTFVAELLGLDPAKVN-VPVIGGH  176 (310)
T ss_pred             -CCHHHEEeeechHHHHHHHHHHHHhCcCHHHEE-EEEEecC
Confidence             011223444445555666667777788877777 7799987

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=98.40  E-value=1.2e-05  Score=69.94  Aligned_cols=119  Identities=18%  Similarity=0.229  Sum_probs=79.8

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG   78 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~   78 (327)
                      |+...+||.|+|+ |.+|++++-.|+..|.  ++..++++..........+.+......++....+   +   . +.+++
T Consensus         2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~---~---~-~~~~~   73 (315)
T PRK00066          2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG---D---Y-SDCKD   73 (315)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC---C---H-HHhCC
Confidence            4445679999998 9999999999998885  7999998332222222223221111122333222   2   2 23678


Q ss_pred             CCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           79 CAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        79 ~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      +|+||.+||.......+.. +.+..|....+.+++.+++.++..+++.+|
T Consensus        74 adivIitag~~~k~g~~R~-dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         74 ADLVVITAGAPQKPGETRL-DLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             CCEEEEecCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            9999999997544344444 889999999999999999987445666555

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.40  E-value=1.2e-06  Score=71.01  Aligned_cols=79  Identities=25%  Similarity=0.212  Sum_probs=59.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhh-hhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSF-LTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ..++++|+||+|.+|+.+++.|++.|++|++++| +..+...+.. +...    .+.+....|..+.+++.+.++++|+|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R-~~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~diV  101 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGR-DLERAQKAADSLRAR----FGEGVGAVETSDDAARAAAIKGADVV  101 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHhh----cCCcEEEeeCCCHHHHHHHHhcCCEE
Confidence            3578999999999999999999999999999999 4333222211 1111    13455567888888888899999999


Q ss_pred             EEccC
Q 020334           83 IHVAA   87 (327)
Q Consensus        83 ih~a~   87 (327)
                      |++.+
T Consensus       102 i~at~  106 (194)
T cd01078         102 FAAGA  106 (194)
T ss_pred             EECCC
Confidence            98764

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK05442 malate dehydrogenase; Provisional

Probab=98.32  E-value=1.9e-05  Score=68.75  Aligned_cols=175  Identities=14%  Similarity=0.042  Sum_probs=106.6

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCC-------eEEEEEcCCCC--CcchhhhhhCCC-CCCCCeEEEeCCCCChh
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGY-------FVTTTVRSDPE--HKKDLSFLTNLP-GASERLQIFNADLNDPE   70 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~   70 (327)
                      |+. +.||.|+|++|.+|++++-.|+..|.       ++..+++....  .......+.+.. ....++.+..       
T Consensus         1 ~~~-~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-------   72 (326)
T PRK05442          1 MKA-PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITD-------   72 (326)
T ss_pred             CCC-CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEec-------
Confidence            553 56899999999999999999987652       78888883221  111111121110 0011222211       


Q ss_pred             HHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccce---eeeecCCCCCcccCC
Q 020334           71 SFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGS---TVYFSGKDVDMLDET  146 (327)
Q Consensus        71 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~---v~~~~~~~~~~~~E~  146 (327)
                      ...+.++++|+||-+||...-...+.. +.+..|+...+.+.+.+.++. +...++.+|...   +|.        .-+.
T Consensus        73 ~~y~~~~daDiVVitaG~~~k~g~tR~-dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v--------~~k~  143 (326)
T PRK05442         73 DPNVAFKDADVALLVGARPRGPGMERK-DLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALI--------AMKN  143 (326)
T ss_pred             ChHHHhCCCCEEEEeCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHH--------HHHH
Confidence            123457789999999996544444444 889999999999999999954 355677666421   010        0000


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                      ++        .-++....|.+-+..-++-...+++.+++..-++...|+|....
T Consensus       144 s~--------g~p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG~  189 (326)
T PRK05442        144 AP--------DLPAENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNHSA  189 (326)
T ss_pred             cC--------CCCHHHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECCcC
Confidence            00        01223345556666666666677777888888877777887643

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=98.32  E-value=1.7e-05  Score=69.02  Aligned_cols=172  Identities=13%  Similarity=0.030  Sum_probs=106.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-------eEEEEEcCCCC--CcchhhhhhCCC-CCCCCeEEEeCCCCChhHHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-------FVTTTVRSDPE--HKKDLSFLTNLP-GASERLQIFNADLNDPESFDA   74 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~   74 (327)
                      ..||.|+|++|++|++++..|+..|.       ++..+++....  .......+.+.. ....++.. ..      ...+
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~~------~~~~   75 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVA-TT------DPEE   75 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEE-ec------ChHH
Confidence            46899999999999999999998873       78888883211  122222222111 00112221 11      1234


Q ss_pred             HhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCC-ccEEEEeccce---eeeecCCCCCcccCCCCCC
Q 020334           75 AIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT-VKRFVYTSSGS---TVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        75 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~~v~~SS~~---v~~~~~~~~~~~~E~~~~~  150 (327)
                      .++++|+||.+||...-...+.. +.+..|+...+.+.+.++++.+ ...++.+|-..   +|.        .-+.++  
T Consensus        76 ~~~daDvVVitAG~~~k~g~tR~-dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v--------~~k~s~--  144 (323)
T TIGR01759        76 AFKDVDAALLVGAFPRKPGMERA-DLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALI--------ASKNAP--  144 (323)
T ss_pred             HhCCCCEEEEeCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHH--------HHHHcC--
Confidence            57789999999997544444444 8899999999999999999874 45566555311   010        001100  


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                            .-++....|.+.+..-++-...+++.+++..-++-..|+|....
T Consensus       145 ------g~p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~  188 (323)
T TIGR01759       145 ------DIPPKNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSN  188 (323)
T ss_pred             ------CCCHHHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCC
Confidence                  01223345556666666666667777888888877788897644

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.31  E-value=2.8e-06  Score=75.85  Aligned_cols=75  Identities=20%  Similarity=0.155  Sum_probs=57.0

Q ss_pred             CCCeEEEeCC----------------cchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCC
Q 020334            4 QKGKVCVTGG----------------TGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN   67 (327)
Q Consensus         4 ~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   67 (327)
                      .+++||||||                ||.+|.+++++|.++|++|+++++ +.. ..    .      ..+  ....|+.
T Consensus       187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~-~~~-~~----~------~~~--~~~~dv~  252 (399)
T PRK05579        187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSG-PVN-LP----T------PAG--VKRIDVE  252 (399)
T ss_pred             CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCC-Ccc-cc----C------CCC--cEEEccC
Confidence            3689999999                999999999999999999999988 321 11    0      012  2356888


Q ss_pred             ChhHHHHHh----cCCCEEEEccCCCCCC
Q 020334           68 DPESFDAAI----AGCAGVIHVAAPIDID   92 (327)
Q Consensus        68 d~~~~~~~~----~~~d~vih~a~~~~~~   92 (327)
                      +.+++.+.+    .++|++||+||..++.
T Consensus       253 ~~~~~~~~v~~~~~~~DilI~~Aav~d~~  281 (399)
T PRK05579        253 SAQEMLDAVLAALPQADIFIMAAAVADYR  281 (399)
T ss_pred             CHHHHHHHHHHhcCCCCEEEEcccccccc
Confidence            887776655    3689999999976543

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.27  E-value=1e-05  Score=70.26  Aligned_cols=117  Identities=18%  Similarity=0.150  Sum_probs=75.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCC--CCcchh-hhhhCC-CCCCCCeEEEeCCCCChhHHHHHhcCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDP--EHKKDL-SFLTNL-PGASERLQIFNADLNDPESFDAAIAGC   79 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~--~~~~~~-~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~   79 (327)
                      |||.|+|+||++|.+++..|+..|+  +|++++| ..  +..... ..+... .......+....  .|   .+ .+.++
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~-~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~--~d---~~-~l~~a   73 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISR-PKSLEKLKGLRLDIYDALAAAGIDAEIKIS--SD---LS-DVAGS   73 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEEC-cccccccccccchhhhchhccCCCcEEEEC--CC---HH-HhCCC
Confidence            5799999999999999999999986  5999999 33  111111 111110 000001111111  12   23 37899


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccc
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSG  130 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~  130 (327)
                      |+||-++|......... .+.++.|+...+.+++.+.+..+-..+|.+++.
T Consensus        74 DiViitag~p~~~~~~r-~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~np  123 (309)
T cd05294          74 DIVIITAGVPRKEGMSR-LDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNP  123 (309)
T ss_pred             CEEEEecCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            99999998654333333 378899999999999999888644577777763

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.23  E-value=4e-06  Score=72.81  Aligned_cols=72  Identities=26%  Similarity=0.276  Sum_probs=51.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHC-C-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDH-G-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      .+++|+||||+|+||+.++++|+++ | .+++++.| +..+...+..           ++..+++.   .+.+.+.++|+
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R-~~~rl~~La~-----------el~~~~i~---~l~~~l~~aDi  218 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVAR-QQERLQELQA-----------ELGGGKIL---SLEEALPEADI  218 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcC-CHHHHHHHHH-----------HhccccHH---hHHHHHccCCE
Confidence            3689999999999999999999864 5 58888888 4333222211           11123443   36678889999


Q ss_pred             EEEccCCCC
Q 020334           82 VIHVAAPID   90 (327)
Q Consensus        82 vih~a~~~~   90 (327)
                      |||+++...
T Consensus       219 Vv~~ts~~~  227 (340)
T PRK14982        219 VVWVASMPK  227 (340)
T ss_pred             EEECCcCCc
Confidence            999998644

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.22  E-value=4.5e-06  Score=70.94  Aligned_cols=88  Identities=17%  Similarity=0.305  Sum_probs=65.5

Q ss_pred             eEEEeCCcchhHHHHHHHHHH----CCCeEEEEEcCCCCCc-chhhhhhCCC-CCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            7 KVCVTGGTGFIGSWLIMRLLD----HGYFVTTTVRSDPEHK-KDLSFLTNLP-GASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~-~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      -++|.|||||-|.++++++++    .|...-+..| +.++. ..+.+..... ...+...++.+|.+|++++.+..+.+.
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGR-n~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~   85 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGR-NEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQAR   85 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecC-CHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhE
Confidence            588999999999999999998    6788888889 54333 2222221111 111233488999999999999999999


Q ss_pred             EEEEccCCCCCCCCc
Q 020334           81 GVIHVAAPIDIDGKE   95 (327)
Q Consensus        81 ~vih~a~~~~~~~~~   95 (327)
                      +|+||+|++.+..+.
T Consensus        86 vivN~vGPyR~hGE~  100 (423)
T KOG2733|consen   86 VIVNCVGPYRFHGEP  100 (423)
T ss_pred             EEEeccccceecCcH
Confidence            999999998755443

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=98.19  E-value=1.2e-06  Score=56.08  Aligned_cols=39  Identities=15%  Similarity=0.161  Sum_probs=27.4

Q ss_pred             ccccccccChHHH-HhccccccccHHHHHHHHHHHHHHcC
Q 020334          287 EGYKLSALSSKKL-LDICFTYKYGIDEMFDGAIKCCKERG  325 (327)
Q Consensus       287 ~~~~~~~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~~  325 (327)
                      .+......|++|+ ++|||+|+++|+++++++.+|.+++.
T Consensus        20 GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~np   59 (62)
T PF13950_consen   20 GDPAHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKNP   59 (62)
T ss_dssp             T--SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHST
T ss_pred             CchhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHCc
Confidence            6677889999999 99999999999999999999998753

...

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=98.11  E-value=8e-05  Score=64.73  Aligned_cols=170  Identities=17%  Similarity=0.098  Sum_probs=101.1

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchh-hhhhCCCC-CCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDL-SFLTNLPG-ASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~-~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      +||.|+|+ |.+|+.++..|+..|  ++|.+++| +++..... ..+..... .........   .+.   + .+.++|+
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~-~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~---~-~l~~aDI   71 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDI-NEEKAEGEALDLEDALAFLPSPVKIKA---GDY---S-DCKDADI   71 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeC-CcchhhHhHhhHHHHhhccCCCeEEEc---CCH---H-HhCCCCE
Confidence            47999996 999999999999998  68999999 44333222 22211100 001222222   222   2 3578999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      ||.++|.......+.. +.+..|+...+.+.+.++++++...++.+|...-.-    .........          -++.
T Consensus        72 VIitag~~~~~g~~R~-dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~d~~----~~~~~~~~g----------~p~~  136 (306)
T cd05291          72 VVITAGAPQKPGETRL-DLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVDVI----TYVVQKLSG----------LPKN  136 (306)
T ss_pred             EEEccCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCeEEEEecChHHHH----HHHHHHHhC----------cCHH
Confidence            9999987544444444 889999999999999999987555666666321000    000000000          0112


Q ss_pred             hhhHh-hhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          162 KSYVL-TKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       162 ~~Y~~-sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                      ...|. +-+..-++...++++.+++..-++. .|+|....
T Consensus       137 ~v~g~gt~LDs~R~~~~la~~l~v~~~~v~~-~V~G~Hg~  175 (306)
T cd05291         137 RVIGTGTSLDTARLRRALAEKLNVDPRSVHA-YVLGEHGD  175 (306)
T ss_pred             HEeeccchHHHHHHHHHHHHHHCCCcccceE-EEEecCCC
Confidence            22344 2233445555556667888887876 69998643

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=98.09  E-value=8.6e-05  Score=64.23  Aligned_cols=172  Identities=17%  Similarity=0.096  Sum_probs=101.7

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      ||.|+|++|.||++++-.|+.++.  ++..+++ ++ .......+.+..   .........  +.+++.+.++++|+||-
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di-~~-a~g~a~DL~~~~---~~~~i~~~~--~~~~~~~~~~daDivvi   73 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDI-AG-AAGVAADLSHIP---TAASVKGFS--GEEGLENALKGADVVVI   73 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecC-CC-CcEEEchhhcCC---cCceEEEec--CCCchHHHcCCCCEEEE
Confidence            589999999999999999988864  7888888 43 222222222211   112222101  11124457889999999


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCC---cccCCCCCChhHhhhcCCCc
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVD---MLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~---~~~E~~~~~~~~~~~~~~~~  161 (327)
                      +||.......+.. +.+..|+...+.+.+.++++++...++.+|-..        +.   .+++..+..     ..-++.
T Consensus        74 taG~~~~~g~~R~-dll~~N~~I~~~i~~~i~~~~p~~iiivvsNPv--------Dv~~~i~t~~~~~~-----sg~p~~  139 (312)
T TIGR01772        74 PAGVPRKPGMTRD-DLFNVNAGIVKDLVAAVAESCPKAMILVITNPV--------NSTVPIAAEVLKKK-----GVYDPN  139 (312)
T ss_pred             eCCCCCCCCccHH-HHHHHhHHHHHHHHHHHHHhCCCeEEEEecCch--------hhHHHHHHHHHHHh-----cCCChH
Confidence            9997554444444 889999999999999999987555677666432        10   000000000     000112


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                      ...|..-+..-++-..++++.+++...+ -+.|+|...+
T Consensus       140 rViG~g~LDsaR~r~~la~~l~v~~~~v-~~~ViGeHg~  177 (312)
T TIGR01772       140 KLFGVTTLDIVRANTFVAELKGKDPMEV-NVPVIGGHSG  177 (312)
T ss_pred             HEEeeecchHHHHHHHHHHHhCCCHHHe-EEEEEEecCC
Confidence            2334333454555666667777766665 4458887643

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=98.09  E-value=6.8e-05  Score=67.51  Aligned_cols=175  Identities=13%  Similarity=-0.010  Sum_probs=105.0

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHC-------CC--eEEEEEcCCCCCcchhhhhhCCC-CCCCCeEEEeCCCCChhHHHHH
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDH-------GY--FVTTTVRSDPEHKKDLSFLTNLP-GASERLQIFNADLNDPESFDAA   75 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~   75 (327)
                      -||.|+|++|.+|++++-.|+..       +.  ++..+++...........+.+.. ....++.+..+   +    .+.
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~---~----ye~  173 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID---P----YEV  173 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC---C----HHH
Confidence            47999999999999999999987       54  67888883332222222222211 00112222222   2    235


Q ss_pred             hcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHh-cCCccEEEEeccceeeeecCCCCCcccCCCCCChhHh
Q 020334           76 IAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLK-SGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYI  154 (327)
Q Consensus        76 ~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~-~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~  154 (327)
                      ++++|+||-+||.......+.. +.++.|+...+.+.+.+.+ +++...+|.+|-..=.     --...-+.+.      
T Consensus       174 ~kdaDiVVitAG~prkpG~tR~-dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv-----~t~v~~k~sg------  241 (444)
T PLN00112        174 FQDAEWALLIGAKPRGPGMERA-DLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNT-----NALICLKNAP------  241 (444)
T ss_pred             hCcCCEEEECCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHH-----HHHHHHHHcC------
Confidence            6789999999997554444444 8899999999999999999 5645567766642100     0000000000      


Q ss_pred             hhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCC
Q 020334          155 RKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICP  201 (327)
Q Consensus       155 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~  201 (327)
                        ..+....-..+.+..-++-...+++.+++..-++-..|+|.....
T Consensus       242 --~~~~rViGtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGds  286 (444)
T PLN00112        242 --NIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTT  286 (444)
T ss_pred             --CCCcceEEeeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCCc
Confidence              001122233344555555556667778888888888899986543

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=98.06  E-value=0.00015  Score=62.08  Aligned_cols=167  Identities=18%  Similarity=0.026  Sum_probs=98.0

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      +||.|+|| |+||+.++-.|+.++  .++..+++. .+.. .....+.+.......-..+.+| .+    .+.++++|+|
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~-~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiV   73 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDIN-EEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIV   73 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcc-cccccchhcchhhcchhccCceEEecC-CC----hhhhcCCCEE
Confidence            47999999 999999999998774  489999994 2222 1112222111111111223333 22    2346789999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccc---eeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSG---STVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~---~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      +-+||...-...+.. +.+..|....+.+.+.+.+.++...|+.+|-.   .+|-        .-+.+..        +.
T Consensus        74 vitAG~prKpGmtR~-DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtNPvD~~ty~--------~~k~sg~--------p~  136 (313)
T COG0039          74 VITAGVPRKPGMTRL-DLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNPVDILTYI--------AMKFSGF--------PK  136 (313)
T ss_pred             EEeCCCCCCCCCCHH-HHHHhhHHHHHHHHHHHHhhCCCeEEEEecCcHHHHHHH--------HHHhcCC--------Cc
Confidence            999987654444555 88999999999999999998843455544421   0010        0000000        01


Q ss_pred             CchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecC
Q 020334          160 WGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGP  197 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~  197 (327)
                      ....-+.+.+..-++-...+++.+++...++-. |.|.
T Consensus       137 ~rvig~gt~LDsaR~~~~lae~~~v~~~~V~~~-ViGe  173 (313)
T COG0039         137 NRVIGSGTVLDSARFRTFLAEKLGVSPKDVHAY-VIGE  173 (313)
T ss_pred             cceecccchHHHHHHHHHHHHHhCCChhHceee-Eecc
Confidence            111234444555555566667777777777665 5564

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.00  E-value=4.2e-05  Score=68.02  Aligned_cols=101  Identities=17%  Similarity=0.229  Sum_probs=63.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHH-HhcCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDA-AIAGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d~   81 (327)
                      ++++|.|.||||++|..|++.|.++ +.+|..+.+ .....+.+...        ......+|..+.+.++. .++++|+
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s-~~saG~~i~~~--------~~~l~~~~~~~~~~~~~~~~~~~Dv  107 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTA-DRKAGQSFGSV--------FPHLITQDLPNLVAVKDADFSDVDA  107 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEC-hhhcCCCchhh--------CccccCccccceecCCHHHhcCCCE
Confidence            4679999999999999999999998 678998887 32222211111        11122234433333322 2478999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceee
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTV  133 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~  133 (327)
                      |+-+.+.          .       ...+++..+. .+  .++|-.||..-+
T Consensus       108 Vf~Alp~----------~-------~s~~i~~~~~-~g--~~VIDlSs~fRl  139 (381)
T PLN02968        108 VFCCLPH----------G-------TTQEIIKALP-KD--LKIVDLSADFRL  139 (381)
T ss_pred             EEEcCCH----------H-------HHHHHHHHHh-CC--CEEEEcCchhcc
Confidence            9877652          1       2455666653 34  689999998765

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.99  E-value=0.00014  Score=63.09  Aligned_cols=172  Identities=17%  Similarity=0.085  Sum_probs=99.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEe-CCCCChhHHHHHhcCCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN-ADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~D~~d~~~~~~~~~~~d~   81 (327)
                      .+||.|+|+ |.+|+.++..|+..|  .++..++++..........+.....-........ +|      ++ .++++|+
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~d------y~-~~~~adi   74 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKD------YS-VTANSKV   74 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCC------HH-HhCCCCE
Confidence            468999996 999999999998876  4788888833212222222222110011112222 22      22 3678999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      ||-+||.......+.. +.+..|+...+.+.+.++++++...++.+|-..-.-    .........          -++.
T Consensus        75 vvitaG~~~k~g~~R~-dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~----t~~~~k~sg----------~p~~  139 (312)
T cd05293          75 VIVTAGARQNEGESRL-DLVQRNVDIFKGIIPKLVKYSPNAILLVVSNPVDIM----TYVAWKLSG----------LPKH  139 (312)
T ss_pred             EEECCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCcEEEEccChHHHH----HHHHHHHhC----------CCHH
Confidence            9999987554334444 889999999999999999987555677666321000    000000000          0112


Q ss_pred             hhhHh-hhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          162 KSYVL-TKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       162 ~~Y~~-sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                      ...|. +-....++-..+++..+++..-++.. |+|....
T Consensus       140 ~viG~gt~Ld~~R~~~~la~~l~v~~~~v~~~-v~GeHG~  178 (312)
T cd05293         140 RVIGSGCNLDSARFRYLIAERLGVAPSSVHGW-IIGEHGD  178 (312)
T ss_pred             HEEecCchHHHHHHHHHHHHHhCCChhhEEEE-EeecCCC
Confidence            23444 23334445555566668877777664 5787643

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.99  E-value=1.6e-05  Score=65.74  Aligned_cols=63  Identities=24%  Similarity=0.229  Sum_probs=44.9

Q ss_pred             CcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHh-------cCCCEEEEc
Q 020334           13 GTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAI-------AGCAGVIHV   85 (327)
Q Consensus        13 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-------~~~d~vih~   85 (327)
                      +||.||.++++.|+++|++|+++++...     +..        .  ....+|+.+.++..+++       .++|++||+
T Consensus        23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-----l~~--------~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnn   87 (227)
T TIGR02114        23 STGHLGKIITETFLSAGHEVTLVTTKRA-----LKP--------E--PHPNLSIREIETTKDLLITLKELVQEHDILIHS   87 (227)
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEcChhh-----ccc--------c--cCCcceeecHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4899999999999999999998876211     000        0  01347888877665543       368999999


Q ss_pred             cCCCC
Q 020334           86 AAPID   90 (327)
Q Consensus        86 a~~~~   90 (327)
                      ||...
T Consensus        88 Agv~d   92 (227)
T TIGR02114        88 MAVSD   92 (227)
T ss_pred             CEecc
Confidence            99654

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02602 lactate dehydrogenase

Probab=97.98  E-value=0.00028  Score=62.04  Aligned_cols=167  Identities=18%  Similarity=0.108  Sum_probs=98.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      +||.|+|+ |.+|++++-.|+..+  .++..+++ +.+.. .....+.+.........+ .++ .|   ++ .++++|+|
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi-~~~~~~g~a~DL~~~~~~~~~~~i-~~~-~d---y~-~~~daDiV  109 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDV-NPDKLRGEMLDLQHAAAFLPRTKI-LAS-TD---YA-VTAGSDLC  109 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-CCchhhHHHHHHHhhhhcCCCCEE-EeC-CC---HH-HhCCCCEE
Confidence            58999996 999999999999876  47888988 43322 222222221111112222 211 12   22 37789999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce---eeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS---TVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~---v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |-+||.......+.. +.+..|+...+.+.+.++++++...++.+|-..   +|.       ......          -+
T Consensus       110 VitAG~~~k~g~tR~-dll~~N~~I~~~i~~~I~~~~p~~ivivvtNPvdv~t~~-------~~k~sg----------~p  171 (350)
T PLN02602        110 IVTAGARQIPGESRL-NLLQRNVALFRKIIPELAKYSPDTILLIVSNPVDVLTYV-------AWKLSG----------FP  171 (350)
T ss_pred             EECCCCCCCcCCCHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHH-------HHHHhC----------CC
Confidence            999997543334444 889999999999999999987555677666311   000       000000          01


Q ss_pred             CchhhHhh-hHHHHHHHHHHHHHcCCcEEEEecCceecCCC
Q 020334          160 WGKSYVLT-KTLTERAALEFAEEHGLDLVTLIPSFVVGPFI  199 (327)
Q Consensus       160 ~~~~Y~~s-K~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~  199 (327)
                      +....|.. -...-++...++++.+++..-++.. |+|...
T Consensus       172 ~~rviG~gt~LDs~R~r~~lA~~l~v~~~~V~~~-ViGeHG  211 (350)
T PLN02602        172 ANRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAY-IVGEHG  211 (350)
T ss_pred             HHHEEeecchHHHHHHHHHHHHHhCCCccceeee-EEecCC
Confidence            11122332 2223344455566678888877776 778754

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.98  E-value=0.00014  Score=53.83  Aligned_cols=98  Identities=23%  Similarity=0.309  Sum_probs=56.1

Q ss_pred             eEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      ||.|+||||++|+.|++.|.+. .+++..+..+.......+........  ........+ .+.+.    +.++|+|+.|
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~-~~~~~----~~~~Dvvf~a   73 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPK--GFEDLSVED-ADPEE----LSDVDVVFLA   73 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGT--TTEEEBEEE-TSGHH----HTTESEEEE-
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccc--cccceeEee-cchhH----hhcCCEEEec
Confidence            6899999999999999999986 45665555534423333333221110  011221122 34333    3789999988


Q ss_pred             cCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccc
Q 020334           86 AAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSG  130 (327)
Q Consensus        86 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~  130 (327)
                      ...          .       ....+...+.+.+  .++|=.|+.
T Consensus        74 ~~~----------~-------~~~~~~~~~~~~g--~~ViD~s~~   99 (121)
T PF01118_consen   74 LPH----------G-------ASKELAPKLLKAG--IKVIDLSGD   99 (121)
T ss_dssp             SCH----------H-------HHHHHHHHHHHTT--SEEEESSST
T ss_pred             Cch----------h-------HHHHHHHHHhhCC--cEEEeCCHH
Confidence            652          1       1345566666666  366666654

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.95  E-value=8.2e-05  Score=63.24  Aligned_cols=114  Identities=18%  Similarity=0.066  Sum_probs=76.8

Q ss_pred             EEEeCCcchhHHHHHHHHHHCC----CeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHG----YFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      |.|+||+|.+|..++..|+..|    .+|..+++ +.+.... ...+.+........++..     ..++.+.++++|+|
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~-~~~~l~~~~~dl~~~~~~~~~~~i~~-----~~d~~~~~~~aDiV   74 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDI-DEEKLKGVAMDLQDAVEPLADIKVSI-----TDDPYEAFKDADVV   74 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeC-CcccchHHHHHHHHhhhhccCcEEEE-----CCchHHHhCCCCEE
Confidence            5789999999999999999888    78999998 4333222 222222111000111111     12245667899999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      |.+++.......... .....|+...+.+++.+++..+-..++.+|
T Consensus        75 v~t~~~~~~~g~~r~-~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          75 IITAGVGRKPGMGRL-DLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             EECCCCCCCcCCCHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999986554444444 788999999999999999987555666665

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.95  E-value=2.7e-05  Score=66.95  Aligned_cols=78  Identities=19%  Similarity=0.152  Sum_probs=56.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCe-EEEEEcCCC---CCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYF-VTTTVRSDP---EHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIAGC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~---~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~   79 (327)
                      +++++|+|| |.+|++++..|++.|++ |++++| +.   ++...+ ..+...   ...+.....|+.+.+.+.+.+..+
T Consensus       126 ~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R-~~~~~~~a~~l~~~l~~~---~~~~~~~~~d~~~~~~~~~~~~~~  200 (289)
T PRK12548        126 GKKLTVIGA-GGAATAIQVQCALDGAKEITIFNI-KDDFYERAEQTAEKIKQE---VPECIVNVYDLNDTEKLKAEIASS  200 (289)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeC-CchHHHHHHHHHHHHhhc---CCCceeEEechhhhhHHHhhhccC
Confidence            578999998 89999999999999986 999999 43   222222 112111   123455668888888888888889


Q ss_pred             CEEEEccC
Q 020334           80 AGVIHVAA   87 (327)
Q Consensus        80 d~vih~a~   87 (327)
                      |+|||+-.
T Consensus       201 DilINaTp  208 (289)
T PRK12548        201 DILVNATL  208 (289)
T ss_pred             CEEEEeCC
Confidence            99998764

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.94  E-value=0.00011  Score=64.13  Aligned_cols=169  Identities=14%  Similarity=0.033  Sum_probs=97.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchh-hhhhCCCC-CCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDL-SFLTNLPG-ASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      |+||.|+|| |.+|+.++..|+..|. +|..+++ +++..... ..+..... .....+. ..    ..++ +.++++|+
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~-~~~~~~~~~~dl~~~~~~~~~~~~i-~~----~~d~-~~~~~aDi   73 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDI-VEGVPQGKALDIAEAAPVEGFDTKI-TG----TNDY-EDIAGSDV   73 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEEC-CCchhHHHHHHHHhhhhhcCCCcEE-Ee----CCCH-HHHCCCCE
Confidence            468999998 9999999999998865 9999999 44333221 11111100 0011111 11    1113 24678999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecccee---eeecCCCCCcccCCCCCChhHhhhcC
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGST---VYFSGKDVDMLDETFWSDEDYIRKLD  158 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v---~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (327)
                      ||.+++......... .+.+..|+.....+++.+.+..+...+|.+|-..-   |...       ....          -
T Consensus        74 Vii~~~~p~~~~~~r-~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~d~~~~~~~-------~~s~----------~  135 (307)
T PRK06223         74 VVITAGVPRKPGMSR-DDLLGINAKIMKDVAEGIKKYAPDAIVIVVTNPVDAMTYVAL-------KESG----------F  135 (307)
T ss_pred             EEECCCCCCCcCCCH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHH-------HHhC----------C
Confidence            999998644333333 37788999999999999988764455666653210   1000       0000          0


Q ss_pred             CCchhhHhh-hHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          159 IWGKSYVLT-KTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       159 ~~~~~Y~~s-K~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                      ++....|.. -...-++-..+++..+++..-++ +.++|....
T Consensus       136 ~~~~viG~gt~lds~r~~~~la~~l~v~~~~v~-~~viGehg~  177 (307)
T PRK06223        136 PKNRVIGMAGVLDSARFRTFIAEELNVSVKDVT-AFVLGGHGD  177 (307)
T ss_pred             CcccEEEeCCCcHHHHHHHHHHHHhCcChhhCc-ccEEcCCCC
Confidence            112234443 22333445555666777777776 446787633

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.92  E-value=0.00041  Score=60.28  Aligned_cols=170  Identities=18%  Similarity=0.121  Sum_probs=98.1

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      |+|.|+|+ |.+|+.++..|+.+|  .+|.++++ +..... ....+..............+   |   + +.++++|+|
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~-~~~~~~g~a~dl~~~~~~~~~~~i~~~---d---~-~~l~~aDiV   71 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDI-NKAKAEGEAMDLAHGTPFVKPVRIYAG---D---Y-ADCKGADVV   71 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEEC-CchhhhhHHHHHHccccccCCeEEeeC---C---H-HHhCCCCEE
Confidence            36999997 999999999999998  68999999 443222 22222211111111222222   2   2 247789999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      |.+++.......+.. +....|+...+.+.+.+++.++...++.++...-.-     -..+.+.+-         -++..
T Consensus        72 iita~~~~~~~~~r~-dl~~~n~~i~~~~~~~l~~~~~~giiiv~tNP~d~~-----~~~~~~~sg---------~p~~~  136 (308)
T cd05292          72 VITAGANQKPGETRL-DLLKRNVAIFKEIIPQILKYAPDAILLVVTNPVDVL-----TYVAYKLSG---------LPPNR  136 (308)
T ss_pred             EEccCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHH-----HHHHHHHHC---------cCHHH
Confidence            999986543333444 788999999999999999887444555554211000     000000000         01122


Q ss_pred             hhHh-hhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          163 SYVL-TKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       163 ~Y~~-sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                      ..|. +-+..-++-..++++.+++..-++.. |+|....
T Consensus       137 viG~gt~LDs~R~~~~la~~~~v~~~~v~~~-viGeHg~  174 (308)
T cd05292         137 VIGSGTVLDTARFRYLLGEHLGVDPRSVHAY-IIGEHGD  174 (308)
T ss_pred             eecccchhhHHHHHHHHHHHhCCCccceece-eeccCCC
Confidence            2333 22233444555566678888888754 8887633

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.90  E-value=0.00043  Score=59.93  Aligned_cols=168  Identities=16%  Similarity=0.061  Sum_probs=101.6

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcchhhhhhCCCC-CC-CCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKDLSFLTNLPG-AS-ERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~-~~-~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ||.|+|+ |++|+.++..|+.++.  ++..++............+.+... .. .+++...+|       .+.++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence            5889998 9999999999998763  788898833222222222222111 01 134444333       2457789999


Q ss_pred             EEccCCCCCCCCch-HHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce---eeeecCCCCCcccCCCCCChhHhhhcC
Q 020334           83 IHVAAPIDIDGKET-EEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS---TVYFSGKDVDMLDETFWSDEDYIRKLD  158 (327)
Q Consensus        83 ih~a~~~~~~~~~~-~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~---v~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (327)
                      |-+||......... ..+.+..|+...+.+.+.++++++...++.+|-..   +|...       ..+-          -
T Consensus        73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNPvDv~t~~~~-------k~sg----------~  135 (307)
T cd05290          73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLDIAVYIAA-------TEFD----------Y  135 (307)
T ss_pred             EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCcHHHHHHHHH-------HHhC----------c
Confidence            99999754333331 23889999999999999999998445555555321   01000       0000          0


Q ss_pred             CCchhhHh-hhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          159 IWGKSYVL-TKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       159 ~~~~~Y~~-sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                      ++.-..|. +-+..-++-...+++.+++...++.. |+|....
T Consensus       136 p~~rviG~gt~LDs~R~~~~la~~l~v~~~~V~~~-ViGeHGd  177 (307)
T cd05290         136 PANKVIGTGTMLDTARLRRIVADKYGVDPKNVTGY-VLGEHGS  177 (307)
T ss_pred             ChhheecccchHHHHHHHHHHHHHhCCCcccEEEE-EEecCCC
Confidence            11112333 34455555556667778888888876 8898644

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.87  E-value=0.00018  Score=62.76  Aligned_cols=116  Identities=14%  Similarity=0.080  Sum_probs=75.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchh-hhhhCCCC-CCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDL-SFLTNLPG-ASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~-~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      .+||.|+|| |.+|+.++..|+..| .+|..+++ +.+..... ..+..... ...... +.+ -.|   ++ .++++|+
T Consensus         5 ~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di-~~~~~~g~~lDl~~~~~~~~~~~~-i~~-~~d---~~-~l~~ADi   76 (319)
T PTZ00117          5 RKKISMIGA-GQIGSTVALLILQKNLGDVVLYDV-IKGVPQGKALDLKHFSTLVGSNIN-ILG-TNN---YE-DIKDSDV   76 (319)
T ss_pred             CcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEEC-CCccchhHHHHHhhhccccCCCeE-EEe-CCC---HH-HhCCCCE
Confidence            468999997 999999999999888 68999998 43322211 11111100 001112 221 112   33 5688999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      ||.+++.......... +.+..|....+.+++.+.+..+...++.+|-
T Consensus        77 VVitag~~~~~g~~r~-dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         77 VVITAGVQRKEEMTRE-DLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             EEECCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999986543333444 7889999999999999999874555777664

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.87  E-value=6.4e-05  Score=59.79  Aligned_cols=78  Identities=19%  Similarity=0.205  Sum_probs=48.1

Q ss_pred             CCeEEEeCC----------------cchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCC
Q 020334            5 KGKVCVTGG----------------TGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLND   68 (327)
Q Consensus         5 ~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d   68 (327)
                      +++||||+|                ||-.|.+|++++..+|++|+.+.....-..            +.+++.+..+-..
T Consensus         3 gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~------------p~~~~~i~v~sa~   70 (185)
T PF04127_consen    3 GKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPP------------PPGVKVIRVESAE   70 (185)
T ss_dssp             T-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----------------TTEEEEE-SSHH
T ss_pred             CCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccc------------cccceEEEecchh
Confidence            688999865                799999999999999999999988321111            1366666643322


Q ss_pred             --hhHHHHHhcCCCEEEEccCCCCCCCC
Q 020334           69 --PESFDAAIAGCAGVIHVAAPIDIDGK   94 (327)
Q Consensus        69 --~~~~~~~~~~~d~vih~a~~~~~~~~   94 (327)
                        .+.+.+.+++.|++||+||..++...
T Consensus        71 em~~~~~~~~~~~Di~I~aAAVsDf~p~   98 (185)
T PF04127_consen   71 EMLEAVKELLPSADIIIMAAAVSDFRPE   98 (185)
T ss_dssp             HHHHHHHHHGGGGSEEEE-SB--SEEES
T ss_pred             hhhhhhccccCcceeEEEecchhheeeh
Confidence              12334455678999999998875543

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.85  E-value=0.00021  Score=63.40  Aligned_cols=172  Identities=13%  Similarity=-0.017  Sum_probs=99.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-----eEE--EE--EcCCCCCcchhhhhhCCC-CCCCCeEEEeCCCCChhHHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-----FVT--TT--VRSDPEHKKDLSFLTNLP-GASERLQIFNADLNDPESFDA   74 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-----~V~--~~--~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~   74 (327)
                      .-||.|+||+|.+|++++-.|+..+.     +|.  .+  ++...........+.+.. ....++.+..+   +    .+
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~---~----y~  116 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGID---P----YE  116 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecC---C----HH
Confidence            34899999999999999999988752     232  23  442222122222222111 00112222222   2    24


Q ss_pred             HhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccce---eeeecCCCCCcccCCCCCC
Q 020334           75 AIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGS---TVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        75 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~---v~~~~~~~~~~~~E~~~~~  150 (327)
                      .++++|+||-+||...-...+.. +.+..|+...+.+...+.++. +...+|.+|-..   .|...        +.+.  
T Consensus       117 ~~kdaDIVVitAG~prkpg~tR~-dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~~--------k~sg--  185 (387)
T TIGR01757       117 VFEDADWALLIGAKPRGPGMERA-DLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIAM--------KNAP--  185 (387)
T ss_pred             HhCCCCEEEECCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHHH--------HHcC--
Confidence            57789999999997554444444 889999999999999999954 345677666421   01000        0000  


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                            ..+....=..+.+..-++-..++++.+++..-++-..|+|....
T Consensus       186 ------~~~~rviG~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGd  229 (387)
T TIGR01757       186 ------NIPRKNFHALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHST  229 (387)
T ss_pred             ------CCcccEEEecchhHHHHHHHHHHHHHCcChhHcceeEEEecCCC
Confidence                  00111222344455555566666777888877777778887644

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.85  E-value=0.00014  Score=65.52  Aligned_cols=176  Identities=12%  Similarity=0.023  Sum_probs=102.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHC---C--Ce--EEEEEcCCC-CCc-chhhhhhCCC-CCCCCeEEEeCCCCChhHHHHH
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDH---G--YF--VTTTVRSDP-EHK-KDLSFLTNLP-GASERLQIFNADLNDPESFDAA   75 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~---g--~~--V~~~~r~~~-~~~-~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~   75 (327)
                      -+|+||||+|+||.+|+-.+++-   |  -.  +..++.... +.. .....+.+.. ....++.....       ..+.
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~~-------~~ea  196 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTTD-------LDVA  196 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEEC-------CHHH
Confidence            57999999999999999999873   4  22  444444101 111 1111121110 00112333221       1356


Q ss_pred             hcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCC-ccEEEEeccceeeeecCCCCCcccCCCCCChhHh
Q 020334           76 IAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT-VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYI  154 (327)
Q Consensus        76 ~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~  154 (327)
                      ++++|+||-+||.......+.. +.++.|+...+.+.+++.++.. ..+++.+.|-=+    +..-...-...+      
T Consensus       197 ~~daDvvIitag~prk~G~~R~-DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPv----D~~t~i~~k~ap------  265 (452)
T cd05295         197 FKDAHVIVLLDDFLIKEGEDLE-GCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFL----NLKTSILIKYAP------  265 (452)
T ss_pred             hCCCCEEEECCCCCCCcCCCHH-HHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcH----HHHHHHHHHHcC------
Confidence            7889999999997554444444 8899999999999999999873 145555553110    000000000000      


Q ss_pred             hhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCC
Q 020334          155 RKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICP  201 (327)
Q Consensus       155 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~  201 (327)
                        .-++....|.+....-++....+++.+++..-++-..|+|.....
T Consensus       266 --giP~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~s  310 (452)
T cd05295         266 --SIPRKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGGN  310 (452)
T ss_pred             --CCCHHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCCc
Confidence              012244556666665566666777789988888888899986544

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.82  E-value=9.9e-05  Score=65.81  Aligned_cols=101  Identities=19%  Similarity=0.117  Sum_probs=67.1

Q ss_pred             CCeEEEeCC----------------cchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCC
Q 020334            5 KGKVCVTGG----------------TGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLND   68 (327)
Q Consensus         5 ~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d   68 (327)
                      +++||||||                ||.+|.++++.|..+|++|+.+.+......            ...+  ...|+.+
T Consensus       185 ~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~------------~~~~--~~~~v~~  250 (390)
T TIGR00521       185 GKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT------------PPGV--KSIKVST  250 (390)
T ss_pred             CceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC------------CCCc--EEEEecc
Confidence            689999998                467999999999999999999887332110            1222  3478888


Q ss_pred             hhHH-HHHh----cCCCEEEEccCCCCCCCCch----H---HHHHHHHHhHHHHHHHHHHhcC
Q 020334           69 PESF-DAAI----AGCAGVIHVAAPIDIDGKET----E---EVMTQRAVNGTIGILKSCLKSG  119 (327)
Q Consensus        69 ~~~~-~~~~----~~~d~vih~a~~~~~~~~~~----~---~~~~~~nv~~~~~l~~~~~~~~  119 (327)
                      .+++ +.++    .++|++|++||..++.....    .   .+.+..|+.-+-.++..+++..
T Consensus       251 ~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~  313 (390)
T TIGR00521       251 AEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK  313 (390)
T ss_pred             HHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence            7777 4444    36899999999876432110    0   0122345556667777776543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.81  E-value=0.00034  Score=61.43  Aligned_cols=109  Identities=17%  Similarity=0.215  Sum_probs=70.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCC--------------------cch-hhhhhCCCCCCCCeEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEH--------------------KKD-LSFLTNLPGASERLQIF   62 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------------------~~~-~~~~~~~~~~~~~~~~~   62 (327)
                      ..+|+|.|+ |.+|++++..|+..|. ++++++.+.-+.                    ... ...+.+. +..-.++.+
T Consensus        24 ~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~i-np~v~v~~~  101 (339)
T PRK07688         24 EKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEI-NSDVRVEAI  101 (339)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHH-CCCcEEEEE
Confidence            578999997 9999999999999997 889888842110                    000 0111111 111245566


Q ss_pred             eCCCCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeee
Q 020334           63 NADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVY  134 (327)
Q Consensus        63 ~~D~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~  134 (327)
                      ..+++ .+.+.++++++|+||.+...       .         ..-..+.++|.+.+  ..+|+.|+...+|
T Consensus       102 ~~~~~-~~~~~~~~~~~DlVid~~Dn-------~---------~~r~~ln~~~~~~~--iP~i~~~~~g~~G  154 (339)
T PRK07688        102 VQDVT-AEELEELVTGVDLIIDATDN-------F---------ETRFIVNDAAQKYG--IPWIYGACVGSYG  154 (339)
T ss_pred             eccCC-HHHHHHHHcCCCEEEEcCCC-------H---------HHHHHHHHHHHHhC--CCEEEEeeeeeee
Confidence            66764 45567788899999988531       1         11235667787776  5688888777665

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.79  E-value=0.00011  Score=67.57  Aligned_cols=78  Identities=22%  Similarity=0.153  Sum_probs=55.7

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIAGC   79 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~   79 (327)
                      |....++|+|+|+++ +|..+++.|++.|++|++.++....... ....+..     .+++++.+|..+     +...++
T Consensus         1 ~~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~-----~~~~~~   69 (450)
T PRK14106          1 MELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-----LGIELVLGEYPE-----EFLEGV   69 (450)
T ss_pred             CCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-----cCCEEEeCCcch-----hHhhcC
Confidence            544468999999877 9999999999999999999983212111 1122221     256788888876     235578


Q ss_pred             CEEEEccCCC
Q 020334           80 AGVIHVAAPI   89 (327)
Q Consensus        80 d~vih~a~~~   89 (327)
                      |+||++++..
T Consensus        70 d~vv~~~g~~   79 (450)
T PRK14106         70 DLVVVSPGVP   79 (450)
T ss_pred             CEEEECCCCC
Confidence            9999998863

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.79  E-value=0.0012  Score=57.68  Aligned_cols=116  Identities=15%  Similarity=0.092  Sum_probs=75.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcc--hhhhhhCCCCCCCCeEEEe-CCCCChhHHHHHhcCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKK--DLSFLTNLPGASERLQIFN-ADLNDPESFDAAIAGCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~-~D~~d~~~~~~~~~~~d   80 (327)
                      ++||.|+| +|.+|+.++..|+..|. +|..+++ +++...  .++............++.. .|      + +.++++|
T Consensus         6 ~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi-~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d------~-~~l~~aD   76 (321)
T PTZ00082          6 RRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDI-VKNIPQGKALDISHSNVIAGSNSKVIGTNN------Y-EDIAGSD   76 (321)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeC-CCchhhHHHHHHHhhhhccCCCeEEEECCC------H-HHhCCCC
Confidence            36899999 49999999999998885 8888998 443321  1111111000011222221 22      2 2467999


Q ss_pred             EEEEccCCCCCCCC----chHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           81 GVIHVAAPIDIDGK----ETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        81 ~vih~a~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      +||.+++.......    -...+.+..|+...+.+++.+.+..+...++.+|-
T Consensus        77 iVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         77 VVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             EEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99999986442222    02347788899999999999999874447777774

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.77  E-value=0.00066  Score=58.78  Aligned_cols=113  Identities=17%  Similarity=0.139  Sum_probs=74.9

Q ss_pred             EEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      |.|+|+ |.+|+.++..|+..|  .++..+++ +.+.. .....+.+........+....  .|    .+.+.++|+||.
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~-~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIi   72 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDV-NEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVI   72 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeC-CccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEE
Confidence            468896 899999999999988  68999999 43322 222222222111112222221  12    235778999999


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      +++.......+.. +.+..|+...+.+.+.++++++...++.+|.
T Consensus        73 tag~p~~~~~~R~-~l~~~n~~i~~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          73 TAGAPRKPGETRL-DLINRNAPILRSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             cCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            9987544334444 8889999999999999999875556666663

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.76  E-value=0.0003  Score=60.93  Aligned_cols=116  Identities=13%  Similarity=0.098  Sum_probs=73.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      +||.|+|+ |++|..++..|+..|+ +|+.+++ ...... ....+..... ....   ...+.-..++++ +.++|+||
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi-~~~l~~g~a~d~~~~~~-~~~~---~~~i~~t~d~~~-~~~aDiVI   74 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDV-VEGIPQGKALDMYEASP-VGGF---DTKVTGTNNYAD-TANSDIVV   74 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeC-CCChhHHHHHhhhhhhh-ccCC---CcEEEecCCHHH-hCCCCEEE
Confidence            57999996 9999999999999876 8999998 333222 1111111000 0000   011111112333 57899999


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      -+++.......... +.+..|+.....+++.+.+..+...+|.+|.
T Consensus        75 itag~p~~~~~sR~-~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        75 ITAGLPRKPGMSRE-DLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             EcCCCCCCcCCCHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99986443333333 7889999999999999998864556776664

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.76  E-value=6.7e-05  Score=63.51  Aligned_cols=80  Identities=18%  Similarity=0.204  Sum_probs=60.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      ..++|-|||||.|.-++++|...|.+-....| +..+...+....       +-++-..++.++..+++.+.+.++|+||
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgR-s~~kl~~l~~~L-------G~~~~~~p~~~p~~~~~~~~~~~VVlnc   78 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGR-SSAKLDALRASL-------GPEAAVFPLGVPAALEAMASRTQVVLNC   78 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccC-CHHHHHHHHHhc-------CccccccCCCCHHHHHHHHhcceEEEec
Confidence            46899999999999999999999998877788 544433333221       2233445555689999999999999999


Q ss_pred             cCCCCCCC
Q 020334           86 AAPIDIDG   93 (327)
Q Consensus        86 a~~~~~~~   93 (327)
                      +|++....
T Consensus        79 vGPyt~~g   86 (382)
T COG3268          79 VGPYTRYG   86 (382)
T ss_pred             cccccccc
Confidence            99987443

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.76  E-value=9.8e-05  Score=61.00  Aligned_cols=74  Identities=20%  Similarity=0.316  Sum_probs=58.1

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVIH   84 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vih   84 (327)
                      |+++|.|+ |-+|+.+++.|.+.|++|+++++ +++......  ..    ......+.+|-+|++.++++ +.++|+++-
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~-d~~~~~~~~--~~----~~~~~~v~gd~t~~~~L~~agi~~aD~vva   72 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDR-DEERVEEFL--AD----ELDTHVVIGDATDEDVLEEAGIDDADAVVA   72 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEc-CHHHHHHHh--hh----hcceEEEEecCCCHHHHHhcCCCcCCEEEE
Confidence            56889885 99999999999999999999999 543333211  00    13568889999999999887 678999986


Q ss_pred             ccC
Q 020334           85 VAA   87 (327)
Q Consensus        85 ~a~   87 (327)
                      +.+
T Consensus        73 ~t~   75 (225)
T COG0569          73 ATG   75 (225)
T ss_pred             eeC
Confidence            655

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.74  E-value=0.00023  Score=62.74  Aligned_cols=102  Identities=20%  Similarity=0.222  Sum_probs=60.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEE-eCCCCChhHHHHHhcCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIF-NADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~d~   81 (327)
                      ||++|+|+||||++|..+++.|.+. ++++.++.+ .......+....      +.+..+ ..+..+.+..  .+.++|+
T Consensus         1 ~m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~-~~~~g~~l~~~~------~~~~~~~~~~~~~~~~~--~~~~vD~   71 (343)
T PRK00436          1 MMIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTS-RSSAGKPLSDVH------PHLRGLVDLVLEPLDPE--ILAGADV   71 (343)
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHcCCCceEEEEEC-ccccCcchHHhC------cccccccCceeecCCHH--HhcCCCE
Confidence            4579999999999999999999986 678877766 222221121110      111111 1223333222  3467999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceee
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTV  133 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~  133 (327)
                      |+-|...          .       ....++..+.+.+  +++|=.|+..-+
T Consensus        72 Vf~alP~----------~-------~~~~~v~~a~~aG--~~VID~S~~fR~  104 (343)
T PRK00436         72 VFLALPH----------G-------VSMDLAPQLLEAG--VKVIDLSADFRL  104 (343)
T ss_pred             EEECCCc----------H-------HHHHHHHHHHhCC--CEEEECCcccCC
Confidence            9876642          1       1245555555555  688888876544

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.74  E-value=0.00016  Score=71.64  Aligned_cols=76  Identities=17%  Similarity=0.092  Sum_probs=57.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CCe-------------EEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChh
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GYF-------------VTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPE   70 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~   70 (327)
                      +++|+|+|| |++|+.+++.|++. +++             |.+.++ +......+.   ..   .++++.+..|+.|.+
T Consensus       569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~-~~~~a~~la---~~---~~~~~~v~lDv~D~e  640 (1042)
T PLN02819        569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASL-YLKDAKETV---EG---IENAEAVQLDVSDSE  640 (1042)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECC-CHHHHHHHH---Hh---cCCCceEEeecCCHH
Confidence            679999996 99999999999875 333             666666 433332221   11   136788999999999


Q ss_pred             HHHHHhcCCCEEEEccCC
Q 020334           71 SFDAAIAGCAGVIHVAAP   88 (327)
Q Consensus        71 ~~~~~~~~~d~vih~a~~   88 (327)
                      ++.++++++|+||.|...
T Consensus       641 ~L~~~v~~~DaVIsalP~  658 (1042)
T PLN02819        641 SLLKYVSQVDVVISLLPA  658 (1042)
T ss_pred             HHHHhhcCCCEEEECCCc
Confidence            999998999999999864

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.72  E-value=0.00035  Score=61.47  Aligned_cols=94  Identities=18%  Similarity=0.174  Sum_probs=57.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC---eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY---FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      |++|+|.||||++|..|++.|.+++|   ++.++.+. ......+. +       .+......|+.+.     .+.++|+
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~-~~~g~~l~-~-------~g~~i~v~d~~~~-----~~~~vDv   66 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASA-RSAGKELS-F-------KGKELKVEDLTTF-----DFSGVDI   66 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEcc-ccCCCeee-e-------CCceeEEeeCCHH-----HHcCCCE
Confidence            46899999999999999999999776   45777763 22222121 1       1223444455432     2357999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS  131 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~  131 (327)
                      ||.+++..                 .+..+...+.+.+  ..+|=.||..
T Consensus        67 Vf~A~g~g-----------------~s~~~~~~~~~~G--~~VIDlS~~~   97 (334)
T PRK14874         67 ALFSAGGS-----------------VSKKYAPKAAAAG--AVVIDNSSAF   97 (334)
T ss_pred             EEECCChH-----------------HHHHHHHHHHhCC--CEEEECCchh
Confidence            99887521                 1234445555555  3666667643

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.70  E-value=0.00054  Score=60.18  Aligned_cols=109  Identities=15%  Similarity=0.163  Sum_probs=69.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCc-----------------chh----hhhhCCCCCCCCeEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHK-----------------KDL----SFLTNLPGASERLQIF   62 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-----------------~~~----~~~~~~~~~~~~~~~~   62 (327)
                      .++|+|+|+ |-+|+++++.|+..|. ++++++++.-+..                 .+.    ..+... +..-.++.+
T Consensus        24 ~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~i-np~v~i~~~  101 (338)
T PRK12475         24 EKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKI-NSEVEIVPV  101 (338)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHH-CCCcEEEEE
Confidence            578999996 7799999999999997 7888888431100                 000    111111 112345667


Q ss_pred             eCCCCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeee
Q 020334           63 NADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVY  134 (327)
Q Consensus        63 ~~D~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~  134 (327)
                      ..|++ .+.+.++++++|+||.+...       .. .        -..+-+.|++.+  ..+|+.+..+.+|
T Consensus       102 ~~~~~-~~~~~~~~~~~DlVid~~D~-------~~-~--------r~~in~~~~~~~--ip~i~~~~~g~~G  154 (338)
T PRK12475        102 VTDVT-VEELEELVKEVDLIIDATDN-------FD-T--------RLLINDLSQKYN--IPWIYGGCVGSYG  154 (338)
T ss_pred             eccCC-HHHHHHHhcCCCEEEEcCCC-------HH-H--------HHHHHHHHHHcC--CCEEEEEecccEE
Confidence            77775 45678888999999988631       11 1        123456677766  5678877665554

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.63  E-value=0.0004  Score=60.81  Aligned_cols=98  Identities=14%  Similarity=0.204  Sum_probs=56.2

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCe---EEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYF---VTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      |+. |++|+|+||||++|..|++.|.+++|.   +..+.. .......+.    .    .+   ...++.+.+.. + ++
T Consensus         1 m~~-~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s-~~~aG~~l~----~----~~---~~l~~~~~~~~-~-~~   65 (336)
T PRK05671          1 MSQ-PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLAS-SESAGHSVP----F----AG---KNLRVREVDSF-D-FS   65 (336)
T ss_pred             CCC-CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEEC-cccCCCeec----c----CC---cceEEeeCChH-H-hc
Confidence            664 478999999999999999999987654   333322 211111111    0    11   11233222222 2 46


Q ss_pred             CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecccee
Q 020334           78 GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGST  132 (327)
Q Consensus        78 ~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v  132 (327)
                      ++|+|+-+...          ..       ...++..+.+.+  .++|=.|+..-
T Consensus        66 ~vD~vFla~p~----------~~-------s~~~v~~~~~~G--~~VIDlS~~fR  101 (336)
T PRK05671         66 QVQLAFFAAGA----------AV-------SRSFAEKARAAG--CSVIDLSGALP  101 (336)
T ss_pred             CCCEEEEcCCH----------HH-------HHHHHHHHHHCC--CeEEECchhhc
Confidence            89999876641          10       234666666666  46777777653

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.55  E-value=0.017  Score=44.05  Aligned_cols=188  Identities=16%  Similarity=0.164  Sum_probs=98.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChh---HH----HHHhc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPE---SF----DAAIA   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~----~~~~~   77 (327)
                      ..+|+|-||-|-+|++.++++.+++|-|.-++....+..+             .-..+.+|-+=.+   ++    .+.+.
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad-------------~sI~V~~~~swtEQe~~v~~~vg~sL~   69 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQAD-------------SSILVDGNKSWTEQEQSVLEQVGSSLQ   69 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccccc-------------ceEEecCCcchhHHHHHHHHHHHHhhc
Confidence            5789999999999999999999999998888773333221             1122333332222   22    22232


Q ss_pred             --CCCEEEEccCCCCCCCCchHH------HHHHHHHhHHHHHHH-HHHhcCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 --GCAGVIHVAAPIDIDGKETEE------VMTQRAVNGTIGILK-SCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 --~~d~vih~a~~~~~~~~~~~~------~~~~~nv~~~~~l~~-~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                        ++|.|+..||-..-.......      .++...+. +-.+.. .+..+-...-++.+..+...-.+          + 
T Consensus        70 gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvw-tSaIsa~lAt~HLK~GGLL~LtGAkaAl~g----------T-  137 (236)
T KOG4022|consen   70 GEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVW-TSAISAKLATTHLKPGGLLQLTGAKAALGG----------T-  137 (236)
T ss_pred             ccccceEEEeeccccCCCcchhhhhhchhhHHHHHHH-HHHHHHHHHHhccCCCceeeecccccccCC----------C-
Confidence              589999998754322111110      12222221 111111 11111112334444433322111          1 


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH-cCCcE----EEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE-HGLDL----VTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~----~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                +.--.||..|.+.-++++.++.+ .|+|-    ..+-|-..-.|..+...+.             ..+  
T Consensus       138 ----------PgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~-------------ADf--  192 (236)
T KOG4022|consen  138 ----------PGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPN-------------ADF--  192 (236)
T ss_pred             ----------CcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCC-------------Ccc--
Confidence                      22346999999999999998754 35543    3334444444432211111             011  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcC
Q 020334          224 LLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                         -+|....-+++.++.-...
T Consensus       193 ---ssWTPL~fi~e~flkWtt~  211 (236)
T KOG4022|consen  193 ---SSWTPLSFISEHFLKWTTE  211 (236)
T ss_pred             ---cCcccHHHHHHHHHHHhcc
Confidence               1677888888888776543

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.53  E-value=0.00088  Score=59.34  Aligned_cols=33  Identities=33%  Similarity=0.481  Sum_probs=28.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r   37 (327)
                      +++|+|+||||++|+.|++.|.+... ++.++.+
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~   36 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAA   36 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEc
Confidence            68999999999999999999998754 8888756

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.49  E-value=0.0014  Score=54.35  Aligned_cols=116  Identities=17%  Similarity=0.101  Sum_probs=77.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcC-CCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRS-DPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      +-||.|.||.|.||+.|...|..+.  -+....+.. .+.-...+.++..        ........-++.+++.++++|+
T Consensus        28 ~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T--------~s~V~g~~g~~~L~~al~~adv   99 (345)
T KOG1494|consen   28 GLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHINT--------NSSVVGFTGADGLENALKGADV   99 (345)
T ss_pred             cceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccccCC--------CCceeccCChhHHHHHhcCCCE
Confidence            4589999999999999998876542  233334442 1222222222211        1112233445679999999999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      ||--||...-..-..+ +.+.+|....+.|..++.+..+..++.++|-
T Consensus       100 VvIPAGVPRKPGMTRD-DLFn~NAgIv~~l~~aia~~cP~A~i~vIsN  146 (345)
T KOG1494|consen  100 VVIPAGVPRKPGMTRD-DLFNINAGIVKTLAAAIAKCCPNALILVISN  146 (345)
T ss_pred             EEecCCCCCCCCCcHH-HhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence            9999997654443444 8899999999999999998875556666663

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.47  E-value=0.00076  Score=59.60  Aligned_cols=101  Identities=18%  Similarity=0.176  Sum_probs=58.0

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHC-CCeEEEE-EcCCCCCcchhhhhhCCCCCCCCeEEE-eCCCCChhHHHHHhcCCCEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDH-GYFVTTT-VRSDPEHKKDLSFLTNLPGASERLQIF-NADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ++|.|+||||++|..+++.|.+. ++++..+ ++ .....+.+....      +.+... ..++.+ .+..++++++|+|
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s-~~sagk~~~~~~------~~l~~~~~~~~~~-~~~~~~~~~~DvV   72 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSS-RESAGKPVSEVH------PHLRGLVDLNLEP-IDEEEIAEDADVV   72 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEecc-chhcCCChHHhC------ccccccCCceeec-CCHHHhhcCCCEE
Confidence            47999999999999999999987 5787754 44 221111121111      111111 011211 1223344579999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceee
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTV  133 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~  133 (327)
                      +.|....                 ....++..+.+.+  +++|=.|+..-.
T Consensus        73 f~alP~~-----------------~s~~~~~~~~~~G--~~VIDlS~~fR~  104 (346)
T TIGR01850        73 FLALPHG-----------------VSAELAPELLAAG--VKVIDLSADFRL  104 (346)
T ss_pred             EECCCch-----------------HHHHHHHHHHhCC--CEEEeCChhhhc
Confidence            8776521                 1345566665555  788988886543

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.46  E-value=0.00054  Score=63.19  Aligned_cols=73  Identities=21%  Similarity=0.231  Sum_probs=57.7

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVIH   84 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vih   84 (327)
                      |+|+|+|+ |.+|.++++.|.+.|++|+++++ ++.....+.   .    ..+++.+.+|.++...+.++ +.++|.||-
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~-~~~~~~~~~---~----~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~   71 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDT-DEERLRRLQ---D----RLDVRTVVGNGSSPDVLREAGAEDADLLIA   71 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEEC-CHHHHHHHH---h----hcCEEEEEeCCCCHHHHHHcCCCcCCEEEE
Confidence            47999997 99999999999999999999999 443332221   1    13578899999999988887 778999887


Q ss_pred             ccC
Q 020334           85 VAA   87 (327)
Q Consensus        85 ~a~   87 (327)
                      +..
T Consensus        72 ~~~   74 (453)
T PRK09496         72 VTD   74 (453)
T ss_pred             ecC
Confidence            654

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.45  E-value=0.00041  Score=52.48  Aligned_cols=74  Identities=20%  Similarity=0.223  Sum_probs=51.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCe-EEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYF-VTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ..++++|.|+ |..|+.++.+|.+.|.+ |+++.| +.++...+.....    ...+.++..     +++.+.+.++|+|
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nR-t~~ra~~l~~~~~----~~~~~~~~~-----~~~~~~~~~~Div   79 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNR-TPERAEALAEEFG----GVNIEAIPL-----EDLEEALQEADIV   79 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEES-SHHHHHHHHHHHT----GCSEEEEEG-----GGHCHHHHTESEE
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEEC-CHHHHHHHHHHcC----ccccceeeH-----HHHHHHHhhCCeE
Confidence            4689999997 88999999999999976 999999 5544444433221    123444432     2344667789999


Q ss_pred             EEccCC
Q 020334           83 IHVAAP   88 (327)
Q Consensus        83 ih~a~~   88 (327)
                      |++.+.
T Consensus        80 I~aT~~   85 (135)
T PF01488_consen   80 INATPS   85 (135)
T ss_dssp             EE-SST
T ss_pred             EEecCC
Confidence            999764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.41  E-value=0.0022  Score=52.11  Aligned_cols=109  Identities=14%  Similarity=0.146  Sum_probs=66.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcch-------------------hhhhhCCCCCCCCeEEEeC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKD-------------------LSFLTNLPGASERLQIFNA   64 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~   64 (327)
                      ..+|+|.| .|.+|+++++.|+..|. ++++++.+.-+....                   ...+... +..-+++.+..
T Consensus        21 ~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~v~i~~~~~   98 (202)
T TIGR02356        21 NSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLREL-NSDIQVTALKE   98 (202)
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHh-CCCCEEEEehh
Confidence            56899999 59999999999999996 788888842111000                   0111111 00122333444


Q ss_pred             CCCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeee
Q 020334           65 DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVY  134 (327)
Q Consensus        65 D~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~  134 (327)
                      .+ +.+.+.++++++|+||.+...       ..         .-..+.+.|++.+  +.+|+.++.+.+|
T Consensus        99 ~i-~~~~~~~~~~~~D~Vi~~~d~-------~~---------~r~~l~~~~~~~~--ip~i~~~~~g~~G  149 (202)
T TIGR02356        99 RV-TAENLELLINNVDLVLDCTDN-------FA---------TRYLINDACVALG--TPLISAAVVGFGG  149 (202)
T ss_pred             cC-CHHHHHHHHhCCCEEEECCCC-------HH---------HHHHHHHHHHHcC--CCEEEEEeccCeE
Confidence            44 345677788899999987642       11         1234567777776  5688877655544

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=97.39  E-value=0.0038  Score=53.96  Aligned_cols=167  Identities=17%  Similarity=0.099  Sum_probs=97.6

Q ss_pred             EeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchhhhhhCCCCC-CCCeEEEeCCCCChhHHHHHhcCCCEEEEcc
Q 020334           10 VTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGA-SERLQIFNADLNDPESFDAAIAGCAGVIHVA   86 (327)
Q Consensus        10 VtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vih~a   86 (327)
                      |+|+ |.||++++..|+..+  .++..+++...........+.+.... ..++++..   .+    .+.++++|+||-+|
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~----~~~~~daDivVita   72 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS---GD----YSDCKDADLVVITA   72 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec---CC----HHHHCCCCEEEECC
Confidence            4574 999999999998876  37888988333222222223221110 11233322   22    24577899999999


Q ss_pred             CCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHh
Q 020334           87 APIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVL  166 (327)
Q Consensus        87 ~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~  166 (327)
                      |.......+.. +.+..|+...+.+.+.++++++...++.+|...-.-    .........          -++....|.
T Consensus        73 g~~rk~g~~R~-dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~----t~~~~~~sg----------~p~~~viG~  137 (299)
T TIGR01771        73 GAPQKPGETRL-ELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVDIL----TYVAWKLSG----------FPKNRVIGS  137 (299)
T ss_pred             CCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHHHH----HHHHHHHhC----------CCHHHEEec
Confidence            97543334444 889999999999999999987556677666321000    000000000          011122344


Q ss_pred             -hhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          167 -TKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       167 -sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                       +....-++....+++.+++..-++.. |+|....
T Consensus       138 gt~LDs~R~~~~la~~l~v~~~~V~~~-v~GeHG~  171 (299)
T TIGR01771       138 GTVLDTARLRYLLAEKLGVDPQSVHAY-IIGEHGD  171 (299)
T ss_pred             cchHHHHHHHHHHHHHhCcCcCeEEEE-EEecCCC
Confidence             33444555556666678888888754 8998643

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.36  E-value=0.0044  Score=50.17  Aligned_cols=110  Identities=17%  Similarity=0.183  Sum_probs=67.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCC--cch----------h---------hhhhCCCCCCCCeEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEH--KKD----------L---------SFLTNLPGASERLQIF   62 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--~~~----------~---------~~~~~~~~~~~~~~~~   62 (327)
                      ..+|+|.|++| +|+++++.|+..|. ++++++.+.-+.  ..+          .         ..+.+. +..-+++.+
T Consensus        19 ~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~l-Np~v~i~~~   96 (198)
T cd01485          19 SAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQEL-NPNVKLSIV   96 (198)
T ss_pred             hCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHH-CCCCEEEEE
Confidence            56899999866 99999999999995 588887742211  000          0         001111 111245555


Q ss_pred             eCCCCC-hhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeee
Q 020334           63 NADLND-PESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVY  134 (327)
Q Consensus        63 ~~D~~d-~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~  134 (327)
                      ..++.+ .+...+++.++|+||.+...        .        .....+-+.|++.+  ..+|+.++.+.+|
T Consensus        97 ~~~~~~~~~~~~~~~~~~dvVi~~~d~--------~--------~~~~~ln~~c~~~~--ip~i~~~~~G~~G  151 (198)
T cd01485          97 EEDSLSNDSNIEEYLQKFTLVIATEEN--------Y--------ERTAKVNDVCRKHH--IPFISCATYGLIG  151 (198)
T ss_pred             ecccccchhhHHHHHhCCCEEEECCCC--------H--------HHHHHHHHHHHHcC--CCEEEEEeecCEE
Confidence            555542 34456678889999966431        1        11234567788877  5788888876665

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.35  E-value=0.00053  Score=54.81  Aligned_cols=68  Identities=24%  Similarity=0.149  Sum_probs=44.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      ||+|.|. |+|.||+.|++.|.+.||+|++..|+.++..........     +.        ....+...+.+.+|+||-
T Consensus         1 m~~~~i~-GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~-----~~--------i~~~~~~dA~~~aDVVvL   66 (211)
T COG2085           1 MMIIAII-GTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALG-----PL--------ITGGSNEDAAALADVVVL   66 (211)
T ss_pred             CcEEEEe-ccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhc-----cc--------cccCChHHHHhcCCEEEE
Confidence            3556664 589999999999999999999997856654433322111     11        111223455667899985


Q ss_pred             cc
Q 020334           85 VA   86 (327)
Q Consensus        85 ~a   86 (327)
                      ..
T Consensus        67 AV   68 (211)
T COG2085          67 AV   68 (211)
T ss_pred             ec
Confidence            43

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.35  E-value=0.005  Score=46.52  Aligned_cols=109  Identities=16%  Similarity=0.174  Sum_probs=68.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhh-------------------hhCCCCCCCCeEEEeC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSF-------------------LTNLPGASERLQIFNA   64 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~   64 (327)
                      .++|+|.|+ |-+|+.+++.|+..|. ++++++.+.-+......+                   +... ...-+++.+..
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~-np~~~v~~~~~   79 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEI-NPDVEVEAIPE   79 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHH-STTSEEEEEES
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHh-cCceeeeeeec
Confidence            468999995 9999999999999997 688888742211111010                   0000 11234566666


Q ss_pred             CCCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeee
Q 020334           65 DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVY  134 (327)
Q Consensus        65 D~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~  134 (327)
                      ++ +.+...++++++|+||.|...       .         ..-..+.+.|++.+  +.+|+.++...+|
T Consensus        80 ~~-~~~~~~~~~~~~d~vi~~~d~-------~---------~~~~~l~~~~~~~~--~p~i~~~~~g~~G  130 (135)
T PF00899_consen   80 KI-DEENIEELLKDYDIVIDCVDS-------L---------AARLLLNEICREYG--IPFIDAGVNGFYG  130 (135)
T ss_dssp             HC-SHHHHHHHHHTSSEEEEESSS-------H---------HHHHHHHHHHHHTT---EEEEEEEETTEE
T ss_pred             cc-ccccccccccCCCEEEEecCC-------H---------HHHHHHHHHHHHcC--CCEEEEEeecCEE
Confidence            66 556677888899999988642       1         11245667888877  5788877655443

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.34  E-value=0.00056  Score=59.57  Aligned_cols=34  Identities=29%  Similarity=0.400  Sum_probs=30.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDP   40 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (327)
                      +++|.|+| +|.+|+.++..|++.|++|++.+| ++
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~-~~   35 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDA-DP   35 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeC-CH
Confidence            35799999 699999999999999999999999 44

>PRK04148 hypothetical protein; Provisional

Probab=97.34  E-value=0.0027  Score=47.32  Aligned_cols=92  Identities=17%  Similarity=0.157  Sum_probs=64.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      .++|+++|. | -|.++++.|.+.|++|++++. ++.......   .     ..++.+.+|+.++..  ++-+++|.|+-
T Consensus        17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi-~~~aV~~a~---~-----~~~~~v~dDlf~p~~--~~y~~a~liys   83 (134)
T PRK04148         17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDI-NEKAVEKAK---K-----LGLNAFVDDLFNPNL--EIYKNAKLIYS   83 (134)
T ss_pred             CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEEC-CHHHHHHHH---H-----hCCeEEECcCCCCCH--HHHhcCCEEEE
Confidence            467999994 7 899999999999999999999 544322222   1     357899999998762  34557888875


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEE
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY  126 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~  126 (327)
                      +=-+        . +.       ...+++.+++.+ +.-+|.
T Consensus        84 irpp--------~-el-------~~~~~~la~~~~-~~~~i~  108 (134)
T PRK04148         84 IRPP--------R-DL-------QPFILELAKKIN-VPLIIK  108 (134)
T ss_pred             eCCC--------H-HH-------HHHHHHHHHHcC-CCEEEE
Confidence            4321        1 32       467888888887 554443

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.34  E-value=0.0027  Score=53.73  Aligned_cols=68  Identities=18%  Similarity=0.149  Sum_probs=44.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      +++|.|+|++|.+|+.+++.+.+. +.++.++...++......               -..++....++.+++.++|+||
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~---------------~~~~i~~~~dl~~ll~~~DvVi   65 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ---------------GALGVAITDDLEAVLADADVLI   65 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc---------------CCCCccccCCHHHhccCCCEEE
Confidence            368999999999999999998864 688777554244322111               0122222334555666789988


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      ++..
T Consensus        66 d~t~   69 (257)
T PRK00048         66 DFTT   69 (257)
T ss_pred             ECCC
Confidence            8874

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.30  E-value=0.0044  Score=46.05  Aligned_cols=87  Identities=21%  Similarity=0.328  Sum_probs=52.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHH-CCCeEEE-EEcCCCC--CcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLD-HGYFVTT-TVRSDPE--HKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~-~g~~V~~-~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      +||.|.|++|-+|+.+++.+.+ .++++.+ ++| .+.  .......+....  ..++.       -..++++++..+|+
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~-~~~~~~g~d~g~~~~~~--~~~~~-------v~~~l~~~~~~~DV   70 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDR-KPSAKVGKDVGELAGIG--PLGVP-------VTDDLEELLEEADV   70 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEET-TTSTTTTSBCHHHCTSS--T-SSB-------EBS-HHHHTTH-SE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEec-CCcccccchhhhhhCcC--Ccccc-------cchhHHHhcccCCE
Confidence            4799999999999999999998 5788655 555 331  112222222111  01111       11456777777999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcC
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG  119 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~  119 (327)
                      ||.+..+          +       .+...++.+.+++
T Consensus        71 vIDfT~p----------~-------~~~~~~~~~~~~g   91 (124)
T PF01113_consen   71 VIDFTNP----------D-------AVYDNLEYALKHG   91 (124)
T ss_dssp             EEEES-H----------H-------HHHHHHHHHHHHT
T ss_pred             EEEcCCh----------H-------HhHHHHHHHHhCC
Confidence            9988632          1       2456777777777

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=97.29  E-value=0.0057  Score=53.09  Aligned_cols=112  Identities=13%  Similarity=0.091  Sum_probs=70.7

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhh-hhhCCCC-CCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLS-FLTNLPG-ASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      |.|+|+ |.+|..++..|+.+|. +|+.+++ +++...... .+..... .....++.. . .|   ++ .++++|+||.
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di-~e~~~~g~~~dl~~~~~~~~~~~~I~~-t-~d---~~-~l~dADiVIi   72 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDI-VEGLPQGKALDISQAAPILGSDTKVTG-T-ND---YE-DIAGSDVVVI   72 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeC-CCcHHHHHHHHHHHhhhhcCCCeEEEE-c-CC---HH-HhCCCCEEEE
Confidence            568998 9999999999998876 9999999 443322111 1111100 001112211 0 12   22 3688999999


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      +++.......... +....|+...+.+++.+.+..+...+|.+|
T Consensus        73 t~g~p~~~~~~r~-e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          73 TAGIPRKPGMSRD-DLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             ecCCCCCcCCCHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9986543333333 677889999999999999887445556555

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.28  E-value=0.0019  Score=56.92  Aligned_cols=67  Identities=13%  Similarity=0.249  Sum_probs=43.3

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEE---EEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVT---TTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      +|+|.||||++|..|++.|.+++|.+.   .+.+ .......+. +       .+......|+. .    ..+.++|+||
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as-~~~~g~~~~-~-------~~~~~~~~~~~-~----~~~~~~D~v~   66 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLAS-DRSAGRKVT-F-------KGKELEVNEAK-I----ESFEGIDIAL   66 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEec-cccCCCeee-e-------CCeeEEEEeCC-h----HHhcCCCEEE
Confidence            589999999999999999999887644   3335 221211111 0       12345555553 1    2346899999


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      .+++
T Consensus        67 ~a~g   70 (339)
T TIGR01296        67 FSAG   70 (339)
T ss_pred             ECCC
Confidence            8887

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.26  E-value=0.007  Score=50.61  Aligned_cols=93  Identities=15%  Similarity=0.149  Sum_probs=69.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~   81 (327)
                      ||++|||.|||+ =|+.|++.|.+.|+.|++..- .....  ..        ...+..+.|-+.|.+.+.+++.  +++.
T Consensus         1 ~~~~IlvlgGT~-egr~la~~L~~~g~~v~~Sva-t~~g~--~~--------~~~~~v~~G~l~~~~~l~~~l~~~~i~~   68 (248)
T PRK08057          1 MMPRILLLGGTS-EARALARALAAAGVDIVLSLA-GRTGG--PA--------DLPGPVRVGGFGGAEGLAAYLREEGIDL   68 (248)
T ss_pred             CCceEEEEechH-HHHHHHHHHHhCCCeEEEEEc-cCCCC--cc--------cCCceEEECCCCCHHHHHHHHHHCCCCE
Confidence            467899999986 599999999999998887666 22111  11        1356778888889999999986  7999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccE
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKR  123 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~  123 (327)
                      ||...-++.              ...+.++.++|++.+ +.-
T Consensus        69 VIDATHPfA--------------~~is~~a~~ac~~~~-ipy   95 (248)
T PRK08057         69 VIDATHPYA--------------AQISANAAAACRALG-IPY   95 (248)
T ss_pred             EEECCCccH--------------HHHHHHHHHHHHHhC-CcE
Confidence            998876543              223678889999887 553

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.18  E-value=0.0023  Score=55.10  Aligned_cols=231  Identities=15%  Similarity=0.068  Sum_probs=112.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhh-hCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFL-TNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      ||+||.|.||||+-|..|++.|.... .+++.++.+.. ..+.+... .+.    .+..-......|++.+  ..+++|+
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~-~g~~~~~~~p~l----~g~~~l~~~~~~~~~~--~~~~~Dv   73 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRER-AGKPVSDVHPNL----RGLVDLPFQTIDPEKI--ELDECDV   73 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhh-cCCchHHhCccc----ccccccccccCChhhh--hcccCCE
Confidence            46899999999999999999999884 56655544221 22222211 111    1111122222233322  3456899


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      ||-|.. .+.                ...++..+...+  .++|=+|...=.-...-...++.+.....+      -...
T Consensus        74 vFlalP-hg~----------------s~~~v~~l~~~g--~~VIDLSadfR~~d~~~ye~~Yg~~h~~~~------~l~~  128 (349)
T COG0002          74 VFLALP-HGV----------------SAELVPELLEAG--CKVIDLSADFRLKDPEVYEKWYGFTHAGPE------LLED  128 (349)
T ss_pred             EEEecC-chh----------------HHHHHHHHHhCC--CeEEECCcccccCCHHHHHHhhCCCCCCch------hhhc
Confidence            986643 111                233444444444  458888875433111112233333321100      0124


Q ss_pred             hhhHhhhHHHHHHHH-------------------HHHHHc----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc
Q 020334          162 KSYVLTKTLTERAAL-------------------EFAEEH----GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR  218 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~-------------------~~~~~~----~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~  218 (327)
                      +.||...+..|++-.                   =+.++.    ..++++---+.+-|.+............       .
T Consensus       129 avYGLpEl~~e~i~~A~lIAnPGCypTa~iLal~PL~~~~ll~~~~~~ivdakSG~SGaGrk~s~~~~~~e~-------~  201 (349)
T COG0002         129 AVYGLPELHREKIRGAKLIANPGCYPTAAILALAPLVKAGLLDPDSPPIVDAKSGVSGAGRKASVKNHFPEV-------N  201 (349)
T ss_pred             ccccCcccCHHHHhcCCEeeCCCchHHHHHHHHHHHHHcCCcCCCCceEEEEeEecCcCCCCccccccchhh-------c
Confidence            456666654444321                   111110    2233445555566665443222111110       0


Q ss_pred             cccccccCCCeeeHHHHHHHHHHhhcCC-----------CCCceE----EEeccccCHHHHHHHHHHhCC
Q 020334          219 EEYSILLNISMVHIDDVARAHIFLLEYP-----------DAKGRY----ICSSAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       219 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~-----------~~~~~y----~~~~~~~s~~e~~~~i~~~~~  273 (327)
                      ..+...+....-|..++...+-.+....           -..|+.    .-..+.+|..|+.+++.+.+.
T Consensus       202 ~~~~~Y~~~~HrH~pEi~q~l~~l~~~~~~v~FtPhl~p~~RGIl~Ti~~~l~~~~t~~~i~~~y~~~Y~  271 (349)
T COG0002         202 DSLRPYGLTGHRHTPEIEQHLGRLAGRKVPVIFTPHLGPFVRGILATIYLKLKDLVTLEELHAAYEEFYA  271 (349)
T ss_pred             cccccccccccCchHHHHHHhhhcccCcCceEEecccccccceEEEEEEEecCCCCCHHHHHHHHHHHhC
Confidence            1222222235678888887776444221           123432    223445899999999999776

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.18  E-value=0.0022  Score=50.29  Aligned_cols=56  Identities=21%  Similarity=0.194  Sum_probs=46.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..++|+|+|+++.+|..+++.|.++|.+|+++.| .                             .+.+.+.+.++|+||
T Consensus        43 ~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r-~-----------------------------~~~l~~~l~~aDiVI   92 (168)
T cd01080          43 AGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHS-K-----------------------------TKNLKEHTKQADIVI   92 (168)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEEC-C-----------------------------chhHHHHHhhCCEEE
Confidence            4689999999778899999999999999998888 2                             124566788899999


Q ss_pred             EccCCC
Q 020334           84 HVAAPI   89 (327)
Q Consensus        84 h~a~~~   89 (327)
                      .+.+..
T Consensus        93 sat~~~   98 (168)
T cd01080          93 VAVGKP   98 (168)
T ss_pred             EcCCCC
Confidence            888753

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=97.17  E-value=0.0021  Score=57.61  Aligned_cols=68  Identities=18%  Similarity=0.272  Sum_probs=52.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      |++|+|+|| |++|..+++.+.+.|++|++++.+........           --.++.+|..|.+.+.++++.+|+|..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~-----------ad~~~~~~~~D~~~l~~~a~~~dvit~   69 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV-----------ADEVIVADYDDVAALRELAEQCDVITY   69 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh-----------CceEEecCCCCHHHHHHHHhcCCEEEe
Confidence            468999997 89999999999999999999988322222111           125666899999999999999998753

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.15  E-value=0.0022  Score=46.96  Aligned_cols=70  Identities=30%  Similarity=0.462  Sum_probs=52.7

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEEEcc
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVIHVA   86 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vih~a   86 (327)
                      |+|.|. |-+|..+++.|.+.+.+|.++++ ++.....+.   .     .++.++.||.+|++.+.++ +++++.|+-+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~-d~~~~~~~~---~-----~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~   70 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDR-DPERVEELR---E-----EGVEVIYGDATDPEVLERAGIEKADAVVILT   70 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEES-SHHHHHHHH---H-----TTSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEEC-CcHHHHHHH---h-----cccccccccchhhhHHhhcCccccCEEEEcc
Confidence            678886 89999999999997779999999 543333222   1     3588999999999999874 46789888665


Q ss_pred             C
Q 020334           87 A   87 (327)
Q Consensus        87 ~   87 (327)
                      .
T Consensus        71 ~   71 (116)
T PF02254_consen   71 D   71 (116)
T ss_dssp             S
T ss_pred             C
Confidence            4

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.15  E-value=0.0028  Score=58.41  Aligned_cols=79  Identities=16%  Similarity=0.020  Sum_probs=52.3

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-CC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-GC   79 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~   79 (327)
                      |...+++|+|||++| +|.+.++.|++.|++|.+.+++..........+..     .++++..+...  ..   ++. ++
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~-----~g~~~~~~~~~--~~---~~~~~~   69 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE-----EGIKVICGSHP--LE---LLDEDF   69 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh-----cCCEEEeCCCC--HH---HhcCcC
Confidence            555578999999988 99999999999999999998733222222222322     24555544321  11   233 38


Q ss_pred             CEEEEccCCCC
Q 020334           80 AGVIHVAAPID   90 (327)
Q Consensus        80 d~vih~a~~~~   90 (327)
                      |.||...|...
T Consensus        70 d~vV~s~gi~~   80 (447)
T PRK02472         70 DLMVKNPGIPY   80 (447)
T ss_pred             CEEEECCCCCC
Confidence            99999988643

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.14  E-value=0.0053  Score=55.77  Aligned_cols=38  Identities=18%  Similarity=0.158  Sum_probs=33.1

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH   42 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   42 (327)
                      |.  +++|.|+| .|++|..++..|++.|++|+++++ ++..
T Consensus         1 m~--~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~-~~~~   38 (415)
T PRK11064          1 MS--FETISVIG-LGYIGLPTAAAFASRQKQVIGVDI-NQHA   38 (415)
T ss_pred             CC--ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeC-CHHH
Confidence            56  57899998 599999999999999999999999 5433

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=97.13  E-value=0.0041  Score=55.65  Aligned_cols=34  Identities=26%  Similarity=0.382  Sum_probs=31.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .+++|.|+||+|.+|..+++.|.+.|++|++.+|
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~  130 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQ  130 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCC
Confidence            3578999999999999999999999999999988

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.13  E-value=0.006  Score=53.71  Aligned_cols=28  Identities=25%  Similarity=0.378  Sum_probs=25.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCe
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYF   31 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~   31 (327)
                      +.++|.|.||||++|..|++.|.+++|.
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP   33 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFP   33 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCC
Confidence            4678999999999999999999997763

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=97.12  E-value=0.00027  Score=56.51  Aligned_cols=31  Identities=29%  Similarity=0.344  Sum_probs=26.3

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      |||.|.| .||+|..++..|++.|++|++++.
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~   31 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDI   31 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeC
Confidence            5799998 799999999999999999999999

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.11  E-value=0.007  Score=50.23  Aligned_cols=109  Identities=22%  Similarity=0.209  Sum_probs=66.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcch----------h---------hhhhCCCCCCCCeEEEeC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKD----------L---------SFLTNLPGASERLQIFNA   64 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~----------~---------~~~~~~~~~~~~~~~~~~   64 (327)
                      ..+|+|.| .|.+|+++++.|+..|. ++++++.+.-+....          +         +.+... +..-+++.+..
T Consensus        21 ~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~~~i~~~~~   98 (228)
T cd00757          21 NARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAI-NPDVEIEAYNE   98 (228)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHh-CCCCEEEEecc
Confidence            57899999 59999999999999986 566665532111000          0         011111 00123555555


Q ss_pred             CCCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeee
Q 020334           65 DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVY  134 (327)
Q Consensus        65 D~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~  134 (327)
                      ++ +.+.+.+++.++|+||.|....       .         .-..+.+.|++.+  ..+|+.+....+|
T Consensus        99 ~i-~~~~~~~~~~~~DvVi~~~d~~-------~---------~r~~l~~~~~~~~--ip~i~~g~~g~~g  149 (228)
T cd00757          99 RL-DAENAEELIAGYDLVLDCTDNF-------A---------TRYLINDACVKLG--KPLVSGAVLGFEG  149 (228)
T ss_pred             ee-CHHHHHHHHhCCCEEEEcCCCH-------H---------HHHHHHHHHHHcC--CCEEEEEeccCEE
Confidence            55 3456777888999999886521       1         1234667777776  5678877655443

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.09  E-value=0.01  Score=45.29  Aligned_cols=106  Identities=17%  Similarity=0.168  Sum_probs=64.6

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchh-------------------hhhhCCCCCCCCeEEEeCCC
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDL-------------------SFLTNLPGASERLQIFNADL   66 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~D~   66 (327)
                      +|+|.|+ |-+|+++++.|+..|. ++++++.+..+.....                   ..+.+. ...-+++.+..++
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~-~p~v~i~~~~~~~   78 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNEL-NPGVNVTAVPEGI   78 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHH-CCCcEEEEEeeec
Confidence            5899996 9999999999999997 6888876321110000                   011111 0012344455555


Q ss_pred             CChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceee
Q 020334           67 NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTV  133 (327)
Q Consensus        67 ~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~  133 (327)
                      .+. ...+.+.++|+||.|....                .....+.+.|++.+  ..++..++...+
T Consensus        79 ~~~-~~~~~~~~~diVi~~~d~~----------------~~~~~l~~~~~~~~--i~~i~~~~~g~~  126 (143)
T cd01483          79 SED-NLDDFLDGVDLVIDAIDNI----------------AVRRALNRACKELG--IPVIDAGGLGLG  126 (143)
T ss_pred             Chh-hHHHHhcCCCEEEECCCCH----------------HHHHHHHHHHHHcC--CCEEEEcCCCcE
Confidence            433 2356778899999887521                12356678888876  567877776543

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.07  E-value=0.0039  Score=52.95  Aligned_cols=100  Identities=18%  Similarity=0.209  Sum_probs=67.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..+.+.|+|+.| ||+--++...+-|++|+++++++..+.+.++.+        +.+.+..-..|++.++++.+..|.++
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L--------GAd~fv~~~~d~d~~~~~~~~~dg~~  251 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL--------GADVFVDSTEDPDIMKAIMKTTDGGI  251 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc--------CcceeEEecCCHHHHHHHHHhhcCcc
Confidence            367899999988 999888888888999999999544555544433        33333333337777777777678888


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      |++.....   .+           ...+++.+|..+   ++|+++=
T Consensus       252 ~~v~~~a~---~~-----------~~~~~~~lk~~G---t~V~vg~  280 (360)
T KOG0023|consen  252 DTVSNLAE---HA-----------LEPLLGLLKVNG---TLVLVGL  280 (360)
T ss_pred             eeeeeccc---cc-----------hHHHHHHhhcCC---EEEEEeC
Confidence            87763311   11           234566677655   7887774

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.04  E-value=0.0021  Score=59.30  Aligned_cols=75  Identities=28%  Similarity=0.415  Sum_probs=57.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi   83 (327)
                      +++|+|.|+ |.+|..+++.|.+.|++|+++++ +++....+...      ..++..+.||.++++.+.++ ++++|.||
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~-~~~~~~~~~~~------~~~~~~i~gd~~~~~~L~~~~~~~a~~vi  302 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIER-DPERAEELAEE------LPNTLVLHGDGTDQELLEEEGIDEADAFI  302 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEC-CHHHHHHHHHH------CCCCeEEECCCCCHHHHHhcCCccCCEEE
Confidence            578999997 99999999999999999999998 54433322211      13578899999999988654 46789888


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      -+..
T Consensus       303 ~~~~  306 (453)
T PRK09496        303 ALTN  306 (453)
T ss_pred             ECCC
Confidence            5543

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.00  E-value=0.014  Score=47.19  Aligned_cols=108  Identities=17%  Similarity=0.210  Sum_probs=64.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcc----------h---------hhhhhCCCCCCCCeEEEeC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKK----------D---------LSFLTNLPGASERLQIFNA   64 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----------~---------~~~~~~~~~~~~~~~~~~~   64 (327)
                      ..+|+|.|+.| +|+++++.|+..|. ++++++.+.-+...          .         .+.+.+. +..-+++.+..
T Consensus        21 ~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~l-Np~v~i~~~~~   98 (197)
T cd01492          21 SARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRAL-NPRVKVSVDTD   98 (197)
T ss_pred             hCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHH-CCCCEEEEEec
Confidence            57899999755 99999999999996 57777763221100          0         0011111 11123455555


Q ss_pred             CCCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeee
Q 020334           65 DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVY  134 (327)
Q Consensus        65 D~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~  134 (327)
                      .+.+  ...+.+.++|+||.+...       .         .....+-+.|++.+  ..+|+.++.+-+|
T Consensus        99 ~~~~--~~~~~~~~~dvVi~~~~~-------~---------~~~~~ln~~c~~~~--ip~i~~~~~G~~G  148 (197)
T cd01492          99 DISE--KPEEFFSQFDVVVATELS-------R---------AELVKINELCRKLG--VKFYATGVHGLFG  148 (197)
T ss_pred             Cccc--cHHHHHhCCCEEEECCCC-------H---------HHHHHHHHHHHHcC--CCEEEEEecCCEE
Confidence            5542  235567889999976431       1         11234557788877  4688888766665

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.99  E-value=0.0016  Score=51.79  Aligned_cols=69  Identities=22%  Similarity=0.147  Sum_probs=46.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..++|.|+| .|-||+.+++.|..-|.+|++.+| ..........        ..+        ...++++++.++|+|+
T Consensus        35 ~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~-~~~~~~~~~~--------~~~--------~~~~l~ell~~aDiv~   96 (178)
T PF02826_consen   35 RGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDR-SPKPEEGADE--------FGV--------EYVSLDELLAQADIVS   96 (178)
T ss_dssp             TTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEES-SCHHHHHHHH--------TTE--------EESSHHHHHHH-SEEE
T ss_pred             CCCEEEEEE-EcCCcCeEeeeeecCCceeEEecc-cCChhhhccc--------ccc--------eeeehhhhcchhhhhh
Confidence            468999999 599999999999999999999999 4322211110        111        1124667788899988


Q ss_pred             EccCCCC
Q 020334           84 HVAAPID   90 (327)
Q Consensus        84 h~a~~~~   90 (327)
                      .+.....
T Consensus        97 ~~~plt~  103 (178)
T PF02826_consen   97 LHLPLTP  103 (178)
T ss_dssp             E-SSSST
T ss_pred             hhhcccc
Confidence            8876544

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]

Probab=96.99  E-value=0.0028  Score=51.34  Aligned_cols=179  Identities=17%  Similarity=0.078  Sum_probs=97.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC---C--CeEEEEEcCCCCCcchhh----hhhCCCCCCCCeEEE-eCCCCChhHHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH---G--YFVTTTVRSDPEHKKDLS----FLTNLPGASERLQIF-NADLNDPESFDA   74 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~---g--~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~-~~D~~d~~~~~~   74 (327)
                      .-+||||||+|+||.+|+-.+++-   |  --++..-.+.+.....+.    ++..     .-+... ..+.++  +-..
T Consensus         4 pirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD-----~a~PlL~~Vvatt--d~~~   76 (332)
T KOG1496|consen    4 PIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQD-----CALPLLKGVVATT--DEVE   76 (332)
T ss_pred             ceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHh-----hhhhHHHhhhccc--Chhh
Confidence            358999999999999999988653   2  112222221111111111    1100     000000 011111  1234


Q ss_pred             HhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCCChhH
Q 020334           75 AIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDY  153 (327)
Q Consensus        75 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~  153 (327)
                      .|+++|+.|-..+......-+. .+.+..|+...+.=-.++.++. +..+++.++-.+     ..+.-...+..|.    
T Consensus        77 afkdv~~ailvGa~PR~eGMER-kDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPa-----NTNali~~k~Aps----  146 (332)
T KOG1496|consen   77 AFKDVDVAILVGAMPRREGMER-KDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPA-----NTNALILKKFAPS----  146 (332)
T ss_pred             hhccCcEEEEeccccCcccchh-hhHHhhcceeehhhhHHHHHhcCCCceEEEecCcc-----ccchhHHhhhCCC----
Confidence            5678899887777654333333 3788889877655555555442 123566444321     1111122333321    


Q ss_pred             hhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC
Q 020334          154 IRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA  204 (327)
Q Consensus       154 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~  204 (327)
                          -+..+....+++.-.+...+++.+.|+++.-+.--.|+|.......+
T Consensus       147 ----IP~kNfs~lTRLDhNRA~~QlA~klgv~~~~VkNviIWGNHSsTQyP  193 (332)
T KOG1496|consen  147 ----IPEKNFSALTRLDHNRALAQLALKLGVPVSDVKNVIIWGNHSSTQYP  193 (332)
T ss_pred             ----CchhcchhhhhhchhhHHHHHHHhhCCchhhcceeEEecccccccCC
Confidence                12245567777777788888888889999989888899987554433

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.97  E-value=0.0038  Score=54.19  Aligned_cols=67  Identities=19%  Similarity=0.290  Sum_probs=52.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      |++|.|+|| |++|+-++.+-..-|++|++++-..+.....+           .-..+..+..|++.+.++.+++|+|-
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~v-----------a~~~i~~~~dD~~al~ela~~~DViT   67 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQV-----------ADRVIVAAYDDPEALRELAAKCDVIT   67 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhhc-----------ccceeecCCCCHHHHHHHHhhCCEEE
Confidence            468999996 99999999999999999999987333333222           12566688889999999999999874

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.96  E-value=0.0035  Score=53.49  Aligned_cols=55  Identities=15%  Similarity=0.197  Sum_probs=44.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+++++|+|++|.+|+.++..|++.|.+|++..| .                             ...+.+.++++|+||
T Consensus       158 ~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~-~-----------------------------t~~L~~~~~~aDIvI  207 (283)
T PRK14192        158 AGKHAVVVGRSAILGKPMAMMLLNANATVTICHS-R-----------------------------TQNLPELVKQADIIV  207 (283)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC-C-----------------------------chhHHHHhccCCEEE
Confidence            4689999999999999999999999998888766 1                             122455567899999


Q ss_pred             EccCC
Q 020334           84 HVAAP   88 (327)
Q Consensus        84 h~a~~   88 (327)
                      ++.|.
T Consensus       208 ~AtG~  212 (283)
T PRK14192        208 GAVGK  212 (283)
T ss_pred             EccCC
Confidence            99863

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=96.95  E-value=0.003  Score=62.19  Aligned_cols=164  Identities=18%  Similarity=0.174  Sum_probs=102.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEE-EEcCCCCC---cchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTT-TVRSDPEH---KKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      .+..+|+||-|..|..|+.-|.++|.+-.+ ..|+.-..   ...+..+...   +-.+..-.-|++..+.-.+++.   
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~---GVqV~vsT~nitt~~ga~~Li~~s~ 1844 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR---GVQVQVSTSNITTAEGARGLIEESN 1844 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc---CeEEEEecccchhhhhHHHHHHHhh
Confidence            468999999999999999999999986544 44522221   1122222221   1123333466666555555654   


Q ss_pred             ---CCCEEEEccCCCC---CCCCc--hHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 ---GCAGVIHVAAPID---IDGKE--TEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 ---~~d~vih~a~~~~---~~~~~--~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                         -+-.|+|+|+...   ...+.  ..++..+.-..++.+|=...++.- ..+.||.+||.. .|-+            
T Consensus      1845 kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvs-cGRG------------ 1911 (2376)
T KOG1202|consen 1845 KLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVS-CGRG------------ 1911 (2376)
T ss_pred             hcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeec-ccCC------------
Confidence               2578999997543   11111  112344445677888877777764 267999999965 3322            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCce
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFV  194 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v  194 (327)
                               +...+.||.+...+|++|.+-. ..|+|-+.+.-|.|
T Consensus      1912 ---------N~GQtNYG~aNS~MERiceqRr-~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1912 ---------NAGQTNYGLANSAMERICEQRR-HEGFPGTAIQWGAI 1947 (2376)
T ss_pred             ---------CCcccccchhhHHHHHHHHHhh-hcCCCcceeeeecc
Confidence                     2335679999999999998753 35888777765543

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.91  E-value=0.0023  Score=49.61  Aligned_cols=74  Identities=18%  Similarity=0.071  Sum_probs=48.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .++|+|+|+ |.+|..+++.|.+.| ++|++.+| ++.....+....       +...+..+..+   ..+.++++|+||
T Consensus        19 ~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r-~~~~~~~~~~~~-------~~~~~~~~~~~---~~~~~~~~Dvvi   86 (155)
T cd01065          19 GKKVLILGA-GGAARAVAYALAELGAAKIVIVNR-TLEKAKALAERF-------GELGIAIAYLD---LEELLAEADLII   86 (155)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcC-CHHHHHHHHHHH-------hhcccceeecc---hhhccccCCEEE
Confidence            578999997 999999999999985 78999998 443332221111       11101123333   333467899999


Q ss_pred             EccCCCC
Q 020334           84 HVAAPID   90 (327)
Q Consensus        84 h~a~~~~   90 (327)
                      .+.....
T Consensus        87 ~~~~~~~   93 (155)
T cd01065          87 NTTPVGM   93 (155)
T ss_pred             eCcCCCC
Confidence            9986543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.89  E-value=0.0047  Score=54.18  Aligned_cols=117  Identities=18%  Similarity=0.119  Sum_probs=65.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCC-CCC-CCCeE-EE---eCC--CCChhHHHHHhc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNL-PGA-SERLQ-IF---NAD--LNDPESFDAAIA   77 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~-~~~~~-~~---~~D--~~d~~~~~~~~~   77 (327)
                      |||-|.| +||+|.-....|++.||+|++++. ++.+-   ..+... ... .++++ ++   ..+  +.-..+.++.++
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDi-d~~KV---~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~   75 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDI-DESKV---ELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVK   75 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeC-CHHHH---HHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHh
Confidence            5799999 799999999999999999999999 44332   222211 000 01110 00   011  222234566777


Q ss_pred             CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeee
Q 020334           78 GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVY  134 (327)
Q Consensus        78 ~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~  134 (327)
                      ..|+++-+.|.........+       +..+..+++.+.+.-+.+++|.+=|+-..|
T Consensus        76 ~adv~fIavgTP~~~dg~aD-------l~~V~ava~~i~~~~~~~~vvV~KSTVPvG  125 (414)
T COG1004          76 DADVVFIAVGTPPDEDGSAD-------LSYVEAVAKDIGEILDGKAVVVIKSTVPVG  125 (414)
T ss_pred             cCCEEEEEcCCCCCCCCCcc-------HHHHHHHHHHHHhhcCCCeEEEEcCCCCCC
Confidence            88999888875432222222       333455555555543233566555544443

>PRK08328 hypothetical protein; Provisional

Probab=96.89  E-value=0.017  Score=47.93  Aligned_cols=108  Identities=21%  Similarity=0.233  Sum_probs=66.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhh---------------------hhhCCCCCCCCeEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLS---------------------FLTNLPGASERLQIF   62 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~---------------------~~~~~~~~~~~~~~~   62 (327)
                      ..+|+|.|+ |.+|+++++.|+..|. ++++++.+..+ .+.+.                     .+... +..-.++.+
T Consensus        27 ~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve-~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~-np~v~v~~~  103 (231)
T PRK08328         27 KAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPE-LSNLNRQILHWEEDLGKNPKPLSAKWKLERF-NSDIKIETF  103 (231)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccC-hhhhccccccChhhcCchHHHHHHHHHHHHh-CCCCEEEEE
Confidence            568999995 9999999999999985 67777763211 10000                     01111 111234555


Q ss_pred             eCCCCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeee
Q 020334           63 NADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVY  134 (327)
Q Consensus        63 ~~D~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~  134 (327)
                      ...+ +.+.+.++++++|+||.|.-..         +       .-..+-++|++.+  ..+|+.++.+.+|
T Consensus       104 ~~~~-~~~~~~~~l~~~D~Vid~~d~~---------~-------~r~~l~~~~~~~~--ip~i~g~~~g~~G  156 (231)
T PRK08328        104 VGRL-SEENIDEVLKGVDVIVDCLDNF---------E-------TRYLLDDYAHKKG--IPLVHGAVEGTYG  156 (231)
T ss_pred             eccC-CHHHHHHHHhcCCEEEECCCCH---------H-------HHHHHHHHHHHcC--CCEEEEeeccCEE
Confidence            5555 4455677888999999886421         1       1123446677776  5688888776665

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.87  E-value=0.014  Score=52.30  Aligned_cols=108  Identities=17%  Similarity=0.207  Sum_probs=65.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCC------------------Ccch-hhhhhCCCCCCCCeEEEeC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPE------------------HKKD-LSFLTNLPGASERLQIFNA   64 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~------------------~~~~-~~~~~~~~~~~~~~~~~~~   64 (327)
                      .++|+|.|+ |.+|++++..|+..|. ++++++++.-+                  +... ...+.+. +..-+++.+..
T Consensus       135 ~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~v~v~~~~~  212 (376)
T PRK08762        135 EARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAAL-NPDVQVEAVQE  212 (376)
T ss_pred             cCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHH-CCCCEEEEEec
Confidence            568999985 8899999999999996 68888884111                  0010 1111111 00123344444


Q ss_pred             CCCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceee
Q 020334           65 DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTV  133 (327)
Q Consensus        65 D~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~  133 (327)
                      .+. .+.+.++++++|+||+|....       .         .-..+.+.|++.+  ..+|+.+....+
T Consensus       213 ~~~-~~~~~~~~~~~D~Vv~~~d~~-------~---------~r~~ln~~~~~~~--ip~i~~~~~g~~  262 (376)
T PRK08762        213 RVT-SDNVEALLQDVDVVVDGADNF-------P---------TRYLLNDACVKLG--KPLVYGAVFRFE  262 (376)
T ss_pred             cCC-hHHHHHHHhCCCEEEECCCCH-------H---------HHHHHHHHHHHcC--CCEEEEEeccCE
Confidence            443 345677788999999886521       1         1123567777776  578888765433

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.84  E-value=0.014  Score=47.74  Aligned_cols=108  Identities=19%  Similarity=0.274  Sum_probs=63.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCC--Ccc------------h----hhhhhCCCCCCCCeEEEeCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPE--HKK------------D----LSFLTNLPGASERLQIFNAD   65 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~--~~~------------~----~~~~~~~~~~~~~~~~~~~D   65 (327)
                      ..+|+|.|+ |.+|+++++.|+..|. ++++++.+.-+  +..            +    ...+... +..-+++.+...
T Consensus        28 ~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~l-np~v~v~~~~~~  105 (212)
T PRK08644         28 KAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEI-NPFVEIEAHNEK  105 (212)
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHH-CCCCEEEEEeee
Confidence            568999995 9999999999999986 58888874211  100            0    0011111 111234455555


Q ss_pred             CCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhc-CCccEEEEeccceee
Q 020334           66 LNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKS-GTVKRFVYTSSGSTV  133 (327)
Q Consensus        66 ~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~v~  133 (327)
                      +.+ +.+.++++++|+||.|.-       +..         .-..+.+.|.+. +  ..+|+.+...-|
T Consensus       106 i~~-~~~~~~~~~~DvVI~a~D-------~~~---------~r~~l~~~~~~~~~--~p~I~~~~~~~~  155 (212)
T PRK08644        106 IDE-DNIEELFKDCDIVVEAFD-------NAE---------TKAMLVETVLEHPG--KKLVAASGMAGY  155 (212)
T ss_pred             cCH-HHHHHHHcCCCEEEECCC-------CHH---------HHHHHHHHHHHhCC--CCEEEeehhhcc
Confidence            543 456677889999998842       111         123455666666 5  567776654434

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.82  E-value=0.0011  Score=52.03  Aligned_cols=66  Identities=27%  Similarity=0.284  Sum_probs=43.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      |++|.++| .|-+|+.+++.|++.|++|++.+| ++++...+..        .+++.       .++..++++++|+|+-
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~-~~~~~~~~~~--------~g~~~-------~~s~~e~~~~~dvvi~   63 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDR-SPEKAEALAE--------AGAEV-------ADSPAEAAEQADVVIL   63 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEES-SHHHHHHHHH--------TTEEE-------ESSHHHHHHHBSEEEE
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeecc-chhhhhhhHH--------hhhhh-------hhhhhhHhhcccceEe
Confidence            57899999 599999999999999999999999 4433333221        12221       1234455666788887


Q ss_pred             ccC
Q 020334           85 VAA   87 (327)
Q Consensus        85 ~a~   87 (327)
                      |..
T Consensus        64 ~v~   66 (163)
T PF03446_consen   64 CVP   66 (163)
T ss_dssp             -SS
T ss_pred             ecc
Confidence            754

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.82  E-value=0.0055  Score=55.69  Aligned_cols=33  Identities=36%  Similarity=0.366  Sum_probs=29.8

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDP   40 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (327)
                      |+|.|+| .|++|..++..|++.|++|++.++ ++
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~-~~   33 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDI-DQ   33 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEEC-CH
Confidence            3699998 699999999999999999999999 44

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.81  E-value=0.011  Score=51.73  Aligned_cols=33  Identities=30%  Similarity=0.252  Sum_probs=31.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      ..+++|+||+|.+|..+++.+...|.+|+++++
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~  195 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTR  195 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeC
Confidence            568999999999999999999999999999988

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK06849 hypothetical protein; Provisional

Probab=96.79  E-value=0.0079  Score=54.30  Aligned_cols=36  Identities=22%  Similarity=0.130  Sum_probs=33.0

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      |+ .+|+|||||+...+|.++++.|.+.|++|++++.
T Consensus         1 ~~-~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~   36 (389)
T PRK06849          1 MN-TKKTVLITGARAPAALELARLFHNAGHTVILADS   36 (389)
T ss_pred             CC-CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            44 4689999999999999999999999999999988

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.74  E-value=0.018  Score=50.84  Aligned_cols=32  Identities=28%  Similarity=0.475  Sum_probs=27.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVR   37 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r   37 (327)
                      ++|.|+||||++|++|++.|.+.+ .+|..+..
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~   33 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVA   33 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEE
Confidence            479999999999999999998876 58887754

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.73  E-value=0.0051  Score=52.81  Aligned_cols=69  Identities=20%  Similarity=0.162  Sum_probs=48.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..++++|+|+ |.+|+.+++.|...|.+|++.+| ++.....   ...     .+...+     ..+.+.+.+.++|+||
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R-~~~~~~~---~~~-----~g~~~~-----~~~~l~~~l~~aDiVi  214 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGAR-SSADLAR---ITE-----MGLIPF-----PLNKLEEKVAEIDIVI  214 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeC-CHHHHHH---HHH-----CCCeee-----cHHHHHHHhccCCEEE
Confidence            3579999996 88999999999999999999999 4322211   111     122221     2345677788999999


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      ++..
T Consensus       215 nt~P  218 (287)
T TIGR02853       215 NTIP  218 (287)
T ss_pred             ECCC
Confidence            9763

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.72  E-value=0.0055  Score=52.91  Aligned_cols=68  Identities=21%  Similarity=0.190  Sum_probs=48.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      .++++|+|. |.+|..+++.|.+.|.+|++.+| ++.......   .     .+.+++     ..+.+.+.+.++|+||+
T Consensus       152 g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r-~~~~~~~~~---~-----~G~~~~-----~~~~l~~~l~~aDiVI~  216 (296)
T PRK08306        152 GSNVLVLGF-GRTGMTLARTLKALGANVTVGAR-KSAHLARIT---E-----MGLSPF-----HLSELAEEVGKIDIIFN  216 (296)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH---H-----cCCeee-----cHHHHHHHhCCCCEEEE
Confidence            689999996 88999999999999999999999 433222211   1     122322     23456677889999999


Q ss_pred             ccC
Q 020334           85 VAA   87 (327)
Q Consensus        85 ~a~   87 (327)
                      +..
T Consensus       217 t~p  219 (296)
T PRK08306        217 TIP  219 (296)
T ss_pred             CCC
Confidence            863

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.72  E-value=0.041  Score=46.15  Aligned_cols=105  Identities=19%  Similarity=0.202  Sum_probs=64.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcch----------h---------hhhhCCCCCCCCeEEEeC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKD----------L---------SFLTNLPGASERLQIFNA   64 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~----------~---------~~~~~~~~~~~~~~~~~~   64 (327)
                      ..+|+|.|+ |.+|+++++.|+..|. ++++++.+.-+....          +         ..+.+. +..-+++.+..
T Consensus        32 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~l-np~v~i~~~~~  109 (245)
T PRK05690         32 AARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARI-NPHIAIETINA  109 (245)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHH-CCCCEEEEEec
Confidence            578999997 9999999999999985 677777632211000          0         011111 11124455555


Q ss_pred             CCCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccc
Q 020334           65 DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSG  130 (327)
Q Consensus        65 D~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~  130 (327)
                      .+. .+.+.++++++|+||.|...       ..         .-..+-++|++.+  +.+|+.++.
T Consensus       110 ~i~-~~~~~~~~~~~DiVi~~~D~-------~~---------~r~~ln~~~~~~~--ip~v~~~~~  156 (245)
T PRK05690        110 RLD-DDELAALIAGHDLVLDCTDN-------VA---------TRNQLNRACFAAK--KPLVSGAAI  156 (245)
T ss_pred             cCC-HHHHHHHHhcCCEEEecCCC-------HH---------HHHHHHHHHHHhC--CEEEEeeec
Confidence            554 45567788899999988641       11         1234567777776  567775543

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.72  E-value=0.037  Score=46.21  Aligned_cols=108  Identities=19%  Similarity=0.159  Sum_probs=64.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhh--------------------hhhCCCCCCCCeEEEe
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLS--------------------FLTNLPGASERLQIFN   63 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~   63 (327)
                      ..+|+|.|+ |.+|+++++.|+..|. ++++++.+.-+. +.+.                    .+.+. +..-+++.+.
T Consensus        24 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~-sNL~RQ~l~~~~diG~~Ka~~a~~~l~~i-np~v~i~~~~  100 (240)
T TIGR02355        24 ASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSL-SNLQRQVLHSDANIGQPKVESAKDALTQI-NPHIAINPIN  100 (240)
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccc-cCcccceeeeHhhCCCcHHHHHHHHHHHH-CCCcEEEEEe
Confidence            468999995 9999999999999985 677777742211 1110                    11111 1012344444


Q ss_pred             CCCCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeee
Q 020334           64 ADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVY  134 (327)
Q Consensus        64 ~D~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~  134 (327)
                      ..+ +.+.+.+++.++|+||.+....       .         .-..+-+.|.+.+  ..+|+.++...+|
T Consensus       101 ~~i-~~~~~~~~~~~~DlVvd~~D~~-------~---------~r~~ln~~~~~~~--ip~v~~~~~g~~G  152 (240)
T TIGR02355       101 AKL-DDAELAALIAEHDIVVDCTDNV-------E---------VRNQLNRQCFAAK--VPLVSGAAIRMEG  152 (240)
T ss_pred             ccC-CHHHHHHHhhcCCEEEEcCCCH-------H---------HHHHHHHHHHHcC--CCEEEEEecccEe
Confidence            434 3455677888999999886421       1         1234567777776  5678766554443

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.70  E-value=0.0089  Score=54.57  Aligned_cols=75  Identities=19%  Similarity=0.151  Sum_probs=52.3

Q ss_pred             CCCeEEEeCC----------------cchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCC
Q 020334            4 QKGKVCVTGG----------------TGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN   67 (327)
Q Consensus         4 ~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   67 (327)
                      .+++||||+|                ||-.|.+|++++..+|++|+.+.- .. ...          .+.+++.+..  .
T Consensus       255 ~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~G-p~-~~~----------~p~~v~~i~V--~  320 (475)
T PRK13982        255 AGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISG-PV-DLA----------DPQGVKVIHV--E  320 (475)
T ss_pred             CCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeC-Cc-CCC----------CCCCceEEEe--c
Confidence            4689999975                799999999999999999998864 21 110          0235666553  3


Q ss_pred             ChhHHHHHhc---CCCEEEEccCCCCCC
Q 020334           68 DPESFDAAIA---GCAGVIHVAAPIDID   92 (327)
Q Consensus        68 d~~~~~~~~~---~~d~vih~a~~~~~~   92 (327)
                      ...++.+.+.   ..|++|++|+..++.
T Consensus       321 ta~eM~~av~~~~~~Di~I~aAAVaDyr  348 (475)
T PRK13982        321 SARQMLAAVEAALPADIAIFAAAVADWR  348 (475)
T ss_pred             CHHHHHHHHHhhCCCCEEEEecccccee
Confidence            3444444332   379999999987754

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.68  E-value=0.0099  Score=54.69  Aligned_cols=35  Identities=17%  Similarity=0.240  Sum_probs=29.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC--CCeEEEEEcCCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH--GYFVTTTVRSDPE   41 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~   41 (327)
                      ||+|.|.| +|++|..++..|++.  |++|+++++ ++.
T Consensus         1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~-~~~   37 (473)
T PLN02353          1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDI-SVP   37 (473)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEEC-CHH
Confidence            46799998 699999999999988  588999998 443

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=96.68  E-value=0.022  Score=42.13  Aligned_cols=31  Identities=32%  Similarity=0.592  Sum_probs=26.8

Q ss_pred             eEEEeCCcchhHHHHHHHHHHC-CCeEEEEEc
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVR   37 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r   37 (327)
                      +|.|+|++|.+|..+++.|.+. ++++.++..
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~   32 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAA   32 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEe
Confidence            5889999999999999999984 888888733

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.67  E-value=0.021  Score=45.15  Aligned_cols=77  Identities=17%  Similarity=0.266  Sum_probs=48.5

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCC--Ccc------------h----hhhhhCCCCCCCCeEEEeCCCC
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPE--HKK------------D----LSFLTNLPGASERLQIFNADLN   67 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~--~~~------------~----~~~~~~~~~~~~~~~~~~~D~~   67 (327)
                      +|+|.|+ |.+|+++++.|+..|. +++.++.+.-+  +..            +    ...+.+. +..-+++.+...+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~l-np~v~i~~~~~~~~   78 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREI-NPFVKIEAINIKID   78 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHH-CCCCEEEEEEeecC
Confidence            5899995 9999999999999997 58888884311  100            0    0011111 00123444555553


Q ss_pred             ChhHHHHHhcCCCEEEEcc
Q 020334           68 DPESFDAAIAGCAGVIHVA   86 (327)
Q Consensus        68 d~~~~~~~~~~~d~vih~a   86 (327)
                      . +.+.++++++|+||.|.
T Consensus        79 ~-~~~~~~l~~~DlVi~~~   96 (174)
T cd01487          79 E-NNLEGLFGDCDIVVEAF   96 (174)
T ss_pred             h-hhHHHHhcCCCEEEECC
Confidence            3 55677888999999884

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.66  E-value=0.0083  Score=51.04  Aligned_cols=57  Identities=12%  Similarity=0.137  Sum_probs=47.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+++++|+|+++.+|+.++..|.++|.+|++..++.                              ..+.+.++++|+||
T Consensus       157 ~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t------------------------------~~l~~~~~~ADIVI  206 (286)
T PRK14175        157 EGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS------------------------------KDMASYLKDADVIV  206 (286)
T ss_pred             CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc------------------------------hhHHHHHhhCCEEE
Confidence            478999999999999999999999999999887611                              13566788899999


Q ss_pred             EccCCCC
Q 020334           84 HVAAPID   90 (327)
Q Consensus        84 h~a~~~~   90 (327)
                      .+.+...
T Consensus       207 sAvg~p~  213 (286)
T PRK14175        207 SAVGKPG  213 (286)
T ss_pred             ECCCCCc
Confidence            9887543

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.66  E-value=0.0081  Score=53.00  Aligned_cols=75  Identities=20%  Similarity=0.140  Sum_probs=48.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----CCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----GCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d   80 (327)
                      +++|||.||+|.+|+++++.+...|..+++..+ +.+..+.++.+-         .-...|..+++..+...+    ++|
T Consensus       158 g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~-s~e~~~l~k~lG---------Ad~vvdy~~~~~~e~~kk~~~~~~D  227 (347)
T KOG1198|consen  158 GKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTAC-SKEKLELVKKLG---------ADEVVDYKDENVVELIKKYTGKGVD  227 (347)
T ss_pred             CCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEc-ccchHHHHHHcC---------CcEeecCCCHHHHHHHHhhcCCCcc
Confidence            568999999999999999999988844444444 333333333221         112256666554444443    589


Q ss_pred             EEEEccCCC
Q 020334           81 GVIHVAAPI   89 (327)
Q Consensus        81 ~vih~a~~~   89 (327)
                      +|++|++..
T Consensus       228 vVlD~vg~~  236 (347)
T KOG1198|consen  228 VVLDCVGGS  236 (347)
T ss_pred             EEEECCCCC
Confidence            999999864

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.65  E-value=0.0026  Score=52.50  Aligned_cols=36  Identities=39%  Similarity=0.466  Sum_probs=31.9

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH   42 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   42 (327)
                      |+|.|+||+|.+|+.++..|++.|++|++.+| +++.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r-~~~~   36 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSR-DLEK   36 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEc-CHHH
Confidence            46999999999999999999999999999998 4433

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=96.64  E-value=0.088  Score=48.92  Aligned_cols=172  Identities=19%  Similarity=0.175  Sum_probs=99.4

Q ss_pred             CCeEEEeCCc-chhHHHHHHHHHHCCCeEEEEEcCCC-CCcchhhhhhCCCCC-CCCeEEEeCCCCChhHHHHHhc----
Q 020334            5 KGKVCVTGGT-GFIGSWLIMRLLDHGYFVTTTVRSDP-EHKKDLSFLTNLPGA-SERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         5 ~~~ilVtGat-G~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      .+..|||||+ |-||..++..|+..|..|++..-+-. ......+.+...... ....-.+..+..+..+++.+++    
T Consensus       396 d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~  475 (866)
T COG4982         396 DKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGD  475 (866)
T ss_pred             cceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhcc
Confidence            4568999976 88999999999999999998766322 122222333222111 1234555666666555555542    


Q ss_pred             -----------------CCCEEEEccCCCC---CCCCchHH-HHHHHHHhHHHHHHHHHHhcCC---c---cEEEEeccc
Q 020334           78 -----------------GCAGVIHVAAPID---IDGKETEE-VMTQRAVNGTIGILKSCLKSGT---V---KRFVYTSSG  130 (327)
Q Consensus        78 -----------------~~d~vih~a~~~~---~~~~~~~~-~~~~~nv~~~~~l~~~~~~~~~---~---~~~v~~SS~  130 (327)
                                       .+|.+|-+|++.-   .....+.. ....+-+..+.+++-.+++.+.   +   -++|...|.
T Consensus       476 eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgSP  555 (866)
T COG4982         476 EQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGSP  555 (866)
T ss_pred             ccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCCC
Confidence                             1477888887632   11112211 2233334556666666665541   1   245544442


Q ss_pred             eeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc----CCcEEEEecCceecCCC
Q 020334          131 STVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH----GLDLVTLIPSFVVGPFI  199 (327)
Q Consensus       131 ~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~R~~~v~G~~~  199 (327)
                              +...+               .....|+.+|...|.++..+..+.    .+.++-.+.|++-|.+.
T Consensus       556 --------NrG~F---------------GgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGL  605 (866)
T COG4982         556 --------NRGMF---------------GGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGL  605 (866)
T ss_pred             --------CCCcc---------------CCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccc
Confidence                    22111               113469999999999999887654    24555566777766654

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=96.64  E-value=0.004  Score=54.17  Aligned_cols=75  Identities=20%  Similarity=0.210  Sum_probs=57.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChh-HHHHHhcCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPE-SFDAAIAGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~d~   81 (327)
                      ++++||+.| +||+...+++.|++++ .+|++.+| ....   .+.+..    +.+++.+..|+.+.+ .+++..+..|.
T Consensus         1 ~~~~vlllg-sg~v~~p~~d~ls~~~dv~vtva~~-~~~~---~~~~~~----~~~~~av~ldv~~~~~~L~~~v~~~D~   71 (445)
T KOG0172|consen    1 TKKGVLLLG-SGFVSRPVADFLSRKKDVNVTVASR-TLKD---AEALVK----GINIKAVSLDVADEELALRKEVKPLDL   71 (445)
T ss_pred             CCcceEEec-CccccchHHHHHhhcCCceEEEehh-hHHH---HHHHhc----CCCccceEEEccchHHHHHhhhcccce
Confidence            367899999 5999999999999874 68888888 3222   233322    245889999999988 88888888898


Q ss_pred             EEEccC
Q 020334           82 VIHVAA   87 (327)
Q Consensus        82 vih~a~   87 (327)
                      ++-+.-
T Consensus        72 viSLlP   77 (445)
T KOG0172|consen   72 VISLLP   77 (445)
T ss_pred             eeeecc
Confidence            887753

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.63  E-value=0.016  Score=50.13  Aligned_cols=34  Identities=24%  Similarity=0.236  Sum_probs=27.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r   37 (327)
                      ||.+|.|.||||++|..|++.|.++. .++..+..
T Consensus         1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s   35 (313)
T PRK11863          1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPE   35 (313)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEec
Confidence            56799999999999999999999885 35555544

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.61  E-value=0.0056  Score=52.66  Aligned_cols=40  Identities=23%  Similarity=0.193  Sum_probs=34.2

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH   42 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   42 (327)
                      |...+++|.|+|+ |.+|..++..|+..|++|++.++ +++.
T Consensus         1 ~~~~~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~-~~~~   40 (286)
T PRK07819          1 MSDAIQRVGVVGA-GQMGAGIAEVCARAGVDVLVFET-TEEL   40 (286)
T ss_pred             CCCCccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEEC-CHHH
Confidence            5545578999996 99999999999999999999999 5443

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.60  E-value=0.014  Score=51.55  Aligned_cols=37  Identities=19%  Similarity=0.247  Sum_probs=32.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH   42 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   42 (327)
                      ..+|||+||+|.+|..+++.+...|.+|+++++ ++.+
T Consensus       152 g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~-~~~~  188 (338)
T cd08295         152 GETVFVSAASGAVGQLVGQLAKLKGCYVVGSAG-SDEK  188 (338)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeC-CHHH
Confidence            568999999999999999988889999999888 4433

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.60  E-value=0.045  Score=46.30  Aligned_cols=106  Identities=18%  Similarity=0.310  Sum_probs=62.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhh----------------CCCCCCCC--eEEEeCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLT----------------NLPGASER--LQIFNAD   65 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~--~~~~~~D   65 (327)
                      ..+|+|.|+ |.+|+++++.|+..| -++++++.+.-.....-.++.                ......+.  ++.+. +
T Consensus        30 ~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~-~  107 (268)
T PRK15116         30 DAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD-D  107 (268)
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe-c
Confidence            568999995 999999999999999 578888874211100000000                00001223  34332 2


Q ss_pred             CCChhHHHHHhc-CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccc
Q 020334           66 LNDPESFDAAIA-GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSG  130 (327)
Q Consensus        66 ~~d~~~~~~~~~-~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~  130 (327)
                      ..+++.+.+++. ++|+||.+....                ..-..|.+.|++.+  ..+|..+.+
T Consensus       108 ~i~~e~~~~ll~~~~D~VIdaiD~~----------------~~k~~L~~~c~~~~--ip~I~~gGa  155 (268)
T PRK15116        108 FITPDNVAEYMSAGFSYVIDAIDSV----------------RPKAALIAYCRRNK--IPLVTTGGA  155 (268)
T ss_pred             ccChhhHHHHhcCCCCEEEEcCCCH----------------HHHHHHHHHHHHcC--CCEEEECCc
Confidence            334556666664 699999887531                12245778888876  456655443

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.59  E-value=0.013  Score=52.93  Aligned_cols=70  Identities=16%  Similarity=0.127  Sum_probs=52.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v   82 (327)
                      +|+|+|+|+ |.+|..+++.+.+.|++|++++. ++......  .        .-.++..|..|.+.+.++++  ++|.|
T Consensus        12 ~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~-~~~~~~~~--~--------ad~~~~~~~~d~~~l~~~~~~~~id~v   79 (395)
T PRK09288         12 ATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDR-YANAPAMQ--V--------AHRSHVIDMLDGDALRAVIEREKPDYI   79 (395)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC-CCCCchHH--h--------hhheEECCCCCHHHHHHHHHHhCCCEE
Confidence            468999995 89999999999999999999988 44322111  0        11356688889988888887  78988


Q ss_pred             EEcc
Q 020334           83 IHVA   86 (327)
Q Consensus        83 ih~a   86 (327)
                      +...
T Consensus        80 i~~~   83 (395)
T PRK09288         80 VPEI   83 (395)
T ss_pred             EEee
Confidence            8653

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.57  E-value=0.0027  Score=49.40  Aligned_cols=78  Identities=22%  Similarity=0.274  Sum_probs=45.1

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEcc
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHVA   86 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~a   86 (327)
                      ||.|.|| |-.|++++..|+.+|++|+...| +++....+..-.....-.+++..-. .+.-..+++++++++|+||-+.
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~-~~~~~~~i~~~~~n~~~~~~~~l~~-~i~~t~dl~~a~~~ad~Iiiav   77 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGR-DEEQIEEINETRQNPKYLPGIKLPE-NIKATTDLEEALEDADIIIIAV   77 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETS-CHHHHHHHHHHTSETTTSTTSBEET-TEEEESSHHHHHTT-SEEEE-S
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEec-cHHHHHHHHHhCCCCCCCCCcccCc-ccccccCHHHHhCcccEEEecc
Confidence            6899996 99999999999999999999999 4432222221111000011111111 1111234567788999998655


Q ss_pred             C
Q 020334           87 A   87 (327)
Q Consensus        87 ~   87 (327)
                      .
T Consensus        78 P   78 (157)
T PF01210_consen   78 P   78 (157)
T ss_dssp             -
T ss_pred             c
Confidence            3

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.54  E-value=0.0058  Score=55.85  Aligned_cols=32  Identities=38%  Similarity=0.648  Sum_probs=30.4

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      |+|.|+||+|.+|..+++.|.+.|++|++.+|
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r   32 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGR   32 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEEC
Confidence            47999999999999999999999999999999

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.53  E-value=0.026  Score=52.25  Aligned_cols=102  Identities=18%  Similarity=0.152  Sum_probs=62.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCC--------------h-
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLND--------------P-   69 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--------------~-   69 (327)
                      ..+|+|+|+ |-+|...+..+...|.+|+++++ ++.+....+.+        +.+++..|..+              . 
T Consensus       165 g~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~-~~~rle~aesl--------GA~~v~i~~~e~~~~~~gya~~~s~~~  234 (509)
T PRK09424        165 PAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDT-RPEVAEQVESM--------GAEFLELDFEEEGGSGDGYAKVMSEEF  234 (509)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHc--------CCeEEEeccccccccccchhhhcchhH
Confidence            568999996 99999999999999999999999 54444433332        33333222211              1 


Q ss_pred             -hH----HHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           70 -ES----FDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        70 -~~----~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                       +.    +.+.+.++|+||.+++......  +  ..      .+...++.++..+   .++.++.
T Consensus       235 ~~~~~~~~~~~~~gaDVVIetag~pg~~a--P--~l------it~~~v~~mkpGg---vIVdvg~  286 (509)
T PRK09424        235 IKAEMALFAEQAKEVDIIITTALIPGKPA--P--KL------ITAEMVASMKPGS---VIVDLAA  286 (509)
T ss_pred             HHHHHHHHHhccCCCCEEEECCCCCcccC--c--ch------HHHHHHHhcCCCC---EEEEEcc
Confidence             11    1222347999999998643211  1  11      1345666666543   7887775

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.53  E-value=0.0078  Score=51.59  Aligned_cols=73  Identities=22%  Similarity=0.322  Sum_probs=47.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      .+++++|+|+ |.+|++++..|.+.| .+|++++| +.++...+......   ...+.+   +.    ...+.+.++|+|
T Consensus       122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R-~~~~a~~l~~~~~~---~~~~~~---~~----~~~~~~~~~Div  189 (278)
T PRK00258        122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNR-TVERAEELAKLFGA---LGKAEL---DL----ELQEELADFDLI  189 (278)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeC-CHHHHHHHHHHhhh---ccceee---cc----cchhccccCCEE
Confidence            3578999996 999999999999999 78999999 54333333221110   001111   11    123455678999


Q ss_pred             EEccCC
Q 020334           83 IHVAAP   88 (327)
Q Consensus        83 ih~a~~   88 (327)
                      |++...
T Consensus       190 InaTp~  195 (278)
T PRK00258        190 INATSA  195 (278)
T ss_pred             EECCcC
Confidence            998753

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=96.51  E-value=0.0095  Score=50.30  Aligned_cols=70  Identities=16%  Similarity=0.169  Sum_probs=55.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v   82 (327)
                      ..||++.| ||=+|+.++-.+.+-|.+|++++|=.......+           -.+.+..|..|.+++..+++  ++|.|
T Consensus        12 a~kvmLLG-SGELGKEvaIe~QRLG~eViAVDrY~~APAmqV-----------Ahrs~Vi~MlD~~al~avv~rekPd~I   79 (394)
T COG0027          12 ATKVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQV-----------AHRSYVIDMLDGDALRAVVEREKPDYI   79 (394)
T ss_pred             CeEEEEec-CCccchHHHHHHHhcCCEEEEecCcCCChhhhh-----------hhheeeeeccCHHHHHHHHHhhCCCee
Confidence            46899999 799999999999999999999999333333222           23556789999999999886  68888


Q ss_pred             EEcc
Q 020334           83 IHVA   86 (327)
Q Consensus        83 ih~a   86 (327)
                      |--.
T Consensus        80 VpEi   83 (394)
T COG0027          80 VPEI   83 (394)
T ss_pred             eehh
Confidence            7654

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.51  E-value=0.0084  Score=53.52  Aligned_cols=74  Identities=16%  Similarity=0.156  Sum_probs=53.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      ..+|+|+|+ |-+|..+++.|...|.+|++++| ++.....+....      .  ..+..+..+.+.+.+.+.++|+||+
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~-~~~~~~~l~~~~------g--~~v~~~~~~~~~l~~~l~~aDvVI~  236 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDI-NIDRLRQLDAEF------G--GRIHTRYSNAYEIEDAVKRADLLIG  236 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHhc------C--ceeEeccCCHHHHHHHHccCCEEEE
Confidence            457999986 99999999999999999999998 443322221110      1  1223455667788888899999999


Q ss_pred             ccCC
Q 020334           85 VAAP   88 (327)
Q Consensus        85 ~a~~   88 (327)
                      ++..
T Consensus       237 a~~~  240 (370)
T TIGR00518       237 AVLI  240 (370)
T ss_pred             cccc
Confidence            8754

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.50  E-value=0.033  Score=49.48  Aligned_cols=109  Identities=14%  Similarity=0.073  Sum_probs=65.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchh-------------------hhhhCCCCCCCCeEEEeC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDL-------------------SFLTNLPGASERLQIFNA   64 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~   64 (327)
                      ..+|+|.|+ |.+|+++++.|+..|. ++++++.+.-+....-                   ..+.+. +..-+++.+..
T Consensus        28 ~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~-np~v~v~~~~~  105 (355)
T PRK05597         28 DAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLAL-NPDVKVTVSVR  105 (355)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHH-CCCcEEEEEEe
Confidence            578999996 9999999999999985 6777777421110000                   011111 11123455555


Q ss_pred             CCCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeee
Q 020334           65 DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVY  134 (327)
Q Consensus        65 D~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~  134 (327)
                      .++ .+...+++.++|+||.|....       .         .-..+-++|.+.+  ..+|+.++.+.+|
T Consensus       106 ~i~-~~~~~~~~~~~DvVvd~~d~~-------~---------~r~~~n~~c~~~~--ip~v~~~~~g~~g  156 (355)
T PRK05597        106 RLT-WSNALDELRDADVILDGSDNF-------D---------TRHLASWAAARLG--IPHVWASILGFDA  156 (355)
T ss_pred             ecC-HHHHHHHHhCCCEEEECCCCH-------H---------HHHHHHHHHHHcC--CCEEEEEEecCeE
Confidence            554 445667788999999887421       1         1123556777776  5688876554443

>PRK08223 hypothetical protein; Validated

Probab=96.49  E-value=0.07  Score=45.48  Aligned_cols=108  Identities=15%  Similarity=0.207  Sum_probs=63.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcch----------h---------hhhhCCCCCCCCeEEEeC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKD----------L---------SFLTNLPGASERLQIFNA   64 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~----------~---------~~~~~~~~~~~~~~~~~~   64 (327)
                      ..+|+|.|+ |.+|++++..|+..|. ++.++|.+.-+....          +         ..+.++ +..-+++.+..
T Consensus        27 ~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~i-NP~v~V~~~~~  104 (287)
T PRK08223         27 NSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDI-NPELEIRAFPE  104 (287)
T ss_pred             cCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHH-CCCCEEEEEec
Confidence            568999995 9999999999999985 677777632211000          0         011111 11123455555


Q ss_pred             CCCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce
Q 020334           65 DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS  131 (327)
Q Consensus        65 D~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~  131 (327)
                      .++ ++...++++++|+||.+.-...              +..-..+-++|++.+  +.+|+.|...
T Consensus       105 ~l~-~~n~~~ll~~~DlVvD~~D~~~--------------~~~r~~ln~~c~~~~--iP~V~~~~~g  154 (287)
T PRK08223        105 GIG-KENADAFLDGVDVYVDGLDFFE--------------FDARRLVFAACQQRG--IPALTAAPLG  154 (287)
T ss_pred             ccC-ccCHHHHHhCCCEEEECCCCCc--------------HHHHHHHHHHHHHcC--CCEEEEeccC
Confidence            554 3456677888999986542110              111245667788877  5677765443

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.49  E-value=0.019  Score=50.32  Aligned_cols=31  Identities=32%  Similarity=0.406  Sum_probs=26.6

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHH-CCCe
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLD-HGYF   31 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~-~g~~   31 (327)
                      |....++|.|.||||++|..+++.|.+ ...+
T Consensus         1 ~~~~~~~VaIvGATG~vG~ell~lL~~h~~f~   32 (347)
T PRK06728          1 MSEKGYHVAVVGATGAVGQKIIELLEKETKFN   32 (347)
T ss_pred             CCCCCCEEEEEeCCCHHHHHHHHHHHHCCCCC
Confidence            666667999999999999999999995 5666

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.49  E-value=0.033  Score=48.89  Aligned_cols=33  Identities=21%  Similarity=0.121  Sum_probs=30.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      ..+|||+||+|.+|..+++.+...|.+|+++++
T Consensus       139 g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~  171 (325)
T TIGR02825       139 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAG  171 (325)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeC
Confidence            468999999999999999988888999999888

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=96.48  E-value=0.0072  Score=57.28  Aligned_cols=73  Identities=15%  Similarity=0.173  Sum_probs=56.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi   83 (327)
                      ..+|+|.|+ |-+|+++++.|.++|++|++++. +++..+..+   +     .+...+.||.+|++.++++ ++++|.++
T Consensus       417 ~~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~-d~~~~~~~~---~-----~g~~~i~GD~~~~~~L~~a~i~~a~~vi  486 (558)
T PRK10669        417 CNHALLVGY-GRVGSLLGEKLLAAGIPLVVIET-SRTRVDELR---E-----RGIRAVLGNAANEEIMQLAHLDCARWLL  486 (558)
T ss_pred             CCCEEEECC-ChHHHHHHHHHHHCCCCEEEEEC-CHHHHHHHH---H-----CCCeEEEcCCCCHHHHHhcCccccCEEE
Confidence            357899995 99999999999999999999998 544433332   1     3678999999999988764 45788777


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      -+..
T Consensus       487 v~~~  490 (558)
T PRK10669        487 LTIP  490 (558)
T ss_pred             EEcC
Confidence            5543

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.48  E-value=0.06  Score=46.64  Aligned_cols=107  Identities=17%  Similarity=0.235  Sum_probs=65.4

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhh--------------------hhhCCCCCCCCeEEEeCC
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLS--------------------FLTNLPGASERLQIFNAD   65 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~D   65 (327)
                      +|||.|+ |.+|.++++.|+..|. +++++|.+.-+. +.+.                    .+.+. +..-.++.+..+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~-sNLnRQflf~~~dVGk~Kaevaa~~l~~l-Np~v~V~~~~~~   77 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDL-SNLNRQFLFRKKHVGKSKAQVAKEAVLSF-NPNVKIVAYHAN   77 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcch-hhcCcCccCChhHcCcHHHHHHHHHHHHH-CCCCeEEEEecc
Confidence            5899996 9999999999999985 577777632211 1110                    01111 111345666677


Q ss_pred             CCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeee
Q 020334           66 LNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVY  134 (327)
Q Consensus        66 ~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~  134 (327)
                      +.+.....+++++.|+||.+.-.                ...-..+-+.|+..+  ..+|..++.+.+|
T Consensus        78 i~~~~~~~~f~~~~DvVv~a~Dn----------------~~ar~~in~~c~~~~--ip~I~~gt~G~~G  128 (312)
T cd01489          78 IKDPDFNVEFFKQFDLVFNALDN----------------LAARRHVNKMCLAAD--VPLIESGTTGFLG  128 (312)
T ss_pred             CCCccchHHHHhcCCEEEECCCC----------------HHHHHHHHHHHHHCC--CCEEEEecCccee
Confidence            77644345677889999877531                111234556666666  5688877766554

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.47  E-value=0.017  Score=50.72  Aligned_cols=74  Identities=23%  Similarity=0.206  Sum_probs=46.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh---hHHHHHhc--CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP---ESFDAAIA--GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~--~~   79 (327)
                      ..+|||+||+|.+|+.+++.+...|+.++++.. ++++...+..+-       --+.+.  ..+.   +.+.++..  ++
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~-s~~k~~~~~~lG-------Ad~vi~--y~~~~~~~~v~~~t~g~gv  212 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVS-SSEKLELLKELG-------ADHVIN--YREEDFVEQVRELTGGKGV  212 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEec-CHHHHHHHHhcC-------CCEEEc--CCcccHHHHHHHHcCCCCc
Confidence            578999999999999999999999977666665 322222333221       111211  2221   22333443  58


Q ss_pred             CEEEEccCC
Q 020334           80 AGVIHVAAP   88 (327)
Q Consensus        80 d~vih~a~~   88 (327)
                      |+|+.+.|.
T Consensus       213 Dvv~D~vG~  221 (326)
T COG0604         213 DVVLDTVGG  221 (326)
T ss_pred             eEEEECCCH
Confidence            999999873

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.46  E-value=0.0061  Score=52.81  Aligned_cols=66  Identities=23%  Similarity=0.339  Sum_probs=45.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +++|.|+| .|.+|..+++.|++.|++|++.+| ++.....+.   .     .++..       ..++.++++++|+||-
T Consensus         2 ~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~-~~~~~~~~~---~-----~g~~~-------~~~~~e~~~~~d~vi~   64 (296)
T PRK11559          2 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDR-NPEAVAEVI---A-----AGAET-------ASTAKAVAEQCDVIIT   64 (296)
T ss_pred             CceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcC-CHHHHHHHH---H-----CCCee-------cCCHHHHHhcCCEEEE
Confidence            46899999 599999999999999999999988 443322221   1     11111       1224456678899987


Q ss_pred             ccC
Q 020334           85 VAA   87 (327)
Q Consensus        85 ~a~   87 (327)
                      |..
T Consensus        65 ~vp   67 (296)
T PRK11559         65 MLP   67 (296)
T ss_pred             eCC
Confidence            764

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.42  E-value=0.034  Score=48.42  Aligned_cols=94  Identities=19%  Similarity=0.179  Sum_probs=62.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      .++|+|+|+ |.+|...++.+...|.+|++++| ++++.+...++       ....++...  |++..+.+-+.+|.||.
T Consensus       167 G~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~-~~~K~e~a~~l-------GAd~~i~~~--~~~~~~~~~~~~d~ii~  235 (339)
T COG1064         167 GKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITR-SEEKLELAKKL-------GADHVINSS--DSDALEAVKEIADAIID  235 (339)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeC-ChHHHHHHHHh-------CCcEEEEcC--CchhhHHhHhhCcEEEE
Confidence            578999997 59999999999989999999999 55554444433       122333322  55444444444899999


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      +++ ..         .       ....++.++..|   +++.++=
T Consensus       236 tv~-~~---------~-------~~~~l~~l~~~G---~~v~vG~  260 (339)
T COG1064         236 TVG-PA---------T-------LEPSLKALRRGG---TLVLVGL  260 (339)
T ss_pred             CCC-hh---------h-------HHHHHHHHhcCC---EEEEECC
Confidence            987 21         1       234556666655   7776663

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.41  E-value=0.025  Score=49.19  Aligned_cols=66  Identities=18%  Similarity=0.248  Sum_probs=48.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..++|.|.| .|-||+.+++.|...|++|++.+| .....             ..+..+    ....++.+++.++|+|+
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~-~~~~~-------------~~~~~~----~~~~~l~e~l~~aDvvv  195 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSR-SRKSW-------------PGVQSF----AGREELSAFLSQTRVLI  195 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC-CCCCC-------------CCceee----cccccHHHHHhcCCEEE
Confidence            357899999 699999999999999999999988 32211             111111    12346888899999999


Q ss_pred             EccCC
Q 020334           84 HVAAP   88 (327)
Q Consensus        84 h~a~~   88 (327)
                      .+...
T Consensus       196 ~~lPl  200 (312)
T PRK15469        196 NLLPN  200 (312)
T ss_pred             ECCCC
Confidence            88764

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.40  E-value=0.01  Score=51.65  Aligned_cols=35  Identities=31%  Similarity=0.379  Sum_probs=31.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE   41 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (327)
                      .++|.|+|+ |-+|+.++..|+..|++|++.++ ++.
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~-~~~   41 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDP-APG   41 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeC-CHH
Confidence            368999995 99999999999999999999999 543

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.40  E-value=0.017  Score=44.67  Aligned_cols=58  Identities=22%  Similarity=0.291  Sum_probs=42.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+|+++|.|.+..+|..|+..|.++|..|+......                              ..+.+..+++|+||
T Consensus        35 ~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T------------------------------~~l~~~~~~ADIVV   84 (160)
T PF02882_consen   35 EGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT------------------------------KNLQEITRRADIVV   84 (160)
T ss_dssp             TT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS------------------------------SSHHHHHTTSSEEE
T ss_pred             CCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC------------------------------CcccceeeeccEEe
Confidence            478999999999999999999999999998765511                              22566778899999


Q ss_pred             EccCCCCC
Q 020334           84 HVAAPIDI   91 (327)
Q Consensus        84 h~a~~~~~   91 (327)
                      -++|....
T Consensus        85 sa~G~~~~   92 (160)
T PF02882_consen   85 SAVGKPNL   92 (160)
T ss_dssp             E-SSSTT-
T ss_pred             eeeccccc
Confidence            99886553

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.40  E-value=0.053  Score=45.46  Aligned_cols=93  Identities=26%  Similarity=0.360  Sum_probs=65.3

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi   83 (327)
                      |+|||.|||+ =|+.+++.|.++|+ |++.+- .+-......   .   .......+.|-+.+.+.+.++++  +++.||
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~-t~~g~~~~~---~---~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vI   71 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVA-TSYGGELLK---P---ELPGLEVRVGRLGDEEGLAEFLRENGIDAVI   71 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEE-hhhhHhhhc---c---ccCCceEEECCCCCHHHHHHHHHhCCCcEEE
Confidence            6899999986 59999999999998 654433 111111110   0   01356778888889999999986  799999


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCcc
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVK  122 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~  122 (327)
                      ...-++.        .      ..+.++.++|++.+ +.
T Consensus        72 DATHPfA--------~------~is~na~~a~~~~~-ip   95 (249)
T PF02571_consen   72 DATHPFA--------A------EISQNAIEACRELG-IP   95 (249)
T ss_pred             ECCCchH--------H------HHHHHHHHHHhhcC-cc
Confidence            8876543        2      23678889999887 54

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=96.40  E-value=0.025  Score=54.02  Aligned_cols=73  Identities=18%  Similarity=0.208  Sum_probs=57.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi   83 (327)
                      .++|+|.| .|-+|+.+++.|.++|+++++++. +++.....+   +     .+...+.||.+|++.++++ ++++|.+|
T Consensus       400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~-d~~~v~~~~---~-----~g~~v~~GDat~~~~L~~agi~~A~~vv  469 (601)
T PRK03659        400 KPQVIIVG-FGRFGQVIGRLLMANKMRITVLER-DISAVNLMR---K-----YGYKVYYGDATQLELLRAAGAEKAEAIV  469 (601)
T ss_pred             cCCEEEec-CchHHHHHHHHHHhCCCCEEEEEC-CHHHHHHHH---h-----CCCeEEEeeCCCHHHHHhcCCccCCEEE
Confidence            35789999 599999999999999999999998 554433332   2     3678899999999988764 56789888


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      -+..
T Consensus       470 ~~~~  473 (601)
T PRK03659        470 ITCN  473 (601)
T ss_pred             EEeC
Confidence            6643

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.36  E-value=0.046  Score=48.74  Aligned_cols=109  Identities=15%  Similarity=0.136  Sum_probs=65.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchh-------------------hhhhCCCCCCCCeEEEeC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDL-------------------SFLTNLPGASERLQIFNA   64 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~   64 (327)
                      ..+|+|+|+ |.+|+++++.|+..|. ++++++.+.-+....-                   ..+.+. +..-+++.+..
T Consensus        41 ~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~-np~v~i~~~~~  118 (370)
T PRK05600         41 NARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEI-QPDIRVNALRE  118 (370)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHH-CCCCeeEEeee
Confidence            568999995 9999999999999985 7888887421110000                   011111 11123455555


Q ss_pred             CCCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeee
Q 020334           65 DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVY  134 (327)
Q Consensus        65 D~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~  134 (327)
                      .++ .+.+.++++++|+||.|.-..       .         .-..+-+.|.+.+  ..+|+.+...-+|
T Consensus       119 ~i~-~~~~~~~~~~~DlVid~~Dn~-------~---------~r~~in~~~~~~~--iP~v~~~~~g~~G  169 (370)
T PRK05600        119 RLT-AENAVELLNGVDLVLDGSDSF-------A---------TKFLVADAAEITG--TPLVWGTVLRFHG  169 (370)
T ss_pred             ecC-HHHHHHHHhCCCEEEECCCCH-------H---------HHHHHHHHHHHcC--CCEEEEEEecCEE
Confidence            553 455677888999999886421       1         1224456677766  4577776544343

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.36  E-value=0.015  Score=47.13  Aligned_cols=78  Identities=14%  Similarity=0.234  Sum_probs=50.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCC--CCCcch-------hh---------hhhCCCCCCCCeEEEeCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSD--PEHKKD-------LS---------FLTNLPGASERLQIFNAD   65 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~-------~~---------~~~~~~~~~~~~~~~~~D   65 (327)
                      .++|+|.|+ |.+|+.++..|+..|. ++++++++.  .....+       +.         .+..+ +..-+++.+..+
T Consensus        21 ~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~i-np~~~i~~~~~~   98 (200)
T TIGR02354        21 QATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEI-NPYTEIEAYDEK   98 (200)
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHH-CCCCEEEEeeee
Confidence            578999996 8899999999999998 699888841  111111       00         01111 111234555555


Q ss_pred             CCChhHHHHHhcCCCEEEEc
Q 020334           66 LNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus        66 ~~d~~~~~~~~~~~d~vih~   85 (327)
                      ++ .+.+.+++.++|+||.+
T Consensus        99 i~-~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354        99 IT-EENIDKFFKDADIVCEA  117 (200)
T ss_pred             CC-HhHHHHHhcCCCEEEEC
Confidence            54 45677788899999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.34  E-value=0.011  Score=50.48  Aligned_cols=56  Identities=16%  Similarity=0.103  Sum_probs=46.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+|+|.|+|.+|.+|+.++..|+++|++|++..|...                              ++.+..+++|+||
T Consensus       158 ~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~------------------------------~l~e~~~~ADIVI  207 (301)
T PRK14194        158 TGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST------------------------------DAKALCRQADIVV  207 (301)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC------------------------------CHHHHHhcCCEEE
Confidence            4789999999999999999999999999999877210                              2556667789999


Q ss_pred             EccCCC
Q 020334           84 HVAAPI   89 (327)
Q Consensus        84 h~a~~~   89 (327)
                      -+.+..
T Consensus       208 savg~~  213 (301)
T PRK14194        208 AAVGRP  213 (301)
T ss_pred             EecCCh
Confidence            888753

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.30  E-value=0.0081  Score=52.74  Aligned_cols=33  Identities=39%  Similarity=0.451  Sum_probs=30.0

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDP   40 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (327)
                      |+|.|+|+ |.+|+.++..|++.|++|++.+| ++
T Consensus         2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r-~~   34 (325)
T PRK00094          2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWAR-DP   34 (325)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEEC-CH
Confidence            57999995 99999999999999999999999 44

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=96.30  E-value=0.021  Score=51.44  Aligned_cols=68  Identities=15%  Similarity=0.157  Sum_probs=51.7

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEEEE
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGVIH   84 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vih   84 (327)
                      ||+|+|+ |++|..+++.+.+.|++|++++. ++..... . .        --..+.+|..|++.+.++++  ++|.|+.
T Consensus         1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~-~~~~~~~-~-~--------ad~~~~~~~~d~~~l~~~~~~~~id~v~~   68 (380)
T TIGR01142         1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDR-YANAPAM-Q-V--------AHRSYVINMLDGDALRAVIEREKPDYIVP   68 (380)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEEeC-CCCCchh-h-h--------CceEEEcCCCCHHHHHHHHHHhCCCEEEe
Confidence            5899995 99999999999999999999988 4322211 0 0        11456678889999988887  7999886


Q ss_pred             cc
Q 020334           85 VA   86 (327)
Q Consensus        85 ~a   86 (327)
                      ..
T Consensus        69 ~~   70 (380)
T TIGR01142        69 EI   70 (380)
T ss_pred             cc
Confidence            54

This enzyme is an alternative to PurN (TIGR00639)

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.30  E-value=0.018  Score=51.69  Aligned_cols=33  Identities=21%  Similarity=0.279  Sum_probs=27.5

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH   42 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   42 (327)
                      +|.|.| +|++|..++..|+ .||+|+++++ ++.+
T Consensus         2 kI~VIG-lGyvGl~~A~~lA-~G~~VigvD~-d~~k   34 (388)
T PRK15057          2 KITISG-TGYVGLSNGLLIA-QNHEVVALDI-LPSR   34 (388)
T ss_pred             EEEEEC-CCHHHHHHHHHHH-hCCcEEEEEC-CHHH
Confidence            699998 6999999997766 5999999999 4433

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.28  E-value=0.038  Score=47.08  Aligned_cols=74  Identities=20%  Similarity=0.271  Sum_probs=44.7

Q ss_pred             CCCC-CCeEEEeCCcchhHHHHHHHHHHC--CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc
Q 020334            1 MEEQ-KGKVCVTGGTGFIGSWLIMRLLDH--GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         1 m~~~-~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      |..| +++|.|+| .|.||+.+++.|.+.  ++++.++...+++.........       +...   -..+   +++++.
T Consensus         1 ~~~m~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~-------g~~~---~~~~---~eell~   66 (271)
T PRK13302          1 MSSRPELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGL-------RRPP---PVVP---LDQLAT   66 (271)
T ss_pred             CCCCCeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhc-------CCCc---ccCC---HHHHhc
Confidence            4444 36899999 599999999999873  7887755442443332221110       0000   0123   445567


Q ss_pred             CCCEEEEccCC
Q 020334           78 GCAGVIHVAAP   88 (327)
Q Consensus        78 ~~d~vih~a~~   88 (327)
                      ++|+|+-|+..
T Consensus        67 ~~D~Vvi~tp~   77 (271)
T PRK13302         67 HADIVVEAAPA   77 (271)
T ss_pred             CCCEEEECCCc
Confidence            89999988763

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.26  E-value=0.047  Score=47.84  Aligned_cols=73  Identities=18%  Similarity=0.138  Sum_probs=46.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh---hHHHHHh-cCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP---ESFDAAI-AGCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~-~~~d   80 (327)
                      ..+|||+||+|-+|..+++.+...|.+|+++++ ++++...+..+        ++..+ .|..+.   +.+.++. .++|
T Consensus       144 g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~-s~~~~~~l~~~--------Ga~~v-i~~~~~~~~~~v~~~~~~gvd  213 (329)
T cd08294         144 GETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAG-SDDKVAWLKEL--------GFDAV-FNYKTVSLEEALKEAAPDGID  213 (329)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHc--------CCCEE-EeCCCccHHHHHHHHCCCCcE
Confidence            468999999999999999999899999999888 44333333221        11111 122222   2233222 2589


Q ss_pred             EEEEccC
Q 020334           81 GVIHVAA   87 (327)
Q Consensus        81 ~vih~a~   87 (327)
                      +|+++.+
T Consensus       214 ~vld~~g  220 (329)
T cd08294         214 CYFDNVG  220 (329)
T ss_pred             EEEECCC
Confidence            9999877

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.23  E-value=0.014  Score=49.74  Aligned_cols=35  Identities=20%  Similarity=0.212  Sum_probs=31.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE   41 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (327)
                      .++++|+|+ |.+|++++..|++.|++|++.+| ++.
T Consensus       117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R-~~~  151 (270)
T TIGR00507       117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANR-TVS  151 (270)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeC-CHH
Confidence            578999997 89999999999999999999999 443

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.22  E-value=0.014  Score=52.71  Aligned_cols=74  Identities=14%  Similarity=0.140  Sum_probs=51.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ..++|+|.|+ |-.|..++.+|.+.|. +|++..| +..+...+....      +.     +.....+++.+.+.++|+|
T Consensus       180 ~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nR-t~~ra~~La~~~------~~-----~~~~~~~~l~~~l~~aDiV  246 (414)
T PRK13940        180 SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANR-TIEKAQKITSAF------RN-----ASAHYLSELPQLIKKADII  246 (414)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECC-CHHHHHHHHHHh------cC-----CeEecHHHHHHHhccCCEE
Confidence            3578999996 9999999999999985 6888888 544433332211      11     1222335567778899999


Q ss_pred             EEccCCCC
Q 020334           83 IHVAAPID   90 (327)
Q Consensus        83 ih~a~~~~   90 (327)
                      |+|.+...
T Consensus       247 I~aT~a~~  254 (414)
T PRK13940        247 IAAVNVLE  254 (414)
T ss_pred             EECcCCCC
Confidence            99987543

>PRK07877 hypothetical protein; Provisional

Probab=96.20  E-value=0.061  Score=52.04  Aligned_cols=103  Identities=12%  Similarity=0.157  Sum_probs=65.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCC--CCcchh-------h---------hhhCCCCCCCCeEEEeC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDP--EHKKDL-------S---------FLTNLPGASERLQIFNA   64 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~--~~~~~~-------~---------~~~~~~~~~~~~~~~~~   64 (327)
                      ..+|+|.|+ | +|++++..|+..|.  ++++++.+.-  .+....       .         .+.. .+..-+++.+..
T Consensus       107 ~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~-inp~i~v~~~~~  183 (722)
T PRK07877        107 RLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAE-LDPYLPVEVFTD  183 (722)
T ss_pred             cCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHH-HCCCCEEEEEec
Confidence            578999999 8 99999999999984  7888877421  111110       0         0001 111234566666


Q ss_pred             CCCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           65 DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        65 D~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      .++ ++.+.+++.++|+||.|.-.+                ..-..+.++|.+.+  +.+|+-++
T Consensus       184 ~i~-~~n~~~~l~~~DlVvD~~D~~----------------~~R~~ln~~a~~~~--iP~i~~~~  229 (722)
T PRK07877        184 GLT-EDNVDAFLDGLDVVVEECDSL----------------DVKVLLREAARARR--IPVLMATS  229 (722)
T ss_pred             cCC-HHHHHHHhcCCCEEEECCCCH----------------HHHHHHHHHHHHcC--CCEEEEcC
Confidence            665 677888999999999886421                11234556777776  55776664

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.19  E-value=0.012  Score=54.82  Aligned_cols=39  Identities=31%  Similarity=0.291  Sum_probs=32.9

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH   42 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   42 (327)
                      |+ |.++|.|+| +|.+|+.++..|++.|++|++.++ +++.
T Consensus         1 ~~-~i~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~-~~~~   39 (495)
T PRK07531          1 MT-MIMKAACIG-GGVIGGGWAARFLLAGIDVAVFDP-HPEA   39 (495)
T ss_pred             CC-CcCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeC-CHHH
Confidence            44 346899998 599999999999999999999999 5444

>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.19  E-value=0.067  Score=47.08  Aligned_cols=32  Identities=22%  Similarity=0.328  Sum_probs=30.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      ..+|.|.| -||||..++-.++++|++|++++.
T Consensus         9 ~~~I~ViG-LGYVGLPlA~~fA~~G~~ViG~DI   40 (436)
T COG0677           9 SATIGVIG-LGYVGLPLAAAFASAGFKVIGVDI   40 (436)
T ss_pred             ceEEEEEc-cccccHHHHHHHHHcCCceEeEeC
Confidence            47899999 799999999999999999999999

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.19  E-value=0.04  Score=48.74  Aligned_cols=95  Identities=16%  Similarity=0.101  Sum_probs=52.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHH-CCCe---EEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLD-HGYF---VTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      ++|.|.||||++|..+++.|++ +.+.   +..+....  .......+       .+-.....++.+++.    +.++|+
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~--sg~~~~~f-------~g~~~~v~~~~~~~~----~~~~Di   68 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQ--AGGAAPSF-------GGKEGTLQDAFDIDA----LKKLDI   68 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchh--hCCccccc-------CCCcceEEecCChhH----hcCCCE
Confidence            6899999999999999995554 4555   55543311  11111111       111122234444333    357899


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCcc-EEEEeccce
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVK-RFVYTSSGS  131 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~v~~SS~~  131 (327)
                      |+.+++.          .       ....+...+.+.| .+ .+|=.||..
T Consensus        69 vf~a~~~----------~-------~s~~~~~~~~~aG-~~~~VID~Ss~f  101 (369)
T PRK06598         69 IITCQGG----------D-------YTNEVYPKLRAAG-WQGYWIDAASTL  101 (369)
T ss_pred             EEECCCH----------H-------HHHHHHHHHHhCC-CCeEEEECChHH
Confidence            9988762          1       1345556565555 32 366666543

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.16  E-value=0.019  Score=49.98  Aligned_cols=33  Identities=27%  Similarity=0.216  Sum_probs=30.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      ..|+|.|+| +|.+|+++++.|.+.|++|.+.+|
T Consensus         3 ~~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r   35 (308)
T PRK14619          3 QPKTIAILG-AGAWGSTLAGLASANGHRVRVWSR   35 (308)
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeC
Confidence            357899998 599999999999999999999998

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.14  E-value=0.0086  Score=51.66  Aligned_cols=35  Identities=23%  Similarity=0.324  Sum_probs=31.1

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH   42 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   42 (327)
                      ++|.|+|+ |.+|..++..|++.|++|++.++ ++..
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~-~~~~   36 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDI-KQEQ   36 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeC-CHHH
Confidence            57999996 99999999999999999999999 5433

>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein

Probab=96.12  E-value=0.024  Score=50.46  Aligned_cols=65  Identities=20%  Similarity=0.258  Sum_probs=49.8

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      +|+|+|| |++|..+++.+.+.|++|++++. ++.....  .+        .-+.+.+|..|++.+.++++.+|+|.
T Consensus         1 ~igiiG~-gql~~~l~~aa~~lG~~v~~~d~-~~~~p~~--~~--------ad~~~~~~~~d~~~i~~~a~~~dvit   65 (352)
T TIGR01161         1 TVGILGG-GQLGRMLALAARPLGIKVHVLDP-DANSPAV--QV--------ADHVVLAPFFDPAAIRELAESCDVIT   65 (352)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEECC-CCCCChh--Hh--------CceeEeCCCCCHHHHHHHHhhCCEEE
Confidence            4889997 89999999999999999999987 3322211  10        11345788999999999998888764

Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.12  E-value=0.11  Score=43.07  Aligned_cols=107  Identities=11%  Similarity=0.106  Sum_probs=64.1

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhh--------------------hhhCCCCCCCCeEEEeCC
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLS--------------------FLTNLPGASERLQIFNAD   65 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~D   65 (327)
                      +|||.| .|.+|.++++.|+..|. ++++++.+.-+ .+.+.                    .+.+. ...-+++.+..+
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve-~sNLnRQflf~~~dvGk~Ka~va~~~l~~~-np~v~i~~~~~~   77 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTID-VSNLNRQFLFRPKDIGRPKSEVAAEAVNDR-NPNCKVVPYQNK   77 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEc-chhhccccCCChhhCChHHHHHHHHHHHHH-CCCCEEEEEecc
Confidence            589999 59999999999999985 67777773211 11110                    00011 111345667777


Q ss_pred             CCChhHH-HHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeee
Q 020334           66 LNDPESF-DAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVY  134 (327)
Q Consensus        66 ~~d~~~~-~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~  134 (327)
                      +.+.+.+ .++++++|+||.+.-.                +..-..+-+.|...+  ..+|..++.+-+|
T Consensus        78 i~~~~~~~~~f~~~~DvVi~a~Dn----------------~~aR~~ln~~c~~~~--iplI~~g~~G~~G  129 (234)
T cd01484          78 VGPEQDFNDTFFEQFHIIVNALDN----------------IIARRYVNGMLIFLI--VPLIESGTEGFKG  129 (234)
T ss_pred             CChhhhchHHHHhCCCEEEECCCC----------------HHHHHHHHHHHHHcC--CCEEEEcccCCce
Confidence            7554333 4567889999977531                112244556666666  5688777755443

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.12  E-value=0.038  Score=48.46  Aligned_cols=34  Identities=18%  Similarity=0.204  Sum_probs=27.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC---CeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG---YFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r   37 (327)
                      .+++|.|.||||++|..|++.|.++.   .++..+..
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS   39 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALAS   39 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEc
Confidence            46799999999999999999999853   45655544

>PRK06436 glycerate dehydrogenase; Provisional

Probab=96.12  E-value=0.025  Score=48.94  Aligned_cols=94  Identities=14%  Similarity=0.064  Sum_probs=59.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..++|.|.| .|-||+.+++.|...|.+|++.+|+ ...              .++...      ..++++++.++|+|+
T Consensus       121 ~gktvgIiG-~G~IG~~vA~~l~afG~~V~~~~r~-~~~--------------~~~~~~------~~~l~ell~~aDiv~  178 (303)
T PRK06436        121 YNKSLGILG-YGGIGRRVALLAKAFGMNIYAYTRS-YVN--------------DGISSI------YMEPEDIMKKSDFVL  178 (303)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCC-Ccc--------------cCcccc------cCCHHHHHhhCCEEE
Confidence            468999999 6999999999888889999999983 211              011100      124677888899998


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceee
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTV  133 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~  133 (327)
                      .+.......    . ..+      ....++.+++   ..-||.+|...+.
T Consensus       179 ~~lp~t~~T----~-~li------~~~~l~~mk~---ga~lIN~sRG~~v  214 (303)
T PRK06436        179 ISLPLTDET----R-GMI------NSKMLSLFRK---GLAIINVARADVV  214 (303)
T ss_pred             ECCCCCchh----h-cCc------CHHHHhcCCC---CeEEEECCCcccc
Confidence            887643311    0 111      1344555543   2477777766554

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.12  E-value=0.099  Score=48.22  Aligned_cols=28  Identities=29%  Similarity=0.383  Sum_probs=25.7

Q ss_pred             EeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334           10 VTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus        10 VtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      |+||+|-+|.++++.|...|.+|++..+
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~   70 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANND   70 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCc
Confidence            7888999999999999999999998765

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.11  E-value=0.022  Score=48.99  Aligned_cols=78  Identities=14%  Similarity=0.101  Sum_probs=45.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCC-C-CCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGA-S-ERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      .++++|+|+ |..+++++-.|+..|. +|++++| ++....+...+...... . ..+..  .++.+.+.+.+.+.++|+
T Consensus       124 ~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nR-t~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~~~~~~aDi  199 (288)
T PRK12749        124 GKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNR-RDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAFAEALASADI  199 (288)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeC-CccHHHHHHHHHHHhhhccCceEEE--echhhhhhhhhhcccCCE
Confidence            578999997 6669999999999885 7999999 43211222222111000 0 11222  222222234445667899


Q ss_pred             EEEcc
Q 020334           82 VIHVA   86 (327)
Q Consensus        82 vih~a   86 (327)
                      |||+-
T Consensus       200 vINaT  204 (288)
T PRK12749        200 LTNGT  204 (288)
T ss_pred             EEECC
Confidence            99875

>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []

Probab=96.11  E-value=0.0093  Score=52.11  Aligned_cols=99  Identities=16%  Similarity=0.091  Sum_probs=60.2

Q ss_pred             CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCCCCChhH
Q 020334           78 GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDY  153 (327)
Q Consensus        78 ~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~  153 (327)
                      ++..+|.+-|...............+.-.....|++...    +.+ .+++|.++|...-.                   
T Consensus       203 ~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~-~K~~vIvTSfn~~~-------------------  262 (410)
T PF08732_consen  203 DIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTG-NKKLVIVTSFNNNA-------------------  262 (410)
T ss_pred             hhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCC-CceEEEEEecCcch-------------------
Confidence            346677777766533221111222233333444444444    444 78999999843210                   


Q ss_pred             hhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          154 IRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       154 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                          -....+|-.+|...|+-+.......--..+|+|||.+.|....
T Consensus       263 ----~s~~f~Yfk~K~~LE~dl~~~l~~~l~~lvILRPGplvG~h~~  305 (410)
T PF08732_consen  263 ----ISSMFPYFKTKGELENDLQNLLPPKLKHLVILRPGPLVGEHGS  305 (410)
T ss_pred             ----hhhhhhhhHHHHHHHHHHHhhcccccceEEEecCccccCCCCC
Confidence                0223579999999999888765422247899999999998765

It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.11  E-value=0.014  Score=51.43  Aligned_cols=97  Identities=14%  Similarity=0.028  Sum_probs=60.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..++|.|+|. |-||+.+++.|...|.+|++.+| .+.... ..   .     .++.        ..++.++++++|+|+
T Consensus       149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~-~~~~~~-~~---~-----~~~~--------~~~l~ell~~aDiV~  209 (333)
T PRK13243        149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSR-TRKPEA-EK---E-----LGAE--------YRPLEELLRESDFVS  209 (333)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECC-CCChhh-HH---H-----cCCE--------ecCHHHHHhhCCEEE
Confidence            4689999994 99999999999999999999988 332211 00   0     0111        124667788899998


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceee
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTV  133 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~  133 (327)
                      .+.......    . .     +. -..+++.+++   ..-+|.+|...+.
T Consensus       210 l~lP~t~~T----~-~-----~i-~~~~~~~mk~---ga~lIN~aRg~~v  245 (333)
T PRK13243        210 LHVPLTKET----Y-H-----MI-NEERLKLMKP---TAILVNTARGKVV  245 (333)
T ss_pred             EeCCCChHH----h-h-----cc-CHHHHhcCCC---CeEEEECcCchhc
Confidence            887532210    0 1     11 1234444443   3477888776554

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.10  E-value=0.034  Score=48.08  Aligned_cols=25  Identities=36%  Similarity=0.434  Sum_probs=22.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG   29 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g   29 (327)
                      +++|.|.||||.+|+.+++.|.++.
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~   25 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERH   25 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcC
Confidence            4689999999999999999999964

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.10  E-value=0.05  Score=47.74  Aligned_cols=97  Identities=19%  Similarity=0.115  Sum_probs=59.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHH---HHhc--CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFD---AAIA--GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~---~~~~--~~   79 (327)
                      +.+++|+|++|.+|..+++.+...|++|+++++ +......+   ...     .... ..|..+.+...   ....  ++
T Consensus       167 ~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~---~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~  236 (342)
T cd08266         167 GETVLVHGAGSGVGSAAIQIAKLFGATVIATAG-SEDKLERA---KEL-----GADY-VIDYRKEDFVREVRELTGKRGV  236 (342)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHH---HHc-----CCCe-EEecCChHHHHHHHHHhCCCCC
Confidence            468999999999999999999999999999888 43222222   111     1111 12444433333   2222  58


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS  131 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~  131 (327)
                      |.++++++..          .       ....++.++..   .+++.+|+..
T Consensus       237 d~~i~~~g~~----------~-------~~~~~~~l~~~---G~~v~~~~~~  268 (342)
T cd08266         237 DVVVEHVGAA----------T-------WEKSLKSLARG---GRLVTCGATT  268 (342)
T ss_pred             cEEEECCcHH----------H-------HHHHHHHhhcC---CEEEEEecCC
Confidence            9999998731          0       12334455544   4788887643

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=96.10  E-value=0.018  Score=38.99  Aligned_cols=30  Identities=47%  Similarity=0.576  Sum_probs=28.2

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      +|+|.|| |++|..++..|.+.|.+|+.+.|
T Consensus         1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~   30 (80)
T PF00070_consen    1 RVVVIGG-GFIGIELAEALAELGKEVTLIER   30 (80)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHTTSEEEEEES
T ss_pred             CEEEECc-CHHHHHHHHHHHHhCcEEEEEec
Confidence            5889995 99999999999999999999999

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.09  E-value=0.014  Score=50.81  Aligned_cols=72  Identities=25%  Similarity=0.295  Sum_probs=46.5

Q ss_pred             CCCCC-CeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc
Q 020334            1 MEEQK-GKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         1 m~~~~-~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      |+.++ ++|.|+| +|-+|..+++.|.+.|+  +|++.+| ++.......   ..     ++..   ...  ....+.+.
T Consensus         1 ~~~~~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr-~~~~~~~a~---~~-----g~~~---~~~--~~~~~~~~   65 (307)
T PRK07502          1 MSAPLFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADR-SAETRARAR---EL-----GLGD---RVT--TSAAEAVK   65 (307)
T ss_pred             CCccCCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEEC-CHHHHHHHH---hC-----CCCc---eec--CCHHHHhc
Confidence            55444 7899998 79999999999999884  8999998 433222221   11     1100   011  12344567


Q ss_pred             CCCEEEEccC
Q 020334           78 GCAGVIHVAA   87 (327)
Q Consensus        78 ~~d~vih~a~   87 (327)
                      ++|+||.|..
T Consensus        66 ~aDvViiavp   75 (307)
T PRK07502         66 GADLVILCVP   75 (307)
T ss_pred             CCCEEEECCC
Confidence            8999998875

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.08  E-value=0.007  Score=49.06  Aligned_cols=32  Identities=28%  Similarity=0.267  Sum_probs=29.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      +|+|+|+|. |-+|+++++.|.+.|++|++.++
T Consensus        28 gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~   59 (200)
T cd01075          28 GKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADI   59 (200)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcC
Confidence            578999996 79999999999999999998888

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=96.07  E-value=0.088  Score=43.80  Aligned_cols=34  Identities=29%  Similarity=0.322  Sum_probs=27.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC-CeEE-EEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG-YFVT-TTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~-~~~r   37 (327)
                      +|+||.|.|++|-.|+.+++.+.+.+ .++. +++|
T Consensus         1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~   36 (266)
T COG0289           1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDR   36 (266)
T ss_pred             CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEec
Confidence            36789999999999999999999874 5644 4555

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.07  E-value=0.096  Score=43.40  Aligned_cols=104  Identities=15%  Similarity=0.187  Sum_probs=60.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhh-------------------hhhCCCCCCCCeEEEeC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLS-------------------FLTNLPGASERLQIFNA   64 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~   64 (327)
                      ..+|+|.|. |.+|+++++.|+..|. ++++++.+.-+....-.                   .+... +..-+++.+..
T Consensus        11 ~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~i-nP~~~V~~~~~   88 (231)
T cd00755          11 NAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDI-NPECEVDAVEE   88 (231)
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHH-CCCcEEEEeee
Confidence            568999995 9999999999999985 67777763211110000                   01111 00123444444


Q ss_pred             CCCChhHHHHHhc-CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           65 DLNDPESFDAAIA-GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        65 D~~d~~~~~~~~~-~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      .++ ++.+..++. ++|+||.|....                ..-..|.+.|++.+  ..+|...+
T Consensus        89 ~i~-~~~~~~l~~~~~D~VvdaiD~~----------------~~k~~L~~~c~~~~--ip~I~s~g  135 (231)
T cd00755          89 FLT-PDNSEDLLGGDPDFVVDAIDSI----------------RAKVALIAYCRKRK--IPVISSMG  135 (231)
T ss_pred             ecC-HhHHHHHhcCCCCEEEEcCCCH----------------HHHHHHHHHHHHhC--CCEEEEeC
Confidence            443 445556664 689999886421                12245778888776  45555443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.06  E-value=0.013  Score=51.64  Aligned_cols=38  Identities=32%  Similarity=0.357  Sum_probs=32.3

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE   41 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (327)
                      |.. +|+|.|+| +|-+|+.++..|++.|++|++.+| +++
T Consensus         1 ~~~-~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r-~~~   38 (328)
T PRK14618          1 MHH-GMRVAVLG-AGAWGTALAVLAASKGVPVRLWAR-RPE   38 (328)
T ss_pred             CCC-CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeC-CHH
Confidence            444 45899998 599999999999999999999999 443

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.05  E-value=0.058  Score=47.70  Aligned_cols=32  Identities=22%  Similarity=0.071  Sum_probs=29.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVR   37 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r   37 (327)
                      .+|||+||+|.+|..+++.+...|. +|+++++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~  188 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICG  188 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcC
Confidence            6899999999999999998888898 7999888

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.02  E-value=0.014  Score=53.15  Aligned_cols=70  Identities=23%  Similarity=0.217  Sum_probs=48.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .++|+|+|+ |-+|..+++.|...| .+|++++| ++.+...+...  .     +...     .+.+++.+.+.++|+||
T Consensus       180 ~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~r-s~~ra~~la~~--~-----g~~~-----i~~~~l~~~l~~aDvVi  245 (417)
T TIGR01035       180 GKKALLIGA-GEMGELVAKHLLRKGVGKILIANR-TYERAEDLAKE--L-----GGEA-----VKFEDLEEYLAEADIVI  245 (417)
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeC-CHHHHHHHHHH--c-----CCeE-----eeHHHHHHHHhhCCEEE
Confidence            578999996 999999999999999 78999999 44332222111  0     1111     12345667778899999


Q ss_pred             EccCC
Q 020334           84 HVAAP   88 (327)
Q Consensus        84 h~a~~   88 (327)
                      .+.+.
T Consensus       246 ~aT~s  250 (417)
T TIGR01035       246 SSTGA  250 (417)
T ss_pred             ECCCC
Confidence            98754

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PLN02948 phosphoribosylaminoimidazole carboxylase

Probab=96.01  E-value=0.039  Score=52.32  Aligned_cols=70  Identities=16%  Similarity=0.133  Sum_probs=52.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ++++|+|+|| |++|.-+++.+.+.|++|++++. ++.....  .+        --..+.++..|.+.+.++.+++|+|.
T Consensus        21 ~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~-~~~apa~--~~--------AD~~~v~~~~D~~~l~~~a~~~dvIt   88 (577)
T PLN02948         21 SETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDP-LEDCPAS--SV--------AARHVVGSFDDRAAVREFAKRCDVLT   88 (577)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC-CCCCchh--hh--------CceeeeCCCCCHHHHHHHHHHCCEEE
Confidence            3678999996 89999999999999999999988 4322110  00        11355688999999988888888875


Q ss_pred             Ec
Q 020334           84 HV   85 (327)
Q Consensus        84 h~   85 (327)
                      ..
T Consensus        89 ~e   90 (577)
T PLN02948         89 VE   90 (577)
T ss_pred             Ee
Confidence            43

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.99  E-value=0.044  Score=44.47  Aligned_cols=70  Identities=17%  Similarity=0.271  Sum_probs=45.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+++|||+|| |-+|...++.|++.|++|+++.+ ..  ...+..+...    ..+.+..-++.     ...+.++|.||
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~-~~--~~~l~~l~~~----~~i~~~~~~~~-----~~~l~~adlVi   75 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISP-EL--TENLVKLVEE----GKIRWKQKEFE-----PSDIVDAFLVI   75 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcC-CC--CHHHHHHHhC----CCEEEEecCCC-----hhhcCCceEEE
Confidence            4689999997 99999999999999999998876 22  2222222211    24555443332     22356778877


Q ss_pred             Ecc
Q 020334           84 HVA   86 (327)
Q Consensus        84 h~a   86 (327)
                      -+.
T Consensus        76 aaT   78 (202)
T PRK06718         76 AAT   78 (202)
T ss_pred             EcC
Confidence            543

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.99  E-value=0.014  Score=43.32  Aligned_cols=35  Identities=26%  Similarity=0.337  Sum_probs=28.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDP   40 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (327)
                      .++|-|+|+ |-+|.+|.+.|.+.|++|..+..++.
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~   44 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSP   44 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCc
Confidence            468999997 99999999999999999988754243

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.99  E-value=0.12  Score=46.70  Aligned_cols=109  Identities=13%  Similarity=0.122  Sum_probs=65.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcch----------h---------hhhhCCCCCCCCeEEEeC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKD----------L---------SFLTNLPGASERLQIFNA   64 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~----------~---------~~~~~~~~~~~~~~~~~~   64 (327)
                      ..+|+|.|+ |.+|++++..|+..|. ++++++.+.-+....          +         ..+.+. +..-+++.+..
T Consensus        42 ~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~-np~v~i~~~~~  119 (392)
T PRK07878         42 NARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEI-NPLVNVRLHEF  119 (392)
T ss_pred             cCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHh-CCCcEEEEEec
Confidence            568999995 9999999999999985 577776632111000          0         011111 10123444555


Q ss_pred             CCCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeee
Q 020334           65 DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVY  134 (327)
Q Consensus        65 D~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~  134 (327)
                      .+. .+...++++++|+||.|...       ..         .-..+-++|++.+  +.+|+.+....+|
T Consensus       120 ~i~-~~~~~~~~~~~D~Vvd~~d~-------~~---------~r~~ln~~~~~~~--~p~v~~~~~g~~G  170 (392)
T PRK07878        120 RLD-PSNAVELFSQYDLILDGTDN-------FA---------TRYLVNDAAVLAG--KPYVWGSIYRFEG  170 (392)
T ss_pred             cCC-hhHHHHHHhcCCEEEECCCC-------HH---------HHHHHHHHHHHcC--CCEEEEEeccCEE
Confidence            554 34566778899999987531       11         1233566777776  5688887766655

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.98  E-value=0.0074  Score=51.79  Aligned_cols=72  Identities=24%  Similarity=0.259  Sum_probs=46.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhh-hhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSF-LTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      .++++|+|+ |..|++++..|++.|. +|++++| +..+...+.. +...   .+.......     +.+.+.+.++|+|
T Consensus       127 ~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR-~~~ka~~la~~l~~~---~~~~~~~~~-----~~~~~~~~~aDiV  196 (284)
T PRK12549        127 LERVVQLGA-GGAGAAVAHALLTLGVERLTIFDV-DPARAAALADELNAR---FPAARATAG-----SDLAAALAAADGL  196 (284)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECC-CHHHHHHHHHHHHhh---CCCeEEEec-----cchHhhhCCCCEE
Confidence            468999996 8899999999999997 7999999 5444433322 1111   011222211     2234456789999


Q ss_pred             EEcc
Q 020334           83 IHVA   86 (327)
Q Consensus        83 ih~a   86 (327)
                      |++.
T Consensus       197 InaT  200 (284)
T PRK12549        197 VHAT  200 (284)
T ss_pred             EECC
Confidence            9994

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.98  E-value=0.11  Score=46.20  Aligned_cols=74  Identities=16%  Similarity=0.154  Sum_probs=45.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHH-HHHhcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESF-DAAIAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~-~~~~~~~d~vi   83 (327)
                      ..+|+|+|+ |-+|...++.+...|.+|++++|+. ....++......     ++..+  |..+.+.. .....++|+||
T Consensus       173 g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~-~~~~~~~~~~~~-----Ga~~v--~~~~~~~~~~~~~~~~d~vi  243 (355)
T cd08230         173 PRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRD-PPDPKADIVEEL-----GATYV--NSSKTPVAEVKLVGEFDLII  243 (355)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHc-----CCEEe--cCCccchhhhhhcCCCCEEE
Confidence            568999985 9999999988888899999999832 122222222222     23332  22221100 11224689999


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      .+.|
T Consensus       244 d~~g  247 (355)
T cd08230         244 EATG  247 (355)
T ss_pred             ECcC
Confidence            9987

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.97  E-value=0.04  Score=43.84  Aligned_cols=78  Identities=12%  Similarity=0.032  Sum_probs=50.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCC-hhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLND-PESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~d~v   82 (327)
                      .+|+|+|+|-|.-+|+.|+..|+++|..|+..+. +.......         ............| ...+.+.++++|+|
T Consensus        61 ~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~-~~~~~~~~---------~~~~~hs~t~~~~~~~~l~~~~~~ADIV  130 (197)
T cd01079          61 YGKTITIINRSEVVGRPLAALLANDGARVYSVDI-NGIQVFTR---------GESIRHEKHHVTDEEAMTLDCLSQSDVV  130 (197)
T ss_pred             CCCEEEEECCCccchHHHHHHHHHCCCEEEEEec-Cccccccc---------ccccccccccccchhhHHHHHhhhCCEE
Confidence            4789999999999999999999999999998865 21110000         0000000111112 22366788899999


Q ss_pred             EEccCCCCC
Q 020334           83 IHVAAPIDI   91 (327)
Q Consensus        83 ih~a~~~~~   91 (327)
                      |-++|...+
T Consensus       131 IsAvG~~~~  139 (197)
T cd01079         131 ITGVPSPNY  139 (197)
T ss_pred             EEccCCCCC
Confidence            999886554

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.97  E-value=0.016  Score=50.58  Aligned_cols=71  Identities=20%  Similarity=0.156  Sum_probs=48.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ..++|+|+|+ |-+|..+++.|...| .+|++++| ++.+...+....       +..     ..+.+++.+.+.++|+|
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r-~~~ra~~la~~~-------g~~-----~~~~~~~~~~l~~aDvV  242 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANR-TYERAEELAKEL-------GGN-----AVPLDELLELLNEADVV  242 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeC-CHHHHHHHHHHc-------CCe-----EEeHHHHHHHHhcCCEE
Confidence            3678999996 999999999999866 67888998 543332221110       111     22334566777889999


Q ss_pred             EEccCC
Q 020334           83 IHVAAP   88 (327)
Q Consensus        83 ih~a~~   88 (327)
                      |.+.+.
T Consensus       243 i~at~~  248 (311)
T cd05213         243 ISATGA  248 (311)
T ss_pred             EECCCC
Confidence            988874

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=95.96  E-value=0.024  Score=51.60  Aligned_cols=35  Identities=17%  Similarity=0.237  Sum_probs=29.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH   42 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   42 (327)
                      +|+|.|+| .|++|..++..|++ |++|+++++ ++.+
T Consensus         6 ~mkI~vIG-lGyvGlpmA~~la~-~~~V~g~D~-~~~~   40 (425)
T PRK15182          6 EVKIAIIG-LGYVGLPLAVEFGK-SRQVVGFDV-NKKR   40 (425)
T ss_pred             CCeEEEEC-cCcchHHHHHHHhc-CCEEEEEeC-CHHH
Confidence            46899998 79999999999877 699999999 5433

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=95.96  E-value=0.016  Score=50.00  Aligned_cols=74  Identities=22%  Similarity=0.230  Sum_probs=50.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEe-----CCCCChhHHHHHhcCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN-----ADLNDPESFDAAIAGC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~D~~d~~~~~~~~~~~   79 (327)
                      +++|.|+|| |--|++|+..|+++|++|..-.| +++....+..-      ..+.+++.     ..+.-..++.++++++
T Consensus         1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r-~~~~~~~i~~~------~~N~~yLp~i~lp~~l~at~Dl~~a~~~a   72 (329)
T COG0240           1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGR-DEEIVAEINET------RENPKYLPGILLPPNLKATTDLAEALDGA   72 (329)
T ss_pred             CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEec-CHHHHHHHHhc------CcCccccCCccCCcccccccCHHHHHhcC
Confidence            467999996 99999999999999999999999 54333332211      12333333     2222234677888889


Q ss_pred             CEEEEcc
Q 020334           80 AGVIHVA   86 (327)
Q Consensus        80 d~vih~a   86 (327)
                      |+|+-..
T Consensus        73 d~iv~av   79 (329)
T COG0240          73 DIIVIAV   79 (329)
T ss_pred             CEEEEEC
Confidence            9998554

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=95.95  E-value=0.014  Score=49.63  Aligned_cols=35  Identities=29%  Similarity=0.351  Sum_probs=30.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC---CeEEEEEcCCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG---YFVTTTVRSDP   40 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~   40 (327)
                      ||++|.|+|+ |-+|+.+++.|.+.|   ++|++.+| ++
T Consensus         1 ~mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r-~~   38 (267)
T PRK11880          1 MMKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDP-SP   38 (267)
T ss_pred             CCCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcC-CH
Confidence            4678999995 999999999999988   78999988 44

>PRK08818 prephenate dehydrogenase; Provisional

Probab=95.95  E-value=0.024  Score=50.37  Aligned_cols=33  Identities=24%  Similarity=0.283  Sum_probs=30.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r   37 (327)
                      .++|+|+|.+|.+|..+++.|.+. +++|+++++
T Consensus         4 ~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~   37 (370)
T PRK08818          4 QPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDP   37 (370)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcC
Confidence            578999999999999999999975 889999888

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.93  E-value=0.016  Score=52.87  Aligned_cols=71  Identities=23%  Similarity=0.268  Sum_probs=49.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ..++|+|+|+ |-+|..+++.|...|. +|++.+| ++.+...+...  .     +     ++..+.+++.+.+.++|+|
T Consensus       181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r-~~~ra~~la~~--~-----g-----~~~~~~~~~~~~l~~aDvV  246 (423)
T PRK00045        181 SGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANR-TLERAEELAEE--F-----G-----GEAIPLDELPEALAEADIV  246 (423)
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeC-CHHHHHHHHHH--c-----C-----CcEeeHHHHHHHhccCCEE
Confidence            3578999996 9999999999999997 7888988 54333222111  0     1     1222335566677889999


Q ss_pred             EEccCC
Q 020334           83 IHVAAP   88 (327)
Q Consensus        83 ih~a~~   88 (327)
                      |.+.+.
T Consensus       247 I~aT~s  252 (423)
T PRK00045        247 ISSTGA  252 (423)
T ss_pred             EECCCC
Confidence            988764

>PRK07574 formate dehydrogenase; Provisional

Probab=95.93  E-value=0.036  Score=49.56  Aligned_cols=99  Identities=20%  Similarity=0.139  Sum_probs=60.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..++|.|+| .|-||+.+++.|...|.+|++.+|.. ........        .+++.       ..+++++++++|+|+
T Consensus       191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~-~~~~~~~~--------~g~~~-------~~~l~ell~~aDvV~  253 (385)
T PRK07574        191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHR-LPEEVEQE--------LGLTY-------HVSFDSLVSVCDVVT  253 (385)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCC-CchhhHhh--------cCcee-------cCCHHHHhhcCCEEE
Confidence            367899999 59999999999999999999999832 11111000        11111       234777888999998


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceee
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTV  133 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~  133 (327)
                      .+.....        ++.  ++. -..++..+++   ..-||.+|...+.
T Consensus       254 l~lPlt~--------~T~--~li-~~~~l~~mk~---ga~lIN~aRG~iV  289 (385)
T PRK07574        254 IHCPLHP--------ETE--HLF-DADVLSRMKR---GSYLVNTARGKIV  289 (385)
T ss_pred             EcCCCCH--------HHH--HHh-CHHHHhcCCC---CcEEEECCCCchh
Confidence            7776432        111  111 1344455543   2467777765544

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.92  E-value=0.017  Score=44.55  Aligned_cols=69  Identities=20%  Similarity=0.247  Sum_probs=43.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..|+++|+| -|.+|+.+++.|...|.+|++..+ +|-..-  +..      ..+++..        .+.+++...|+||
T Consensus        22 ~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~-DPi~al--qA~------~dGf~v~--------~~~~a~~~adi~v   83 (162)
T PF00670_consen   22 AGKRVVVIG-YGKVGKGIARALRGLGARVTVTEI-DPIRAL--QAA------MDGFEVM--------TLEEALRDADIFV   83 (162)
T ss_dssp             TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-S-SHHHHH--HHH------HTT-EEE---------HHHHTTT-SEEE
T ss_pred             CCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEEC-ChHHHH--Hhh------hcCcEec--------CHHHHHhhCCEEE
Confidence            368899999 599999999999999999999988 542221  111      1344432        2566788889988


Q ss_pred             EccCCCC
Q 020334           84 HVAAPID   90 (327)
Q Consensus        84 h~a~~~~   90 (327)
                      .+.|..+
T Consensus        84 taTG~~~   90 (162)
T PF00670_consen   84 TATGNKD   90 (162)
T ss_dssp             E-SSSSS
T ss_pred             ECCCCcc
Confidence            7777543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.92  E-value=0.046  Score=48.00  Aligned_cols=63  Identities=21%  Similarity=0.184  Sum_probs=45.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..++|.|+| .|-||+.+++.|...|++|++.+| .+....            ..+.     .  ..++.++++++|+|+
T Consensus       145 ~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~-~~~~~~------------~~~~-----~--~~~l~ell~~aDiVi  203 (330)
T PRK12480        145 KNMTVAIIG-TGRIGAATAKIYAGFGATITAYDA-YPNKDL------------DFLT-----Y--KDSVKEAIKDADIIS  203 (330)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeC-ChhHhh------------hhhh-----c--cCCHHHHHhcCCEEE
Confidence            357899999 599999999999999999999998 332110            0001     1  124667888899888


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      -+..
T Consensus       204 l~lP  207 (330)
T PRK12480        204 LHVP  207 (330)
T ss_pred             EeCC
Confidence            7664

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.91  E-value=0.069  Score=43.44  Aligned_cols=69  Identities=19%  Similarity=0.264  Sum_probs=49.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+++|||.|| |-+|..-++.|++.|.+|++++. ..  ...+..+..    ..+++++..+... +    .+.+++.||
T Consensus         8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp-~~--~~~l~~l~~----~~~i~~~~~~~~~-~----dl~~~~lVi   74 (205)
T TIGR01470         8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAE-EL--ESELTLLAE----QGGITWLARCFDA-D----ILEGAFLVI   74 (205)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcC-CC--CHHHHHHHH----cCCEEEEeCCCCH-H----HhCCcEEEE
Confidence            4689999996 99999999999999999998866 32  233333322    1478888888762 2    256778777


Q ss_pred             Ec
Q 020334           84 HV   85 (327)
Q Consensus        84 h~   85 (327)
                      -+
T Consensus        75 ~a   76 (205)
T TIGR01470        75 AA   76 (205)
T ss_pred             EC
Confidence            44

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>KOG1495 consensus Lactate dehydrogenase [Energy production and conversion]

Probab=95.91  E-value=0.23  Score=41.36  Aligned_cols=114  Identities=18%  Similarity=0.157  Sum_probs=72.1

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEe-CCCCChhHHHHHhcCCCE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFN-ADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~-~D~~d~~~~~~~~~~~d~   81 (327)
                      .||-|.| .|.+|.+.+..++.+|  .++..++- ..++.+ ....+++-..-...-+... .|....       .+.+.
T Consensus        21 ~KItVVG-~G~VGmAca~siL~k~Ladel~lvDv-~~dklkGE~MDLqH~s~f~~~~~V~~~~Dy~~s-------a~S~l   91 (332)
T KOG1495|consen   21 NKITVVG-VGQVGMACAISILLKGLADELVLVDV-NEDKLKGEMMDLQHGSAFLSTPNVVASKDYSVS-------ANSKL   91 (332)
T ss_pred             ceEEEEc-cchHHHHHHHHHHHhhhhhceEEEec-CcchhhhhhhhhccccccccCCceEecCccccc-------CCCcE
Confidence            4799999 4999999999998886  57777777 433221 1111111000011112222 244322       25688


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      ||-.||.-....+... ...+.||...+.++..+.++.+...++.+|-
T Consensus        92 vIiTAGarq~~gesRL-~lvQrNV~ifK~iip~lv~ySpd~~llvvSN  138 (332)
T KOG1495|consen   92 VIITAGARQSEGESRL-DLVQRNVDIFKAIIPALVKYSPDCILLVVSN  138 (332)
T ss_pred             EEEecCCCCCCCcHHH-HHHHHHHHHHHHHHHHHhhcCCCeEEEEecC
Confidence            9989986444344444 8899999999999999999886667777774

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.90  E-value=0.041  Score=41.68  Aligned_cols=56  Identities=20%  Similarity=0.176  Sum_probs=45.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+++|+|.|.+.-+|..|+..|.++|.+|+...++.                              .++.+.++++|+||
T Consensus        27 ~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t------------------------------~~l~~~v~~ADIVv   76 (140)
T cd05212          27 DGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT------------------------------IQLQSKVHDADVVV   76 (140)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC------------------------------cCHHHHHhhCCEEE
Confidence            478999999999999999999999999998886611                              12455677889999


Q ss_pred             EccCCC
Q 020334           84 HVAAPI   89 (327)
Q Consensus        84 h~a~~~   89 (327)
                      -+.+..
T Consensus        77 sAtg~~   82 (140)
T cd05212          77 VGSPKP   82 (140)
T ss_pred             EecCCC
Confidence            887754

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.89  E-value=0.083  Score=43.29  Aligned_cols=108  Identities=19%  Similarity=0.284  Sum_probs=66.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhC----------------CCCCCCCeEEEe-CCCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTN----------------LPGASERLQIFN-ADLN   67 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~----------------~~~~~~~~~~~~-~D~~   67 (327)
                      .+|+|.|. |.+|++.+++|++.|. +++.++-++-.-...-.++..                .....+..+... -|..
T Consensus        31 ~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f~  109 (263)
T COG1179          31 AHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDFI  109 (263)
T ss_pred             CcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhhh
Confidence            47999995 9999999999999985 567666632211111111100                011123444433 4455


Q ss_pred             ChhHHHHHhc-CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeee
Q 020334           68 DPESFDAAIA-GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVY  134 (327)
Q Consensus        68 d~~~~~~~~~-~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~  134 (327)
                      +++.+.+++. ++|+||.+.-                |+..-..|+..|++++ .   -++||+++-+
T Consensus       110 t~en~~~~~~~~~DyvIDaiD----------------~v~~Kv~Li~~c~~~k-i---~vIss~Gag~  157 (263)
T COG1179         110 TEENLEDLLSKGFDYVIDAID----------------SVRAKVALIAYCRRNK-I---PVISSMGAGG  157 (263)
T ss_pred             CHhHHHHHhcCCCCEEEEchh----------------hhHHHHHHHHHHHHcC-C---CEEeeccccC
Confidence            7777877775 6899998753                1334568899999876 3   4557766543

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=95.87  E-value=0.019  Score=49.65  Aligned_cols=65  Identities=23%  Similarity=0.244  Sum_probs=44.7

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      ++|.|+| .|.+|..+++.|++.|++|++.+| ++.....+.   ..     ++.       ...+..++++++|+||-|
T Consensus         2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~-~~~~~~~~~---~~-----g~~-------~~~s~~~~~~~aDvVi~~   64 (296)
T PRK15461          2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDV-NPQAVDALV---DK-----GAT-------PAASPAQAAAGAEFVITM   64 (296)
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcC-CHHHHHHHH---Hc-----CCc-------ccCCHHHHHhcCCEEEEe
Confidence            4799998 699999999999999999999999 443332221   11     111       112334566778988877


Q ss_pred             cC
Q 020334           86 AA   87 (327)
Q Consensus        86 a~   87 (327)
                      ..
T Consensus        65 vp   66 (296)
T PRK15461         65 LP   66 (296)
T ss_pred             cC
Confidence            64

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.86  E-value=0.09  Score=48.41  Aligned_cols=79  Identities=20%  Similarity=0.185  Sum_probs=52.9

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      |+...++|+|+|+ |-.|.++++.|.++|++|.+.+. .+... ....+...   ..++.+..+...+     ..+.++|
T Consensus         1 ~~~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~-~~~~~-~~~~l~~~---~~gi~~~~g~~~~-----~~~~~~d   69 (445)
T PRK04308          1 MTFQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDA-ELKPE-RVAQIGKM---FDGLVFYTGRLKD-----ALDNGFD   69 (445)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC-CCCch-hHHHHhhc---cCCcEEEeCCCCH-----HHHhCCC
Confidence            6666789999997 68999999999999999999987 33221 11222110   1256666555321     1345789


Q ss_pred             EEEEccCCCC
Q 020334           81 GVIHVAAPID   90 (327)
Q Consensus        81 ~vih~a~~~~   90 (327)
                      .||...|...
T Consensus        70 ~vv~spgi~~   79 (445)
T PRK04308         70 ILALSPGISE   79 (445)
T ss_pred             EEEECCCCCC
Confidence            9999888653

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.84  E-value=0.048  Score=42.31  Aligned_cols=32  Identities=34%  Similarity=0.417  Sum_probs=29.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTV   36 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~   36 (327)
                      .+++|+|.|| |-+|...++.|++.|++|++++
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs   43 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS   43 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence            3689999996 9999999999999999999884

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.82  E-value=0.064  Score=45.32  Aligned_cols=97  Identities=21%  Similarity=0.154  Sum_probs=58.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH--h--cCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA--I--AGCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~--~--~~~d   80 (327)
                      ..+|+|+|+++ +|..+++.+...|.+|+++++ ++.....+..+       .....  .|..+......+  .  ..+|
T Consensus       135 ~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~~-------g~~~~--~~~~~~~~~~~~~~~~~~~~d  203 (271)
T cd05188         135 GDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDR-SDEKLELAKEL-------GADHV--IDYKEEDLEEELRLTGGGGAD  203 (271)
T ss_pred             CCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcC-CHHHHHHHHHh-------CCcee--ccCCcCCHHHHHHHhcCCCCC
Confidence            56899999999 999999999999999999988 43322222211       01111  222222222221  1  3689


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS  131 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~  131 (327)
                      +++++++..                .....+++.++..+   +++.+++..
T Consensus       204 ~vi~~~~~~----------------~~~~~~~~~l~~~G---~~v~~~~~~  235 (271)
T cd05188         204 VVIDAVGGP----------------ETLAQALRLLRPGG---RIVVVGGTS  235 (271)
T ss_pred             EEEECCCCH----------------HHHHHHHHhcccCC---EEEEEccCC
Confidence            999988731                11334555555444   788777643

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=95.81  E-value=0.072  Score=45.92  Aligned_cols=31  Identities=23%  Similarity=0.238  Sum_probs=25.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC-CeEEEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTV   36 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~   36 (327)
                      .+|.|.|||||.|..|++.|.+.. .++..+.
T Consensus         2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~   33 (310)
T TIGR01851         2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIA   33 (310)
T ss_pred             CeEEEECCCChhHHHHHHHHhCCCCeEEEEEe
Confidence            479999999999999999999874 4555553

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein

Probab=95.80  E-value=0.069  Score=49.92  Aligned_cols=107  Identities=17%  Similarity=0.245  Sum_probs=67.2

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcC-CCCCcchhhhhhCCCCC-CCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRS-DPEHKKDLSFLTNLPGA-SERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~-~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      .||+|.| +|.+|++++..|+..|. ++.+++-+ ......++.++...... .+++.+-..|....+++.+.+++.|+|
T Consensus       130 akVlVlG-~Gg~~s~lv~sL~~sG~~~I~~vd~D~v~SNlnRIgEl~e~A~~~n~~v~v~~i~~~~~~dl~ev~~~~DiV  208 (637)
T TIGR03693       130 AKILAAG-SGDFLTKLVRSLIDSGFPRFHAIVTDAEEHALDRIHELAEIAEETDDALLVQEIDFAEDQHLHEAFEPADWV  208 (637)
T ss_pred             ccEEEEe-cCchHHHHHHHHHhcCCCcEEEEeccccchhhhHHHHHHHHHHHhCCCCceEeccCCcchhHHHhhcCCcEE
Confidence            5799999 58999999999999995 56566442 22222222232111111 345656556667788899999999999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      ++.+--...              .....+.++|.+.+ ...+..+.
T Consensus       209 i~vsDdy~~--------------~~Lr~lN~acvkeg-k~~IPai~  239 (637)
T TIGR03693       209 LYVSDNGDI--------------DDLHALHAFCKEEG-KGFIPAIC  239 (637)
T ss_pred             EEECCCCCh--------------HHHHHHHHHHHHcC-CCeEEEEE
Confidence            988753221              11456667777766 33444333

Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=95.80  E-value=0.024  Score=54.31  Aligned_cols=72  Identities=24%  Similarity=0.331  Sum_probs=56.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi   83 (327)
                      .++|+|.|. |-+|+.+++.|.++|+++++++. +++.....+   +     .+...+.||.+|++.++++ +++++.||
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~-d~~~v~~~~---~-----~g~~v~~GDat~~~~L~~agi~~A~~vv  469 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDH-DPDHIETLR---K-----FGMKVFYGDATRMDLLESAGAAKAEVLI  469 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEEC-CHHHHHHHH---h-----cCCeEEEEeCCCHHHHHhcCCCcCCEEE
Confidence            357999995 99999999999999999999999 554433332   1     3678899999999988753 45788888


Q ss_pred             Ecc
Q 020334           84 HVA   86 (327)
Q Consensus        84 h~a   86 (327)
                      -+.
T Consensus       470 v~~  472 (621)
T PRK03562        470 NAI  472 (621)
T ss_pred             EEe
Confidence            664

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	327
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		1e-106
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		4e-74
2rh8_A	338	Structure Of Apo Anthocyanidin Reductase From Vitis		6e-57
1y1p_A	342	X-Ray Structure Of Aldehyde Reductase With Nadph Le		9e-17
1ujm_A	342	Crystal Structure Of Aldehyde Reductase 2 From Spor		6e-16
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		4e-06
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		6e-06
4f6l_B	508	Crystal Structure Of Aureusimine Biosynthetic Clust		2e-05
2hun_A	336	Crystal Structure Of Hypothetical Protein Ph0414 Fr		6e-05
3ehe_A	313	Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-		6e-05
3enk_A	341	1.9a Crystal Structure Of Udp-Glucose 4-Epimerase F		3e-04
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		3e-04
4f6c_A	427	Crystal Structure Of Aureusimine Biosynthetic Clust		5e-04
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		8e-04
3dhn_A	227	Crystal Structure Of The Putative Epimerase Q89z24_		9e-04

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score =  380 bits (975), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 180/323 (55%), Positives = 237/323 (73%), Gaps = 1/323 (0%)
Query: 5   KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA 64
           KG+VCVTGGTGF+GSW+I  LL++GY V TT+R+DPE K+D+SFLTNLPGASE+L  FNA
Sbjct: 1   KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNA 60
Query: 65  DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRF 124
           DL++P+SF AAI GC G+ H A+PID    E EE++T+R V+G +GILK+C+ S TVKRF
Sbjct: 61  DLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRF 120
Query: 125 VYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGL 184
           +YTSSGS V F+GKD D+LDE+ WSD D +R +  +G +Y ++KTL E+A LEF E++G+
Sbjct: 121 IYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGI 180
Query: 185 DLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLE 244
           D+VTLI  F+VG F+CPK   S+   L +VLG +E+  +     MVH+DDVARAHI+LLE
Sbjct: 181 DVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGV-TRFHMVHVDDVARAHIYLLE 239
Query: 245 YPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYXXXXXXXXXXXDICF 304
                GRY CS   + I+EM++ LSAK+PEY I  VD L EI+G            D  F
Sbjct: 240 NSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGARLPDLNTKKLVDAGF 299
Query: 305 TYKYGIDEMFDGAIKCCKERGYL 327
            +KY I++MFD AI+CCKE+GYL
Sbjct: 300 DFKYTIEDMFDDAIQCCKEKGYL 322

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score =  275 bits (702), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 140/331 (42%), Positives = 197/331 (59%), Gaps = 10/331 (3%)
Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           M  Q   VCVTG +GFIGSWL+MRLL+ GY V  TVR DP + K +  L +LP A   L 
Sbjct: 1   MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVR-DPTNVKKVKHLLDLPKAETHLT 59
Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           ++ ADL D  SFD AI GC GV HVA P+D + K+ E  + +  + G +GI+KSC  + T
Sbjct: 60  LWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKT 119
Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           V+R V+TSS  TV      + + DE+ WSD ++ R   +    Y ++KTL E+AA ++A+
Sbjct: 120 VRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAK 179
Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI 240
           E+ +D +T+IP+ VVGPFI      S+ + L+ + GN   YSI+     VH+DD+  AHI
Sbjct: 180 ENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHI 239
Query: 241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPN----VDSLSEIEGYXXXXXXX 296
           +L E P A+GRYICSS    I ++A+ L  K+PEY IP     VD     E         
Sbjct: 240 YLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVD-----ENLKSVCFSS 294
Query: 297 XXXXDICFTYKYGIDEMFDGAIKCCKERGYL 327
               D+ F +KY +++MF GA+  C+ +G L
Sbjct: 295 KKLTDLGFEFKYSLEDMFTGAVDTCRAKGLL 325

>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338

Iteration: 1
 Score =  217 bits (553), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 122/338 (36%), Positives = 192/338 (56%), Gaps = 25/338 (7%)
Query: 5   KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA 64
           K   CV GGTGF+ S L+  LL  GY V TTVR DP+++K +S L  L    + L+IF A
Sbjct: 9   KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVR-DPDNQKKVSHLLELQELGD-LKIFRA 66
Query: 65  DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRF 124
           DL D  SF+A IAGC  V HVA P+    ++ E  M + A+ G + ++K+C ++ +VKR 
Sbjct: 67  DLTDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRV 126
Query: 125 VYTSSGSTVYFSGKDVD--MLDETFWSDEDYIR--KLDIWGKSYVLTKTLTERAALEFAE 180
           + TSS + V  +  D    ++DE  W+D +++   K   WG  Y  +KTL E+AA +FAE
Sbjct: 127 ILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWG--YPASKTLAEKAAWKFAE 184
Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN-----------ISM 229
           E+ +DL+T+IP+ + G  +      S+   ++++ GN      L+N           +S+
Sbjct: 185 ENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNE----FLINGMKGMQMLSGSVSI 240
Query: 230 VHIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGY 289
            H++DV RAHIF+ E   A GRYIC +A  ++ E+A+FLS ++P+Y +P      +    
Sbjct: 241 AHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPT--DFGDFPPK 298
Query: 290 XXXXXXXXXXXDICFTYKYGIDEMFDGAIKCCKERGYL 327
                         F++KYGI+E++D +++  K +G L
Sbjct: 299 SKLIISSEKLVKEGFSFKYGIEEIYDESVEYFKAKGLL 336

>pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342

Iteration: 1
 Score = 84.3 bits (207), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 125/274 (45%), Gaps = 37/274 (13%)
Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNL--------PGASERL 59
           V VTG  GF+ S ++ +LL+HGY V  T RS        S L NL        PG  E  
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTARS-------ASKLANLQKRWDAKYPGRFETA 66
Query: 60  QIFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG 119
            +   D+    ++D  I G AGV H+A+ +    K  +EV+T  A+ GT+  L++   + 
Sbjct: 67  VV--EDMLKQGAYDEVIKGAAGVAHIASVVSFSNK-YDEVVTP-AIGGTLNALRAAAATP 122
Query: 120 TVKRFVYTSSGSTVYFSGKDVD--MLDETFWSDE--DYIRKL-------DIWGKSYVLTK 168
           +VKRFV TSS  +      +V+   LDE  W+ E  D  + L        +W   Y  +K
Sbjct: 123 SVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLW--VYAASK 180
Query: 169 TLTERAALEFAEEHG--LDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNRE---EYSI 223
           T  E AA +F +E+     L  ++P++ +G    P+      S   M L N E     ++
Sbjct: 181 TEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALAL 240
Query: 224 LLNISMVHIDDVARAHIFLLEYPDAKGRYICSSA 257
           +     V   D+   H+  L  P  + R +  +A
Sbjct: 241 MPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTA 274

>pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 119/259 (45%), Gaps = 49/259 (18%)
Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNL--------PGASERL 59
           V VTG  GF+ S ++ +LL+HGY V  T RS        S L NL        PG  E  
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTARS-------ASKLANLQKRWDAKYPGRFETA 66
Query: 60  QIFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG 119
            +   D     ++D  I G AGV H+A+ +    K  +EV+T  A+ GT+  L++   + 
Sbjct: 67  VV--EDXLKQGAYDEVIKGAAGVAHIASVVSFSNK-YDEVVTP-AIGGTLNALRAAAATP 122
Query: 120 TVKRFVYTSSGSTVYFSGKDVD--MLDETFWSDE--DYIRKL-------DIWGKSYVLTK 168
           +VKRFV TSS  +      +V+   LDE  W+ E  D  + L        +W   Y  +K
Sbjct: 123 SVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLW--VYAASK 180
Query: 169 TLTERAALEFAEEHG--LDLVTLIPSFVVGPFICPK-------------FAGSVRSTLAM 213
           T  E AA +F +E+     L  ++P++ +G    P+             F G V   LA 
Sbjct: 181 TEAELAAWKFXDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWXXSLFNGEVSPALA- 239
Query: 214 VLGNREEYSILLNISMVHI 232
            L   + Y   ++I ++H+
Sbjct: 240 -LXPPQYYVSAVDIGLLHL 257

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 112/275 (40%), Gaps = 32/275 (11%)
Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPG-----ASERLQ 60
           ++ VTGG GFIGS  + +LL   Y     V +D     D L++  N        A  RL+
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAY---PDVPADEVIVLDSLTYAGNRANLAPVDADPRLR 58
Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGK-ETEEVMTQRAVNGTIGILKSCLKSG 119
             + D+ D       + G   ++H AA   +D       V T+  V GT  +L+  + +G
Sbjct: 59  FVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG 118
Query: 120 TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFA 179
            V R V+ S+ + VY S      +D   W++   +         Y  +K  ++  A  + 
Sbjct: 119 -VGRVVHVST-NQVYGS------IDSGSWTESSPLEP----NSPYAASKAGSDLVARAYH 166
Query: 180 EEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNI-SMVHIDDVARA 238
             +GLD+         GP+  P+    +  T  +  G    Y    N+   VH DD  R 
Sbjct: 167 RTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRG 226
Query: 239 HIFLLEYPDAKGR-----YICSSAKLTIQEMAEFL 268
              +L    A GR     +I    +LT +E+   L
Sbjct: 227 IALVL----AGGRAGEIYHIGGGLELTNRELTGIL 257

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 111/275 (40%), Gaps = 32/275 (11%)
Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPG-----ASERLQ 60
           ++ VTGG GFIGS  + +LL   Y     V +D     D L++  N        A  RL+
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAY---PDVPADEVIVLDSLTYAGNRANLAPVDADPRLR 58
Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGK-ETEEVMTQRAVNGTIGILKSCLKSG 119
             + D+ D       + G   ++H AA   +D       V T+  V GT  +L+  + +G
Sbjct: 59  FVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG 118
Query: 120 TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFA 179
            V R V+ S+   VY S      +D   W++   +         Y  +K  ++  A  + 
Sbjct: 119 -VGRVVHVST-DEVYGS------IDSGSWTESSPLEP----NSPYAASKAGSDLVARAYH 166
Query: 180 EEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNI-SMVHIDDVARA 238
             +GLD+         GP+  P+    +  T  +  G    Y    N+   VH DD  R 
Sbjct: 167 RTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRG 226
Query: 239 HIFLLEYPDAKGR-----YICSSAKLTIQEMAEFL 268
              +L    A GR     +I    +LT +E+   L
Sbjct: 227 IALVL----AGGRAGEIYHIGGGLELTNRELTGIL 257

>pdb|4F6L|B Chain B, Crystal Structure Of Aureusimine Biosynthetic Cluster Reductase Domain Length = 508

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 6   GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPG--ASERLQIFN 63
           G   +TG TGF+G++LI  L  + + +   +R+D E       +TNL    + E +++  
Sbjct: 151 GNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMML 210
Query: 64  ADLN----DPESFDAAI--AGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLK 117
           +++     D E  D  +       +IH  A  D  G + E    +  V GT+ +++  L 
Sbjct: 211 SNIEVIVGDFECMDDVVLPENMDTIIHAGARTDHFGDDDE--FEKVNVQGTVDVIR--LA 266
Query: 118 SGTVKRFVYTSSGST-VYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAAL 176
                R +Y S+ S   YF   D+D  D TF S+ D + K  +    Y  +K  +E   L
Sbjct: 267 QQHHARLIYVSTISVGTYF---DIDTEDVTF-SEAD-VYKGQLLTSPYTRSKFYSELKVL 321
Query: 177 EFAEEHGLD 185
           E A  +GLD
Sbjct: 322 E-AVNNGLD 329

>pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 Length = 336

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 7   KVCVTGGTGFIGSWLIMRLLD-HGYFVTTTVR-----SDPEHKKDLSFLTNLPGASERLQ 60
           K+ VTGG GFIGS  I  +L+ H  +    +      S+P + KDL           R  
Sbjct: 5   KLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLE-------DDPRYT 57
Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGK-ETEEVMTQRAVNGTIGILKSCLKSG 119
               D+ D E     +    GV+H+AA   +D    + E+     V GT  +L+S  +  
Sbjct: 58  FVKGDVADYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRREN 117
Query: 120 TVKRFVYTSS 129
              RFV+ S+
Sbjct: 118 PEVRFVHVST 127

>pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 115/270 (42%), Gaps = 38/270 (14%)
Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           + VTGG GFIGS ++ +L +    V     S            N    +E  ++  ADL 
Sbjct: 4   IVVTGGAGFIGSHVVDKLSESNEIVVIDNLSS----------GNEEFVNEAARLVKADLA 53
Query: 68  DPESFDAAIAGCAGVIHVAAPIDID-GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
             +  D  + G   V H+AA  D+  G E  + + +  V  T  +L++  K+G V R V+
Sbjct: 54  ADDIKD-YLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVF 111
Query: 127 TSSGSTVYFSGKDVDMLDETFWSDEDY-IRKLDIWGKSYVLTKTLTERAALEFAEEHGLD 185
           TS+ STVY   K +        + EDY    + ++G S +  + L E         H  D
Sbjct: 112 TST-STVYGEAKVIP-------TPEDYPTHPISLYGASKLACEALIESYC------HTFD 157
Query: 186 LVTLIPSF--VVGPFICPKFAGSVRSTLAMVLGNREEYSIL----LNISMVHIDDVARAH 239
           +   I  F  V+G        G +   +  +  N EE  IL     N S ++I D   A 
Sbjct: 158 MQAWIYRFANVIGR---RSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAM 214
Query: 240 IFLLEYPDAKGRY-ICSSAKLTIQEMAEFL 268
           +F L   +    + I S  ++ ++ +AE +
Sbjct: 215 LFGLRGDERVNIFNIGSEDQIKVKRIAEIV 244

>pdb|3ENK|A Chain A, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From Burkholderia Pseudomallei Length = 341

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 5   KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA 64
           KG + VTGG G+IGS   + LL HGY V          ++ ++ +  + G +        
Sbjct: 5   KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFH--ET 62
Query: 65  DLNDPES----FDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           D++D  +    FDA     A  IH AA   +     + +   R    ++  L   ++   
Sbjct: 63  DVSDERALARIFDAHPITAA--IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA 120
Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETF 147
           VKR V++SS +TVY    +   +DETF
Sbjct: 121 VKRIVFSSS-ATVY-GVPERSPIDETF 145

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           ++ VTGG GFIGS L+ +L++ GY V             +  +    G S  L +   DL
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVV-----------VDIVQRDTGGSAELHV--RDL 48
Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMT-QRAVNGTIGILKSCLKSGTVKRFV 125
            D  S+ A I G   V H AA  ++    TE ++     V  T  +L+   ++G   R V
Sbjct: 49  KD-YSWGAGIKGDV-VFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGV--RTV 104
Query: 126 YTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLD 185
             +S STVY    D D++      +E+  + + ++G +    K   E     +A   G+ 
Sbjct: 105 VFASSSTVY---GDADVIPT---PEEEPYKPISVYGAA----KAAGEVMCATYARLFGVR 154
Query: 186 LVTLIPSFVVGP 197
            + +  + VVGP
Sbjct: 155 CLAVRYANVVGP 166

>pdb|4F6C|A Chain A, Crystal Structure Of Aureusimine Biosynthetic Cluster Reductase Domain Length = 427

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 80/189 (42%), Gaps = 19/189 (10%)
Query: 6   GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNL------PGASERL 59
           G   +TG TGF+G++LI  L  + + +   +R+D E        TNL            L
Sbjct: 70  GNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLXTNLNDYFSEETVEXXL 129
Query: 60  QIFNADLNDPESFDAAI--AGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLK 117
                 + D E  D  +       +IH  A  D  G + E    +  V GT+ +++  L 
Sbjct: 130 SNIEVIVGDFECXDDVVLPENXDTIIHAGARTDHFGDDDE--FEKVNVQGTVDVIR--LA 185
Query: 118 SGTVKRFVYTSSGST-VYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAAL 176
                R +Y S+ S   YF   D+D  D TF S+ D + K  +    Y  +K  +E   L
Sbjct: 186 QQHHARLIYVSTISVGTYF---DIDTEDVTF-SEAD-VYKGQLLTSPYTRSKFYSELKVL 240
Query: 177 EFAEEHGLD 185
           E A  +GLD
Sbjct: 241 E-AVNNGLD 248

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 24/192 (12%)
Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           ++ VTGG GFIGS L+ +L++ GY V      D        F+   P A   ++    DL
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVVV---DNLSSGRREFVN--PSAELHVR----DL 52
Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMT-QRAVNGTIGILKSCLKSGTVKRFV 125
            D  S+ A I G   V H AA  ++    TE ++     V  T  +L+   ++G   R V
Sbjct: 53  KD-YSWGAGIKGDV-VFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGV--RTV 108
Query: 126 YTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLD 185
             +S STVY    D D++      +E+  + + ++G +    K   E     +A   G+ 
Sbjct: 109 VFASSSTVY---GDADVIPT---PEEEPYKPISVYGAA----KAAGEVMCATYARLFGVR 158
Query: 186 LVTLIPSFVVGP 197
            + +  + VVGP
Sbjct: 159 CLAVRYANVVGP 170

>pdb|3DHN|A Chain A, Crystal Structure Of The Putative Epimerase Q89z24_bactn From Bacteroides Thetaiotaomicron. Northeast Structural Genomics Consortium Target Btr310 Length = 227

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 14/88 (15%)
Query: 3  EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRS------DPEH----KKDLSFLTNL 52
          E+  K+ + G +GF+GS L+   L+ G+ VT  VR       + EH    K D+S L  +
Sbjct: 2  EKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEV 61
Query: 53 ----PGASERLQIFNADLNDPESFDAAI 76
               GA   +  FN   N+P+ +D  I
Sbjct: 62 CEVCKGADAVISAFNPGWNNPDIYDETI 89

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	327
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	1e-162
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-155
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-144
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	1e-110
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	3e-66
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	1e-63
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	2e-28
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-26
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	6e-26
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	1e-25
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	2e-24
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	3e-24
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	3e-23
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	8e-23
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	2e-22
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	4e-22
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	9e-22
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	1e-21
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	3e-21
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	5e-21
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	7e-21
1xq6_A	253	Unknown protein; structural genomics, protein stru	8e-21
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	4e-20
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	2e-19
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	2e-19
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	2e-19
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	1e-18
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	1e-18
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	4e-18
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	4e-18
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	7e-18
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	7e-18
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	1e-17
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	1e-16
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	1e-16
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	2e-16
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	2e-16
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	6e-16
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	1e-15
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	2e-15
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	3e-15
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	4e-15
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	5e-15
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	6e-15
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	2e-14
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	5e-14
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	1e-13
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	2e-13
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	2e-13
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	3e-13
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	1e-12
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	1e-10
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	1e-10
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	1e-09
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	3e-09
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	3e-09
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	5e-09
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	5e-09
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	2e-08
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	2e-08
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	8e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-04
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	5e-07
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	9e-07
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	2e-06
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	2e-06
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	3e-06
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	1e-05
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	7e-05
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	1e-04
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	1e-04

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score =  453 bits (1168), Expect = e-162
 Identities = 185/323 (57%), Positives = 246/323 (76%), Gaps = 1/323 (0%)

Query: 5   KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA 64
           KG+VCVTGGTGF+GSW+I  LL++GY V TT+R+DPE K+D+SFLTNLPGASE+L  FNA
Sbjct: 1   KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNA 60

Query: 65  DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRF 124
           DL++P+SF AAI GC G+ H A+PID    E EE++T+R V+G +GILK+C+ S TVKRF
Sbjct: 61  DLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRF 120

Query: 125 VYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGL 184
           +YTSSGS V F+GKD D+LDE+ WSD D +R +  +G +Y ++KTL E+A LEF E++G+
Sbjct: 121 IYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGI 180

Query: 185 DLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLE 244
           D+VTLI  F+VG F+CPK   S+   L +VLG +E+  +     MVH+DDVARAHI+LLE
Sbjct: 181 DVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGV-TRFHMVHVDDVARAHIYLLE 239

Query: 245 YPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICF 304
                GRY CS   + I+EM++ LSAK+PEY I  VD L EI+G +L  L++KKL+D  F
Sbjct: 240 NSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGARLPDLNTKKLVDAGF 299

Query: 305 TYKYGIDEMFDGAIKCCKERGYL 327
            +KY I++MFD AI+CCKE+GYL
Sbjct: 300 DFKYTIEDMFDDAIQCCKEKGYL 322

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score =  436 bits (1123), Expect = e-155
 Identities = 144/327 (44%), Positives = 202/327 (61%), Gaps = 2/327 (0%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           M  Q   VCVTG +GFIGSWL+MRLL+ GY V  TVR DP + K +  L +LP A   L 
Sbjct: 1   MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVR-DPTNVKKVKHLLDLPKAETHLT 59

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           ++ ADL D  SFD AI GC GV HVA P+D + K+ E  + +  + G +GI+KSC  + T
Sbjct: 60  LWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKT 119

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           V+R V+TSS  TV      + + DE+ WSD ++ R   +    Y ++KTL E+AA ++A+
Sbjct: 120 VRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAK 179

Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI 240
           E+ +D +T+IP+ VVGPFI      S+ + L+ + GN   YSI+     VH+DD+  AHI
Sbjct: 180 ENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHI 239

Query: 241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLL 300
           +L E P A+GRYICSS    I ++A+ L  K+PEY IP      + E  K    SSKKL 
Sbjct: 240 YLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVD-ENLKSVCFSSKKLT 298

Query: 301 DICFTYKYGIDEMFDGAIKCCKERGYL 327
           D+ F +KY +++MF GA+  C+ +G L
Sbjct: 299 DLGFEFKYSLEDMFTGAVDTCRAKGLL 325

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score =  410 bits (1056), Expect = e-144
 Identities = 121/332 (36%), Positives = 196/332 (59%), Gaps = 13/332 (3%)

Query: 5   KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA 64
           K   CV GGTGF+ S L+  LL  GY V TTVR DP+++K +S L  L    + L+IF A
Sbjct: 9   KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVR-DPDNQKKVSHLLELQELGD-LKIFRA 66

Query: 65  DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRF 124
           DL D  SF+A IAGC  V HVA P+    ++ E  M + A+ G + ++K+C ++ +VKR 
Sbjct: 67  DLTDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRV 126

Query: 125 VYTSSGSTVYFSGKDVD--MLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH 182
           + TSS + V  +  D    ++DE  W+D +++         Y  +KTL E+AA +FAEE+
Sbjct: 127 ILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN 186

Query: 183 GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL-------LNISMVHIDDV 235
            +DL+T+IP+ + G  +      S+   ++++ GN    + +        ++S+ H++DV
Sbjct: 187 NIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDV 246

Query: 236 ARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALS 295
            RAHIF+ E   A GRYIC +A  ++ E+A+FLS ++P+Y +P      +        +S
Sbjct: 247 CRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVP--TDFGDFPPKSKLIIS 304

Query: 296 SKKLLDICFTYKYGIDEMFDGAIKCCKERGYL 327
           S+KL+   F++KYGI+E++D +++  K +G L
Sbjct: 305 SEKLVKEGFSFKYGIEEIYDESVEYFKAKGLL 336

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score =  324 bits (832), Expect = e-110
 Identities = 73/335 (21%), Positives = 130/335 (38%), Gaps = 19/335 (5%)

Query: 4   QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
           +   V VTG  GF+ S ++ +LL+HGY V  T RS      +L    +            
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS-ASKLANLQKRWDAKYPGRFETAVV 68

Query: 64  ADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKR 123
            D+    ++D  I G AGV H+A+ +    K  E  +   A+ GT+  L++   + +VKR
Sbjct: 69  EDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDE--VVTPAIGGTLNALRAAAATPSVKR 126

Query: 124 FVYTSSGSTVYFSGKDVD--MLDETFWSDEDYIRKLDIWGKS-------YVLTKTLTERA 174
           FV TSS  +      +V+   LDE  W+ E   +   +           Y  +KT  E A
Sbjct: 127 FVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELA 186

Query: 175 ALEFAEEHG--LDLVTLIPSFVVGPFICPKFAG--SVRSTLAMVLGNREEY-SILLNISM 229
           A +F +E+     L  ++P++ +G    P+     +    +++  G      +++     
Sbjct: 187 AWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYY 246

Query: 230 VHIDDVARAHIFLLEYPDAKG-RYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEG 288
           V   D+   H+  L  P  +  R   ++       +       +P    P        + 
Sbjct: 247 VSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDL 306

Query: 289 YKL-SALSSKKLLDICFTYKYGIDEMFDGAIKCCK 322
            K  +A S + L  +       I+E     +    
Sbjct: 307 SKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSET 341

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  210 bits (538), Expect = 3e-66
 Identities = 51/275 (18%), Positives = 91/275 (33%), Gaps = 24/275 (8%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           K  V G TG +G      +   G+ +    R        +  L  L       +   A++
Sbjct: 15  KYAVLGATGLLGHHAARAIRAAGHDLVLIHRP----SSQIQRLAYLE-----PECRVAEM 65

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
            D    + A+ G  GVI  A       +  +E     A+  T     +CL++  V R +Y
Sbjct: 66  LDHAGLERALRGLDGVIFSAGYYPSRPRRWQE-EVASALGQTNPFYAACLQAR-VPRILY 123

Query: 127 TSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDL 186
             S               E  + D     K       YVL K   +  A E A   GL +
Sbjct: 124 VGSAY-AMPRHPQGLPGHEGLFYDSLPSGKSS-----YVLCKWALDEQAREQARN-GLPV 176

Query: 187 VTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP 246
           V  IP  V+G         +    +  +      + +    +++   +  R  +  LE  
Sbjct: 177 VIGIPGMVLGE---LDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERG 233

Query: 247 DAKGRYICSSAKLTIQEMAEFLSA---KHPEYPIP 278
               RY+ +   L + ++   ++    +    P+ 
Sbjct: 234 RIGERYLLTGHNLEMADLTRRIAELLGQPAPQPMS 268

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  200 bits (510), Expect = 1e-63
 Identities = 54/254 (21%), Positives = 95/254 (37%), Gaps = 38/254 (14%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           ME+ K K+ + G +GF+GS L+   L+ G+ VT  VR  PE          +   +E L+
Sbjct: 1   MEKVK-KIVLIGASGFVGSALLNEALNRGFEVTAVVR-HPE---------KIKIENEHLK 49

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           +  AD++  +       G   VI    P   +       +    +   + I+    K+G 
Sbjct: 50  VKKADVSSLDEVCEVCKGADAVISAFNPGWNN-----PDIYDETIKVYLTIIDGVKKAG- 103

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           V RF+      +++ +      L ++    E+               K L E       +
Sbjct: 104 VNRFLMVGGAGSLFIA--PGLRLMDSGEVPENI----------LPGVKALGEFYLNFLMK 151

Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI 240
           E  +D V   P+  + P         VR+     LG  +    ++  S + ++D A A I
Sbjct: 152 EKEIDWVFFSPAADMRP--------GVRTGR-YRLGKDDMIVDIVGNSHISVEDYAAAMI 202

Query: 241 FLLEYPDAKGRYIC 254
             LE+P        
Sbjct: 203 DELEHPKHHQERFT 216

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score =  110 bits (278), Expect = 2e-28
 Identities = 61/327 (18%), Positives = 121/327 (37%), Gaps = 40/327 (12%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           + VTG +G IG+ L+  L +          SD            +   +  ++    D++
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIA-SD-----------IVQRDTGGIKFITLDVS 49

Query: 68  DPESFDAAIA--GCAGVIHVAAPIDIDGKETEEVMTQRAVN--GTIGILKSCLKSGTVKR 123
           + +  D A+       + H+A  +   G+  ++      VN  GT  IL++  +   V++
Sbjct: 50  NRDEIDRAVEKYSIDAIFHLAGILSAKGE--KDPALAYKVNMNGTYNILEAAKQHR-VEK 106

Query: 124 FVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG 183
            V  S+   V+      + +     +    +         + +TK   E     + E+ G
Sbjct: 107 VVIPSTIG-VFGPETPKNKVPSITITRPRTM---------FGVTKIAAELLGQYYYEKFG 156

Query: 184 LDLVTLIPSFVVGPFICPK-FAGSVRSTLAMVLGNREEYSILLNIS----MVHIDDVARA 238
           LD+ +L    ++     P          +      RE+Y   L  +    M+++ D  +A
Sbjct: 157 LDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKA 216

Query: 239 HIFLLEYPDAKGR----YICSSAKLTIQEMAEFLSAKHPEYPIP-NVDSLSEI-EGYKLS 292
            + L E    K      Y  ++   T  E+   +  + PE+ I    D   +I   +  S
Sbjct: 217 LVDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIEYKEDFRDKIAATWPES 276

Query: 293 ALSSKKLLDICFTYKYGIDEMFDGAIK 319
             SS+   +  F+ +Y +D   D  I 
Sbjct: 277 LDSSEASNEWGFSIEYDLDRTIDDMID 303

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score =  103 bits (258), Expect = 2e-26
 Identities = 31/245 (12%), Positives = 71/245 (28%), Gaps = 40/245 (16%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           K+ + G TG  GS ++    + G+ VT  VR +            +    + + I   D+
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIVR-NAGK---------ITQTHKDINILQKDI 51

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
            D     + ++    V+        +         ++ V     ++     +    R + 
Sbjct: 52  FDLTL--SDLSDQNVVVDAYGISPDEA--------EKHVTSLDHLISVLNGTV-SPRLLV 100

Query: 127 TSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDL 186
               +++        +L+     +  Y        K          +     + +     
Sbjct: 101 VGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAK----------QLEHLKSHQAEFSW 150

Query: 187 VTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP 246
             + PS +  P            T    +G           S + ++D A A +  +E P
Sbjct: 151 TYISPSAMFEPG---------ERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERP 201

Query: 247 DAKGR 251
           +    
Sbjct: 202 NHLNE 206

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score =  103 bits (258), Expect = 6e-26
 Identities = 36/191 (18%), Positives = 65/191 (34%), Gaps = 26/191 (13%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           ++ VTG  G +G  +  RL      +     S             L  A    +    DL
Sbjct: 5   RLLVTGAAGQLGRVMRERLAPMAEILRLADLS------------PLDPAGPNEECVQCDL 52

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
            D  + +A +AGC G++H+            E + Q  + G   + ++    G   R V+
Sbjct: 53  ADANAVNAMVAGCDGIVHLGGISVEK---PFEQILQGNIIGLYNLYEAARAHG-QPRIVF 108

Query: 127 TSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDL 186
            SS  T+ +         +T     D   + D     Y ++K   E  A  + ++ G + 
Sbjct: 109 ASSNHTIGY-------YPQTERLGPDVPARPD---GLYGVSKCFGENLARMYFDKFGQET 158

Query: 187 VTLIPSFVVGP 197
             +        
Sbjct: 159 ALVRIGSCTPE 169

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score =  102 bits (256), Expect = 1e-25
 Identities = 34/193 (17%), Positives = 67/193 (34%), Gaps = 30/193 (15%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           ++ VTG  G +GS +   L    + V  +   D               A    +I   DL
Sbjct: 4   RLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA------------AEAHEEIVACDL 51

Query: 67  NDPESFDAAIAGCAGVIHVAA-PIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFV 125
            D ++    +  C G+IH+    ++    +  +      + G   + ++    G   R V
Sbjct: 52  ADAQAVHDLVKDCDGIIHLGGVSVERPWNDILQA----NIIGAYNLYEAARNLG-KPRIV 106

Query: 126 YTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS-YVLTKTLTERAALEFAEEHGL 184
           + SS  T+ +  +           D +  R+ D    S Y L+K   E  A  +  +  +
Sbjct: 107 FASSNHTIGYYPRTT-------RIDTEVPRRPD----SLYGLSKCFGEDLASLYYHKFDI 155

Query: 185 DLVTLIPSFVVGP 197
           + + +        
Sbjct: 156 ETLNIRIGSCFPK 168

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 99.9 bits (250), Expect = 2e-24
 Identities = 72/328 (21%), Positives = 124/328 (37%), Gaps = 62/328 (18%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLS--FLTNLPGASERLQIFNA 64
            + VTGG GFIGS ++ +L +    +      D     +LS      +    E  ++  A
Sbjct: 3   LIVVTGGAGFIGSHVVDKLSE-SNEIVVI---D-----NLSSGNEEFVN---EAARLVKA 50

Query: 65  DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVN--GTIGILKSCLKSGTVK 122
           DL   +     + G   V H+AA  D+     E        N   T  +L++  K+G V 
Sbjct: 51  DLAADD-IKDYLKGAEEVWHIAANPDV-RIGAENPDEIYRNNVLATYRLLEAMRKAG-VS 107

Query: 123 RFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS-YVLTKTLTERAALEFAEE 181
           R V+TS+ STVY  G+      +   + EDY         S Y  +K   E     +   
Sbjct: 108 RIVFTST-STVY--GE-----AKVIPTPEDYPTHP----ISLYGASKLACEALIESYCHT 155

Query: 182 HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-------LGNREEYSIL---LNI-SMV 230
             +       + V+G           RST  ++         N EE  IL       S +
Sbjct: 156 FDMQAWIYRFANVIGR----------RSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYI 205

Query: 231 HIDDVARAHIFLLEYPDAKGRY-ICSSAKLTIQEMAEFLSAK-----HPEYPIPNVDSLS 284
           +I D   A +F L   +    + I S  ++ ++ +AE +  +        +   +     
Sbjct: 206 YISDCVDAMLFGLRGDERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKG 265

Query: 285 EIEGYKLSALSSKKLLDICFTYKYGIDE 312
           ++    +  LS +KL  + +  +Y  +E
Sbjct: 266 DV---PVMLLSIEKLKRLGWKPRYNSEE 290

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score =  100 bits (251), Expect = 3e-24
 Identities = 50/288 (17%), Positives = 91/288 (31%), Gaps = 43/288 (14%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLS--FLTNLPGASERLQIFNA 64
            V V GG GF+GS L+ RLL+ G      V  D     +L      N+P     ++    
Sbjct: 34  NVMVVGGAGFVGSNLVKRLLELGVNQVHVV--D-----NLLSAEKINVPD-HPAVRFSET 85

Query: 65  DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRA-VNGTIGILKSCLKSGTVKR 123
            + D     +       V H+A          + +         T+ + +       +K+
Sbjct: 86  SITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKK 145

Query: 124 FVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS-YVLTKTLTERAALEFAEEH 182
            VY+++G          D                     S Y ++K   E  ++ + ++H
Sbjct: 146 VVYSAAGC-SIAEKTFDDAKATEETDIVSLHNND-----SPYSMSKIFGEFYSVYYHKQH 199

Query: 183 GLDLVTLIPSFVVGPFICP---KFAGSVRSTLAMVLGNREEYSILLNI------------ 227
            L  V      V GP       ++ G+  +    V         +               
Sbjct: 200 QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPT-----FIYKALKGMPLPLENGG 254

Query: 228 ----SMVHIDDVARAHIFLLEYPDAKGRY-ICSSAKLTIQEMAEFLSA 270
                 + ++DVA   I         G Y I S  + +I ++A  ++ 
Sbjct: 255 VATRDFIFVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINE 302

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 96.5 bits (241), Expect = 3e-23
 Identities = 56/326 (17%), Positives = 115/326 (35%), Gaps = 65/326 (19%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           K+ VTGGTGF+G +++  + + G                   LT   G ++ +  +   +
Sbjct: 4   KIAVTGGTGFLGQYVVESIKNDGNTPII--------------LTRSIG-NKAINDYEYRV 48

Query: 67  NDPESFDA--AIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRF 124
           +D    D    +     V+H+AA       +  E         T  +  +C ++  +   
Sbjct: 49  SDYTLEDLINQLNDVDAVVHLAATRGSQ-GKISEFHDN--EILTQNLYDACYENN-ISNI 104

Query: 125 VYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS-YVLTKTLTERAALEFAEEHG 183
           VY S+ S  Y             W++++            Y ++K   E     ++ + G
Sbjct: 105 VYASTIS-AY--S----DETSLPWNEKELPLPD-----LMYGVSKLACEHIGNIYSRKKG 152

Query: 184 LDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLG-------NREEYSILLNISM----VHI 232
           L +  L  + + G                 ++        + E+ ++  N       ++ 
Sbjct: 153 LCIKNLRFAHLYGF----------NEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYA 202

Query: 233 DDVARAHIFLLEYPDAKGRY-ICSSAKLTIQEMAEFLSA-----KHPEYPIPNVDSLSEI 286
            D A++ I+ L+     G + I S   LT  E+A  ++       +     P  ++   I
Sbjct: 203 KDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNP--NANEGI 260

Query: 287 EGYKLSALSSKKLLDICFTYKYGIDE 312
               + +  +K+LLD  F+  Y    
Sbjct: 261 HSSYMDSSKAKELLD--FSTDYNFAT 284

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 95.7 bits (239), Expect = 8e-23
 Identities = 67/277 (24%), Positives = 110/277 (39%), Gaps = 42/277 (15%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLS--FLTNLPGASERLQIFNA 64
           +V VTGG GFIGS ++  LL  G  V      D     +L+     N+P   + +  F  
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGLEVAVL---D-----NLATGKRENVP---KGVPFFRV 50

Query: 65  DLNDPESFDAAIAGCA--GVIHVAAPIDIDGKETEE-VMTQRA-VNGTIGILKSCLKSGT 120
           DL D E  + A        V H AA   +     E+ V+     + G + +L++C + G 
Sbjct: 51  DLRDKEGVERAFREFRPTHVSHQAAQASV-KVSVEDPVLDFEVNLLGGLNLLEACRQYG- 108

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS-YVLTKTLTERAALEFA 179
           V++ V+ S+G  +Y    + +  +ET        R       S Y  +K   E     + 
Sbjct: 109 VEKLVFASTGGAIYGEVPEGERAEET-----WPPRPK-----SPYAASKAAFEHYLSVYG 158

Query: 180 EEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISM---------V 230
           + +GL  V+L    V GP   P     V +  A  +      ++    +          V
Sbjct: 159 QSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYV 218

Query: 231 HIDDVARAHIFLLEYPDAKGRY-ICSSAKLTIQEMAE 266
           ++ DVA AH   L   +  G Y + +    T +E+  
Sbjct: 219 YVGDVAEAHALALFSLE--GIYNVGTGEGHTTREVLM 253

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 92.4 bits (230), Expect = 2e-22
 Identities = 46/269 (17%), Positives = 88/269 (32%), Gaps = 57/269 (21%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           K+ + G TG +G  L+  L    Y +    R   E                 ++  + D+
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAGAR-KVEQVPQY----------NNVKAVHFDV 50

Query: 67  N-DPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFV 125
           +  PE     + G   +I+V+      GK   +V       G + ++++  K+  VKRF+
Sbjct: 51  DWTPEEMAKQLHGMDAIINVSG---SGGKSLLKVDLY----GAVKLMQAAEKAE-VKRFI 102

Query: 126 YTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLD 185
             S+     FS +    +   F + +DY              K   +       +E  LD
Sbjct: 103 LLST----IFSLQPEKWIGAGFDALKDYYI-----------AKHFADLYLT---KETNLD 144

Query: 186 LVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEY 245
              + P  +       +  G +       + +    S         I DVA     L+  
Sbjct: 145 YTIIQPGALTE----EEATGLID------INDEVSASN-------TIGDVADTIKELVMT 187

Query: 246 PDAKGRY--ICSSAKLTIQEMAEFLSAKH 272
             + G+   + +      + +   L   H
Sbjct: 188 DHSIGKVISMHNGKTAIKEALESLLEHHH 216

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 94.3 bits (235), Expect = 4e-22
 Identities = 60/297 (20%), Positives = 108/297 (36%), Gaps = 57/297 (19%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVT------TTVRSDPEHKKDLSFLTNLPG 54
           +  Q     +TG  GFIGS L+  LL     V       T  + + +  + L        
Sbjct: 23  LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWS- 81

Query: 55  ASERLQIFNADLNDPESFDAAIAGCAGVIHVAAPIDI-----DGKETEEVMTQRAVNGTI 109
                +    D+ + +  + A AG   V+H AA   +     D   +        ++G +
Sbjct: 82  ---NFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNAT----NIDGFL 134

Query: 110 GILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS-YVLTK 168
            +L +   +  V+ F Y +S S  Y  G             ED I K      S Y +TK
Sbjct: 135 NMLIAARDAK-VQSFTYAASSS-TY--G-----DHPGLPKVEDTIGKP----LSPYAVTK 181

Query: 169 TLTERAALEFAEEHGLDLVTLIPSFVVGP---------FICPKFAGSVRSTLAMVLGNRE 219
            + E  A  F+  +G   + L    V G           + PK+      T +M+ G  +
Sbjct: 182 YVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKW------TSSMIQG--D 233

Query: 220 EYSILLNISM----VHIDDVARAHIFLLEYP-DAKGR-Y-ICSSAKLTIQEMAEFLS 269
           +  I  +        +I++  +A++       DA+ + Y I    + ++ ++   L 
Sbjct: 234 DVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALR 290

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 92.6 bits (231), Expect = 9e-22
 Identities = 59/284 (20%), Positives = 104/284 (36%), Gaps = 58/284 (20%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLS--FLTNLPGASERLQIFNA 64
           ++ VTGG GFIGS L+ +L++ GY V      D     +LS      +       ++   
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVVV---D-----NLSSGRREFVN---PSAELHVR 50

Query: 65  DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVN--GTIGILKSCLKSGTVK 122
           DL D      A      V H AA  ++    T E +     N   T  +L+   ++G V+
Sbjct: 51  DLKDYSWG--AGIKGDVVFHFAANPEV-RLSTTEPIVHFNENVVATFNVLEWARQTG-VR 106

Query: 123 RFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS-YVLTKTLTERAALEFAEE 181
             V+ SS STVY  G       +   + E+   K      S Y   K   E     +A  
Sbjct: 107 TVVFASS-STVY--GD-----ADVIPTPEEEPYKP----ISVYGAAKAAGEVMCATYARL 154

Query: 182 HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-------LGNREEYSIL---LNI-SMV 230
            G+  + +  + VVGP          R    ++         N     +L       S +
Sbjct: 155 FGVRCLAVRYANVVGP----------RLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYL 204

Query: 231 HIDDVARAHIFLLEYPDAKGRY-----ICSSAKLTIQEMAEFLS 269
           ++ D   A +   +  +          + +   + + ++A+ ++
Sbjct: 205 YVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVA 248

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 92.7 bits (231), Expect = 1e-21
 Identities = 56/277 (20%), Positives = 93/277 (33%), Gaps = 54/277 (19%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLS--FLTNLPGASERLQIFNA 64
           KV +TG  G IGS +   LL+ G  V      D     + +     +L      L     
Sbjct: 23  KVFITGICGQIGSHIAELLLERGDKVVGI---D-----NFATGRREHLKD-HPNLTFVEG 73

Query: 65  DLNDPESFDAAIAGCA--GVIHVAAPIDIDGKETEEVMTQRAVN--GTIGILKSCLKSGT 120
            + D    +  I       V+H AA         ++       N  G   ++++  K+  
Sbjct: 74  SIADHALVNQLIGDLQPDAVVHTAASYKDP----DDWYNDTLTNCVGGSNVVQAAKKNN- 128

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           V RFVY  +            +         D+    +    SY ++K+  E     + E
Sbjct: 129 VGRFVYFQTALCYGVKPIQQPV-------RLDHP--RNPANSSYAISKSANED----YLE 175

Query: 181 EHGLDLVTLIPSFVVGPF----ICPKFAGSVRSTLAMVLGNREEYSILLNISM----VHI 232
             GLD VT   + VVGP       P F   +       +                  V +
Sbjct: 176 YSGLDFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFVTK-----------ARRDFVFV 224

Query: 233 DDVARAHIFLLEYPDAKGRY-ICSSAKLTIQEMAEFL 268
            D+ARA +  ++     G Y   S   + I+E+ + +
Sbjct: 225 KDLARATVRAVDGV-GHGAYHFSSGTDVAIKELYDAV 260

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 91.7 bits (227), Expect = 3e-21
 Identities = 50/309 (16%), Positives = 87/309 (28%), Gaps = 44/309 (14%)

Query: 10  VTGGTGFIGSWLIMRLLDHGYF-----VTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA 64
           + G TG IG+ L   L           V    R                     +     
Sbjct: 6   IVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRP----------AWHEDNPINYVQC 55

Query: 65  DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRF 124
           D++DP+   A ++    V HV        + TE+   +        +L + + +    + 
Sbjct: 56  DISDPDDSQAKLSPLTDVTHVFYVTWA-NRSTEQENCEANSKMFRNVLDAVIPNCPNLKH 114

Query: 125 VYTSSGSTVY---FSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE 181
           +   +G   Y   F         +  +  ED  R    +   Y     L +    E  ++
Sbjct: 115 ISLQTGRKHYMGPFESYGKIESHDPPY-TEDLPR--LKYMNFY---YDLEDIMLEEVEKK 168

Query: 182 HGLDLVTLIPSFVVGP----------FICPKFAGSVRSTLAMVL-GNREEYSILLNISMV 230
            GL      P  + G            +C   A        +   G +  +         
Sbjct: 169 EGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGY--SDCS 226

Query: 231 HIDDVARAHIFLLEYPDAKGR-YICS-----SAKLTIQEMAEFLSAKHPEYPIPNVDSLS 284
             D +A  HI+    P AK   +  S       K   + +AE    +  EY       L 
Sbjct: 227 DADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQ 286

Query: 285 EIEGYKLSA 293
           ++   K   
Sbjct: 287 DLMKGKEPV 295

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 88.5 bits (220), Expect = 5e-21
 Identities = 39/245 (15%), Positives = 69/245 (28%), Gaps = 52/245 (21%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           K+ + G TG  G   + + +  GY VT  VR D                     +   D+
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVR-DSSRLPSE--------GPRPAHVVVGDV 55

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
                 D  +AG   VI +    +     T  VM++    G   I+ +    G V + V 
Sbjct: 56  LQAADVDKTVAGQDAVIVLLGTRNDLSPTT--VMSE----GARNIVAAMKAHG-VDKVVA 108

Query: 127 TSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDL 186
            +S   ++   K    L                  ++             +   E GL  
Sbjct: 109 CTSAFLLWDPTKVPPRL------------------QAVTDDH----IRMHKVLRESGLKY 146

Query: 187 VTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP 246
           V ++P                 +    V  +    S      ++   D+    +  L   
Sbjct: 147 VAVMPPH---------IGDQPLTGAYTVTLDGRGPS-----RVISKHDLGHFMLRCLTTD 192

Query: 247 DAKGR 251
           +  G 
Sbjct: 193 EYDGH 197

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 88.5 bits (219), Expect = 7e-21
 Identities = 35/247 (14%), Positives = 65/247 (26%), Gaps = 38/247 (15%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           K+ V G TG  GS ++      G+ V   VR DP+   D               +     
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVR-DPQKAADR----------LGATVATLVK 50

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
                 +A +     V+   +     G+          ++    ++     S        
Sbjct: 51  EPLVLTEADLDSVDAVVDALSVPWGSGRGYL------HLDFATHLVSLLRNSD-TLAVFI 103

Query: 127 TSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDL 186
             S S          +LD                 + +                   ++ 
Sbjct: 104 LGSASLAMPGADHPMILDFP----------ESAASQPWYDGALYQYYEYQFLQMNANVNW 153

Query: 187 VTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP 246
           + + PS           A S  +    +L   +        S +   ++A A +  LE+P
Sbjct: 154 IGISPSEAFP----SGPATSYVAGKDTLLVGEDGQ------SHITTGNMALAILDQLEHP 203

Query: 247 DAKGRYI 253
            A    I
Sbjct: 204 TAIRDRI 210

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 88.8 bits (220), Expect = 8e-21
 Identities = 41/286 (14%), Positives = 78/286 (27%), Gaps = 68/286 (23%)

Query: 4   QKGKVCVTGGTGFIGSWLIMRLLD--HGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQI 61
               V VTG +G  G  +  +L +    +     VR   + K+ +              +
Sbjct: 3   NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR-SAQGKEKI---------GGEADV 52

Query: 62  FNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVN--------------G 107
           F  D+ D +S + A  G   ++ + + +       +     R                 G
Sbjct: 53  FIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIG 112

Query: 108 TIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLT 167
               + +   +G VK  V   S                            D         
Sbjct: 113 QKNQIDAAKVAG-VKHIVVVGSMGG----------------------TNPDHPLNKLGNG 149

Query: 168 KTLTERAALEFAEEH----GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI 223
             L  +     AE++    G     +                       +++G  +E   
Sbjct: 150 NILVWKRK---AEQYLADSGTPYTIIRAGG---------LLDKEGGVRELLVGKDDELLQ 197

Query: 224 LLNISMVHIDDVARAHIFLLEYPDAKGR-Y-ICSSAKLTIQEMAEF 267
             +   V   DVA   I  L + +AK + + + S  + T     +F
Sbjct: 198 -TDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDF 242

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 88.9 bits (221), Expect = 4e-20
 Identities = 60/293 (20%), Positives = 96/293 (32%), Gaps = 42/293 (14%)

Query: 4   QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR-----SDPEHKKDLSFLTNLPGASER 58
           +   + VTGG GFIGS ++  L D G    T +       D           NL   +  
Sbjct: 45  EGRMIIVTGGAGFIGSNIVKALNDKGI---TDILVVDNLKDGTKFV------NLVDLNIA 95

Query: 59  LQIFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEV---MTQRAVNGTIGILKSC 115
             +   D                + H  A        TE     M       +  +L  C
Sbjct: 96  DYMDKEDFLIQIMAGEEFGDVEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYC 151

Query: 116 LKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAA 175
           L+      F+Y SS +  Y            F    +Y + L++    +  +K L +   
Sbjct: 152 LERE--IPFLYASSAA-TYGGRTSD------FIESREYEKPLNV----FGYSKFLFDEYV 198

Query: 176 LEFAEEHGLDLVTLIPSFVVGPFICPK-FAGSVRSTLAMVLGNREEYSILL---NISM-- 229
            +   E    +V      V GP    K    SV   L   L N E   +     N     
Sbjct: 199 RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDF 258

Query: 230 VHIDDVARAHIFLLEYPDAKGRY-ICSSAKLTIQEMAEFLSAKHPEYPIPNVD 281
           V++ DVA  +++ LE     G + + +    + Q +A+   A H +  I  + 
Sbjct: 259 VYVGDVADVNLWFLEN-GVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIP 310

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 85.9 bits (213), Expect = 2e-19
 Identities = 51/309 (16%), Positives = 95/309 (30%), Gaps = 68/309 (22%)

Query: 13  GTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESF 72
           G G +G  L  RL   G+ VT   RS  +                 +Q   AD+  P++ 
Sbjct: 10  GCGDLGLELARRLTAQGHEVTGLRRS-AQ------------PMPAGVQTLIADVTRPDTL 56

Query: 73  DAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGST 132
            + +     ++          + ++E      V G    L + L+   ++   + SS   
Sbjct: 57  ASIVHLRPEILVYCVA---ASEYSDEHYRLSYVEGLRNTLSA-LEGAPLQHVFFVSSTG- 111

Query: 133 VYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERA-ALEFAEE--HGLDLVTL 189
           VY    +        W DED                        +  AE          L
Sbjct: 112 VYGQEVEE-------WLDEDTP------------PIAKDFSGKRMLEAEALLAAYSSTIL 152

Query: 190 IPSFVVGP--FICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD 247
             S + GP      + A +           R  ++     + +H DD A    +L++   
Sbjct: 153 RFSGIYGPGRLRMIRQAQT-----PEQWPARNAWT-----NRIHRDDGAAFIAYLIQQRS 202

Query: 248 AKGRY----ICSSAKLTIQE----MAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL 299
                    +  +  L + +    +A+     +P        +   ++G K   LS+ +L
Sbjct: 203 HAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPA------GATPPVQGNKK--LSNARL 254

Query: 300 LDICFTYKY 308
           L   +   Y
Sbjct: 255 LASGYQLIY 263

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 86.5 bits (214), Expect = 2e-19
 Identities = 51/276 (18%), Positives = 86/276 (31%), Gaps = 50/276 (18%)

Query: 2   EEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQI 61
              K K+ + GGTG+IG+ ++   L  G+      R +      L         S    I
Sbjct: 8   NGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEF-----QSLGAII 62

Query: 62  FNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTV 121
              +L++ E     +     VI   A                 +     IL++   +G +
Sbjct: 63  VKGELDEHEKLVELMKKVDVVISALAF--------------PQILDQFKILEAIKVAGNI 108

Query: 122 KRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE 181
           KRF+ +  G                   +ED I  L    ++ +  K +  RA     EE
Sbjct: 109 KRFLPSDFG------------------VEEDRINALP-PFEALIERKRMIRRA----IEE 145

Query: 182 HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIF 241
             +    +  +     FI              V G  E        +M +  D+    I 
Sbjct: 146 ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAK-----FAMNYEQDIGLYTIK 200

Query: 242 LLEYPDAKGR---YICSSAKLTIQEMAEFLSAKHPE 274
           +   P A  R   Y  S+  +T  E+      K  +
Sbjct: 201 VATDPRALNRVVIYRPSTNIITQLELISRWEKKIGK 236

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 85.9 bits (213), Expect = 2e-19
 Identities = 49/279 (17%), Positives = 92/279 (32%), Gaps = 58/279 (20%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYF-VTTTVRSDPEHK--KDLSFLTNLPGASE 57
           M ++K  V V GGTG  G  +   LL+ G F V    R +P  K  K+L     L GA  
Sbjct: 2   MVDKK-LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR-NPRKKAAKELR----LQGA-- 53

Query: 58  RLQIFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLK 117
             ++   D +D    + A+ G      V    +   +E E    +   +          +
Sbjct: 54  --EVVQGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLAD-------LARR 104

Query: 118 SGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALE 177
            G +   VY+   +    +                          ++   K   E    E
Sbjct: 105 LG-LHYVVYSGLENIKKLTA--------------------GRLAAAHFDGKGEVE----E 139

Query: 178 FAEEHGLDLVTLIPSF----VVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHID 233
           +  + G+ + ++        ++  F+  K        L++  G+         +  + + 
Sbjct: 140 YFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVP-------MDGMSVS 192

Query: 234 DVAR-AHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSA 270
           D+       L       G+ I  S+ + T +E A  L+ 
Sbjct: 193 DLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTK 231

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 84.1 bits (209), Expect = 1e-18
 Identities = 51/287 (17%), Positives = 85/287 (29%), Gaps = 67/287 (23%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVT------TTVRSDPEHKKDLSFLTNLPGASERLQ 60
           ++ +TGG GFIG  L   L+  G  VT            PE                 L+
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL-------EKPVLE 61

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           +   DL+D             V H+A+   +     + +     V+    +L  C   G 
Sbjct: 62  LEERDLSDVR----------LVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVG- 110

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS-YVLTKTLTERAALEFA 179
           V + V  S+   VY     +          ED      +  +S Y  +K   E  A    
Sbjct: 111 VPKVVVGSTCE-VYGQADTLPT-------PEDSP----LSPRSPYAASKVGLEMVAGAHQ 158

Query: 180 EEHGLDLVTLI-----------PSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNIS 228
                  V ++           P  +V     P+          ++     E  +  +  
Sbjct: 159 RASVAPEVGIVRFFNVYGPGERPDALV-----PRL------CANLLTR--NELPVEGDGE 205

Query: 229 M----VHIDDVARAHIFLLEYPDAKGRY-ICSSAKLTIQEMAEFLSA 270
                 +I DV    + L   P         S   L++ ++   L A
Sbjct: 206 QRRDFTYITDVVDKLVALANRPLP-SVVNFGSGQSLSVNDVIRILQA 251

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 83.8 bits (208), Expect = 1e-18
 Identities = 61/299 (20%), Positives = 99/299 (33%), Gaps = 48/299 (16%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVR-----SDPEHKKDLSFLTNLPGASERLQIF 62
           + VTGG GFIGS ++  L D G    T +       D           NL   +    + 
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGI---TDILVVDNLKDGTKFV------NLVDLNIADYMD 52

Query: 63  NADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEV---MTQRAVNGTIGILKSCLKSG 119
             D                + H  A        TE     M       +  +L  CL+  
Sbjct: 53  KEDFLIQIMAGEEFGDVEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLERE 108

Query: 120 TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFA 179
               F+Y SS +  Y            F    +Y + L++    Y  +K L +    +  
Sbjct: 109 I--PFLYASSAA-TYGGRTSD------FIESREYEKPLNV----YGYSKFLFDEYVRQIL 155

Query: 180 EEHGLDLVTLIPSFVVGPFICPK-FAGSVRSTLAMVLGNREEYSILLNISM--------V 230
            E    +V      V GP    K    SV   L   L N E   +              V
Sbjct: 156 PEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKL---FEGSENFKRDFV 212

Query: 231 HIDDVARAHIFLLEYPDAKGRY-ICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEG 288
           ++ DVA  +++ LE   + G + + +    + Q +A+   A H +  I  +    +++G
Sbjct: 213 YVGDVADVNLWFLENGVS-GIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKG 270

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 83.1 bits (206), Expect = 4e-18
 Identities = 64/296 (21%), Positives = 106/296 (35%), Gaps = 57/296 (19%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVT------TTVRSDPEHKKDLSFLTNLPG 54
           +        +TG  GFIGS L+ +LL     V       T  + + +  K L        
Sbjct: 21  LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWS- 79

Query: 55  ASERLQIFNADLNDPESFDAAIAGCAGVIHVAAPIDI-----DGKETEEVMTQRAVNGTI 109
              R      D+ D  + +  + G   V+H AA   +     D   T        + G +
Sbjct: 80  ---RFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNAT----NITGFL 132

Query: 110 GILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS-YVLTK 168
            IL +   +  V+ F Y +S S  Y  G             E+ I        S Y +TK
Sbjct: 133 NILHAAKNAQ-VQSFTYAASSS-TY--G-----DHPALPKVEENIGNP----LSPYAVTK 179

Query: 169 TLTERAALEFAEEHGLDLVTLIPSFVVGPF---------ICPKFAGSVRSTLAMVLGNRE 219
            + E  A  +A  +G   + L    V G           + PK+      T AM+ G  +
Sbjct: 180 YVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKW------TAAMLKG--D 231

Query: 220 EYSILLNISM----VHIDDVARAHIF-LLEYPDAKGR-Y-ICSSAKLTIQEMAEFL 268
           +  I  +        +ID+V + +I   L    AK   Y +    + T+ E++ ++
Sbjct: 232 DVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYI 287

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 82.3 bits (204), Expect = 4e-18
 Identities = 48/327 (14%), Positives = 113/327 (34%), Gaps = 47/327 (14%)

Query: 7   KVCVTGGTGFIGSWLIMRLLD-HGYFVTTT---VRSDPEHKKDLSFLTNLPGASERLQIF 62
           K+ + G  G IG+ L  +L   +G          + + +      F              
Sbjct: 4   KILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPF-------------E 50

Query: 63  NADLNDPESFDAAIA--GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
             +  D    +  +       +  +AA +    ++         +N    +L        
Sbjct: 51  VVNALDFNQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK- 109

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRK-LDIWGKSYVLTKTLTERAALEFA 179
           +K+  + SS + V+  G           + +  I +   +    Y ++K   ER    + 
Sbjct: 110 IKKIFWPSSIA-VF--GPTTPK----ENTPQYTIMEPSTV----YGISKQAGERWCEYYH 158

Query: 180 EEHGLDLVTLIPSFVVGPFICPKFAGS---VRSTLAMVLGNREEYSILLN----ISMVHI 232
             +G+D+ ++    ++     P    +   V      +    ++Y   L+    + M+++
Sbjct: 159 NIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIAD--KKYECFLSSETKMPMMYM 216

Query: 233 DDVARAHIFLLEYPDAKGR----YICSSAKLTIQEMAEFLSAKHPEYPIP-NVDSLSEIE 287
           DD   A I +++ P  K +    Y  ++   T  E+A  +    PE+ I    D   +I 
Sbjct: 217 DDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTITYEPDFRQKIA 276

Query: 288 GYKLSALSSKKLL-DICFTYKYGIDEM 313
               +++   +   D  + + + ++ M
Sbjct: 277 DSWPASIDDSQAREDWDWKHTFDLESM 303

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 80.5 bits (199), Expect = 7e-18
 Identities = 45/246 (18%), Positives = 77/246 (31%), Gaps = 53/246 (21%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           +V V G  G +  +L+  L + G+     VR + E   +L              I  A+L
Sbjct: 23  RVLVVGANGKVARYLLSELKNKGHEPVAMVR-NEEQGPELR-------ERGASDIVVANL 74

Query: 67  NDPESFDAAIAGCAGVIHVA-APIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFV 125
              E F  A A    V+  A +       +T  +       G I  ++   K G +KRF+
Sbjct: 75  --EEDFSHAFASIDAVVFAAGSGPHTGADKTILIDLW----GAIKTIQEAEKRG-IKRFI 127

Query: 126 YTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLD 185
             SS         D D                    + Y++ K L +       +   LD
Sbjct: 128 MVSS-----VGTVDPDQGPMNM--------------RHYLVAKRLADDE----LKRSSLD 164

Query: 186 LVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEY 245
              + P            +    +    V  +  E +       +   DVA+    L++ 
Sbjct: 165 YTIVRPGP---------LSNEESTGKVTVSPHFSEIT-----RSITRHDVAKVIAELVDQ 210

Query: 246 PDAKGR 251
               G+
Sbjct: 211 QHTIGK 216

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 81.5 bits (201), Expect = 7e-18
 Identities = 52/278 (18%), Positives = 87/278 (31%), Gaps = 57/278 (20%)

Query: 5   KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR-----SDPEHKKDLSFLTNLPGASERL 59
           + K+ + G TG IG  ++   +  G      VR     ++PE K++L       G     
Sbjct: 2   ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGV---- 57

Query: 60  QIFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG 119
            +   D+ND E+   AI     VI  A  + I+ +              + I+K+  ++G
Sbjct: 58  ILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQ--------------VKIIKAIKEAG 103

Query: 120 TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFA 179
            VK+F  +  G        DVD  D      + +  K  I                    
Sbjct: 104 NVKKFFPSEFGL-------DVDRHDAVEPVRQVFEEKASIR----------------RVI 140

Query: 180 EEHGLDLVTLIPSF---VVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVA 236
           E  G+    L            +    A        ++LG+          + V   DV 
Sbjct: 141 EAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVK-----GAYVTEADVG 195

Query: 237 RAHIFLLEYPDAKGRYIC---SSAKLTIQEMAEFLSAK 271
              I     P+   + +        LT  E+      K
Sbjct: 196 TFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKK 233

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 81.3 bits (201), Expect = 1e-17
 Identities = 55/337 (16%), Positives = 102/337 (30%), Gaps = 42/337 (12%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK---KDLSFLTNLPGASERLQIFN 63
            + + G  G +G  L  RL+  G          P  K    D+       G S  +    
Sbjct: 16  HIAIIGAAGMVGRKLTQRLVKDGSL-----GGKPVEKFTLIDVFQPEAPAGFSGAVDARA 70

Query: 64  ADLNDPESFDAAI-AGCAGVIHVAAPIDIDGKETEEVMTQRAVN--GTIGILKSC----L 116
           ADL+ P   +  + A    + H+AA   + G+   +      +N  GT  +  +      
Sbjct: 71  ADLSAPGEAEKLVEARPDVIFHLAAI--VSGEAELDFDKGYRINLDGTRYLFDAIRIANG 128

Query: 117 KSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAAL 176
           K G   R V+TSS +   F       + + F +             SY   K + E    
Sbjct: 129 KDGYKPRVVFTSSIAV--FGAPLPYPIPDEFHTTPLT---------SYGTQKAICELLLS 177

Query: 177 EFAEEHGLDLVTLIPSFVVGPFICP-KFAGSVRSTLAMVLGNREEYSILLNIS----MVH 231
           +++     D + +    +      P   A    S +       +E  + +  S       
Sbjct: 178 DYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHAS 237

Query: 232 IDDVARAHIFLLEYPDAKGR----YICSSAKLTIQEMAEFLSAKHPEYPIPNV-----DS 282
                   I        K              T+ E  E L     E  +  +     + 
Sbjct: 238 PRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEKAVALIRREPNEM 297

Query: 283 LSEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAIK 319
           +  +         +K+  ++ FT +   +E+    I+
Sbjct: 298 IMRMCEGWAPGFEAKRARELGFTAESSFEEIIQVHIE 334

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 78.8 bits (194), Expect = 1e-16
 Identities = 50/316 (15%), Positives = 99/316 (31%), Gaps = 69/316 (21%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNAD- 65
            + +TG  GF+G  L   L                                   IF    
Sbjct: 2   NIVITGAKGFVGKNLKADLTSTTDHH----------------------------IFEVHR 33

Query: 66  LNDPESFDAAIAGCAGVIHVAAPIDI-DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRF 124
               E  ++A+     ++H+A        KE         V+    +L    ++   K  
Sbjct: 34  QTKEEELESALLKADFIVHLAGVNRPEHDKEFSLG----NVSYLDHVLDILTRNT-KKPA 88

Query: 125 VYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGL 184
           +  SS S                   +D           Y  +K   E+   E+AEE+G 
Sbjct: 89  ILLSS-SIQA---------------TQDNP---------YGESKLQGEQLLREYAEEYGN 123

Query: 185 DLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNRE--EYSILLNISMVHIDDVARAHIFL 242
            +       + G +  P +   + +    +  N E       + +++ ++DD+       
Sbjct: 124 TVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRA 183

Query: 243 LEYPDAKGRYIC---SSAKLTIQEMAEFLSAKH---PEYPIPNVDSLSEIEGYKLSALSS 296
           +E        +    +  K+T+ E+ + L        +  +P +D+L E + Y  + LS 
Sbjct: 184 IEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLFEKDLYS-TYLSY 242

Query: 297 KKLLDICFTYKYGIDE 312
               D  +     +D+
Sbjct: 243 LPSTDFSYPLLMNVDD 258

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 78.5 bits (194), Expect = 1e-16
 Identities = 51/283 (18%), Positives = 103/283 (36%), Gaps = 40/283 (14%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
              +  K+ +TG  GFI S +  RL   G++V  +         D     ++       +
Sbjct: 25  WPSENLKISITGAGGFIASHIARRLKHEGHYVIAS---------DWKKNEHMTEDMFCDE 75

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPID-IDGKETEEVMTQRA-VNGTIGILKSCLKS 118
               DL   E+      G   V ++AA +  +   ++   +        +  ++++   +
Sbjct: 76  FHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN 135

Query: 119 GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK----SYVLTKTLTERA 174
           G +KRF Y SS + +Y   K ++            +++ D W      ++ L K  TE  
Sbjct: 136 G-IKRFFYASS-ACIYPEFKQLET-------TNVSLKESDAWPAEPQDAFGLEKLATEEL 186

Query: 175 ALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAM---VLGNREEYSILLNI---- 227
              + ++ G++        + GPF   K  G  ++  A       + +       +    
Sbjct: 187 CKHYNKDFGIECRIGRFHNIYGPFGTWK-GGREKAPAAFCRKAQTSTDR----FEMWGDG 241

Query: 228 ----SMVHIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAE 266
               S   ID+     + L +    +   I S   +++ EMAE
Sbjct: 242 LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAE 284

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 78.8 bits (194), Expect = 2e-16
 Identities = 51/323 (15%), Positives = 95/323 (29%), Gaps = 53/323 (16%)

Query: 8   VCVTGGTGFIGSWLIMRLLDH---GYFVTTTVRSDPE-----------HKKDLSFLTNL- 52
           V +TG TGF+G +L++ LL        +   VR++ +              D   L +  
Sbjct: 76  VLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFK 135

Query: 53  PGASERLQIFNADLNDP------ESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVN 106
             A++RL++   D ++P        +         ++  AA ++               N
Sbjct: 136 ELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHE-----LFGPN 190

Query: 107 --GTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSY 164
             GT  +++  L +  +K F Y S+              D               W   Y
Sbjct: 191 VAGTAELIRIAL-TTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGY 249

Query: 165 VLTKTLTERAALEFAEEHGLDLVTLIPSFVVGP----FICPK---FAGSVRSTLAM---- 213
             +K   E    E  +   L +       ++                  V S +A     
Sbjct: 250 GTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAP 309

Query: 214 ---VLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYICS--------SAKLTIQ 262
                 + E      +   + +  VA A   L            +           + + 
Sbjct: 310 RSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLD 369

Query: 263 EMAEFLSAKHPEYPIPNVDSLSE 285
           E  ++L      YPI  +D  +E
Sbjct: 370 EYVDWLIEAG--YPIRRIDDFAE 390

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 76.4 bits (188), Expect = 2e-16
 Identities = 36/243 (14%), Positives = 64/243 (26%), Gaps = 55/243 (22%)

Query: 7   KVCVTGGTGFIGSWLIMRLLD-HGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNAD 65
            V + G  G I   +I +L D      T   R  P                   QI   D
Sbjct: 25  NVLILGAGGQIARHVINQLADKQTIKQTLFAR-QPAKIHKP--------YPTNSQIIMGD 75

Query: 66  LNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFV 125
           + +  +   A+ G   V       D+D                  ++ +      VKR +
Sbjct: 76  VLNHAALKQAMQGQDIVYANLTGEDLDI-------------QANSVIAAMKACD-VKRLI 121

Query: 126 YTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLD 185
           +  S                     ++   K   W  + +       R A +  E  GL+
Sbjct: 122 FVLSLGI-----------------YDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLE 164

Query: 186 LVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEY 245
              L P++                   +   N          ++V    VA     +++ 
Sbjct: 165 YTILRPAW---------LTDEDIIDYELTSRNEPFKG-----TIVSRKSVAALITDIIDK 210

Query: 246 PDA 248
           P+ 
Sbjct: 211 PEK 213

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 76.8 bits (189), Expect = 6e-16
 Identities = 41/284 (14%), Positives = 78/284 (27%), Gaps = 64/284 (22%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           M +QK  + V G TG  G+ LI      G+ V   V    +       L  +P       
Sbjct: 1   MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH-SLKGLIAEE-LQAIPNV----T 54

Query: 61  IFNADL-NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG 119
           +F   L N+    D    G                  E  + +   +       +  ++G
Sbjct: 55  LFQGPLLNNVPLMDTLFEGAHLAFINTTS----QAGDEIAIGKDLAD-------AAKRAG 103

Query: 120 TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFA 179
           T++ ++Y+S      +       +    ++ E+Y+R+L                      
Sbjct: 104 TIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQL---------------------- 141

Query: 180 EEHGLDLVTLIPSF-------VVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHI 232
              GL    +           +  P    +                       +I +  +
Sbjct: 142 ---GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDP--------DIPLPWL 190

Query: 233 D---DVAR-AHIFLLEYPDA-KGRYIC-SSAKLTIQEMAEFLSA 270
           D   DV         + P    G  I  +   L+  ++    S 
Sbjct: 191 DAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSR 234

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 75.3 bits (186), Expect = 1e-15
 Identities = 52/289 (17%), Positives = 97/289 (33%), Gaps = 83/289 (28%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLS--FLTNLPGASERLQIFNA 64
           ++ +TGG G +GS LI   L  G+ +      D     + +      LP     L +   
Sbjct: 22  RILITGGAGCLGSNLIEHWLPQGHEILVI---D-----NFATGKREVLP-PVAGLSVIEG 72

Query: 65  DLNDPESFDAAIAGCA--GVIHVAAPIDIDGKETEEVMTQRA------VNGTIGILKSCL 116
            + D    + A        V+H AA          +     A      V G+I + K+  
Sbjct: 73  SVTDAGLLERAFDSFKPTHVVHSAAAY--------KDPDDWAEDAATNVQGSINVAKAAS 124

Query: 117 KSGTVKRFVYTSSGSTVYFSGKDVDM-LDETF----WSDEDYIRKLDIWGKSYVLTKTLT 171
           K+G VKR +   +    Y  G+   + +        ++             SY ++KT  
Sbjct: 125 KAG-VKRLLNFQTA-LCY--GRPATVPIPIDSPTAPFT-------------SYGISKTAG 167

Query: 172 ERAALEFAEEHGLDLVTLIPSFVVGPF-----ICPKFAGSVRSTLAMVLGNRE------- 219
           E     F     + +V+L  + V GP      I P F          +   ++       
Sbjct: 168 EA----FLMMSDVPVVSLRLANVTGPRLAIGPI-PTF-------YKRLKAGQKCFCSDTV 215

Query: 220 -EYSILLNISMVHIDDVARAHIFLLEYPDAKGRYICSSAK-LTIQEMAE 266
            ++        + + D        L+     G +  S+ +  +I+E+ +
Sbjct: 216 RDF--------LDMSDFLAIADLSLQEGRPTGVFNVSTGEGHSIKEVFD 256

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 75.0 bits (184), Expect = 2e-15
 Identities = 53/300 (17%), Positives = 107/300 (35%), Gaps = 57/300 (19%)

Query: 4   QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR----SDPEHKKDLSFLTNLPGASERL 59
           +K +V + GGTG+IG  ++   +  G+      R    S+ +  + L +   L GA    
Sbjct: 3   KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQL-GA---- 57

Query: 60  QIFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG 119
           ++  A L+D +    A+     VI   A   +       ++ Q        ++++  ++G
Sbjct: 58  KLIEASLDDHQRLVDALKQVDVVISALAGGVLS----HHILEQLK------LVEAIKEAG 107

Query: 120 TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFA 179
            +KRF+ +                   F  D D +      G    + K    RA     
Sbjct: 108 NIKRFLPSE------------------FGMDPDIMEHALQPGSITFIDKRKVRRA----I 145

Query: 180 EEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN----ISMVHIDDV 235
           E   +       ++V        FAGS+      ++  R++  I  +       V  DDV
Sbjct: 146 EAASIP-----YTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDV 200

Query: 236 ARAHIFLLEYPDAKGRYI---CSSAKLTIQEMAEFLSAKHPE----YPIPNVDSLSEIEG 288
               I  ++ P    + +        L+ +E+ +       +      I + D L++++ 
Sbjct: 201 GTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKD 260

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 74.6 bits (184), Expect = 3e-15
 Identities = 48/293 (16%), Positives = 92/293 (31%), Gaps = 41/293 (13%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFV--------TTTVRSDPEHKKDLSFLTNLPGASER 58
            + +TGG GF+GS L     ++             +           L    NL G    
Sbjct: 12  TILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGE 71

Query: 59  LQIFNADLNDPESFD-AAIAGCAGVIHVAAPIDI---DGKETEEVMTQRAVNGTIGILKS 114
             +  AD+N+P             + H AA  D    + +   +          + +L+ 
Sbjct: 72  --VIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKT----NYQAFLNLLEI 125

Query: 115 CLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERA 174
                   + +Y SS   VY +        +            ++    Y  +K   +  
Sbjct: 126 ARSKK--AKVIYASSAG-VYGNT-------KAPNVVGKNESPENV----YGFSKLCMDEF 171

Query: 175 ALEFAEEHGLDLVTLIPSFVVGPFICPKFA-GSVRSTLAMVLGNREEYSILLNISM---- 229
               +  +    V L    V GP    K    S+   LA+     +E  +          
Sbjct: 172 V--LSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDF 229

Query: 230 VHIDDVARAHIFLLEYPDAKGRY-ICSSAKLTIQEMAEFLSAKHPEYPIPNVD 281
           V+I+DV +A++  ++     G Y +  S   +  E+   L     ++ +  + 
Sbjct: 230 VYIEDVIQANVKAMK-AQKSGVYNVGYSQARSYNEIVSILKEHLGDFKVTYIK 281

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 72.5 bits (178), Expect = 4e-15
 Identities = 38/271 (14%), Positives = 74/271 (27%), Gaps = 52/271 (19%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYF--VTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA 64
            V + G +G  G  L+  +L+ G F  VT   R      ++         A + +     
Sbjct: 20  SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE---------AYKNVNQEVV 70

Query: 65  DLNDPESFDAAIAGCAGVIH-VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKR 123
           D    + + +A  G       +       G E    +     +  +   +     G  K 
Sbjct: 71  DFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVD---RDYVLKSAELAKAGG-CKH 126

Query: 124 FVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG 183
           F   SS                   S+  Y++            K   E    E      
Sbjct: 127 FNLLSSKGA-------------DKSSNFLYLQ-----------VKGEVEAKVEEL----K 158

Query: 184 LDLVTLI-PSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFL 242
            D  ++  P  ++      +    +       L          +   V +  V RA +  
Sbjct: 159 FDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSL-----PDSWASGHSVPVVTVVRAMLNN 213

Query: 243 LEYPDAKGRYICSSAKLTIQEMAEFLSAKHP 273
           +  P  K   +  +    I ++ +   +  P
Sbjct: 214 VVRPRDKQMELLENKA--IHDLGKAHGSLKP 242

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 73.4 bits (180), Expect = 5e-15
 Identities = 47/273 (17%), Positives = 91/273 (33%), Gaps = 48/273 (17%)

Query: 5   KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA 64
           + ++ + G TG+IG  +    LD G+     VR                  +    I + 
Sbjct: 4   RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHG 63

Query: 65  DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRF 124
            ++D  S   A+     VI     + I+ +              + I+K+  + GTVKRF
Sbjct: 64  SIDDHASLVEAVKNVDVVISTVGSLQIESQ--------------VNIIKAIKEVGTVKRF 109

Query: 125 VYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGL 184
             +  G+       DVD +     +   +  K  +             R A+   E  G+
Sbjct: 110 FPSEFGN-------DVDNVHAVEPAKSVFEVKAKV-------------RRAI---EAEGI 146

Query: 185 DLVTLIPSFVVGPF---ICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIF 241
               +  +   G F   +      +      ++LG+         +  V  +D+    I 
Sbjct: 147 PYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNAR-----VVFVKEEDIGTFTIK 201

Query: 242 LLEYPDA--KGRYIC-SSAKLTIQEMAEFLSAK 271
            ++ P    K  Y+   +  L++ E+      K
Sbjct: 202 AVDDPRTLNKTLYLRLPANTLSLNELVALWEKK 234

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 74.0 bits (182), Expect = 6e-15
 Identities = 57/294 (19%), Positives = 105/294 (35%), Gaps = 66/294 (22%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSF--LTNLPGASERLQIFNA 64
           KV + G  GFIG  L  R+L+   +    +        D+    L +L    ER+  F  
Sbjct: 26  KVLILGVNGFIGHHLSKRILETTDWEVFGM--------DMQTDRLGDLVK-HERMHFFEG 76

Query: 65  DL-NDPESFDAAIAGCAGVIHVAA---PIDI--DGKETEEVMTQRAVNGTIGILKSCLKS 118
           D+  + E  +  +  C  ++ + A   P           E+         + I++S +K 
Sbjct: 77  DITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFEL----DFEANLPIVRSAVKY 132

Query: 119 GTVKRFVYTSSGSTVYFSGKDVD-MLDETFWSDEDYIRKLDIWGK------SYVLTKTLT 171
           G  K  V+ S+ S VY  G   D   D               +G        Y  +K L 
Sbjct: 133 G--KHLVFPST-SEVY--GMCADEQFDPD---ASAL-----TYGPINKPRWIYACSKQLM 179

Query: 172 ERAALEFAEEHGLDLVTLIPSF-VVGPFICPKFA-----GSVRSTLAMVLGNREEYSILL 225
           +R    +    GL+  TL   F  +GP +   +        V +     +   E     +
Sbjct: 180 DRVIWGYG-MEGLN-FTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEN----I 233

Query: 226 NI--------SMVHIDDVARAHIFLLEYPD--AKGRYI---CSSAKLTIQEMAE 266
           ++        +  ++DD   A + ++E  +  A G+       +   +++E+A 
Sbjct: 234 SLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELAN 287

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 72.1 bits (177), Expect = 2e-14
 Identities = 51/319 (15%), Positives = 91/319 (28%), Gaps = 51/319 (15%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTT---VRSDPEHKKDLSFLTNLPGASERLQIF- 62
           +V V GG G+ G    + L    Y V      VR   +H+  L  LT +    +R+  + 
Sbjct: 13  RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 72

Query: 63  ----------NADLNDPESFDAAIAGCA--GVIHVAA----PIDIDGKETEEVMTQRA-V 105
                       D+ D E    +        V+H       P  +  +    V TQ   V
Sbjct: 73  ALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRS-RAVYTQHNNV 131

Query: 106 NGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVD--MLDETFWSDEDYIRKLDIWGKS 163
            GT+ +L +  + G     V   +         D++   +  T     D +         
Sbjct: 132 IGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSF 191

Query: 164 YVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI 223
           Y L+K           +  G+    L    V G              L   L     +  
Sbjct: 192 YHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEM---HEELRNRLDYDAVFGT 248

Query: 224 LLNI---------------------SMVHIDDVARAHIFLLEYPDAKGRYIC---SSAKL 259
            LN                        + I D  +     +  P   G +      + + 
Sbjct: 249 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQF 308

Query: 260 TIQEMAEFLSAKHPEYPIP 278
           ++ E+A  ++    +  + 
Sbjct: 309 SVNELASLVTKAGSKLGLD 327

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 69.3 bits (169), Expect = 5e-14
 Identities = 30/244 (12%), Positives = 64/244 (26%), Gaps = 54/244 (22%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNAD 65
            + + G  G I   L   LL +    +T   R   + +     + +     ER+ +    
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYGR-QLKTRIPPEIIDH-----ERVTVIEGS 60

Query: 66  LNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFV 125
             +P   + A+     V   A     D     + +++                  ++R +
Sbjct: 61  FQNPGXLEQAVTNAEVVFVGAMESGSDMASIVKALSRXN----------------IRRVI 104

Query: 126 YTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTE-RAALEFAEEHGL 184
             S                       ++   L+ W    +    +   R A     E  L
Sbjct: 105 GVSMAGL-----------------SGEFPVALEKWTFDNLPISYVQGERQARNVLRESNL 147

Query: 185 DLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLE 244
           +   L  +++        +                      N + V  + V +A   +L 
Sbjct: 148 NYTILRLTWLYNDPEXTDYE-------------LIPEGAQFNDAQVSREAVVKAIFDILH 194

Query: 245 YPDA 248
             D 
Sbjct: 195 AADE 198

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 69.4 bits (170), Expect = 1e-13
 Identities = 49/223 (21%), Positives = 84/223 (37%), Gaps = 37/223 (16%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           +V + G  GFIG+ L  RLL   ++    +  D        FL +             D+
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYEVYGL--DIGSDAISRFLNH-----PHFHFVEGDI 54

Query: 67  NDP-ESFDAAIAGCAGVIHVAA---PIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           +   E  +  +  C  V+ + A   PI+   +     E+         + I++ C+K   
Sbjct: 55  SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL----DFEENLRIIRYCVKYR- 109

Query: 121 VKRFVYTSSGSTVYFSGK-DVDMLDETFWSDE----DYIRKLDIWGKSYVLTKTLTERAA 175
            KR ++ S+ S VY  G       DE   +      +  R    W   Y ++K L +R  
Sbjct: 110 -KRIIFPST-SEVY--GMCSDKYFDEDHSNLIVGPVNKPR----W--IYSVSKQLLDRVI 159

Query: 176 LEFAEEHGLDLVTLIPSF-VVGPFICPKFAGSVRSTLAMVLGN 217
             + E+ GL   TL   F  +GP +    A  + S  +  +  
Sbjct: 160 WAYGEKEGLQ-FTLFRPFNWMGPRLDNLNAARIGS--SRAITQ 199

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 67.4 bits (165), Expect = 2e-13
 Identities = 54/271 (19%), Positives = 86/271 (31%), Gaps = 63/271 (23%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYF--VTTTVRSD-PEHKKDLSFLTNLPGASE 57
           M     +V + G TG  G  L+ R+L       V    R    EH +    L N  G   
Sbjct: 1   MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPR----LDNPVG--- 53

Query: 58  RLQIFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAV--NGTIGILKSC 115
              +         S D A   C G     A      +E       RAV  +  + + K  
Sbjct: 54  --PLAELLPQLDGSIDTAFC-CLGTTIKEAG----SEE-----AFRAVDFDLPLAVGKRA 101

Query: 116 LKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAA 175
           L+ G  + ++  S+       G D         S   Y R            K   E+A 
Sbjct: 102 LEMG-ARHYLVVSAL------GADAK-------SSIFYNR-----------VKGELEQAL 136

Query: 176 LEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDV 235
            E        L    PS + GP    + A  + + +A +L  +           +   D+
Sbjct: 137 QEQGWPQ---LTIARPSLLFGPREEFRLAEILAAPIARILPGK--------YHGIEACDL 185

Query: 236 ARAHIFLLEYPDAKGRYICSSAKLTIQEMAE 266
           ARA   L        R++ S     ++++ +
Sbjct: 186 ARALWRLALEEGKGVRFVESDE---LRKLGK 213

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 68.9 bits (168), Expect = 2e-13
 Identities = 43/280 (15%), Positives = 83/280 (29%), Gaps = 48/280 (17%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQ 60
           +   KG+V + G TGFIG ++    LD         R  P           L    +   
Sbjct: 6   VPSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKAL--EDKGAI 63

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           I    +N+ E+ +  +     +  V + +  +    +           I ++K+    GT
Sbjct: 64  IVYGLINEQEAMEKILKE-HEIDIVVSTVGGESILDQ-----------IALVKAMKAVGT 111

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           +KRF+ +  G        DV+  D        Y  K  +                 +  E
Sbjct: 112 IKRFLPSEFGH-------DVNRADPVEPGLNMYREKRRVR----------------QLVE 148

Query: 181 EHGLDLVTLIPSFVVG---PFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVAR 237
           E G+    +  + +                 +    + G+            V   D+ +
Sbjct: 149 ESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVK-----AYFVAGTDIGK 203

Query: 238 AHIFLLEYPDAKGRYI---CSSAKLTIQEMAEFLSAKHPE 274
             +  ++      + +    S   L I E+A     K   
Sbjct: 204 FTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGR 243

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 68.4 bits (167), Expect = 3e-13
 Identities = 41/277 (14%), Positives = 82/277 (29%), Gaps = 48/277 (17%)

Query: 4   QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
              K+ + GGTG+IG +++   L   +      R         S        S  + I  
Sbjct: 3   HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIE 62

Query: 64  ADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKR 123
            ++ + E   + +     VI       I  +              I I+ +   +G +KR
Sbjct: 63  GEMEEHEKMVSVLKQVDIVISALPFPMISSQ--------------IHIINAIKAAGNIKR 108

Query: 124 FVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG 183
           F+ +  G                   +ED I+ L  +           +R      E   
Sbjct: 109 FLPSDFG------------------CEEDRIKPLPPFESVLE-----KKRIIRRAIEAAA 145

Query: 184 LDLVTLIPSFVVG---PFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI 240
           L    +  +        ++        R+   ++ G  E         + + +D+A+  I
Sbjct: 146 LPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETK-----FVLNYEEDIAKYTI 200

Query: 241 FLLEYPDAKGRYIC---SSAKLTIQEMAEFLSAKHPE 274
            +   P    R +        ++  E+     AK   
Sbjct: 201 KVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGL 237

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 67.0 bits (164), Expect = 1e-12
 Identities = 44/254 (17%), Positives = 82/254 (32%), Gaps = 52/254 (20%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
            V +TG  G +G  L  +L   G+ V   VR +             P   +R        
Sbjct: 149 TVAITGSRGLVGRALTAQLQTGGHEVIQLVRKE-------------PKPGKRF------W 189

Query: 67  NDPESFDAAIAGCAGVIHVA-APIDIDGKETE----EVMTQRAVNGTIGILKSCLKSGTV 121
           +        + G   ++H+A  P  I G+  +     +   R V  T  + +   +S   
Sbjct: 190 DPLNPASDLLDGADVLVHLAGEP--IFGRFNDSHKEAIRESR-VLPTKFLAELVAESTQC 246

Query: 122 KRFVYTSSGSTV--YFSGKDVDMLDETFWSDEDYIRKL-DIWGKSYVLTKTLTERAALEF 178
              +   S S V  Y   +  ++L E   S +D++ ++   W           E A    
Sbjct: 247 TTMI---SASAVGFYGHDRGDEILTEESESGDDFLAEVCRDW-----------EHATAP- 291

Query: 179 AEEHGLDLVTLIPSFVVGPF--ICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVA 236
           A + G  +  +     +     + P       + L    G+   +      S + IDD+ 
Sbjct: 292 ASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSW-----FSWIAIDDLT 346

Query: 237 RAHIFLLEYPDAKG 250
             +   +      G
Sbjct: 347 DIYYRAIVDAQISG 360

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 48/267 (17%), Positives = 93/267 (34%), Gaps = 58/267 (21%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNAD 65
            + +TG TG +G+ +  + + +        VR + E   D            ++ +   D
Sbjct: 2   NIMLTGATGHLGTHITNQAIANHIDHFHIGVR-NVEKVPDD--------WRGKVSVRQLD 52

Query: 66  LNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFV 125
             + ES   A  G   V+ + + I    K   EV     +      + +  +SG V   +
Sbjct: 53  YFNQESMVEAFKGMDTVVFIPSIIHPSFKRIPEV---ENL------VYAAKQSG-VAHII 102

Query: 126 YTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLD 185
           +    +  + +      +   F      +    I    Y     +  R A+ + +     
Sbjct: 103 FIGYYADQHNN---PFHMSPYFGYASRLLSTSGI---DYTY---V--RMAM-YMD----P 146

Query: 186 LVTLIPSFVV-GPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLE 244
           L   +P  +     I P  AG  R                  I+ +  +D+AR  I +++
Sbjct: 147 LKPYLPELMNMHKLIYP--AGDGR------------------INYITRNDIARGVIAIIK 186

Query: 245 YPDAKGR-YICSSAKLTIQEMAEFLSA 270
            PD  G+ Y+ S     ++E+A  LS 
Sbjct: 187 NPDTWGKRYLLSGYSYDMKELAAILSE 213

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 60.5 bits (147), Expect = 1e-10
 Identities = 42/196 (21%), Positives = 80/196 (40%), Gaps = 38/196 (19%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVT-----TTVRSDPEHKKDLSFLTNLPGA 55
           ME+ + ++ +TGG GF+GS L  +L+  G+ VT      T R     K+++         
Sbjct: 23  MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGR-----KRNVEHWIGHE-- 75

Query: 56  SERLQIFNADLNDPESFDAAIAGCAGVIHVAA---PIDIDGKETEEVMTQRAVNGTIGIL 112
               ++ N D+ +P   +        + H+A+   P +      + + T     GT+ +L
Sbjct: 76  --NFELINHDVVEPLYIE-----VDQIYHLASPASPPNYMYNPIKTLKT--NTIGTLNML 126

Query: 113 KSCLKSGTVKRFVYTSSGSTVYFSGK-DVDMLDETFWSDEDYIRKLDIWGK--SYVLTKT 169
               + G   R +  S+ S VY  G  +V    E +W        ++  G    Y   K 
Sbjct: 127 GLAKRVG--ARLLLAST-SEVY--GDPEVHPQSEDYW------GHVNPIGPRACYDEGKR 175

Query: 170 LTERAALEFAEEHGLD 185
           + E     + ++ G++
Sbjct: 176 VAETMCYAYMKQEGVE 191

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 58.2 bits (141), Expect = 1e-09
 Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 41/154 (26%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTT---VRSDPEHKKDLSFLTNLPGASE 57
            E     V VTGG G+IGS  ++ L+++GY          S  +    L  LT       
Sbjct: 7   SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK-----H 61

Query: 58  RLQIFNADLNDPESFDAAIA--GCAGVIHVAAPIDIDGKETEEVMTQRAV---------- 105
            +  +  DL D +  +          VIH A                +AV          
Sbjct: 62  HIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAG--------------LKAVGESTQIPLRY 107

Query: 106 -----NGTIGILKSCLKSGTVKRFVYTSSGSTVY 134
                 GT+ +L+   +   V +FV++SS +TVY
Sbjct: 108 YHNNILGTVVLLELMQQYN-VSKFVFSSS-ATVY 139

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 56.8 bits (137), Expect = 3e-09
 Identities = 34/129 (26%), Positives = 49/129 (37%), Gaps = 8/129 (6%)

Query: 5   KGK-VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
           +GK V VTG TGF G WL + L   G  V             L     +   ++ +Q   
Sbjct: 8   QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSL-TAPTVPSLFETARV---ADGMQSEI 63

Query: 64  ADLNDPESFDAAIAGCA--GVIHVAA-PIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
            D+ D      +I       V H+AA P+               V GT+ +L++    G 
Sbjct: 64  GDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGG 123

Query: 121 VKRFVYTSS 129
           VK  V  +S
Sbjct: 124 VKAVVNITS 132

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score = 56.4 bits (137), Expect = 3e-09
 Identities = 40/156 (25%), Positives = 56/156 (35%), Gaps = 47/156 (30%)

Query: 5   KGKVCVTGGTGFIGSWLIMRLLDHGYFV---------TTTVRSDPEHKKDLSFLTNLPGA 55
             KV VTGG G+IGS  ++ LL+ GY                S PE  + +  LT     
Sbjct: 2   AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG---- 57

Query: 56  SERLQIFNADLNDPESFDAAIA--GCAGVIHVAAPIDIDGKETEEVMTQRAV-------- 105
              ++    D+ D  +            VIH A                +AV        
Sbjct: 58  -RSVEFEEMDILDQGALQRLFKKYSFMAVIHFAG--------------LKAVGESVQKPL 102

Query: 106 -------NGTIGILKSCLKSGTVKRFVYTSSGSTVY 134
                   GTI +L+     G VK  V++SS +TVY
Sbjct: 103 DYYRVNLTGTIQLLEIMKAHG-VKNLVFSSS-ATVY 136

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 55.7 bits (134), Expect = 5e-09
 Identities = 49/330 (14%), Positives = 104/330 (31%), Gaps = 67/330 (20%)

Query: 5   KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA 64
            G +   G  G+    L   L   G+ +  T R+ P+  + +       GA    +    
Sbjct: 5   TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRN-PDQMEAIRAS----GA----EPLLW 54

Query: 65  DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRF 124
              +P     ++ G   ++   AP        + V+   A+   I    +       +  
Sbjct: 55  PGEEP-----SLDGVTHLLISTAP----DSGGDPVL--AALGDQIAARAA-----QFRWV 98

Query: 125 VYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGL 184
            Y S+ + VY    D   +DET        R            +        ++     L
Sbjct: 99  GYLSTTA-VY-GDHDGAWVDETTPLTPTAAR-----------GRWRVMAEQ-QWQAVPNL 144

Query: 185 DLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI--LLNISMVHIDDVARAHIFL 242
            L     + + GP          R   + +        I      S +H++D+A+     
Sbjct: 145 PLHVFRLAGIYGP---------GRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAAS 195

Query: 243 LEYPDAKGRY-ICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSA-------- 293
           +  PD    Y +C    +  Q++  +  A+    P+P      + +   ++         
Sbjct: 196 MARPDPGAVYNVCDDEPVPPQDVIAYA-AELQGLPLPPAVDFDKADLTPMARSFYSENKR 254

Query: 294 LSSKKL---LDICF---TYKYGIDEMFDGA 317
           + + ++   L +      Y+ G++ +   A
Sbjct: 255 VRNDRIKEELGVRLKYPNYRVGLEALQADA 284

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 55.4 bits (134), Expect = 5e-09
 Identities = 56/266 (21%), Positives = 97/266 (36%), Gaps = 60/266 (22%)

Query: 10  VTGGTGFIGSWLIMRLLDH--GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           VTG TG +G  +I  LL       +   VR + E    L        A + +++ + D N
Sbjct: 5   VTGATGQLGGLVIQHLLKKVPASQIIAIVR-NVEKASTL--------ADQGVEVRHGDYN 55

Query: 68  DPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYT 127
            PES   A AG + ++ ++ P       T  ++    V      +K+   +G VK   YT
Sbjct: 56  QPESLQKAFAGVSKLLFISGP---HYDNTLLIVQHANV------VKAARDAG-VKHIAYT 105

Query: 128 SSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLV 187
                  F+ + +  L     + E  IR        Y     L  R AL + +     + 
Sbjct: 106 GYA----FAEESIIPLAHVHLATEYAIRTT---NIPYTF---L--RNAL-YTD---FFVN 149

Query: 188 TLIPSFVV-GPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP 246
             + +    G  +    AGS                    ++ V  +++A A   +L   
Sbjct: 150 EGLRASTESGAIVTN--AGSGI------------------VNSVTRNELALAAATVLTEE 189

Query: 247 DAKGR-Y-ICSSAKLTIQEMAEFLSA 270
             + + Y + S+   T  E+A+ LS 
Sbjct: 190 GHENKTYNLVSNQPWTFDELAQILSE 215

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341

 Score = 54.4 bits (132), Expect = 2e-08
 Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 41/152 (26%)

Query: 3   EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTT---VRSDPEHKKDLSFLTNLPGASERL 59
             KG + VTGG G+IGS   + LL HGY V      V S  E    +  +T      +  
Sbjct: 3   STKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITG-----KTP 57

Query: 60  QIFNADLNDPESFDAAIA--GCAGVIHVAAPIDIDGKETEEVMTQRAV------------ 105
                D++D  +             IH AA               +AV            
Sbjct: 58  AFHETDVSDERALARIFDAHPITAAIHFAA--------------LKAVGESVAKPIEYYR 103

Query: 106 ---NGTIGILKSCLKSGTVKRFVYTSSGSTVY 134
              +  + +L+   +   VKR V++SS +TVY
Sbjct: 104 NNLDSLLSLLRVMRERA-VKRIVFSSS-ATVY 133

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 50/267 (18%), Positives = 96/267 (35%), Gaps = 65/267 (24%)

Query: 10  VTGGTGFIGSWLIMRLLDH--GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           +TG TG +G ++I  L+       +   VR +P   + L        A++ + +  AD  
Sbjct: 4   ITGATGQLGHYVIESLMKTVPASQIVAIVR-NPAKAQAL--------AAQGITVRQADYG 54

Query: 68  DPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQ-RAVNGTIGILKSCLKSGTVKRFVY 126
           D  +  +A+ G   ++ +++       E  +   Q R V      + +   +G VK   Y
Sbjct: 55  DEAALTSALQGVEKLLLISSS------EVGQRAPQHRNV------INAAKAAG-VKFIAY 101

Query: 127 TSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDL 186
           TS    +  +      L +     E  +    I    Y L   L  R    ++E    + 
Sbjct: 102 TS----LLHADTSPLGLADEHIETEKMLADSGI---VYTL---L--RNGW-YSE----NY 144

Query: 187 VTLIPSFVV-GPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEY 245
           +   P+ +  G FI    AG  +                  I+     D A A   ++  
Sbjct: 145 LASAPAALEHGVFIGA--AGDGK------------------IASATRADYAAAAARVISE 184

Query: 246 PDAKGR-YICS-SAKLTIQEMAEFLSA 270
              +G+ Y  +  +  T+ ++A  L+ 
Sbjct: 185 AGHEGKVYELAGDSAWTLTQLAAELTK 211

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338

 Score = 52.1 bits (126), Expect = 8e-08
 Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 23/139 (16%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTT---VRSDPEHKKDLSFLTNLPGASERLQIFN 63
           +V VTGG+G+IGS   ++LL +G+ V        S       +  L       +      
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG-----KHPTFVE 56

Query: 64  ADLNDPESFDAAIA--GCAGVIHVAAPIDIDGKETEEVMTQRA------VNGTIGILKSC 115
            D+ +       +       VIH A       K   E + +        VNGT+ ++ + 
Sbjct: 57  GDIRNEALMTEILHDHAIDTVIHFAGL-----KAVGESVQKPLEYYDNNVNGTLRLISAM 111

Query: 116 LKSGTVKRFVYTSSGSTVY 134
             +  VK F+++SS +TVY
Sbjct: 112 RAAN-VKNFIFSSS-ATVY 128

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.2 bits (124), Expect = 1e-07
 Identities = 59/429 (13%), Positives = 124/429 (28%), Gaps = 127/429 (29%)

Query: 1   MEEQKGK-VCVTGGTGFIGSWL---------IMRLLDHGYF-----------------VT 33
           +E +  K V + G  G   +W+         +   +D   F                   
Sbjct: 145 LELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK 204

Query: 34  TTVRSDPEHKKDLSFLTNLP----GASERLQIF-------NA-----DLNDPESFDAAIA 77
              + DP         +N+          L+         N      ++ + ++++A   
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL 264

Query: 78  GC-----------AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCL--KSGTVKRF 124
            C              +  A    I        +T         +L   L  +   + R 
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE---VKSLLLKYLDCRPQDLPRE 321

Query: 125 VYTSSGSTVYFSGKDV-DMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG 183
           V T++   +    + + D L    W   D  + ++    + ++  +L     LE AE   
Sbjct: 322 VLTTNPRRLSIIAESIRDGLAT--W---DNWKHVNCDKLTTIIESSL---NVLEPAEYRK 373

Query: 184 L--DLV-----TLIPSFVVG-------PFICPKFAGSVRSTLAMVLGNREEYSI-LLNIS 228
           +   L        IP+ ++                  +    ++V    +E +I + +I 
Sbjct: 374 MFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHK-YSLVEKQPKESTISIPSIY 432

Query: 229 M---VHIDDVARAHIFLLE-Y------------PDAKGRYICS--SAKLTIQEMAE---- 266
           +   V +++    H  +++ Y            P    +Y  S     L   E  E    
Sbjct: 433 LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTL 492

Query: 267 ---------FLSAK--HPEYPI----PNVDSLSEIEGYKLSALSSKKLLDICFTYKYGID 311
                    FL  K  H           +++L +++ YK        + D    Y+  ++
Sbjct: 493 FRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYK------PYICDNDPKYERLVN 546

Query: 312 EMFDGAIKC 320
            + D   K 
Sbjct: 547 AILDFLPKI 555

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 9e-04
 Identities = 48/314 (15%), Positives = 89/314 (28%), Gaps = 99/314 (31%)

Query: 21  LIMRLLDHG-----YFVTTTVRSDPEHKKDLSFL-------TNLPGASERLQIFNAD--L 66
           L   LL         FV          + +  FL          P    R+ I   D   
Sbjct: 67  LFWTLLSKQEEMVQKFVEEV------LRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQR-----AVNGTIGILKSCLKSGTV 121
           ND + F           +V+       K  + ++  R      ++G +G  K+ +     
Sbjct: 121 NDNQVFAK--------YNVSRLQPYL-KLRQALLELRPAKNVLIDGVLGSGKTWVALDVC 171

Query: 122 KRFVYTSSGSTVYFSGKDVDMLDETFW-------SDEDYIRKLDIWGKSYVLTKTLTERA 174
             +                 M  + FW       S E  +  L      Y +    T R+
Sbjct: 172 LSYKVQCK------------MDFKIFWLNLKNCNSPETVLEML--QKLLYQIDPNWTSRS 217

Query: 175 ALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDD 234
                 +  +                     S+++ L  +L ++  Y   L +    + +
Sbjct: 218 DHSSNIKLRIH--------------------SIQAELRRLLKSK-PYENCLLV----LLN 252

Query: 235 VARAHIFLLEYPDAKGRYICSSAKLTI----QEMAEFLSAKHPEYP--IPNVDSLSEIEG 288
           V  A        +      C   K+ +    +++ +FLSA    +     +  +L+  E 
Sbjct: 253 VQNAKA--WNAFNLS----C---KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303

Query: 289 YKLSALSSKKLLDI 302
             L      K LD 
Sbjct: 304 KSLLL----KYLDC 313

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score = 49.5 bits (119), Expect = 5e-07
 Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 20/132 (15%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTT----TVRSDPEHKKDLSFLTNLPGASERLQIF 62
           K+ +TGG GF+GS L    L  G  +      + +   ++   LS       +    +  
Sbjct: 3   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-------SLGNFEFV 55

Query: 63  NADLNDPESFDAAIAGCA--GVIHVAAP--ID--IDGKETEEVMTQRAVNGTIGILKSCL 116
           + D+ +       I         H+A    +   ID     +      V GT+ +L++  
Sbjct: 56  HGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPC-MDFEIN--VGGTLNLLEAVR 112

Query: 117 KSGTVKRFVYTS 128
           +  +    +Y+S
Sbjct: 113 QYNSNCNIIYSS 124

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 49.0 bits (118), Expect = 9e-07
 Identities = 30/141 (21%), Positives = 49/141 (34%), Gaps = 34/141 (24%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGAS-----ERLQI 61
            + + GG G+IGS  + +L+D G  V                + NL         E  + 
Sbjct: 3   SILICGGAGYIGSHAVKKLVDEGLSVVV--------------VDNLQTGHEDAITEGAKF 48

Query: 62  FNADLNDPESFDAAIA--GCAGVIHVAAPIDIDGKETEEVMTQRA------VNGTIGILK 113
           +N DL D               V+H AA            M +        V G + +L+
Sbjct: 49  YNGDLRDKAFLRDVFTQENIEAVMHFAA-----DSLVGVSMEKPLQYYNNNVYGALCLLE 103

Query: 114 SCLKSGTVKRFVYTSSGSTVY 134
              +   V +F++ SS +  Y
Sbjct: 104 VMDEFK-VDKFIF-SSTAATY 122

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 63/304 (20%), Positives = 108/304 (35%), Gaps = 54/304 (17%)

Query: 2   EEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQI 61
             ++ +V + G  GFIG+ L  RLL   ++    +  D        FL +          
Sbjct: 312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGL--DIGSDAISRFLNH-----PHFHF 364

Query: 62  FNADL-NDPESFDAAIAGCAGVIHVAA----------PIDIDGKETEEVMTQRAVNGTIG 110
              D+    E  +  +  C  V+ + A          P+ +   + EE          + 
Sbjct: 365 VEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE---------NLR 415

Query: 111 ILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWS-DEDYIRKLDIWGKSYVLTKT 169
           I++ C+K    KR ++ S+ S VY    D    DE   +     + K   W   Y ++K 
Sbjct: 416 IIRYCVKYR--KRIIFPST-SEVYGMCSD-KYFDEDHSNLIVGPVNK-PRW--IYSVSKQ 468

Query: 170 LTERAALEFAEEHGLDLVTLIPSFVVGP---FICPKFAGSVRSTLAMVLGN--REEYSIL 224
           L +R    + E+ GL      P   +GP    +     GS R+ +  ++ N        L
Sbjct: 469 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRA-ITQLILNLVEGSPIKL 527

Query: 225 LNI-----SMVHIDDVARAHIFLLEYPD--AKGRYI---CSSAKLTIQEMAEFL---SAK 271
           ++          I D   A   ++E       G  I       + +I+E+ E L     K
Sbjct: 528 IDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEK 587

Query: 272 HPEY 275
           HP  
Sbjct: 588 HPLR 591

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 28/152 (18%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 7   KVCVTGGTGFIGSWLIMRLL-DHGYFVTT--------------TVRSDPEHKKDLSFLTN 51
           +V V GG G+IGS  +  LL D  + V                  R +   K   S    
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Query: 52  LPGASERLQIFNADLNDPESFDAAIA---GCAGVIHVAAPIDIDGKETEEVMTQRA---- 104
            P A     +   D+ + +  +           V+H+ A          E +        
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAF-----LAVGESVRDPLKYYD 118

Query: 105 --VNGTIGILKSCLKSGTVKRFVYTSSGSTVY 134
             V G + +L++ L      + ++ SS + ++
Sbjct: 119 NNVVGILRLLQAMLLHK-CDKIIF-SSSAAIF 148

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337

 Score = 47.1 bits (113), Expect = 3e-06
 Identities = 45/160 (28%), Positives = 65/160 (40%), Gaps = 32/160 (20%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLT------NLPG--ASER 58
           ++ VTGG GFIGS  + +LL   Y          +    L  LT      NL    A  R
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAY-----PDVPADEVIVLDSLTYAGNRANLAPVDADPR 56

Query: 59  LQIFNADLNDPESFDAAIAGCAGVIHVAAP--ID--IDGKETEEVMTQRAVNGTIGILKS 114
           L+  + D+ D       + G   ++H AA   +D  I G       T   V GT  +L+ 
Sbjct: 57  LRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGAS-VFTETN--VQGTQTLLQC 113

Query: 115 CLKSGTVKRFVYTSSGST--VYFSGKDVDMLDETFWSDED 152
            + +G V R V+    ST  VY S      +D   W++  
Sbjct: 114 AVDAG-VGRVVHV---STNQVYGS------IDSGSWTESS 143

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 16/132 (12%)

Query: 5   KGK-VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD---LSFLTNLPGASERLQ 60
             + + +TGGTG  G   + ++LD        V S  E K+    + F         R++
Sbjct: 20  DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEF------NDPRMR 73

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKE---TEEVMTQRAVNGTIGILKSCLK 117
            F  D+ D E  + A+ G    IH AA   +   E    E + T   + G   ++ +CLK
Sbjct: 74  FFIGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTN--IMGASNVINACLK 131

Query: 118 SGTVKRFVYTSS 129
           +  + + +  S+
Sbjct: 132 NA-ISQVIALST 142

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} Length = 525

 Score = 43.2 bits (102), Expect = 7e-05
 Identities = 22/103 (21%), Positives = 34/103 (33%), Gaps = 18/103 (17%)

Query: 6   GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASE------ 57
           G V VTG      +    RL   G  + +  T  S  E  +  S      G +       
Sbjct: 252 GTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELA 311

Query: 58  ----RLQIFNADLNDPESFDAAIAGCA------GVIHVAAPID 90
                  +   DL D E+    +AG +       V+H+   +D
Sbjct: 312 DLGATATVVTCDLTDAEAAARLLAGVSDAHPLSAVLHLPPTVD 354

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 36/134 (26%), Positives = 51/134 (38%), Gaps = 24/134 (17%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLT------NLPGA--SER 58
           K+ VTGG GFIGS  I  +L+                  +  L       NL       R
Sbjct: 5   KLLVTGGMGFIGSNFIRYILEKHPDWEVIN---------IDKLGYGSNPANLKDLEDDPR 55

Query: 59  LQIFNADLNDPESFDAAIAGCAGVIHVAAP--ID--IDGKETEEVMTQRAVNGTIGILKS 114
                 D+ D E     +    GV+H+AA   +D  I   E   + +   V GT  +L+S
Sbjct: 56  YTFVKGDVADYELVKELVRKVDGVVHLAAESHVDRSISSPE-IFLHSN--VIGTYTLLES 112

Query: 115 CLKSGTVKRFVYTS 128
             +     RFV+ S
Sbjct: 113 IRRENPEVRFVHVS 126

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348

 Score = 42.1 bits (100), Expect = 1e-04
 Identities = 37/140 (26%), Positives = 55/140 (39%), Gaps = 28/140 (20%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK-KDLSFLT------NLP 53
           M + K  + VTGG GFIGS           FV     + P+     L  LT      NL 
Sbjct: 1   MSQFK-NIIVTGGAGFIGS----------NFVHYVYNNHPDVHVTVLDKLTYAGNKANLE 49

Query: 54  G-ASERLQIFNADLNDPESFDAAIAGCAGVIHVAAP--ID--IDGKETEEVMTQRAVNGT 108
               +R+++   D+ D E  D   A    ++H AA    D  ++      + T     GT
Sbjct: 50  AILGDRVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPS-PFIHTN--FIGT 106

Query: 109 IGILKSCLKSGTVKRFVYTS 128
             +L++  K     RF + S
Sbjct: 107 YTLLEAARKYD--IRFHHVS 124

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	327
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	100.0
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	100.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	100.0
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	100.0
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	100.0
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	100.0
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	100.0
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.97
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.97
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.97
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.97
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.97
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.97
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.97
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.97
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.97
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.96
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.96
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.95
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.95
1spx_A	278	Short-chain reductase family member (5L265); paral	99.95
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.95
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.95
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.95
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.95
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.94
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.94
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.94
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.94
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.94
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.94
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.94
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.94
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.94
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.94
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.94
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.94
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.94
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.94
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.94
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.94
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.94
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.94
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.94
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.94
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.94
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.94
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.94
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.94
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.94
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.94
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.94
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.93
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.93
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.93
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.93
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.93
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.93
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.93
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.93
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.93
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.93
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.93
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.93
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.93
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.93
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.93
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.93
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.93
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.93
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.93
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.93
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.93
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.93
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.93
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.93
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.93
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.93
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.93
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.93
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.93
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.93
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.93
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.93
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.93
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.93
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.93
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.93
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.93
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.93
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.93
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.92
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.92
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.92
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.92
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.92
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.92
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.92
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.92
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.92
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.92
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.92
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.92
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.92
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.92
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.92
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.92
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.92
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.92
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.92
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.92
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.92
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.92
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.92
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.92
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.92
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.92
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.92
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.92
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.92
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.92
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.92
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.92
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.92
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.92
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.92
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.92
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.92
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.92
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.92
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.92
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.92
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.92
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.92
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.92
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.92
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.91
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.91
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.91
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.91
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.91
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.91
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.91
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.91
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.91
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.91
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.91
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.91
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.91
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.91
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.91
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.91
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.91
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.91
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.91
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.91
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.91
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.91
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.91
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.91
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.91
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.91
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.91
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.91
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.91
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.91
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.91
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.91
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.91
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.91
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.91
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.91
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.91
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.91
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.91
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.91
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.91
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.91
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.91
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.9
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.9
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.9
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.9
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.9
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.9
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.9
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.9
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.9
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.9
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.9
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.9
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.9
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.9
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.9
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.89
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.89
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.89
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.89
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.89
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.89
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.89
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.89
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.89
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.88
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.88
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.88
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.88
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.88
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.88
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.87
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.87
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.87
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.87
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.86
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.86
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.86
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.86
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.86
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.85
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.85
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.84
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.84
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.83
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.83
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.82
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.82
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.8
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.75
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.75
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.74
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.74
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.71
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.64
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.63
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.61
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.6
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.59
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.57
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.55
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.53
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.51
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.47
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.38
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.28
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.25
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.25
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	99.03
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.03
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.89
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.88
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.81
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.8
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.79
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.75
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.75
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.71
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.66
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.65
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.64
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.59
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.53
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.51
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.48
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.48
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.43
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	98.38
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.34
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.31
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.28
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	98.27
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.24
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.22
3tl2_A	315	Malate dehydrogenase; center for structural genomi	98.22
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	98.19
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.15
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	98.15
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	98.11
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	98.08
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	98.07
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	98.05
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	98.04
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	98.03
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.99
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.96
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.95
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.95
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.95
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.85
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.84
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.84
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.83
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.82
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.8
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.78
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.77
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.77
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.76
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.76
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.75
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.73
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.72
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.71
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.68
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.68
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.67
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.65
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.64
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.63
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.63
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.62
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.6
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.58
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.57
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.54
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.53
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.53
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.53
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.52
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.51
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.5
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.5
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.49
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.48
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.47
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.45
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.45
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.42
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.39
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.37
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	97.35
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.34
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.34
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.33
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.33
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	97.33
1lnq_A	336	MTHK channels, potassium channel related protein;	97.33
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	97.32
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.31
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.29
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.29
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.27
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.27
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.26
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	97.25
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.25
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.25
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.23
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.22
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	97.21
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.21
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.19
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.18
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.17
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.17
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.16
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.16
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.12
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.1
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.09
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.09
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.08
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.03
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	97.01
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.01
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.01
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	97.0
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.0
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.99
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	96.97
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.96
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	96.93
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.93
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.91
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	96.91
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	96.91
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.9
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.9
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.86
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.85
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.85
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.85
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.85
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	96.84
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	96.81
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.79
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.77
1s6y_A	450	6-phospho-beta-glucosidase; hydrolase, structural	96.75
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.75
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	96.75
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.74
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.74
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	96.73
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.72
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	96.7
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	96.7
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	96.7
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.69
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.69
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.69
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	96.68
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.64
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	96.64
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.64
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.64
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.62
4ezb_A	317	Uncharacterized conserved protein; structural geno	96.62
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	96.61
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.61
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	96.6
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.6
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.59
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	96.58
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.58
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.58
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.58
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	96.57
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.56
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.55
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.55
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.55
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.54
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.54
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.52
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.51
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.48
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	96.48
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.47
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.47

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=3.2e-50  Score=354.03  Aligned_cols=324  Identities=44%  Similarity=0.821  Sum_probs=239.9

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      |..++++||||||+||||++++++|+++|++|++++| ++........+........+++++.+|++|++++.++++++|
T Consensus         1 ~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   79 (337)
T 2c29_D            1 MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVR-DPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCT   79 (337)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCS
T ss_pred             CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEC-CcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCC
Confidence            6667789999999999999999999999999999999 443322222221111001257899999999999999999999


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      +|||+|+.......++..+.+++|+.++.+++++|++.+.+++|||+||..+++.......+++|+++...+...+...+
T Consensus        80 ~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  159 (337)
T 2c29_D           80 GVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMT  159 (337)
T ss_dssp             EEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT
T ss_pred             EEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCc
Confidence            99999987644333444468999999999999999987547899999999855423333456888877655443333345


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHH
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI  240 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  240 (327)
                      .++|+.+|.++|.++..++++++++++++||+++|||+........+........+....+.......|+|++|+|++++
T Consensus       160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~  239 (337)
T 2c29_D          160 AWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHI  239 (337)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHH
Confidence            67899999999999999887789999999999999998654333332222122334333232223346999999999999


Q ss_pred             HhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCccc-ccccccccChHHHHhccccccccHHHHHHHHHH
Q 020334          241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEI-EGYKLSALSSKKLLDICFTYKYGIDEMFDGAIK  319 (327)
Q Consensus       241 ~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~  319 (327)
                      ++++++...+.|+++++.+|++|+++.+.+.++...+|.  .+... .......+|++|+++|||+|+++++|+|+++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~  317 (337)
T 2c29_D          240 YLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPT--EFKGVDENLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVD  317 (337)
T ss_dssp             HHHHCTTCCEEEEECCEEEEHHHHHHHHHHHCTTSCCCS--CCTTCCTTCCCCEECCHHHHHHTCCCCCCHHHHHHHHHH
T ss_pred             HHhcCcccCceEEEeCCCCCHHHHHHHHHHHCCCccCCC--CCCcccCCCccccccHHHHHHcCCCcCCCHHHHHHHHHH
Confidence            999887667789888778999999999999886444443  11111 233456789999988999999999999999999


Q ss_pred             HHHHcCCC
Q 020334          320 CCKERGYL  327 (327)
Q Consensus       320 ~~~~~~~~  327 (327)
                      |+++.|++
T Consensus       318 ~~~~~~~~  325 (337)
T 2c29_D          318 TCRAKGLL  325 (337)
T ss_dssp             HHHHTTSS
T ss_pred             HHHHcCCC
Confidence            99998764

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=5e-49  Score=344.22  Aligned_cols=321  Identities=57%  Similarity=1.027  Sum_probs=232.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +|+|||||||||||++++++|+++|++|++++|+++........+........+++++.+|++|++++.++++++|+|||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   80 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH   80 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence            47899999999999999999999999999998822211111111111110012578899999999999999999999999


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhc-CCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchh
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKS-GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS  163 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  163 (327)
                      +|+.......++..+++++|+.++.+++++|++. + +++|||+||..+++..+....+++|+++...+...+..+..++
T Consensus        81 ~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~  159 (322)
T 2p4h_X           81 TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT-VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWN  159 (322)
T ss_dssp             CCCCC--------CHHHHHHHHHHHHHHHHHTTCSS-CCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHH
T ss_pred             cCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCccccc
Confidence            9986543333333358999999999999999987 5 8899999998865423333457888876554433222222237


Q ss_pred             hHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhh
Q 020334          164 YVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLL  243 (327)
Q Consensus       164 Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  243 (327)
                      |+.||.++|.++..++++++++++++||+++|||......+..+..+.....+....++. ++++|+|++|+|++++.++
T Consensus       160 Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~i~v~Dva~a~~~~~  238 (322)
T 2p4h_X          160 YAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGV-TRFHMVHVDDVARAHIYLL  238 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCE-EEEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcC-CCcCEEEHHHHHHHHHHHh
Confidence            999999999999999887899999999999999976543333332222223444333332 3358999999999999999


Q ss_pred             cCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHHHhccccccccHHHHHHHHHHHHHH
Q 020334          244 EYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAIKCCKE  323 (327)
Q Consensus       244 ~~~~~~~~y~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~  323 (327)
                      +++...|.||++++.+|+.|+++.+.+..+..++|......+........+|++|+++|||+|+++++++|+++++|+++
T Consensus       239 ~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~  318 (322)
T 2p4h_X          239 ENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGARLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKE  318 (322)
T ss_dssp             HSCCCCEEEECCCEEEEHHHHHHHHHHHCTTSCCCCTTTTTTCCCEECCEECCHHHHHTTCCCCCCHHHHHHHHHHHHHH
T ss_pred             hCcCCCCCEEEcCCCCCHHHHHHHHHHhCCCCCCCCCccccCCCCCcceecccHHHHHhCCccCCCHHHHHHHHHHHHHh
Confidence            87655677998788899999999999987654444311011121124577899999779999999999999999999999


Q ss_pred             cCCC
Q 020334          324 RGYL  327 (327)
Q Consensus       324 ~~~~  327 (327)
                      ++++
T Consensus       319 ~~~~  322 (322)
T 2p4h_X          319 KGYL  322 (322)
T ss_dssp             HTCC
T ss_pred             cCCC
Confidence            8875

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=1.3e-49  Score=350.25  Aligned_cols=320  Identities=38%  Similarity=0.668  Sum_probs=228.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      |+|+|||||||||||++|+++|+++|++|++++| ++........+.... ...+++++.+|++|++++.++++++|+||
T Consensus         8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vi   85 (338)
T 2rh8_A            8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVR-DPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIAGCDFVF   85 (338)
T ss_dssp             -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEES-CTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHTTCSEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEc-CcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHcCCCEEE
Confidence            4678999999999999999999999999999999 443322111111100 01468899999999999999999999999


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCC--CCcccCCCCCChhHhhhcCCCc
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKD--VDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~--~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      |+|+.......++..+++++|+.++.+++++|++.+.+++|||+||.++++..+..  ..+++|+++...+...+..++.
T Consensus        86 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  165 (338)
T 2rh8_A           86 HVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPT  165 (338)
T ss_dssp             EESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCC
T ss_pred             EeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCcc
Confidence            99997644333343358899999999999999987447899999998744322111  1378888764433222222223


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc-------ccCCCeeeHHH
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI-------LLNISMVHIDD  234 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~v~D  234 (327)
                      ++|+.+|..+|.+++.+++++|++++++||+++|||+.....+..+..+.....+....+..       .+.++|+|++|
T Consensus       166 ~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~D  245 (338)
T 2rh8_A          166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVED  245 (338)
T ss_dssp             CCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHH
Confidence            36999999999999998877899999999999999986544333333222223333222211       12248999999


Q ss_pred             HHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHHHhccccccccHHHHH
Q 020334          235 VARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKYGIDEMF  314 (327)
Q Consensus       235 ~a~~~~~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l  314 (327)
                      +|++++.+++++..++.||++++.+|+.|+++.+.+..+...+|.  ...+........+|++|+++|||+|+++++|+|
T Consensus       246 va~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~~gl  323 (338)
T 2rh8_A          246 VCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPT--DFGDFPPKSKLIISSEKLVKEGFSFKYGIEEIY  323 (338)
T ss_dssp             HHHHHHHHHHCTTCCEEEEECSEEECHHHHHHHHHHHCTTSCCCC--CCTTSCSSCSCCCCCHHHHHHTCCCSCCHHHHH
T ss_pred             HHHHHHHHHcCCCcCCcEEEecCCCCHHHHHHHHHHhCCCCCCCC--CCCCCCcCcceeechHHHHHhCCCCCCCHHHHH
Confidence            999999999887667789987778999999999999887444443  111121122377899999779999999999999


Q ss_pred             HHHHHHHHHcCCC
Q 020334          315 DGAIKCCKERGYL  327 (327)
Q Consensus       315 ~~~~~~~~~~~~~  327 (327)
                      +++++|+++.+++
T Consensus       324 ~~~~~~~~~~~~~  336 (338)
T 2rh8_A          324 DESVEYFKAKGLL  336 (338)
T ss_dssp             HHHHHHHHHTTCC
T ss_pred             HHHHHHHHHcCCC
Confidence            9999999998864

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=3.6e-48  Score=337.17  Aligned_cols=292  Identities=18%  Similarity=0.176  Sum_probs=233.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      |+|+|||||||||||++|+++|+++|++|++++|+ +.... +          .+++++.+|++ ++++.++++++|+||
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~-~----------~~~~~~~~Dl~-~~~~~~~~~~~d~Vi   67 (311)
T 3m2p_A            1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRS-IGNKA-I----------NDYEYRVSDYT-LEDLINQLNDVDAVV   67 (311)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-CC----------------CCEEEECCCC-HHHHHHHTTTCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC-CCccc-C----------CceEEEEcccc-HHHHHHhhcCCCEEE
Confidence            46899999999999999999999999999999994 33222 1          27899999999 999999999999999


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchh
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS  163 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  163 (327)
                      |||+.....  ++. +.++.|+.++.++++++++.+ +++|||+||..+|+  .....+++|+++         ..|.++
T Consensus        68 h~a~~~~~~--~~~-~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vyg--~~~~~~~~E~~~---------~~p~~~  132 (311)
T 3m2p_A           68 HLAATRGSQ--GKI-SEFHDNEILTQNLYDACYENN-ISNIVYASTISAYS--DETSLPWNEKEL---------PLPDLM  132 (311)
T ss_dssp             ECCCCCCSS--SCG-GGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCC--CGGGCSBCTTSC---------CCCSSH
T ss_pred             EccccCCCC--ChH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhC--CCCCCCCCCCCC---------CCCCch
Confidence            999976644  444 788999999999999999988 89999999999996  445578888886         366789


Q ss_pred             hHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHH-hCCccccc-cccC-CCeeeHHHHHHHHH
Q 020334          164 YVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-LGNREEYS-ILLN-ISMVHIDDVARAHI  240 (327)
Q Consensus       164 Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~-~~~i~v~D~a~~~~  240 (327)
                      |+.+|..+|++++.++++.+++++++||+.+|||+....  ..+..+.... .+....+. .+.. ++|+|++|+|++++
T Consensus       133 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~  210 (311)
T 3m2p_A          133 YGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN--YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVI  210 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C--CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC--CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHH
Confidence            999999999999999988899999999999999986542  4454454443 34444442 2333 79999999999999


Q ss_pred             HhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHH-HhccccccccHHHHHHHHH
Q 020334          241 FLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL-LDICFTYKYGIDEMFDGAI  318 (327)
Q Consensus       241 ~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p~~~~~~~l~~~~  318 (327)
                      .+++++..+++||+ +++.+|+.|+++.+++.+|........+...........+|++|+ +.|||+|+++++++|++++
T Consensus       211 ~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~  290 (311)
T 3m2p_A          211 YALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIH  290 (311)
T ss_dssp             HHTTCTTCCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSSBCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHH
T ss_pred             HHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCCCCCCcCceecCHHHHHHHhCCCcccCHHHHHHHHH
Confidence            99999877789997 567899999999999998832111100110123456788999999 6699999999999999999


Q ss_pred             HHHHHcC
Q 020334          319 KCCKERG  325 (327)
Q Consensus       319 ~~~~~~~  325 (327)
                      +|+++.+
T Consensus       291 ~~~~~~~  297 (311)
T 3m2p_A          291 LLMRGLD  297 (311)
T ss_dssp             HHHCC--
T ss_pred             HHHHhcc
Confidence            9998765

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=1.2e-48  Score=345.96  Aligned_cols=308  Identities=19%  Similarity=0.157  Sum_probs=239.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCC--CCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGA--SERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      ++|+|||||||||||++|+++|+++|++|++++|+..........+......  ..+++++.+|++|++++.++++++|+
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~  103 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH  103 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence            4689999999999999999999999999999999544333333333211000  04789999999999999999999999


Q ss_pred             EEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           82 VIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        82 vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |||||+....  ...++. ..+++|+.++.+++++|++.+ +++|||+||.++|+  .....+++|+++         ..
T Consensus       104 Vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vyg--~~~~~~~~E~~~---------~~  170 (351)
T 3ruf_A          104 VLHQAALGSVPRSIVDPI-TTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTYG--DHPALPKVEENI---------GN  170 (351)
T ss_dssp             EEECCCCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGT--TCCCSSBCTTCC---------CC
T ss_pred             EEECCccCCcchhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhcC--CCCCCCCccCCC---------CC
Confidence            9999996542  223343 789999999999999999988 89999999999995  445678899886         36


Q ss_pred             CchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC--CCchHHHHHHH-HhCCcccccc-ccC-CCeeeHHH
Q 020334          160 WGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK--FAGSVRSTLAM-VLGNREEYSI-LLN-ISMVHIDD  234 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~~~-~~~~~~~~~~-~~~-~~~i~v~D  234 (327)
                      |.++|+.+|..+|.+++.++++++++++++||+++|||+....  ....+..++.. ..+....+.. +.+ ++|+|++|
T Consensus       171 p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D  250 (351)
T 3ruf_A          171 PLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDN  250 (351)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHH
Confidence            6789999999999999999988899999999999999986543  12344444443 3444444333 233 79999999


Q ss_pred             HHHHHHHhhcC--CCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCC--CCccc--ccccccccChHHH-Hhccccc
Q 020334          235 VARAHIFLLEY--PDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVD--SLSEI--EGYKLSALSSKKL-LDICFTY  306 (327)
Q Consensus       235 ~a~~~~~~~~~--~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~--~~~~~--~~~~~~~~d~~k~-~~lg~~p  306 (327)
                      +|++++.++.+  ...+++||+ +++.+|+.|+++.+++.+|........  .....  .......+|++|+ +.|||+|
T Consensus       251 va~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p  330 (351)
T 3ruf_A          251 VIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDLLKYRP  330 (351)
T ss_dssp             HHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHHHHCCCC
T ss_pred             HHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHHHhCCCC
Confidence            99999999987  345679997 578899999999999988742111100  11111  3345678999999 7799999


Q ss_pred             cccHHHHHHHHHHHHHHc
Q 020334          307 KYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       307 ~~~~~~~l~~~~~~~~~~  324 (327)
                      +++++++|+++++||+++
T Consensus       331 ~~~~~~~l~~~~~~~~~~  348 (351)
T 3ruf_A          331 NIKIREGLRLSMPWYVRF  348 (351)
T ss_dssp             CCCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHh
Confidence            999999999999999864

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=3.4e-48  Score=342.35  Aligned_cols=304  Identities=16%  Similarity=0.143  Sum_probs=233.7

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCC-CCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC-
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDP-EHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG-   78 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-   78 (327)
                      .++|+|||||||||||++|+++|+++|  ++|++++|... .....+..+.    ..++++++.+|++|++.+.+++++ 
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~   97 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQ----DHPNYYFVKGEIQNGELLEHVIKER   97 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTT----TCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhc----cCCCeEEEEcCCCCHHHHHHHHhhc
Confidence            346799999999999999999999999  77888888432 2222222221    125899999999999999999986 


Q ss_pred             -CCEEEEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhh
Q 020334           79 -CAGVIHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIR  155 (327)
Q Consensus        79 -~d~vih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~  155 (327)
                       +|+|||+|+.....  ..++. ..+++|+.++.+++++|++.+ +++|||+||.++|+. .....+++|+++       
T Consensus        98 ~~d~Vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy~~-~~~~~~~~E~~~-------  167 (346)
T 4egb_A           98 DVQVIVNFAAESHVDRSIENPI-PFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVYGS-LGKTGRFTEETP-------  167 (346)
T ss_dssp             TCCEEEECCCCC---------C-HHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGGCC-CCSSCCBCTTSC-------
T ss_pred             CCCEEEECCcccchhhhhhCHH-HHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHhCC-CCcCCCcCCCCC-------
Confidence             99999999976532  23333 889999999999999999998 899999999999973 235678899886       


Q ss_pred             hcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHH-hCCccccc-cccC-CCeeeH
Q 020334          156 KLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-LGNREEYS-ILLN-ISMVHI  232 (327)
Q Consensus       156 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~-~~~i~v  232 (327)
                        ..|.++|+.+|..+|.+++.++++++++++++||+.+|||+...  ...+..++... .+....+. .+.. ++|+|+
T Consensus       168 --~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  243 (346)
T 4egb_A          168 --LAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYP--EKLIPLMVTNALEGKKLPLYGDGLNVRDWLHV  243 (346)
T ss_dssp             --CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT--TSHHHHHHHHHHTTCCCEEETTSCCEECEEEH
T ss_pred             --CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCc--cchHHHHHHHHHcCCCceeeCCCCeEEeeEEH
Confidence              36678999999999999999998889999999999999998653  24444444443 44444433 2333 799999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHH-HhccccccccH
Q 020334          233 DDVARAHIFLLEYPDAKGRYICS-SAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL-LDICFTYKYGI  310 (327)
Q Consensus       233 ~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p~~~~  310 (327)
                      +|+|++++.+++++..+++||++ ++.+|+.|+++.+++.+|..................+.+|++|+ +.|||+|++++
T Consensus       244 ~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~  323 (346)
T 4egb_A          244 TDHCSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWEPKYTF  323 (346)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC--CCCSCCCBCCHHHHHHHCCCCCCCH
T ss_pred             HHHHHHHHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCCCCCcceeeccHHHHHHHcCCCCCCCH
Confidence            99999999999988777799975 56799999999999998832110100111112345677999999 78999999999


Q ss_pred             HHHHHHHHHHHHHc
Q 020334          311 DEMFDGAIKCCKER  324 (327)
Q Consensus       311 ~~~l~~~~~~~~~~  324 (327)
                      +++|+++++||+++
T Consensus       324 ~e~l~~~~~~~~~~  337 (346)
T 4egb_A          324 EQGLQETVQWYEKN  337 (346)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999999875

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2.8e-47  Score=335.76  Aligned_cols=306  Identities=18%  Similarity=0.200  Sum_probs=235.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~   81 (327)
                      ++|+|||||||||||++++++|+++|++|++++|+..........+....  ..++.++.+|++|++++.++++  ++|+
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT--GKTPAFHETDVSDERALARIFDAHPITA   81 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH--SCCCEEECCCTTCHHHHHHHHHHSCCCE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc--CCCceEEEeecCCHHHHHHHHhccCCcE
Confidence            56799999999999999999999999999999994433322222221110  1478999999999999999998  8999


Q ss_pred             EEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           82 VIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        82 vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |||+|+....  ....+. +.++.|+.++.++++++++.+ +++|||+||.++|+  .....+++|+++         ..
T Consensus        82 vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g--~~~~~~~~e~~~---------~~  148 (341)
T 3enk_A           82 AIHFAALKAVGESVAKPI-EYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVYG--VPERSPIDETFP---------LS  148 (341)
T ss_dssp             EEECCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGBC--SCSSSSBCTTSC---------CB
T ss_pred             EEECccccccCccccChH-HHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEec--CCCCCCCCCCCC---------CC
Confidence            9999997542  122333 788999999999999999987 88999999999995  455677888876         35


Q ss_pred             CchhhHhhhHHHHHHHHHHHHHcC-CcEEEEecCceecCCCCCC--------CCchHHHHHHHHhCCccccc--------
Q 020334          160 WGKSYVLTKTLTERAALEFAEEHG-LDLVTLIPSFVVGPFICPK--------FAGSVRSTLAMVLGNREEYS--------  222 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~~~~-~~~~i~R~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~--------  222 (327)
                      |.++|+.+|..+|.+++.++++++ ++++++||+++|||+....        ....+..+.....+....+.        
T Consensus       149 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  228 (341)
T 3enk_A          149 ATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPT  228 (341)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSS
T ss_pred             CCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCC
Confidence            678999999999999999998875 9999999999999965221        12334444444444332222        


Q ss_pred             -cccC-CCeeeHHHHHHHHHHhhcC---CCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccCh
Q 020334          223 -ILLN-ISMVHIDDVARAHIFLLEY---PDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSS  296 (327)
Q Consensus       223 -~~~~-~~~i~v~D~a~~~~~~~~~---~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~  296 (327)
                       .+.+ ++|+|++|+|++++.++++   ...+++||+ +++.+|+.|+++.+++.+|. +.+...............+|+
T Consensus       229 ~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~  307 (341)
T 3enk_A          229 PDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGR-AVPYELVARRPGDVAECYANP  307 (341)
T ss_dssp             TTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCS-CCCEEEECCCTTCCSEECBCC
T ss_pred             CCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCC-CcceeeCCCCCCCccccccCH
Confidence             2223 7999999999999999986   345779997 57789999999999998883 222110111123345678899


Q ss_pred             HHH-HhccccccccHHHHHHHHHHHHHHcC
Q 020334          297 KKL-LDICFTYKYGIDEMFDGAIKCCKERG  325 (327)
Q Consensus       297 ~k~-~~lg~~p~~~~~~~l~~~~~~~~~~~  325 (327)
                      +|+ +.|||+|+++++++|+++++||+++.
T Consensus       308 ~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~  337 (341)
T 3enk_A          308 AAAAETIGWKAERDLERMCADHWRWQENNP  337 (341)
T ss_dssp             HHHHHHHCCCCCCCHHHHHHHHHHHHHHST
T ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcC
Confidence            999 78999999999999999999999864

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=3.7e-47  Score=331.10  Aligned_cols=293  Identities=19%  Similarity=0.199  Sum_probs=225.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      ||+|||||||||||++|+++|+++| .++++++.+.......         ..+++++.+|+.| +++.++++++|+|||
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~---------~~~~~~~~~Dl~~-~~~~~~~~~~d~vih   69 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV---------NEAARLVKADLAA-DDIKDYLKGAEEVWH   69 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS---------CTTEEEECCCTTT-SCCHHHHTTCSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc---------CCCcEEEECcCCh-HHHHHHhcCCCEEEE
Confidence            4689999999999999999999999 5555555343332221         2578999999999 889999999999999


Q ss_pred             ccCCCC--CCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           85 VAAPID--IDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        85 ~a~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      +|+...  ....++. ..+++|+.++.++++++++.+ +++|||+||..+|+  .....+++|+++         ..|.+
T Consensus        70 ~a~~~~~~~~~~~~~-~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vyg--~~~~~~~~E~~~---------~~~~~  136 (313)
T 3ehe_A           70 IAANPDVRIGAENPD-EIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYG--EAKVIPTPEDYP---------THPIS  136 (313)
T ss_dssp             CCCCCCCC-CCCCHH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGGC--SCSSSSBCTTSC---------CCCCS
T ss_pred             CCCCCChhhhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHhC--cCCCCCCCCCCC---------CCCCC
Confidence            998643  3344555 899999999999999999988 88999999999996  445677888875         35678


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHH-HhCCc-c-ccccccC-CCeeeHHHHHHH
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAM-VLGNR-E-EYSILLN-ISMVHIDDVARA  238 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~-~-~~~~~~~-~~~i~v~D~a~~  238 (327)
                      +|+.+|..+|.+++.++++++++++++||+++|||+...   ..+..++.. ..+.. . .++.+.+ ++|+|++|+|++
T Consensus       137 ~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a  213 (313)
T 3ehe_A          137 LYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTH---GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDA  213 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC---SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc---ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHH
Confidence            899999999999999999899999999999999997653   334444433 33322 2 2233333 799999999999


Q ss_pred             HHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCC-CCCCCCCc-ccccccccccChHHHHhccccccccHHHHHH
Q 020334          239 HIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYP-IPNVDSLS-EIEGYKLSALSSKKLLDICFTYKYGIDEMFD  315 (327)
Q Consensus       239 ~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~-~~~~~~~~-~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~  315 (327)
                      ++.+++....+++||+ +++.+|+.|+++.+++.+|... +....... .........+|++|+++|||+|+++++++|+
T Consensus       214 ~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~  293 (313)
T 3ehe_A          214 MLFGLRGDERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKLKRLGWKPRYNSEEAVR  293 (313)
T ss_dssp             HHHHTTCCSSEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC------------CCBCCHHHHHHTCCCSCCHHHHHH
T ss_pred             HHHHhccCCCCceEEECCCCCeeHHHHHHHHHHHhCCCCceEECCCccCCccccceeccCHHHHHHcCCCCCCCHHHHHH
Confidence            9999996666779996 5678999999999999988321 11100000 1123345779999998899999999999999


Q ss_pred             HHHHHHHHc
Q 020334          316 GAIKCCKER  324 (327)
Q Consensus       316 ~~~~~~~~~  324 (327)
                      ++++||+++
T Consensus       294 ~~~~~~~~~  302 (313)
T 3ehe_A          294 MAVRDLVED  302 (313)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhC
Confidence            999999874

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=7.7e-47  Score=328.93  Aligned_cols=294  Identities=20%  Similarity=0.186  Sum_probs=228.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      |+|||||||||||++++++|+++|++|++++|+........         ..+++++.+|+.|.+ +.+++++ |+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~   69 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV---------NPSAELHVRDLKDYS-WGAGIKG-DVVFHF   69 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS---------CTTSEEECCCTTSTT-TTTTCCC-SEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc---------CCCceEEECccccHH-HHhhcCC-CEEEEC
Confidence            57999999999999999999999999999999433222111         257899999999998 8888877 999999


Q ss_pred             cCCCC--CCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchh
Q 020334           86 AAPID--IDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS  163 (327)
Q Consensus        86 a~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  163 (327)
                      |+...  ....++. ..+++|+.++.++++++++.+ +++|||+||.++|+  .....+++|+++         ..|.++
T Consensus        70 A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vyg--~~~~~~~~e~~~---------~~p~~~  136 (312)
T 3ko8_A           70 AANPEVRLSTTEPI-VHFNENVVATFNVLEWARQTG-VRTVVFASSSTVYG--DADVIPTPEEEP---------YKPISV  136 (312)
T ss_dssp             CSSCSSSGGGSCHH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGC--SCSSSSBCTTSC---------CCCCSH
T ss_pred             CCCCCchhhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHhC--CCCCCCCCCCCC---------CCCCCh
Confidence            99643  2334444 889999999999999999988 88999999999996  445677888875         356789


Q ss_pred             hHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHH-hCCc-c-ccccccC-CCeeeHHHHHHHH
Q 020334          164 YVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-LGNR-E-EYSILLN-ISMVHIDDVARAH  239 (327)
Q Consensus       164 Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-~~~~-~-~~~~~~~-~~~i~v~D~a~~~  239 (327)
                      |+.+|..+|.+++.++++++++++++||+++|||+...   ..+..++... .+.. . .+..+.+ ++|+|++|+|+++
T Consensus       137 Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  213 (312)
T 3ko8_A          137 YGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRH---GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEAT  213 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCS---SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCC---ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHH
Confidence            99999999999999998889999999999999997653   3343344333 3322 2 2223333 7999999999999


Q ss_pred             HHhhcC----CCCCceEEE-eccccCHHHHHHHHHHhCCCCC-C---CCCCCCc-ccccccccccChHHH-Hhccccccc
Q 020334          240 IFLLEY----PDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYP-I---PNVDSLS-EIEGYKLSALSSKKL-LDICFTYKY  308 (327)
Q Consensus       240 ~~~~~~----~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~-~---~~~~~~~-~~~~~~~~~~d~~k~-~~lg~~p~~  308 (327)
                      +.++++    ...+++||+ +++.+|+.|+++.+.+.++... +   +...... .........+|++|+ +.|||+|++
T Consensus       214 ~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~  293 (312)
T 3ko8_A          214 LAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTM  293 (312)
T ss_dssp             HHHHHHHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CCCSEECBCCHHHHHHHCCCCSS
T ss_pred             HHHHHhccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCCccccccCHHHHHHHhCCCCCC
Confidence            999987    344568997 4678999999999999887211 1   1100000 112345678999999 899999999


Q ss_pred             cHHHHHHHHHHHHHHcCC
Q 020334          309 GIDEMFDGAIKCCKERGY  326 (327)
Q Consensus       309 ~~~~~l~~~~~~~~~~~~  326 (327)
                      +++++|+++++|+++++|
T Consensus       294 ~~~~~l~~~~~~~~~~~~  311 (312)
T 3ko8_A          294 TSAEAVKKTAEDLAKELW  311 (312)
T ss_dssp             CHHHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHhhhc
Confidence            999999999999999875

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=2.1e-46  Score=332.86  Aligned_cols=299  Identities=17%  Similarity=0.141  Sum_probs=229.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHH--CCCeEEEEEcCCCCC------cchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLD--HGYFVTTTVRSDPEH------KKDLSFLTNLPGASERLQIFNADLNDPESFDAA   75 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~   75 (327)
                      ++|+|||||||||||++++++|++  .|++|++++|+....      ...+......  ...++.++.+|++|++++.++
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~   86 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL--IGFKGEVIAADINNPLDLRRL   86 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGG--TTCCSEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhc--cccCceEEECCCCCHHHHHHh
Confidence            457999999999999999999999  999999999943310      1111111111  124679999999999999998


Q ss_pred             -hcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHh
Q 020334           76 -IAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYI  154 (327)
Q Consensus        76 -~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~  154 (327)
                       ..++|+||||||.......++. ..+++|+.++.++++++++.+ ++ |||+||+++|+.  ... +++|+++      
T Consensus        87 ~~~~~D~vih~A~~~~~~~~~~~-~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vyg~--~~~-~~~E~~~------  154 (362)
T 3sxp_A           87 EKLHFDYLFHQAAVSDTTMLNQE-LVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVYGN--TKA-PNVVGKN------  154 (362)
T ss_dssp             TTSCCSEEEECCCCCGGGCCCHH-HHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGGCS--CCS-SBCTTSC------
T ss_pred             hccCCCEEEECCccCCccccCHH-HHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHhCC--CCC-CCCCCCC------
Confidence             7799999999997665445555 899999999999999999887 65 999999999963  223 8888875      


Q ss_pred             hhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC--CchHHHHHHHH-hCCcccc-ccccC-CCe
Q 020334          155 RKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKF--AGSVRSTLAMV-LGNREEY-SILLN-ISM  229 (327)
Q Consensus       155 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~--~~~~~~~~~~~-~~~~~~~-~~~~~-~~~  229 (327)
                         ..|.++|+.+|..+|.+++.++++  ++++++||+++|||+.....  ...+..+.... .+..... ..+.+ ++|
T Consensus       155 ---~~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  229 (362)
T 3sxp_A          155 ---ESPENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDF  229 (362)
T ss_dssp             ---CCCSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEEC
T ss_pred             ---CCCCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEcc
Confidence               366789999999999999998765  99999999999999865421  14444444443 3444333 33333 799


Q ss_pred             eeHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcc-cccccccccChHHH-Hhccccc
Q 020334          230 VHIDDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSE-IEGYKLSALSSKKL-LDICFTY  306 (327)
Q Consensus       230 i~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~k~-~~lg~~p  306 (327)
                      +|++|+|++++.+++.+.. |+||+ +++.+|+.|+++.+++.+|...+..  .... ........+|++|+ +.|||+|
T Consensus       230 i~v~Dva~ai~~~~~~~~~-g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~d~~k~~~~lG~~p  306 (362)
T 3sxp_A          230 VYIEDVIQANVKAMKAQKS-GVYNVGYSQARSYNEIVSILKEHLGDFKVTY--IKNPYAFFQKHTQAHIEPTILDLDYTP  306 (362)
T ss_dssp             EEHHHHHHHHHHHTTCSSC-EEEEESCSCEEEHHHHHHHHHHHHCCCEEEC--CC-------CCCCBCCHHHHHHHCCCC
T ss_pred             EEHHHHHHHHHHHHhcCCC-CEEEeCCCCCccHHHHHHHHHHHcCCCceEE--CCCCCcCcccceecCHHHHHHHhCCCC
Confidence            9999999999999998765 49997 5778999999999999988222111  1111 23345678999999 8999999


Q ss_pred             cccHHHHHHHHHHHHHHc
Q 020334          307 KYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       307 ~~~~~~~l~~~~~~~~~~  324 (327)
                      +++++++|+++++|+++.
T Consensus       307 ~~~l~e~l~~~~~~~~~~  324 (362)
T 3sxp_A          307 LYDLESGIKDYLPHIHAI  324 (362)
T ss_dssp             CCCHHHHHHHHHHHHTCC
T ss_pred             CCCHHHHHHHHHHHHHHH
Confidence            999999999999999753

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=5.6e-47  Score=329.79  Aligned_cols=296  Identities=15%  Similarity=0.128  Sum_probs=227.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHC--CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDH--GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GC   79 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~   79 (327)
                      |+|+|||||||||||++++++|+++  |++|++++|+ +.... +   .      .+++++.+|++|++++.++++  ++
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~-~~~~~-~---~------~~~~~~~~D~~d~~~~~~~~~~~~~   69 (312)
T 2yy7_A            1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIR-KLNTD-V---V------NSGPFEVVNALDFNQIEHLVEVHKI   69 (312)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESC-CCSCH-H---H------HSSCEEECCTTCHHHHHHHHHHTTC
T ss_pred             CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCC-Ccccc-c---c------CCCceEEecCCCHHHHHHHHhhcCC
Confidence            3578999999999999999999998  8999999994 33221 1   1      256889999999999999998  89


Q ss_pred             CEEEEccCCCCCC-CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcC
Q 020334           80 AGVIHVAAPIDID-GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLD  158 (327)
Q Consensus        80 d~vih~a~~~~~~-~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (327)
                      |+|||+|+..... ..++ .+.+++|+.++.++++++++.+ +++|||+||.++|+. .....+.+|+++         .
T Consensus        70 d~vih~a~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~-~~~~~~~~e~~~---------~  137 (312)
T 2yy7_A           70 TDIYLMAALLSATAEKNP-AFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGP-TTPKENTPQYTI---------M  137 (312)
T ss_dssp             CEEEECCCCCHHHHHHCH-HHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCT-TSCSSSBCSSCB---------C
T ss_pred             CEEEECCccCCCchhhCh-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCC-CCCCCCccccCc---------C
Confidence            9999999865421 1233 3789999999999999999987 889999999999963 223356777764         3


Q ss_pred             CCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--c-hHHHHHHHHhCCccc-ccccc-CCCeeeHH
Q 020334          159 IWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA--G-SVRSTLAMVLGNREE-YSILL-NISMVHID  233 (327)
Q Consensus       159 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~--~-~~~~~~~~~~~~~~~-~~~~~-~~~~i~v~  233 (327)
                      .|.++|+.+|..+|.+++.++++++++++++||+.+|||...+...  . ....+......+... +..+. .++|+|++
T Consensus       138 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  217 (312)
T 2yy7_A          138 EPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMD  217 (312)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHH
Confidence            5678899999999999999988889999999999999987543211  1 233333444444433 22222 37999999


Q ss_pred             HHHHHHHHhhcCCCC----CceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCcc-cccccccccChHHH-Hhcccccc
Q 020334          234 DVARAHIFLLEYPDA----KGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSE-IEGYKLSALSSKKL-LDICFTYK  307 (327)
Q Consensus       234 D~a~~~~~~~~~~~~----~~~y~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~k~-~~lg~~p~  307 (327)
                      |+|++++.+++++..    +++||++++.+|+.|+++.+.+.+|...++....... ........+|++|+ +.|||+|+
T Consensus       218 Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~  297 (312)
T 2yy7_A          218 DAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTITYEPDFRQKIADSWPASIDDSQAREDWDWKHT  297 (312)
T ss_dssp             HHHHHHHHHHHSCGGGCCCSSCEECCSEEECHHHHHHHHHTTCTTCEEEECCCTHHHHHTTSCSSBCCHHHHHHHCCCCC
T ss_pred             HHHHHHHHHHhCcccccccCceEEeCCCccCHHHHHHHHHHHCCCCceEeccCccccccccccccCCHHHHHHHcCCCCC
Confidence            999999999987653    3799987788999999999999988433322111111 11223457899999 77999999


Q ss_pred             ccHHHHHHHHHHHHH
Q 020334          308 YGIDEMFDGAIKCCK  322 (327)
Q Consensus       308 ~~~~~~l~~~~~~~~  322 (327)
                      ++++++|+++++|||
T Consensus       298 ~~l~~~l~~~~~~~k  312 (312)
T 2yy7_A          298 FDLESMTKDMIEHLS  312 (312)
T ss_dssp             CCHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHhC
Confidence            999999999999985

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=2.1e-46  Score=330.92  Aligned_cols=291  Identities=21%  Similarity=0.232  Sum_probs=232.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+|+|||||||||||++|+++|+++|++|++++| .+..              .+++++.+|+.|++.+.++++++|+||
T Consensus        18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r-~~~~--------------~~~~~~~~Dl~d~~~~~~~~~~~d~vi   82 (347)
T 4id9_A           18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDL-RPSG--------------TGGEEVVGSLEDGQALSDAIMGVSAVL   82 (347)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEES-SCCS--------------SCCSEEESCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeC-CCCC--------------CCccEEecCcCCHHHHHHHHhCCCEEE
Confidence            3678999999999999999999999999999999 3322              267899999999999999999999999


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchh
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS  163 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  163 (327)
                      |+|+........+. ..+++|+.++.+++++|++.+ +++|||+||.++|+.......+++|+++         ..|.++
T Consensus        83 h~A~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~---------~~~~~~  151 (347)
T 4id9_A           83 HLGAFMSWAPADRD-RMFAVNVEGTRRLLDAASAAG-VRRFVFASSGEVYPENRPEFLPVTEDHP---------LCPNSP  151 (347)
T ss_dssp             ECCCCCCSSGGGHH-HHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGTTTTSCSSSSBCTTSC---------CCCCSH
T ss_pred             ECCcccCcchhhHH-HHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHHhCCCCCCCCCcCCCCC---------CCCCCh
Confidence            99998776555554 899999999999999999988 8999999999999743356678899886         356789


Q ss_pred             hHhhhHHHHHHHHHHHHHcCCcEEEEecCcee-------------cCCCCCC---------CCchHHHHHHHHh-CCccc
Q 020334          164 YVLTKTLTERAALEFAEEHGLDLVTLIPSFVV-------------GPFICPK---------FAGSVRSTLAMVL-GNREE  220 (327)
Q Consensus       164 Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~-------------G~~~~~~---------~~~~~~~~~~~~~-~~~~~  220 (327)
                      |+.+|..+|.+++.++++.+++++++||+.+|             ||+....         ....+..++.... +.+..
T Consensus       152 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (347)
T 4id9_A          152 YGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSH  231 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCE
T ss_pred             HHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeE
Confidence            99999999999999999889999999999999             7753321         1233444444433 33323


Q ss_pred             cc-cccC-CCe----eeHHHHHHHHHHhhcCC-CCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCccccccccc
Q 020334          221 YS-ILLN-ISM----VHIDDVARAHIFLLEYP-DAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLS  292 (327)
Q Consensus       221 ~~-~~~~-~~~----i~v~D~a~~~~~~~~~~-~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  292 (327)
                      +. .+.. ++|    +|++|+|++++.+++++ ..+++||+ +++.+|+.|+++.+++.+|. +.+.. ..+  ......
T Consensus       232 ~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~-~~p--~~~~~~  307 (347)
T 4id9_A          232 ILARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGL-PIVTV-DFP--GDGVYY  307 (347)
T ss_dssp             EEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCC-CEEEE-ECS--SCCCBC
T ss_pred             EeCCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCC-CCcee-eCC--Cccccc
Confidence            32 2222 788    99999999999999987 45779997 56789999999999999873 11110 000  112267


Q ss_pred             ccChHHH-HhccccccccHHHHHHHHHHHHHHc
Q 020334          293 ALSSKKL-LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       293 ~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      .+|++|+ +.|||+|+++++++|+++++|++++
T Consensus       308 ~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  340 (347)
T 4id9_A          308 HTSNERIRNTLGFEAEWTMDRMLEEAATARRQR  340 (347)
T ss_dssp             CBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             ccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence            7999999 7799999999999999999999864

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=1.1e-45  Score=324.11  Aligned_cols=297  Identities=19%  Similarity=0.239  Sum_probs=229.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v   82 (327)
                      ||+|||||||||||++++++|+++|++|++++|+.......   +      ..+++++.+|+.|++++.++++  ++|+|
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~------~~~~~~~~~D~~~~~~~~~~~~~~~~d~v   71 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDA---I------TEGAKFYNGDLRDKAFLRDVFTQENIEAV   71 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---S------CTTSEEEECCTTCHHHHHHHHHHSCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhh---c------CCCcEEEECCCCCHHHHHHHHhhcCCCEE
Confidence            46899999999999999999999999999999943222211   1      1368999999999999999998  89999


Q ss_pred             EEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           83 IHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        83 ih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      ||+|+.....  ..++. ..+++|+.++.+++++|++.+ +++|||+||.++|+  .....+++|+++         ..|
T Consensus        72 ih~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~--~~~~~~~~E~~~---------~~~  138 (330)
T 2c20_A           72 MHFAADSLVGVSMEKPL-QYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATYG--EVDVDLITEETM---------TNP  138 (330)
T ss_dssp             EECCCCCCHHHHHHSHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGGC--SCSSSSBCTTSC---------CCC
T ss_pred             EECCcccCccccccCHH-HHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceeeC--CCCCCCCCcCCC---------CCC
Confidence            9999975421  12333 789999999999999999887 89999999999985  344568889876         255


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC-------CCchHHHHHHHHhCCc--cccc-------cc
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK-------FAGSVRSTLAMVLGNR--EEYS-------IL  224 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~--~~~~-------~~  224 (327)
                      .++|+.+|..+|.+++.++++++++++++||+++|||+....       ....+..+.....+..  ..+.       .+
T Consensus       139 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  218 (330)
T 2c20_A          139 TNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDG  218 (330)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSS
T ss_pred             CChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCC
Confidence            788999999999999999988899999999999999974221       1234444444444332  2111       22


Q ss_pred             cC-CCeeeHHHHHHHHHHhhcCCC---CCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHH
Q 020334          225 LN-ISMVHIDDVARAHIFLLEYPD---AKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL  299 (327)
Q Consensus       225 ~~-~~~i~v~D~a~~~~~~~~~~~---~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  299 (327)
                      .. ++|+|++|+|++++.+++++.   .+++||+ +++.+|+.|+++.+++.+|. +.+...............+|++|+
T Consensus       219 ~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~  297 (330)
T 2c20_A          219 TCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNH-EIPAEVAPRRAGDPARLVASSQKA  297 (330)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTS-CCCEEEECCCSSCCSEECBCCHHH
T ss_pred             ceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCC-CCceeeCCCCCCcccccccCHHHH
Confidence            22 799999999999999987642   3579996 56789999999999999883 222100011112344678999999


Q ss_pred             -Hhccccccc-cHHHHHHHHHHHHHHc
Q 020334          300 -LDICFTYKY-GIDEMFDGAIKCCKER  324 (327)
Q Consensus       300 -~~lg~~p~~-~~~~~l~~~~~~~~~~  324 (327)
                       +.|||+|++ +++++|+++++|++++
T Consensus       298 ~~~lG~~p~~~~l~~~l~~~~~~~~~~  324 (330)
T 2c20_A          298 KEKLGWDPRYVNVKTIIEHAWNWHQKQ  324 (330)
T ss_dssp             HHHHCCCCSCCCHHHHHHHHHHHHHHC
T ss_pred             HHHhCCCCccCCHHHHHHHHHHHHHHh
Confidence             789999999 9999999999999875

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=6.9e-46  Score=328.27  Aligned_cols=306  Identities=17%  Similarity=0.130  Sum_probs=232.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCC--CCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGA--SERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      +|+|||||||||||++++++|+++|++|++++|+.......+..+......  ..+++++.+|++|++++.++++++|+|
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v  106 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYV  106 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCEE
Confidence            678999999999999999999999999999999433222222222110000  147899999999999999999999999


Q ss_pred             EEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           83 IHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        83 ih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      ||||+....  ...++. ..+++|+.++.++++++++.+ +++|||+||.++|+  .....+++|+++         ..|
T Consensus       107 ih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~--~~~~~~~~E~~~---------~~~  173 (352)
T 1sb8_A          107 LHQAALGSVPRSINDPI-TSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYG--DHPGLPKVEDTI---------GKP  173 (352)
T ss_dssp             EECCSCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGT--TCCCSSBCTTCC---------CCC
T ss_pred             EECCcccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcC--CCCCCCCCCCCC---------CCC
Confidence            999997542  112344 789999999999999999987 89999999999985  334567888876         356


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC--CCchHHHHHHH-HhCCcccccc-ccC-CCeeeHHHH
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK--FAGSVRSTLAM-VLGNREEYSI-LLN-ISMVHIDDV  235 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~~~-~~~~~~~~~~-~~~-~~~i~v~D~  235 (327)
                      .++|+.+|..+|.+++.++++++++++++||+.+|||+....  ....+..+... ..+.+..+.. +.+ ++|+|++|+
T Consensus       174 ~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dv  253 (352)
T 1sb8_A          174 LSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENT  253 (352)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHH
Confidence            788999999999999999888899999999999999986542  12334444333 3444433322 223 799999999


Q ss_pred             HHHHHHhhcCC--CCCceEEE-eccccCHHHHHHHHHHhC---CCCCCCCCCCCcc--cccccccccChHHH-Hhccccc
Q 020334          236 ARAHIFLLEYP--DAKGRYIC-SSAKLTIQEMAEFLSAKH---PEYPIPNVDSLSE--IEGYKLSALSSKKL-LDICFTY  306 (327)
Q Consensus       236 a~~~~~~~~~~--~~~~~y~~-~~~~~s~~e~~~~i~~~~---~~~~~~~~~~~~~--~~~~~~~~~d~~k~-~~lg~~p  306 (327)
                      |++++.++...  ..+++||+ +++.+|+.|+++.+++.+   |. +.+.......  ........+|++|+ +.|||+|
T Consensus       254 a~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p  332 (352)
T 1sb8_A          254 VQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGV-SYHREPVYRDFREGDVRHSLADISKAAKLLGYAP  332 (352)
T ss_dssp             HHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTC-CCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCC
T ss_pred             HHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCC-CCCCCceecCCCccchhhccCCHHHHHHHhCCCC
Confidence            99999998762  35679997 567899999999999988   62 1111001111  12334567899999 7899999


Q ss_pred             cccHHHHHHHHHHHHHHc
Q 020334          307 KYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       307 ~~~~~~~l~~~~~~~~~~  324 (327)
                      +++++|+|+++++|++++
T Consensus       333 ~~~~~e~l~~~~~~~~~~  350 (352)
T 1sb8_A          333 KYDVSAGVALAMPWYIMF  350 (352)
T ss_dssp             CCCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHh
Confidence            989999999999999864

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=7.7e-45  Score=324.54  Aligned_cols=302  Identities=18%  Similarity=0.135  Sum_probs=230.6

Q ss_pred             CCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            2 EEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      ..+||+|||||||||||++++++|+++|++|++++|+.. ......        ..+++++.+|++|++++.++++++|+
T Consensus        26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~--------~~~v~~~~~Dl~d~~~~~~~~~~~d~   96 (379)
T 2c5a_A           26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKN-EHMTED--------MFCDEFHLVDLRVMENCLKVTEGVDH   96 (379)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC-SSSCGG--------GTCSEEEECCTTSHHHHHHHHTTCSE
T ss_pred             cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCc-cchhhc--------cCCceEEECCCCCHHHHHHHhCCCCE
Confidence            345789999999999999999999999999999999432 221111        14689999999999999999999999


Q ss_pred             EEEccCCCCCC---CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCC---CCCcccCCCCCChhHhh
Q 020334           82 VIHVAAPIDID---GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGK---DVDMLDETFWSDEDYIR  155 (327)
Q Consensus        82 vih~a~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~---~~~~~~E~~~~~~~~~~  155 (327)
                      |||+|+.....   ..++. +.+++|+.++.++++++++.+ +++|||+||.++|+....   ...+++|+++.      
T Consensus        97 Vih~A~~~~~~~~~~~~~~-~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~------  168 (379)
T 2c5a_A           97 VFNLAADMGGMGFIQSNHS-VIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAW------  168 (379)
T ss_dssp             EEECCCCCCCHHHHTTCHH-HHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS------
T ss_pred             EEECceecCcccccccCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeCCCCCCCccCCCcCcccCC------
Confidence            99999975421   23444 889999999999999999887 889999999999863221   12456776521      


Q ss_pred             hcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--chHHHHHHHH-hCCc-ccc-ccccC-CCe
Q 020334          156 KLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA--GSVRSTLAMV-LGNR-EEY-SILLN-ISM  229 (327)
Q Consensus       156 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~-~~~~-~~~-~~~~~-~~~  229 (327)
                       ...|.++|+.+|..+|.+++.++++++++++++||+.+|||+......  ..+..++... .+.+ ..+ ..+.+ ++|
T Consensus       169 -~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~  247 (379)
T 2c5a_A          169 -PAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSF  247 (379)
T ss_dssp             -SBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECC
T ss_pred             -CCCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEE
Confidence             124567899999999999999988889999999999999997654211  2344444433 4443 332 22223 799


Q ss_pred             eeHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHH-Hhcccccc
Q 020334          230 VHIDDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL-LDICFTYK  307 (327)
Q Consensus       230 i~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p~  307 (327)
                      +|++|+|++++.+++++ .+++||+ +++.+|+.|+++.+.+.+|.. .+.. ..+.........+|++|+ +.|||+|+
T Consensus       248 i~v~Dva~ai~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~-~~p~~~~~~~~~~d~~k~~~~lG~~p~  324 (379)
T 2c5a_A          248 TFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKK-LPIH-HIPGPEGVRGRNSDNNLIKEKLGWAPN  324 (379)
T ss_dssp             EEHHHHHHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCC-CCEE-EECCCCCCSBCEECCHHHHHHHSCCCC
T ss_pred             EEHHHHHHHHHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHhCCC-Ccee-eCCCCCCcccccCCHHHHHHHhCCCCC
Confidence            99999999999999876 5679986 567899999999999988831 1110 001111234467899999 78999999


Q ss_pred             ccHHHHHHHHHHHHHHc
Q 020334          308 YGIDEMFDGAIKCCKER  324 (327)
Q Consensus       308 ~~~~~~l~~~~~~~~~~  324 (327)
                      ++++++|+++++|++++
T Consensus       325 ~~l~e~l~~~~~~~~~~  341 (379)
T 2c5a_A          325 MRLKEGLRITYFWIKEQ  341 (379)
T ss_dssp             CCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHh
Confidence            99999999999999864

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=2.6e-45  Score=320.54  Aligned_cols=296  Identities=16%  Similarity=0.113  Sum_probs=227.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC--CCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG--CAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~   81 (327)
                      .+++|||||||||||++++++|+++|++|++++|+ +.. ..   +        +++++.+|++|++++.+++++  +|+
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~-~~~-~~---l--------~~~~~~~Dl~d~~~~~~~~~~~~~d~   77 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRN-NEA-KL---P--------NVEMISLDIMDSQRVKKVISDIKPDY   77 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-TTC-CC---T--------TEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecC-Ccc-cc---c--------eeeEEECCCCCHHHHHHHHHhcCCCE
Confidence            36789999999999999999999999999999994 322 11   1        578999999999999998875  999


Q ss_pred             EEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           82 VIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        82 vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |||||+....  ...++. ..+++|+.++.++++++++.+.+++|||+||.++|+.......+++|+++         ..
T Consensus        78 vih~A~~~~~~~~~~~~~-~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~---------~~  147 (321)
T 2pk3_A           78 IFHLAAKSSVKDSWLNKK-GTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQ---------LR  147 (321)
T ss_dssp             EEECCSCCCHHHHTTCHH-HHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSC---------CB
T ss_pred             EEEcCcccchhhhhhcHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCC---------CC
Confidence            9999997542  223444 88999999999999999876337899999999999632114567888875         35


Q ss_pred             CchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHH-h---C--Cccc-cccccC-CCeee
Q 020334          160 WGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-L---G--NREE-YSILLN-ISMVH  231 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-~---~--~~~~-~~~~~~-~~~i~  231 (327)
                      |.++|+.+|..+|.+++.++++++++++++||+++|||+...  ...+..+.... .   +  .... +..+.. ++|+|
T Consensus       148 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~  225 (321)
T 2pk3_A          148 PMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSL--GFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTD  225 (321)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCT--TSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEE
T ss_pred             CCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCC--CchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEE
Confidence            677899999999999999988889999999999999998654  22333333322 2   3  2322 222222 78999


Q ss_pred             HHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCC-CCCCCCCCcccccccccccChHHH-Hhccccccc
Q 020334          232 IDDVARAHIFLLEYPDAKGRYICS-SAKLTIQEMAEFLSAKHPEY-PIPNVDSLSEIEGYKLSALSSKKL-LDICFTYKY  308 (327)
Q Consensus       232 v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~e~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p~~  308 (327)
                      ++|+|++++.+++++..+++||++ ++.+|+.|+++.+.+.+|.. .+................+|++|+ +.|||+|++
T Consensus       226 v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~~lG~~p~~  305 (321)
T 2pk3_A          226 VRDIVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKDSTGWKPRI  305 (321)
T ss_dssp             HHHHHHHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGGCCSSCCSBCCBCCHHHHHHHCCCCCS
T ss_pred             HHHHHHHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeeccccCCCcccchhccCHHHHHHHcCCCcCC
Confidence            999999999999877667799974 56899999999999998831 111100000112235678999999 779999999


Q ss_pred             cHHHHHHHHHHHHHHc
Q 020334          309 GIDEMFDGAIKCCKER  324 (327)
Q Consensus       309 ~~~~~l~~~~~~~~~~  324 (327)
                      +++++|+++++|++++
T Consensus       306 ~~~e~l~~~~~~~~~~  321 (321)
T 2pk3_A          306 PLEKSLFEILQSYRQA  321 (321)
T ss_dssp             CHHHHHHHHHHHHHTC
T ss_pred             CHHHHHHHHHHHHhcC
Confidence            9999999999999863

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=5.3e-46  Score=331.47  Aligned_cols=305  Identities=17%  Similarity=0.221  Sum_probs=231.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCC-ChhHHHHHhcCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN-DPESFDAAIAGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~~~d~   81 (327)
                      +||+|||||||||||++|+++|+++ |++|++++| ++.....+.   .    ..+++++.+|++ |.+.+.++++++|+
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~~~~~---~----~~~v~~~~~Dl~~d~~~~~~~~~~~d~   94 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDM-QTDRLGDLV---K----HERMHFFEGDITINKEWVEYHVKKCDV   94 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEES-CCTTTGGGG---G----STTEEEEECCTTTCHHHHHHHHHHCSE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeC-Chhhhhhhc---c----CCCeEEEeCccCCCHHHHHHHhccCCE
Confidence            3679999999999999999999998 999999999 433322221   1    258999999999 99999999999999


Q ss_pred             EEEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           82 VIHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        82 vih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |||||+.....  ..++. +.+++|+.++.+++++|++.+  ++|||+||.++|+  .....+++|+++...  ..+...
T Consensus        95 Vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg--~~~~~~~~e~~~~~~--~~p~~~  167 (372)
T 3slg_A           95 ILPLVAIATPATYVKQPL-RVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYG--MCADEQFDPDASALT--YGPINK  167 (372)
T ss_dssp             EEECBCCCCHHHHHHCHH-HHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGB--SCCCSSBCTTTCCEE--ECCTTC
T ss_pred             EEEcCccccHHHHhhCHH-HHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhC--CCCCCCCCccccccc--cCCCCC
Confidence            99999976522  22444 788999999999999999987  8999999999996  344567777764210  011124


Q ss_pred             CchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC------CCchHHHHHHH-HhCCcccccccc-C-CCee
Q 020334          160 WGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK------FAGSVRSTLAM-VLGNREEYSILL-N-ISMV  230 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~-~-~~~i  230 (327)
                      |.++|+.+|..+|.+++.++++ +++++++||+++|||+....      ....+..++.. ..+....+...+ + ++|+
T Consensus       168 p~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  246 (372)
T 3slg_A          168 PRWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFT  246 (372)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECE
T ss_pred             CCCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEE
Confidence            6678999999999999999887 99999999999999986531      12244444443 345554443332 3 7999


Q ss_pred             eHHHHHHHHHHhhcCCC---CCceEEEec--cccCHHHHHHHHHHhCCC-CCCCC---CCCC-----ccc-----ccccc
Q 020334          231 HIDDVARAHIFLLEYPD---AKGRYICSS--AKLTIQEMAEFLSAKHPE-YPIPN---VDSL-----SEI-----EGYKL  291 (327)
Q Consensus       231 ~v~D~a~~~~~~~~~~~---~~~~y~~~~--~~~s~~e~~~~i~~~~~~-~~~~~---~~~~-----~~~-----~~~~~  291 (327)
                      |++|+|++++.+++++.   .+++||+++  +.+|+.|+++.+++.+|. .....   ....     ..+     .....
T Consensus       247 ~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (372)
T 3slg_A          247 YVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQN  326 (372)
T ss_dssp             EHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-------------CC
T ss_pred             EHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCccccce
Confidence            99999999999999874   567999755  589999999999997762 11100   0000     000     13446


Q ss_pred             cccChHHH-HhccccccccHHHHHHHHHHHHHHc
Q 020334          292 SALSSKKL-LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       292 ~~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      ..+|++|+ +.|||+|+++++++|+++++||+++
T Consensus       327 ~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  360 (372)
T 3slg_A          327 RVPKIENTMQELGWAPQFTFDDALRQIFEAYRGH  360 (372)
T ss_dssp             CCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred             eecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence            77899999 7799999999999999999999753

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=7.6e-45  Score=319.61  Aligned_cols=301  Identities=21%  Similarity=0.211  Sum_probs=229.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCC-CCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDP-EHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      +|+|||||||||||++++++|+++|  ++|++++|... .....+..+..    ..+++++.+|++|++++.+++.++|+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~d~   78 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLED----DPRYTFVKGDVADYELVKELVRKVDG   78 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTT----CTTEEEEECCTTCHHHHHHHHHTCSE
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhcc----CCceEEEEcCCCCHHHHHHHhhCCCE
Confidence            4689999999999999999999986  89999999432 22222222211    25789999999999999999999999


Q ss_pred             EEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           82 VIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        82 vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |||||+....  ...++. .++++|+.++.++++++++.+..++|||+||.++|+.  ....+++|+++         ..
T Consensus        79 vih~A~~~~~~~~~~~~~-~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~--~~~~~~~E~~~---------~~  146 (336)
T 2hun_A           79 VVHLAAESHVDRSISSPE-IFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGD--ILKGSFTENDR---------LM  146 (336)
T ss_dssp             EEECCCCCCHHHHHHCTH-HHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCC--CSSSCBCTTBC---------CC
T ss_pred             EEECCCCcChhhhhhCHH-HHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCC--CCCCCcCCCCC---------CC
Confidence            9999997542  122344 7899999999999999998862379999999999963  33567888875         35


Q ss_pred             CchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHH-hCCcccc-ccccC-CCeeeHHHHH
Q 020334          160 WGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-LGNREEY-SILLN-ISMVHIDDVA  236 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~i~v~D~a  236 (327)
                      |.++|+.+|..+|.+++.++++++++++++||+.+|||+...  ...+..+.... .+....+ ..+.+ ++|+|++|+|
T Consensus       147 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  224 (336)
T 2hun_A          147 PSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFP--EKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHV  224 (336)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCT--TSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCc--CchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHH
Confidence            577899999999999999998889999999999999998543  23344444333 3444333 22222 7999999999


Q ss_pred             HHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCCc-ccccccccccChHHH-HhccccccccHHHH
Q 020334          237 RAHIFLLEYPDAKGRYICS-SAKLTIQEMAEFLSAKHPEYPIPNVDSLS-EIEGYKLSALSSKKL-LDICFTYKYGIDEM  313 (327)
Q Consensus       237 ~~~~~~~~~~~~~~~y~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~-~~lg~~p~~~~~~~  313 (327)
                      ++++.+++++..+++||++ ++.+|+.|+++.+++.++... +...... .......+.+|++|+ +.|||+|+++++++
T Consensus       225 ~~~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~  303 (336)
T 2hun_A          225 RAIELVLLKGESREIYNISAGEEKTNLEVVKIILRLMGKGE-ELIELVEDRPGHDLRYSLDSWKITRDLKWRPKYTFDEG  303 (336)
T ss_dssp             HHHHHHHHHCCTTCEEEECCSCEECHHHHHHHHHHHTTCCS-TTEEEECCCTTCCCCCCBCCHHHHHHHCCCCSSCHHHH
T ss_pred             HHHHHHHhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCCCc-ccccccCCCCCchhhhcCCHHHHHHHhCCCCCCCHHHH
Confidence            9999999876667799975 567999999999999988321 1100000 111223467899999 77999999999999


Q ss_pred             HHHHHHHHHHc
Q 020334          314 FDGAIKCCKER  324 (327)
Q Consensus       314 l~~~~~~~~~~  324 (327)
                      |+++++|++++
T Consensus       304 l~~~~~~~~~~  314 (336)
T 2hun_A          304 IKKTIDWYLKN  314 (336)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHHhC
Confidence            99999999864

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=4.3e-45  Score=323.81  Aligned_cols=303  Identities=16%  Similarity=0.099  Sum_probs=228.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC--CCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG--CAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~v   82 (327)
                      +|+|||||||||||++++++|+++|++|++++|+ +.....+.....   ...+++++.+|++|++++.+++++  +|+|
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   84 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLT-APTVPSLFETAR---VADGMQSEIGDIRDQNKLLESIREFQPEIV   84 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-CSSSSCHHHHTT---TTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCC-CcccchhhHhhc---cCCceEEEEccccCHHHHHHHHHhcCCCEE
Confidence            5789999999999999999999999999999994 333222211111   125789999999999999998875  8999


Q ss_pred             EEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           83 IHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        83 ih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      ||||+....  ...++. ..+++|+.++.++++++++.+.+++|||+||.++|+.. ....+++|+++         ..|
T Consensus        85 ih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~-~~~~~~~E~~~---------~~~  153 (357)
T 1rkx_A           85 FHMAAQPLVRLSYSEPV-ETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNK-EWIWGYRENEA---------MGG  153 (357)
T ss_dssp             EECCSCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCC-CSSSCBCTTSC---------BCC
T ss_pred             EECCCCcccccchhCHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCC-CcCCCCCCCCC---------CCC
Confidence            999995331  122343 78999999999999999987547899999999999632 22346777764         355


Q ss_pred             chhhHhhhHHHHHHHHHHHHHc---------CCcEEEEecCceecCCCCCCCCchHHHHHHHH-hCCccccccccC-CCe
Q 020334          161 GKSYVLTKTLTERAALEFAEEH---------GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-LGNREEYSILLN-ISM  229 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~---------~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~  229 (327)
                      .++|+.+|..+|.+++.+++++         +++++++||+.+|||+.... ...+..++... .+....+..+.. ++|
T Consensus       154 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~  232 (357)
T 1rkx_A          154 YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL-DRIVPDILRAFEQSQPVIIRNPHAIRPW  232 (357)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS-SCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc-ccHHHHHHHHHhcCCCEEECCCCCeecc
Confidence            7789999999999999998764         99999999999999975431 23455554443 344444433333 799


Q ss_pred             eeHHHHHHHHHHhhcC-----CCCCceEEEe---ccccCHHHHHHHHHHhCCC-CCCCCCCCCcccccccccccChHHH-
Q 020334          230 VHIDDVARAHIFLLEY-----PDAKGRYICS---SAKLTIQEMAEFLSAKHPE-YPIPNVDSLSEIEGYKLSALSSKKL-  299 (327)
Q Consensus       230 i~v~D~a~~~~~~~~~-----~~~~~~y~~~---~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~k~-  299 (327)
                      +|++|+|++++.++++     ...+++||++   ++.+|+.|+++.+.+.+|. ..+... ............+|++|+ 
T Consensus       233 v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~-~~~~~~~~~~~~~d~~k~~  311 (357)
T 1rkx_A          233 QHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLD-GNAHPHEAHYLKLDCSKAK  311 (357)
T ss_dssp             EETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC--------CCCCCCBCCHHHH
T ss_pred             EeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccC-CCCCCcCcccccCCHHHHH
Confidence            9999999999998874     2346799975   3579999999999998872 221110 001112345678999999 


Q ss_pred             HhccccccccHHHHHHHHHHHHHHc
Q 020334          300 LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       300 ~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      +.|||+|+++++++|+++++|++++
T Consensus       312 ~~lG~~p~~~l~e~l~~~~~~~~~~  336 (357)
T 1rkx_A          312 MQLGWHPRWNLNTTLEYIVGWHKNW  336 (357)
T ss_dssp             HHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHhCCCcCCcHHHHHHHHHHHHHHH
Confidence            7799999999999999999999764

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=1.5e-44  Score=319.18  Aligned_cols=303  Identities=17%  Similarity=0.196  Sum_probs=229.8

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHC--CCeEEEEEcCCCC-CcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDH--GYFVTTTVRSDPE-HKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      |+. ||+|||||||||||++++++|+++  |++|++++|+... ....+..+.     ..+++++.+|++|++++.++++
T Consensus         1 Ms~-m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~   74 (348)
T 1oc2_A            1 MSQ-FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-----GDRVELVVGDIADAELVDKLAA   74 (348)
T ss_dssp             --C-CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC-----SSSEEEEECCTTCHHHHHHHHT
T ss_pred             CCc-CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc-----cCCeEEEECCCCCHHHHHHHhh
Confidence            553 578999999999999999999998  8999999994321 222222221     2478999999999999999999


Q ss_pred             CCCEEEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCC----------CCCcccC
Q 020334           78 GCAGVIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGK----------DVDMLDE  145 (327)
Q Consensus        78 ~~d~vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~----------~~~~~~E  145 (327)
                      ++|+|||||+....  ...++. ..+++|+.++.++++++++.+ + +|||+||.++|+....          ...+++|
T Consensus        75 ~~d~vih~A~~~~~~~~~~~~~-~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E  151 (348)
T 1oc2_A           75 KADAIVHYAAESHNDNSLNDPS-PFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTA  151 (348)
T ss_dssp             TCSEEEECCSCCCHHHHHHCCH-HHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCT
T ss_pred             cCCEEEECCcccCccchhhCHH-HHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCCCcccccccccccccCCCcCC
Confidence            99999999997542  122344 789999999999999999987 6 9999999999963311          1157788


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHH-HhCCcccc-cc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAM-VLGNREEY-SI  223 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~-~~  223 (327)
                      +++         ..|.++|+.+|..+|.+++.++++++++++++||+.+|||+...  ...+..+... ..+....+ ..
T Consensus       152 ~~~---------~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~  220 (348)
T 1oc2_A          152 ETN---------YNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHI--EKFIPRQITNILAGIKPKLYGE  220 (348)
T ss_dssp             TSC---------CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCT--TSHHHHHHHHHHHTCCCEEETT
T ss_pred             CCC---------CCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCc--cchHHHHHHHHHcCCCceEecC
Confidence            775         25577899999999999999998889999999999999998643  2333333333 34444333 22


Q ss_pred             ccC-CCeeeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCCc-ccccccccccChHHH-
Q 020334          224 LLN-ISMVHIDDVARAHIFLLEYPDAKGRYICS-SAKLTIQEMAEFLSAKHPEYPIPNVDSLS-EIEGYKLSALSSKKL-  299 (327)
Q Consensus       224 ~~~-~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~-  299 (327)
                      +.+ ++|+|++|+|++++.+++.+..+++||++ ++.+|+.|+++.+.+.+|... +...... .......+.+|++|+ 
T Consensus       221 ~~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~d~~k~~  299 (348)
T 1oc2_A          221 GKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPK-DAYDHVTDRAGHDLRYAIDASKLR  299 (348)
T ss_dssp             SCCEEECEEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCT-TCSEEECCCTTCCCBCCBCCHHHH
T ss_pred             CCceEeeEEHHHHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCc-cccccCCCCCCcccccccCHHHHH
Confidence            223 79999999999999999876666799975 567999999999999988321 1100001 111223466899999 


Q ss_pred             Hhcccccccc-HHHHHHHHHHHHHHc
Q 020334          300 LDICFTYKYG-IDEMFDGAIKCCKER  324 (327)
Q Consensus       300 ~~lg~~p~~~-~~~~l~~~~~~~~~~  324 (327)
                      +.|||+|+++ ++++|+++++|++++
T Consensus       300 ~~lG~~p~~~~~~~~l~~~~~~~~~~  325 (348)
T 1oc2_A          300 DELGWTPQFTDFSEGLEETIQWYTDN  325 (348)
T ss_dssp             HHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred             HHcCCCCCCCcHHHHHHHHHHHHHHh
Confidence            7799999998 999999999999864

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=8.4e-45  Score=320.08  Aligned_cols=295  Identities=20%  Similarity=0.255  Sum_probs=220.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +|+|||||||||||++++++|+++|++|++++| ++.....+.        ..+++++.+|++|++++.++++++|+|||
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l~--------~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   83 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHR-PSSQIQRLA--------YLEPECRVAEMLDHAGLERALRGLDGVIF   83 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC-TTSCGGGGG--------GGCCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec-ChHhhhhhc--------cCCeEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            468999999999999999999999999999999 443332221        13688999999999999999999999999


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC----
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW----  160 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~----  160 (327)
                      +|+....+..++. +.+++|+.++.+++++|++.+ +++|||+||.++|+.......+ +|+++.         .|    
T Consensus        84 ~a~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~-~E~~~~---------~p~~~~  151 (342)
T 2x4g_A           84 SAGYYPSRPRRWQ-EEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGLPG-HEGLFY---------DSLPSG  151 (342)
T ss_dssp             C-------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCTTSSCB-CTTCCC---------SSCCTT
T ss_pred             CCccCcCCCCCHH-HHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCCCCCCC-CCCCCC---------Cccccc
Confidence            9997654333444 789999999999999999987 8999999999999633222234 777752         44    


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCC-CCCCCchHHHHHHH-HhCCccccccccCCCeeeHHHHHHH
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFI-CPKFAGSVRSTLAM-VLGNREEYSILLNISMVHIDDVARA  238 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~  238 (327)
                      .++|+.+|..+|.+++.++++ +++++++||+.+|||+. ...    +..+... ..+....+ ....++|+|++|+|++
T Consensus       152 ~~~Y~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~~  225 (342)
T 2x4g_A          152 KSSYVLCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPT----TGRVITAIGNGEMTHY-VAGQRNVIDAAEAGRG  225 (342)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCS----TTHHHHHHHTTCCCEE-ECCEEEEEEHHHHHHH
T ss_pred             cChHHHHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCcccc----HHHHHHHHHcCCCccc-cCCCcceeeHHHHHHH
Confidence            678999999999999999876 99999999999999976 311    2222232 23333333 2223799999999999


Q ss_pred             HHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCC-CC--CCCCC-------------CCc-------c-c-ccccccc
Q 020334          239 HIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPE-YP--IPNVD-------------SLS-------E-I-EGYKLSA  293 (327)
Q Consensus       239 ~~~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~~~~~-~~--~~~~~-------------~~~-------~-~-~~~~~~~  293 (327)
                      ++.+++++..+++||+++..+|+.|+++.+.+.+|. ..  +|...             ...       . . .......
T Consensus       226 ~~~~~~~~~~g~~~~v~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (342)
T 2x4g_A          226 LLMALERGRIGERYLLTGHNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQF  305 (342)
T ss_dssp             HHHHHHHSCTTCEEEECCEEEEHHHHHHHHHHHHTCCCCEEECHHHHHHHHHHHHC----------------CCTTCCCC
T ss_pred             HHHHHhCCCCCceEEEcCCcccHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcc
Confidence            999998776677999754339999999999998872 11  11100             000       0 0 0124577


Q ss_pred             cChHHH-Hhccc-cccccHHHHHHHHHHHHHHcCCC
Q 020334          294 LSSKKL-LDICF-TYKYGIDEMFDGAIKCCKERGYL  327 (327)
Q Consensus       294 ~d~~k~-~~lg~-~p~~~~~~~l~~~~~~~~~~~~~  327 (327)
                      +|++|+ +.||| +| ++++++|+++++|++++|++
T Consensus       306 ~d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~g~~  340 (342)
T 2x4g_A          306 LDGRKAREELGFFST-TALDDTLLRAIDWFRDNGYF  340 (342)
T ss_dssp             BCCHHHHHHHCCCCC-SCHHHHHHHHHHHHHHTTCC
T ss_pred             cChHHHHHhCCCCCC-CCHHHHHHHHHHHHHHcCCC
Confidence            899999 77999 99 69999999999999999875

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-44  Score=318.25  Aligned_cols=304  Identities=17%  Similarity=0.134  Sum_probs=229.1

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC-cchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC--C
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH-KKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG--C   79 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~   79 (327)
                      .++|+|||||||||||++++++|+++|++|++++|+.... ...+..+.    ...+++++.+|++|++++.+++++  +
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~~~   87 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG----IEGDIQYEDGDMADACSVQRAVIKAQP   87 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT----CGGGEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc----ccCceEEEECCCCCHHHHHHHHHHcCC
Confidence            3578999999999999999999999999999999943321 11122111    124789999999999999998874  7


Q ss_pred             CEEEEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCc-cEEEEeccceeeeecCCCCCcccCCCCCChhHhhh
Q 020334           80 AGVIHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTV-KRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRK  156 (327)
Q Consensus        80 d~vih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~  156 (327)
                      |+|||||+.....  ..++. ..+++|+.++.++++++++.+ + ++|||+||.++|+  .....+++|+++        
T Consensus        88 d~Vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v~g--~~~~~~~~E~~~--------  155 (335)
T 1rpn_A           88 QEVYNLAAQSFVGASWNQPV-TTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFG--LIQAERQDENTP--------  155 (335)
T ss_dssp             SEEEECCSCCCHHHHTTSHH-HHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGC--SCSSSSBCTTSC--------
T ss_pred             CEEEECccccchhhhhhChH-HHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHHhC--CCCCCCCCcccC--------
Confidence            9999999975421  23444 889999999999999999887 5 8999999999996  334567888876        


Q ss_pred             cCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC-chHHHHHHH-HhCCccc--cccccC-CCeee
Q 020334          157 LDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA-GSVRSTLAM-VLGNREE--YSILLN-ISMVH  231 (327)
Q Consensus       157 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~-~~~~~~~~~-~~~~~~~--~~~~~~-~~~i~  231 (327)
                       ..|.++|+.+|..+|.+++.++++++++++++||+++|||+...... ..+..++.. ..+....  ++.+.+ ++|+|
T Consensus       156 -~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~  234 (335)
T 1rpn_A          156 -FYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGF  234 (335)
T ss_dssp             -CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEE
T ss_pred             -CCCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEE
Confidence             35677899999999999999998889999999999999997653221 123333333 3343322  232223 79999


Q ss_pred             HHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCC-C--CCCCCCCcccccccccccChHHH-Hhccccc
Q 020334          232 IDDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEY-P--IPNVDSLSEIEGYKLSALSSKKL-LDICFTY  306 (327)
Q Consensus       232 v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~-~--~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p  306 (327)
                      ++|+|++++.+++++. +++||+ +++.+|+.|+++.+.+.+|.. .  ++...............+|++|+ ++|||+|
T Consensus       235 v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p  313 (335)
T 1rpn_A          235 AGDYVEAMWLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKP  313 (335)
T ss_dssp             HHHHHHHHHHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHhcCC-CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHHHHhcCCCc
Confidence            9999999999998865 579997 567899999999999998831 1  11100001112234567899999 7899999


Q ss_pred             cccHHHHHHHHHHHHHHc
Q 020334          307 KYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       307 ~~~~~~~l~~~~~~~~~~  324 (327)
                      +++++++|+++++|++++
T Consensus       314 ~~~l~e~l~~~~~~~~~~  331 (335)
T 1rpn_A          314 RTSLDELIRMMVEADLRR  331 (335)
T ss_dssp             CSCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHh
Confidence            999999999999999864

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=6e-45  Score=316.87  Aligned_cols=295  Identities=23%  Similarity=0.251  Sum_probs=225.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi   83 (327)
                      |+|||||||||||++++++|+++|++|++++|........+         ..+++++.+|++|++++.++++  ++|+||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   71 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV---------PKGVPFFRVDLRDKEGVERAFREFRPTHVS   71 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS---------CTTCCEECCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc---------ccCeEEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            47999999999999999999999999999998332221111         1367889999999999999887  899999


Q ss_pred             EccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccc-eeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           84 HVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSG-STVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        84 h~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~-~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      |+|+....  ...++. ..+++|+.++.++++++++.+ +++|||+||. ++|+.. ....+++|+++         ..|
T Consensus        72 ~~a~~~~~~~~~~~~~-~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~~g~~-~~~~~~~E~~~---------~~~  139 (311)
T 2p5y_A           72 HQAAQASVKVSVEDPV-LDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAIYGEV-PEGERAEETWP---------PRP  139 (311)
T ss_dssp             ECCSCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHHHCCC-CTTCCBCTTSC---------CCC
T ss_pred             ECccccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhhcCCC-CCCCCcCCCCC---------CCC
Confidence            99986542  122344 789999999999999999887 8899999998 888521 33457788875         245


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC-CchHHHHHHHH-hCCcccc------ccccC-CCeee
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKF-AGSVRSTLAMV-LGNREEY------SILLN-ISMVH  231 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~-~~~~~~~~~~~-~~~~~~~------~~~~~-~~~i~  231 (327)
                      .++|+.+|..+|.+++.++++++++++++||+++|||+..... ...+..+.... .+.+..+      ..+.+ ++|+|
T Consensus       140 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  219 (311)
T 2p5y_A          140 KSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVY  219 (311)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEE
T ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEE
Confidence            6789999999999999998888999999999999999865432 22333443332 3444322      22223 79999


Q ss_pred             HHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHHHhccccccccH
Q 020334          232 IDDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKYGI  310 (327)
Q Consensus       232 v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~  310 (327)
                      ++|+|++++.+++++  +++||+ +++.+|++|+++.+++.+|. +.+...............+|++|+++|||+|++++
T Consensus       220 v~Dva~a~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~  296 (311)
T 2p5y_A          220 VGDVAEAHALALFSL--EGIYNVGTGEGHTTREVLMAVAEAAGK-APEVQPAPPRPGDLERSVLSPLKLMAHGWRPKVGF  296 (311)
T ss_dssp             HHHHHHHHHHHHHHC--CEEEEESCSCCEEHHHHHHHHHHHHTC-CCCEEEECCCTTCCSBCCBCCHHHHTTTCCCSSCH
T ss_pred             HHHHHHHHHHHHhCC--CCEEEeCCCCCccHHHHHHHHHHHhCC-CCCceeCCCCccchhhccCCHHHHHHCCCCCCCCH
Confidence            999999999999875  779997 56789999999999998873 11110001111233467899999933999999999


Q ss_pred             HHHHHHHHHHHHHc
Q 020334          311 DEMFDGAIKCCKER  324 (327)
Q Consensus       311 ~~~l~~~~~~~~~~  324 (327)
                      +++|+++++|++++
T Consensus       297 ~~~l~~~~~~~~~~  310 (311)
T 2p5y_A          297 QEGIRLTVDHFRGA  310 (311)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999999864

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=1.5e-44  Score=319.24  Aligned_cols=305  Identities=19%  Similarity=0.207  Sum_probs=228.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC------CcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE------HKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      |+|+|||||||||||++++++|+++|++|++++|....      .......+....  ..+++++.+|++|++++.++++
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~   78 (348)
T 1ek6_A            1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRLFK   78 (348)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc--CCceEEEECCCCCHHHHHHHHH
Confidence            46899999999999999999999999999999984322      122222221100  1468999999999999999988


Q ss_pred             --CCCEEEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhH
Q 020334           78 --GCAGVIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDY  153 (327)
Q Consensus        78 --~~d~vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~  153 (327)
                        ++|+|||+|+....  ...++. +.+++|+.++.++++++++.+ +++|||+||.++|+  .....+++|+++.    
T Consensus        79 ~~~~d~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g--~~~~~~~~E~~~~----  150 (348)
T 1ek6_A           79 KYSFMAVIHFAGLKAVGESVQKPL-DYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYG--NPQYLPLDEAHPT----  150 (348)
T ss_dssp             HCCEEEEEECCSCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGC--SCSSSSBCTTSCC----
T ss_pred             hcCCCEEEECCCCcCccchhhchH-HHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhC--CCCCCCcCCCCCC----
Confidence              89999999997542  122333 789999999999999999887 88999999999986  3456788888752    


Q ss_pred             hhhcCCC-chhhHhhhHHHHHHHHHHHHH-cCCcEEEEecCceecCCCCCC--------CCchHHHHHHHHhCCc--ccc
Q 020334          154 IRKLDIW-GKSYVLTKTLTERAALEFAEE-HGLDLVTLIPSFVVGPFICPK--------FAGSVRSTLAMVLGNR--EEY  221 (327)
Q Consensus       154 ~~~~~~~-~~~Y~~sK~~~e~~~~~~~~~-~~~~~~i~R~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~--~~~  221 (327)
                           .| .++|+.+|..+|.+++.++++ .+++++++||+++|||+....        ....+..+.....+..  ..+
T Consensus       151 -----~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (348)
T 1ek6_A          151 -----GGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNV  225 (348)
T ss_dssp             -----CCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEE
T ss_pred             -----CCCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEE
Confidence                 34 678999999999999999876 239999999999999953110        1234444444444222  221


Q ss_pred             c-------cccC-CCeeeHHHHHHHHHHhhcCC--CCC-ceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcccccc
Q 020334          222 S-------ILLN-ISMVHIDDVARAHIFLLEYP--DAK-GRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGY  289 (327)
Q Consensus       222 ~-------~~~~-~~~i~v~D~a~~~~~~~~~~--~~~-~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~  289 (327)
                      .       .+.+ ++|+|++|+|++++.+++++  ..+ ++||+ +++.+|+.|+++.+++.+|. +++...........
T Consensus       226 ~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~  304 (348)
T 1ek6_A          226 FGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGK-KIPYKVVARREGDV  304 (348)
T ss_dssp             ECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCS-CCCEEEECCCTTCC
T ss_pred             eCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCC-CCceeeCCCCCccc
Confidence            1       2222 79999999999999999764  344 68997 56789999999999998872 22210001111234


Q ss_pred             cccccChHHH-HhccccccccHHHHHHHHHHHHHHc
Q 020334          290 KLSALSSKKL-LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       290 ~~~~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      ....+|++|+ +.|||+|+++++++|+++++|++++
T Consensus       305 ~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~  340 (348)
T 1ek6_A          305 AACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQN  340 (348)
T ss_dssp             SEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             hhhccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhc
Confidence            4577999999 8899999999999999999999875

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=1.5e-44  Score=322.50  Aligned_cols=300  Identities=18%  Similarity=0.171  Sum_probs=222.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      +|+|||||||||||++++++|+++| ++|++++|+.......+.       ...+++++.+|++|++++.++++++|+||
T Consensus        32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~-------~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi  104 (377)
T 2q1s_A           32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP-------DHPAVRFSETSITDDALLASLQDEYDYVF  104 (377)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC-------CCTTEEEECSCTTCHHHHHHCCSCCSEEE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc-------CCCceEEEECCCCCHHHHHHHhhCCCEEE
Confidence            5789999999999999999999999 999999994332221111       12578999999999999999999999999


Q ss_pred             EccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhc-CCccEEEEeccceeeeecCCCCCccc--CCCCCChhHhhhcC
Q 020334           84 HVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKS-GTVKRFVYTSSGSTVYFSGKDVDMLD--ETFWSDEDYIRKLD  158 (327)
Q Consensus        84 h~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~v~~~~~~~~~~~~--E~~~~~~~~~~~~~  158 (327)
                      |+|+.....  ..++. +.+++|+.++.+++++|++. + +++|||+||.++|+.  ....+++  |+++..      ..
T Consensus       105 h~A~~~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~vyg~--~~~~~~~~~E~~~~~------~~  174 (377)
T 2q1s_A          105 HLATYHGNQSSIHDPL-ADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGCSIAE--KTFDDAKATEETDIV------SL  174 (377)
T ss_dssp             ECCCCSCHHHHHHCHH-HHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC----------------CCCCCC------CS
T ss_pred             ECCCccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHHHcCC--CCCCCcCcccccccc------cc
Confidence            999975421  12333 78999999999999999988 6 889999999999963  3345677  776210      02


Q ss_pred             -CCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCC---------CCC--CCchHHHHHHHH-hCCccccc-cc
Q 020334          159 -IWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFI---------CPK--FAGSVRSTLAMV-LGNREEYS-IL  224 (327)
Q Consensus       159 -~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~---------~~~--~~~~~~~~~~~~-~~~~~~~~-~~  224 (327)
                       .|.++|+.+|..+|.+++.++++++++++++||+.+|||+.         ...  ....+..++... .+....+. .+
T Consensus       175 ~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g  254 (377)
T 2q1s_A          175 HNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGG  254 (377)
T ss_dssp             SCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGG
T ss_pred             cCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCC
Confidence             45678999999999999999888899999999999999976         210  023344444433 34443332 22


Q ss_pred             cC-CCeeeHHHHHHH-HHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCC-CCCCCCCCCccccccc-ccccChHHH
Q 020334          225 LN-ISMVHIDDVARA-HIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPE-YPIPNVDSLSEIEGYK-LSALSSKKL  299 (327)
Q Consensus       225 ~~-~~~i~v~D~a~~-~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~-~~~~d~~k~  299 (327)
                      .+ ++|+|++|+|++ ++.+++++.. |+||+ +++.+|+.|+++.+++.+|. ..+... + ....... ...+|++|+
T Consensus       255 ~~~~~~i~v~Dva~a~i~~~~~~~~~-g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~-p-~~~~~~~~~~~~d~~k~  331 (377)
T 2q1s_A          255 VATRDFIFVEDVANGLIACAADGTPG-GVYNIASGKETSIADLATKINEITGNNTELDRL-P-KRPWDNSGKRFGSPEKA  331 (377)
T ss_dssp             CCEECCEEHHHHHHHHHHHHHHCCTT-EEEECCCCCCEEHHHHHHHHHHHHTCCSCCCCC-C-CCGGGCC-CCCCCCHHH
T ss_pred             CeEEeeEEHHHHHHHHHHHHHhcCCC-CeEEecCCCceeHHHHHHHHHHHhCCCCCceeC-C-CCccccccccccCHHHH
Confidence            33 799999999999 9999988664 49997 45789999999999998873 222111 1 1112234 678999999


Q ss_pred             -HhccccccccHHHHHHHHHHHHHHc
Q 020334          300 -LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       300 -~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                       +.|||+|+++++++|+++++|++++
T Consensus       332 ~~~lG~~p~~~l~e~l~~~~~~~~~~  357 (377)
T 2q1s_A          332 RRELGFSADVSIDDGLRKTIEWTKAN  357 (377)
T ss_dssp             HHHHCCCCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence             7899999999999999999999864

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=2.2e-44  Score=316.78  Aligned_cols=299  Identities=21%  Similarity=0.233  Sum_probs=229.4

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHC---C---CeEEEEEcCCCC-CcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDH---G---YFVTTTVRSDPE-HKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG   78 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~---g---~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~   78 (327)
                      |+|||||||||||++++++|+++   |   ++|++++|.... ....+..+..    ..+++++.+|++|++++.+++.+
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~   76 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDA----DPRLRFVHGDIRDAGLLARELRG   76 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTT----CTTEEEEECCTTCHHHHHHHTTT
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhccc----CCCeEEEEcCCCCHHHHHHHhcC
Confidence            47999999999999999999997   8   999999994321 2222222211    25789999999999999999999


Q ss_pred             CCEEEEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhh
Q 020334           79 CAGVIHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRK  156 (327)
Q Consensus        79 ~d~vih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~  156 (327)
                      +|+|||||+.....  ..++. +.+++|+.++.++++++++.+ +++|||+||.++|+.  ....+++|+++        
T Consensus        77 ~d~Vih~A~~~~~~~~~~~~~-~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vyg~--~~~~~~~E~~~--------  144 (337)
T 1r6d_A           77 VDAIVHFAAESHVDRSIAGAS-VFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGS--IDSGSWTESSP--------  144 (337)
T ss_dssp             CCEEEECCSCCCHHHHHHCCH-HHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCC--CSSSCBCTTSC--------
T ss_pred             CCEEEECCCccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHhCC--CCCCCCCCCCC--------
Confidence            99999999975421  12344 789999999999999999987 889999999999963  33467888875        


Q ss_pred             cCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHH-HhCCcccc-ccccC-CCeeeHH
Q 020334          157 LDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAM-VLGNREEY-SILLN-ISMVHID  233 (327)
Q Consensus       157 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~-~~~i~v~  233 (327)
                       ..|.++|+.+|..+|.+++.++++++++++++||+.+|||+...  ...+..+... ..+....+ ..+.+ ++|+|++
T Consensus       145 -~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  221 (337)
T 1r6d_A          145 -LEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP--EKLIPLFVTNLLDGGTLPLYGDGANVREWVHTD  221 (337)
T ss_dssp             -CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT--TSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHH
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCC--CChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHH
Confidence             35677899999999999999998889999999999999998643  2334444433 33444333 22223 7999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCCc-ccccccccccChHHH-HhccccccccH
Q 020334          234 DVARAHIFLLEYPDAKGRYICS-SAKLTIQEMAEFLSAKHPEYPIPNVDSLS-EIEGYKLSALSSKKL-LDICFTYKYGI  310 (327)
Q Consensus       234 D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~-~~lg~~p~~~~  310 (327)
                      |+|++++.+++++..+++||++ ++.+|+.|+++.+++.++.. .+...... .......+.+|++|+ +.|||+|++++
T Consensus       222 Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~  300 (337)
T 1r6d_A          222 DHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGAD-WSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSF  300 (337)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCC-GGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCH
T ss_pred             HHHHHHHHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCCC-cccceecCCCCCCcceeecCHHHHHHHcCCCCCCCH
Confidence            9999999999876667799975 56799999999999988732 11000000 111223456899999 77999999999


Q ss_pred             HHHHHHHHHHHHHc
Q 020334          311 DEMFDGAIKCCKER  324 (327)
Q Consensus       311 ~~~l~~~~~~~~~~  324 (327)
                      +++|+++++|++++
T Consensus       301 ~e~l~~~~~~~~~~  314 (337)
T 1r6d_A          301 ADGLARTVRWYREN  314 (337)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999999864

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.1e-44  Score=316.02  Aligned_cols=290  Identities=18%  Similarity=0.132  Sum_probs=221.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC--CCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG--CAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~   81 (327)
                      ++|+|||||||||||++++++|+++|+      + .....             ..++++.+|++|++.+.+++++  +|+
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~~g~------~-~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~~~~d~   64 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVADGAG------L-PGEDW-------------VFVSSKDADLTDTAQTRALFEKVQPTH   64 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHTTTC------C-TTCEE-------------EECCTTTCCTTSHHHHHHHHHHSCCSE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhcCC------c-ccccc-------------cccCceecccCCHHHHHHHHhhcCCCE
Confidence            478999999999999999999999997      2 11111             2345567999999999999986  999


Q ss_pred             EEEccCCCCC---CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcC
Q 020334           82 VIHVAAPIDI---DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLD  158 (327)
Q Consensus        82 vih~a~~~~~---~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (327)
                      |||||+....   ...++. +.+++|+.++.+++++|++.+ +++|||+||.++|+  .....+++|+++...    + .
T Consensus        65 Vih~A~~~~~~~~~~~~~~-~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~vyg--~~~~~~~~E~~~~~~----~-~  135 (319)
T 4b8w_A           65 VIHLAAMVGGLFRNIKYNL-DFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCIFP--DKTTYPIDETMIHNG----P-P  135 (319)
T ss_dssp             EEECCCCCCCHHHHTTCHH-HHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSC--SSCCSSBCGGGGGBS----C-C
T ss_pred             EEECceecccccccccCHH-HHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhhcC--CCCCCCccccccccC----C-C
Confidence            9999997541   233444 889999999999999999988 89999999999995  455668888863110    0 2


Q ss_pred             CCch-hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC--CchHHHHHHH-----HhCCccccc-cccC-CC
Q 020334          159 IWGK-SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKF--AGSVRSTLAM-----VLGNREEYS-ILLN-IS  228 (327)
Q Consensus       159 ~~~~-~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~--~~~~~~~~~~-----~~~~~~~~~-~~~~-~~  228 (327)
                      .|.+ +|+.+|..+|++++.++++.+++++++||+++|||+.....  ...+..++..     ..+....+. .+.+ ++
T Consensus       136 ~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  215 (319)
T 4b8w_A          136 HNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQ  215 (319)
T ss_dssp             CSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEEC
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEE
Confidence            3333 69999999999999999888999999999999999865321  2334433332     344444433 3333 79


Q ss_pred             eeeHHHHHHHHHHhhcCCCC--CceEEE-eccccCHHHHHHHHHHhCCC-CCCCCCCCCcccccccccccChHHH-Hhcc
Q 020334          229 MVHIDDVARAHIFLLEYPDA--KGRYIC-SSAKLTIQEMAEFLSAKHPE-YPIPNVDSLSEIEGYKLSALSSKKL-LDIC  303 (327)
Q Consensus       229 ~i~v~D~a~~~~~~~~~~~~--~~~y~~-~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg  303 (327)
                      |+|++|+|++++.+++++..  +++||+ +++.+|+.|+++.+++.+|. ..+..  ............+|++|+ +.||
T Consensus       216 ~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~--~~~~~~~~~~~~~d~~k~~~~lg  293 (319)
T 4b8w_A          216 FIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTF--DTTKSDGQFKKTASNSKLRTYLP  293 (319)
T ss_dssp             EEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEE--ETTSCCCCSCCCBCCHHHHHHCT
T ss_pred             EEeHHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEe--CCCCCcCcccccCCHHHHHHhcC
Confidence            99999999999999987433  458986 57899999999999999983 11111  111112334567999999 7799


Q ss_pred             ccccccHHHHHHHHHHHHHHc
Q 020334          304 FTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       304 ~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      |.|.++++++|+++++||+++
T Consensus       294 ~~p~~~~~~~l~~~~~~~~~~  314 (319)
T 4b8w_A          294 DFRFTPFKQAVKETCAWFTDN  314 (319)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHS
T ss_pred             CCCCCCHHHHHHHHHHHHHHH
Confidence            999999999999999999875

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=7.5e-45  Score=317.53  Aligned_cols=290  Identities=18%  Similarity=0.090  Sum_probs=220.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC---CcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE---HKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      |+|+|||||||||||++++++|+++|++|++++|+...   ....+..+..    ..+++++.+|+.          ++|
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~----------~~d   71 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLE----KPVLELEERDLS----------DVR   71 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEEC----SCGGGCCHHHHT----------TEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhcc----CCCeeEEeCccc----------cCC
Confidence            47899999999999999999999999999999994431   2222211111    134555566654          789


Q ss_pred             EEEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcC
Q 020334           81 GVIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLD  158 (327)
Q Consensus        81 ~vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (327)
                      +|||+|+....  ....+. ..++ |+.++.+++++|++.+ +++|||+||.++|+  .....+++|+++         .
T Consensus        72 ~vi~~a~~~~~~~~~~~~~-~~~~-n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~--~~~~~~~~E~~~---------~  137 (321)
T 3vps_A           72 LVYHLASHKSVPRSFKQPL-DYLD-NVDSGRHLLALCTSVG-VPKVVVGSTCEVYG--QADTLPTPEDSP---------L  137 (321)
T ss_dssp             EEEECCCCCCHHHHTTSTT-TTHH-HHHHHHHHHHHHHHHT-CCEEEEEEEGGGGC--SCSSSSBCTTSC---------C
T ss_pred             EEEECCccCChHHHHhCHH-HHHH-HHHHHHHHHHHHHHcC-CCeEEEecCHHHhC--CCCCCCCCCCCC---------C
Confidence            99999997652  122333 5566 9999999999999998 89999999999996  445668888876         3


Q ss_pred             CCchhhHhhhHHHHHHHHHHHHHcCC-cEEEEecCceecCCCCCCCCchHHHHHHH-HhCCcccccc-ccC-CCeeeHHH
Q 020334          159 IWGKSYVLTKTLTERAALEFAEEHGL-DLVTLIPSFVVGPFICPKFAGSVRSTLAM-VLGNREEYSI-LLN-ISMVHIDD  234 (327)
Q Consensus       159 ~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~-~~~i~v~D  234 (327)
                      .|.++|+.+|..+|.+++.+++++++ +++++||+.+|||+...  ...+..+... ..+....+.. +.. ++|+|++|
T Consensus       138 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  215 (321)
T 3vps_A          138 SPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERP--DALVPRLCANLLTRNELPVEGDGEQRRDFTYITD  215 (321)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCT--TSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCC--CChHHHHHHHHHcCCCeEEeCCCCceEceEEHHH
Confidence            56789999999999999999988899 99999999999998654  3344444443 3344433332 223 79999999


Q ss_pred             HHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHH-Hhccccc-cccHH
Q 020334          235 VARAHIFLLEYPDAKGRYICS-SAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL-LDICFTY-KYGID  311 (327)
Q Consensus       235 ~a~~~~~~~~~~~~~~~y~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p-~~~~~  311 (327)
                      +|++++.+++++..+ +||++ ++.+|+.|+++.+. .++.. .+...............+|++|+ +.|||+| +++++
T Consensus       216 va~~~~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~-~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~  292 (321)
T 3vps_A          216 VVDKLVALANRPLPS-VVNFGSGQSLSVNDVIRILQ-ATSPA-AEVARKQPRPNEITEFRADTALQTRQIGERSGGIGIE  292 (321)
T ss_dssp             HHHHHHHGGGSCCCS-EEEESCSCCEEHHHHHHHHH-TTCTT-CEEEEECCCTTCCSBCCBCCHHHHHHHCCCSCCCCHH
T ss_pred             HHHHHHHHHhcCCCC-eEEecCCCcccHHHHHHHHH-HhCCC-CccccCCCCCCCcceeeccHHHHHHHhCCCCCcCCHH
Confidence            999999999998775 99974 67899999999999 88821 11100111113455678999999 7799999 77999


Q ss_pred             HHHHHHHHHHHHcCC
Q 020334          312 EMFDGAIKCCKERGY  326 (327)
Q Consensus       312 ~~l~~~~~~~~~~~~  326 (327)
                      ++|+++++||++++.
T Consensus       293 ~~l~~~~~~~~~~~~  307 (321)
T 3vps_A          293 EGIRLTLEWWQSRDL  307 (321)
T ss_dssp             HHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHhCCC
Confidence            999999999998763

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=5e-44  Score=315.73  Aligned_cols=301  Identities=16%  Similarity=0.150  Sum_probs=223.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC-cchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC--CCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH-KKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG--CAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~   81 (327)
                      ||+|||||||||||++++++|+++|++|++++|..... ......+..    ..+++++.+|++|++++.+++++  +|+
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   76 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS----LGNFEFVHGDIRNKNDVTRLITKYMPDS   76 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc----CCceEEEEcCCCCHHHHHHHHhccCCCE
Confidence            46899999999999999999999999999999832121 112222222    14689999999999999999987  999


Q ss_pred             EEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCcc-EEEEeccceeeeecCCCCCc----------------
Q 020334           82 VIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVK-RFVYTSSGSTVYFSGKDVDM----------------  142 (327)
Q Consensus        82 vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~v~~SS~~v~~~~~~~~~~----------------  142 (327)
                      |||+|+....  ...++. ..+++|+.++.++++++++.+ ++ +|||+||.++|+.  ....+                
T Consensus        77 vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~g~--~~~~~~~e~~~~~~~~~~~~~  152 (347)
T 1orr_A           77 CFHLAGQVAMTTSIDNPC-MDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGD--LEQYKYNETETRYTCVDKPNG  152 (347)
T ss_dssp             EEECCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTT--CTTSCEEECSSCEEETTCTTC
T ss_pred             EEECCcccChhhhhhCHH-HHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHhCC--CCcCCcccccccccccccccC
Confidence            9999997542  122344 789999999999999999987 65 9999999999862  22222                


Q ss_pred             ccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC-CchHHHHHHH-HhCC---
Q 020334          143 LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKF-AGSVRSTLAM-VLGN---  217 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~-~~~~~~~~~~-~~~~---  217 (327)
                      ++|+++         ..|.++|+.+|..+|.+++.++++++++++++||+.+|||...... ...+..++.. ..+.   
T Consensus       153 ~~e~~~---------~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (347)
T 1orr_A          153 YDESTQ---------LDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGI  223 (347)
T ss_dssp             BCTTSC---------CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTC
T ss_pred             ccccCC---------CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccC
Confidence            444443         2467889999999999999999888999999999999999764321 1233333322 2232   


Q ss_pred             --ccc-cccccC-CCeeeHHHHHHHHHHhhcCC--CCCceEEEecc---ccCHHHHHHHHHHhCCCC-CCCCCCCCcccc
Q 020334          218 --REE-YSILLN-ISMVHIDDVARAHIFLLEYP--DAKGRYICSSA---KLTIQEMAEFLSAKHPEY-PIPNVDSLSEIE  287 (327)
Q Consensus       218 --~~~-~~~~~~-~~~i~v~D~a~~~~~~~~~~--~~~~~y~~~~~---~~s~~e~~~~i~~~~~~~-~~~~~~~~~~~~  287 (327)
                        +.. ++.+.+ ++|+|++|+|++++.++++.  ..+++||+++.   ++|+.|+++.+.+.+|.. .+..  ......
T Consensus       224 ~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~--~~~~~~  301 (347)
T 1orr_A          224 NKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTN--LPVRES  301 (347)
T ss_dssp             CCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEE--ECCCSS
T ss_pred             CCCeEEecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCcee--CCCCCC
Confidence              222 222223 79999999999999999852  24558998653   499999999999988731 1111  001112


Q ss_pred             cccccccChHHH-HhccccccccHHHHHHHHHHHHHHc
Q 020334          288 GYKLSALSSKKL-LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       288 ~~~~~~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      ......+|++|+ +.|||+|+++++++|+++++|++++
T Consensus       302 ~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  339 (347)
T 1orr_A          302 DQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI  339 (347)
T ss_dssp             CCSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred             CcceeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHH
Confidence            334567899999 7899999889999999999999874

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=4e-44  Score=312.50  Aligned_cols=292  Identities=18%  Similarity=0.225  Sum_probs=223.3

Q ss_pred             eEEEeCCcchhHHHHHHHHHHC--CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEE
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDH--GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGV   82 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v   82 (327)
                      +|||||||||||++++++|+++  |++|++++|+.+ ..             .+++++.+|++|++++.++++  ++|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~-~~-------------~~~~~~~~D~~d~~~~~~~~~~~~~d~v   66 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQR-DT-------------GGIKFITLDVSNRDEIDRAVEKYSIDAI   66 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCC-CC-------------TTCCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCc-cc-------------cCceEEEecCCCHHHHHHHHhhcCCcEE
Confidence            5999999999999999999998  899999999432 21             145788999999999999987  89999


Q ss_pred             EEccCCCCCC-CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           83 IHVAAPIDID-GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        83 ih~a~~~~~~-~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      ||+|+..... ..++ ...+++|+.++.++++++++.+ +++|||+||..+|+.. ....+.+|+++         ..|.
T Consensus        67 ih~a~~~~~~~~~~~-~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~-~~~~~~~e~~~---------~~p~  134 (317)
T 3ajr_A           67 FHLAGILSAKGEKDP-ALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPE-TPKNKVPSITI---------TRPR  134 (317)
T ss_dssp             EECCCCCHHHHHHCH-HHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCTT-SCSSSBCSSSC---------CCCC
T ss_pred             EECCcccCCccccCh-HHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCCC-CCCCCcccccc---------CCCC
Confidence            9999865321 1233 3789999999999999999987 8899999999999632 23345667664         3567


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC--Cc-hHHHHHHHHhCCcccc-ccc-cCCCeeeHHHHH
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKF--AG-SVRSTLAMVLGNREEY-SIL-LNISMVHIDDVA  236 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~--~~-~~~~~~~~~~~~~~~~-~~~-~~~~~i~v~D~a  236 (327)
                      ++|+.+|..+|.+++.++++++++++++||+.+||+...+..  .. ....+.....+..... ... ..++|+|++|+|
T Consensus       135 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  214 (317)
T 3ajr_A          135 TMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDAL  214 (317)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHH
Confidence            899999999999999998888999999999999998643211  12 2233333344443322 222 237999999999


Q ss_pred             HHHHHhhcCCCC----CceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCcc-cccccccccChHHH-HhccccccccH
Q 020334          237 RAHIFLLEYPDA----KGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSE-IEGYKLSALSSKKL-LDICFTYKYGI  310 (327)
Q Consensus       237 ~~~~~~~~~~~~----~~~y~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~k~-~~lg~~p~~~~  310 (327)
                      ++++.+++++..    +++||++++.+|+.|+++.+.+.+|...++....... ........+|++|+ +.|||+|++++
T Consensus       215 ~a~~~~l~~~~~~~~~g~~~~i~~~~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~  294 (317)
T 3ajr_A          215 KALVDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIEYKEDFRDKIAATWPESLDSSEASNEWGFSIEYDL  294 (317)
T ss_dssp             HHHHHHHHCCGGGCSSCSCEECCSEEECHHHHHHHHHTTCCSCCEEECCCHHHHHHTTSCSCBCCHHHHHHHCCCCCCCH
T ss_pred             HHHHHHHhCCccccccCceEecCCccccHHHHHHHHHHHCCccccccccccchhhccccccccCHHHHHHHcCCCCCCCH
Confidence            999999987542    4799987778999999999999888433322111001 11223456899999 78999999999


Q ss_pred             HHHHHHHHHHHHHc
Q 020334          311 DEMFDGAIKCCKER  324 (327)
Q Consensus       311 ~~~l~~~~~~~~~~  324 (327)
                      +++|+++++|++++
T Consensus       295 ~~~l~~~~~~~~~~  308 (317)
T 3ajr_A          295 DRTIDDMIDHISEK  308 (317)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999999864

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=1.1e-44  Score=311.54  Aligned_cols=270  Identities=18%  Similarity=0.162  Sum_probs=213.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC-CCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG-CAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-~d~vi   83 (327)
                      +|+||||| +||||++|+++|+++|++|++++| ++...            ..+++++.+|+.|++++.+++++ +|+||
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r-~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vi   68 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRR-SAQPM------------PAGVQTLIADVTRPDTLASIVHLRPEILV   68 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEEC-TTSCC------------CTTCCEEECCTTCGGGCTTGGGGCCSEEE
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC-Ccccc------------ccCCceEEccCCChHHHHHhhcCCCCEEE
Confidence            57899999 599999999999999999999999 43221            25789999999999999988886 99999


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchh
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS  163 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  163 (327)
                      |+|+...   .++. ..+++|+.++.+++++|++.+ +++|||+||.++|+  .....+++|+++         ..|.++
T Consensus        69 h~a~~~~---~~~~-~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~vyg--~~~~~~~~E~~~---------~~p~~~  132 (286)
T 3gpi_A           69 YCVAASE---YSDE-HYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVYG--QEVEEWLDEDTP---------PIAKDF  132 (286)
T ss_dssp             ECHHHHH---HC------CCSHHHHHHHHHHTTTSC-CCEEEEEEEGGGCC--CCCSSEECTTSC---------CCCCSH
T ss_pred             EeCCCCC---CCHH-HHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccEEEc--CCCCCCCCCCCC---------CCCCCh
Confidence            9998643   2223 778899999999999999877 89999999999996  445678899886         356789


Q ss_pred             hHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC-CCeeeHHHHHHHHHHh
Q 020334          164 YVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN-ISMVHIDDVARAHIFL  242 (327)
Q Consensus       164 Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~~~~~~  242 (327)
                      |+.+|..+|.+ +.+     ++++++||+++|||+..    .    ++..+.. ......... ++|+|++|+|++++.+
T Consensus       133 Y~~sK~~~E~~-~~~-----~~~~ilR~~~v~G~~~~----~----~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~  197 (286)
T 3gpi_A          133 SGKRMLEAEAL-LAA-----YSSTILRFSGIYGPGRL----R----MIRQAQT-PEQWPARNAWTNRIHRDDGAAFIAYL  197 (286)
T ss_dssp             HHHHHHHHHHH-GGG-----SSEEEEEECEEEBTTBC----H----HHHHTTC-GGGSCSSBCEECEEEHHHHHHHHHHH
T ss_pred             hhHHHHHHHHH-Hhc-----CCeEEEecccccCCCch----h----HHHHHHh-cccCCCcCceeEEEEHHHHHHHHHHH
Confidence            99999999998 543     99999999999999753    1    2222222 222222223 7999999999999999


Q ss_pred             hcC---CCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHHHhccccccc-cHHHHHHHH
Q 020334          243 LEY---PDAKGRYICS-SAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKY-GIDEMFDGA  317 (327)
Q Consensus       243 ~~~---~~~~~~y~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~-~~~~~l~~~  317 (327)
                      +++   ...+++||++ ++.+|+.|+++.+++.+|.. .+.  ...+ .......+|++|++.|||+|++ +|+++|+++
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~-~~~--~~~~-~~~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~  273 (286)
T 3gpi_A          198 IQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIA-YPA--GATP-PVQGNKKLSNARLLASGYQLIYPDYVSGYGAL  273 (286)
T ss_dssp             HHHHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTCC-CCC--SCCC-CBCSSCEECCHHHHHTTCCCSSCSHHHHHHHH
T ss_pred             HhhhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCCC-CCC--CCCc-ccCCCeEeeHHHHHHcCCCCcCCcHHHHHHHH
Confidence            988   4567899975 67899999999999999832 121  1111 3455678999999999999999 699999999


Q ss_pred             HHHHHH
Q 020334          318 IKCCKE  323 (327)
Q Consensus       318 ~~~~~~  323 (327)
                      ++|+..
T Consensus       274 ~~~~~~  279 (286)
T 3gpi_A          274 LAAMRE  279 (286)
T ss_dssp             HHHHTC
T ss_pred             HHHHhc
Confidence            999864

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=1.2e-43  Score=318.98  Aligned_cols=308  Identities=19%  Similarity=0.226  Sum_probs=227.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHH-HCCCeEEEEEcCCCCC--------cchhhh-hhCCCCC--CCC---eEEEeCCCCCh
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLL-DHGYFVTTTVRSDPEH--------KKDLSF-LTNLPGA--SER---LQIFNADLNDP   69 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~--------~~~~~~-~~~~~~~--~~~---~~~~~~D~~d~   69 (327)
                      +|+|||||||||||++++++|+ ++|++|++++|+....        ...+.. +......  ..+   ++++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3589999999999999999999 9999999999943321        122211 1111000  124   89999999999


Q ss_pred             hHHHHHhc--C-CCEEEEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCC-----C
Q 020334           70 ESFDAAIA--G-CAGVIHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGK-----D  139 (327)
Q Consensus        70 ~~~~~~~~--~-~d~vih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~-----~  139 (327)
                      +++.++++  + +|+|||||+.....  ..++. ..+++|+.++.+++++|++.+ +++|||+||.++|+....     .
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~g~~~~~~~~~~  159 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPL-KYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTN  159 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----C
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhHH-HHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHhCCCCccccccc
Confidence            99999887  6 99999999975421  22333 789999999999999999887 889999999999863210     1


Q ss_pred             CCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC-------CCchHHHHH-
Q 020334          140 VDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK-------FAGSVRSTL-  211 (327)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~-------~~~~~~~~~-  211 (327)
                      ..+++|+++         ..|.++|+.+|..+|.+++.++++++++++++||+++|||+....       ....+..+. 
T Consensus       160 ~~~~~E~~~---------~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~  230 (397)
T 1gy8_A          160 AEPIDINAK---------KSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILG  230 (397)
T ss_dssp             CCCBCTTSC---------CBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHH
T ss_pred             ccCcCccCC---------CCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHH
Confidence            467888875         255678999999999999999988899999999999999974311       123344333 


Q ss_pred             ----HHHhCCc------------cccc-------cccC-CCeeeHHHHHHHHHHhhcCCC-C-----C---ceEEE-ecc
Q 020334          212 ----AMVLGNR------------EEYS-------ILLN-ISMVHIDDVARAHIFLLEYPD-A-----K---GRYIC-SSA  257 (327)
Q Consensus       212 ----~~~~~~~------------~~~~-------~~~~-~~~i~v~D~a~~~~~~~~~~~-~-----~---~~y~~-~~~  257 (327)
                          ....+..            ..+.       .+.+ ++|+|++|+|++++.+++++. .     +   ++||+ +++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~  310 (397)
T 1gy8_A          231 RVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSR  310 (397)
T ss_dssp             HHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSC
T ss_pred             HHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCC
Confidence                2223321            2111       1222 799999999999999987642 2     2   78997 567


Q ss_pred             ccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHH-Hhccccccc-cHHHHHHHHHHHHHHc
Q 020334          258 KLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL-LDICFTYKY-GIDEMFDGAIKCCKER  324 (327)
Q Consensus       258 ~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p~~-~~~~~l~~~~~~~~~~  324 (327)
                      .+|+.|+++.+.+.+|. +.+...............+|++|+ +.|||+|++ +++++|+++++|++++
T Consensus       311 ~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~  378 (397)
T 1gy8_A          311 GYSVREVIEVARKTTGH-PIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (397)
T ss_dssp             CEEHHHHHHHHHHHHCC-CCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             cccHHHHHHHHHHHhCC-CCCeeeCCCCCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhc
Confidence            89999999999998873 222100001112344678999999 889999999 9999999999999875

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=6.7e-43  Score=308.05  Aligned_cols=299  Identities=17%  Similarity=0.195  Sum_probs=224.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +|+|||||||||||++++++|+++|++|++++|........+..+..    ..+++++.+|+.+..     +.++|+|||
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~-----~~~~d~vih   97 (343)
T 2b69_A           27 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG----HENFELINHDVVEPL-----YIEVDQIYH   97 (343)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTT----CTTEEEEECCTTSCC-----CCCCSEEEE
T ss_pred             CCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhcc----CCceEEEeCccCChh-----hcCCCEEEE
Confidence            67899999999999999999999999999999943322222222211    247899999998863     568999999


Q ss_pred             ccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           85 VAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        85 ~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      ||+....  ...++. ..+++|+.++.+++++|++.+ + +|||+||.++|+  .....+++|+++.....    ..|.+
T Consensus        98 ~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g--~~~~~~~~E~~~~~~~~----~~~~~  168 (343)
T 2b69_A           98 LASPASPPNYMYNPI-KTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYG--DPEVHPQSEDYWGHVNP----IGPRA  168 (343)
T ss_dssp             CCSCCSHHHHTTCHH-HHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGB--SCSSSSBCTTCCCBCCS----SSTTH
T ss_pred             CccccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHhC--CCCCCCCcccccccCCC----CCCCC
Confidence            9997542  123444 789999999999999999987 5 999999999986  33456778875432111    24567


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHH-HhCCcccc-ccccC-CCeeeHHHHHHHH
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAM-VLGNREEY-SILLN-ISMVHIDDVARAH  239 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~-~~~i~v~D~a~~~  239 (327)
                      +|+.+|..+|.+++.++++.+++++++||+.+|||+........+..++.. ..+....+ ..+.+ ++|+|++|+|+++
T Consensus       169 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~  248 (343)
T 2b69_A          169 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL  248 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHH
Confidence            899999999999999988889999999999999998654323344444333 34544332 22223 7999999999999


Q ss_pred             HHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCC-CCCCCCCCcccccccccccChHHH-HhccccccccHHHHHHH
Q 020334          240 IFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEY-PIPNVDSLSEIEGYKLSALSSKKL-LDICFTYKYGIDEMFDG  316 (327)
Q Consensus       240 ~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p~~~~~~~l~~  316 (327)
                      +.+++.+ .+++||+ +++.+|+.|+++.+++.+|.. .+..  ............+|++|+ +.|||+|+++++++|++
T Consensus       249 ~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~--~p~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~  325 (343)
T 2b69_A          249 VALMNSN-VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQF--LSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNK  325 (343)
T ss_dssp             HHHHTSS-CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEE--ECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHH
T ss_pred             HHHHhcC-CCCeEEecCCCCCcHHHHHHHHHHHhCCCCCcee--CCCCCCCCceecCCHHHHHHHcCCCCCCCHHHHHHH
Confidence            9999875 3678997 457899999999999988731 1111  000012234567899999 78999998899999999


Q ss_pred             HHHHHHHc
Q 020334          317 AIKCCKER  324 (327)
Q Consensus       317 ~~~~~~~~  324 (327)
                      +++|++++
T Consensus       326 ~~~~~~~~  333 (343)
T 2b69_A          326 AIHYFRKE  333 (343)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999864

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=2.8e-43  Score=312.60  Aligned_cols=302  Identities=16%  Similarity=0.160  Sum_probs=226.7

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCC-CCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDP-EHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAG   81 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~   81 (327)
                      |+|||||||||||++++++|++. |++|++++|+.. .....+..+..    ..+++++.+|++|++++.++++  ++|+
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   76 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISE----SNRYNFEHADICDSAEITRIFEQYQPDA   76 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTT----CTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhc----CCCeEEEECCCCCHHHHHHHHhhcCCCE
Confidence            36999999999999999999998 799999999432 22222222211    2578999999999999999997  8999


Q ss_pred             EEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhc--CCcc-------EEEEeccceeeeecCCCCC--------c
Q 020334           82 VIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKS--GTVK-------RFVYTSSGSTVYFSGKDVD--------M  142 (327)
Q Consensus        82 vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~-------~~v~~SS~~v~~~~~~~~~--------~  142 (327)
                      |||||+....  ...++. +.+++|+.++.++++++++.  + ++       +|||+||.++|+.......        +
T Consensus        77 vih~A~~~~~~~~~~~~~-~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~  154 (361)
T 1kew_A           77 VMHLAAESHVDRSITGPA-AFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPL  154 (361)
T ss_dssp             EEECCSCCCHHHHHHCTH-HHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCC
T ss_pred             EEECCCCcChhhhhhCHH-HHHHHHHHHHHHHHHHHHHhccC-cccccccCceEEEeCCHHHhCCCcccccccccccCCC
Confidence            9999997542  122344 78999999999999999987  6 66       9999999999863221111        6


Q ss_pred             ccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHH-HhCCcccc
Q 020334          143 LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAM-VLGNREEY  221 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~  221 (327)
                      ++|+++         ..|.++|+.+|..+|.+++.++++++++++++||+.+|||....  ...+..++.. ..+....+
T Consensus       155 ~~E~~~---------~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~  223 (361)
T 1kew_A          155 FTETTA---------YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP--EKLIPLVILNALEGKPLPI  223 (361)
T ss_dssp             BCTTSC---------CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT--TSHHHHHHHHHHHTCCEEE
T ss_pred             CCCCCC---------CCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCc--ccHHHHHHHHHHcCCCceE
Confidence            777765         35677899999999999999998889999999999999998543  2333333333 34444333


Q ss_pred             -ccccC-CCeeeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCC-CCC--CCCCCC---c-ccccccc
Q 020334          222 -SILLN-ISMVHIDDVARAHIFLLEYPDAKGRYICS-SAKLTIQEMAEFLSAKHPE-YPI--PNVDSL---S-EIEGYKL  291 (327)
Q Consensus       222 -~~~~~-~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~e~~~~i~~~~~~-~~~--~~~~~~---~-~~~~~~~  291 (327)
                       ..+.+ ++++|++|+|++++.+++.+..+++||++ ++.+|+.|+++.+++.++. .+.  |.....   . .......
T Consensus       224 ~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~  303 (361)
T 1kew_A          224 YGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRR  303 (361)
T ss_dssp             ETTSCCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCB
T ss_pred             cCCCceeEeeEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecCCCCcccce
Confidence             22223 79999999999999999876666799975 5679999999999987762 111  100000   0 0012234


Q ss_pred             cccChHHH-HhccccccccHHHHHHHHHHHHHHc
Q 020334          292 SALSSKKL-LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       292 ~~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      +.+|++|+ +.|||+|+++++++|+++++|++++
T Consensus       304 ~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  337 (361)
T 1kew_A          304 YAIDAGKISRELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             CCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             eecCHHHHHHHhCCCCccCHHHHHHHHHHHHHhc
Confidence            67899999 7799999999999999999999864

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=4.6e-43  Score=309.29  Aligned_cols=305  Identities=17%  Similarity=0.196  Sum_probs=225.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh-hHHHHHhcCCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP-ESFDAAIAGCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~d~vi   83 (327)
                      |+|||||||||||++++++|+++ |++|++++| ++.....   +..    ..+++++.+|++|. +.+.++++++|+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~~~---~~~----~~~~~~~~~D~~~~~~~~~~~~~~~d~vi   72 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISR---FLN----HPHFHFVEGDISIHSEWIEYHVKKCDVVL   72 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEES-CCGGGGG---GTT----CTTEEEEECCTTTCSHHHHHHHHHCSEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeC-CcchHHH---hhc----CCCeEEEeccccCcHHHHHhhccCCCEEE
Confidence            47999999999999999999998 899999999 4332221   111    25789999999984 56888888999999


Q ss_pred             EccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           84 HVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        84 h~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      |||+.....  ..++. +.+++|+.++.++++++++.+  ++|||+||.++|+  .....+++|+++...  ..+...|.
T Consensus        73 h~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~g--~~~~~~~~e~~~~~~--~~~~~~~~  145 (345)
T 2bll_A           73 PLVAIATPIEYTRNPL-RVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYG--MCSDKYFDEDHSNLI--VGPVNKPR  145 (345)
T ss_dssp             ECBCCCCHHHHHHSHH-HHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGB--TCCCSSBCTTTCCCB--CCCTTCGG
T ss_pred             EcccccCccchhcCHH-HHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHcC--CCCCCCcCCcccccc--cCcccCcc
Confidence            999965421  12333 788999999999999999876  7999999999996  334556788765210  00112456


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC------CchHHHHHH-HHhCCcccccc-ccC-CCeeeH
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKF------AGSVRSTLA-MVLGNREEYSI-LLN-ISMVHI  232 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~------~~~~~~~~~-~~~~~~~~~~~-~~~-~~~i~v  232 (327)
                      +.|+.+|..+|.+++.++++++++++++||+.+|||+.....      ...+..++. ...+....+.. +.+ ++|+|+
T Consensus       146 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  225 (345)
T 2bll_A          146 WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI  225 (345)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEH
T ss_pred             cccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEH
Confidence            689999999999999998888999999999999999864311      123333333 33455443332 223 799999


Q ss_pred             HHHHHHHHHhhcCCC---CCceEEEec-c-ccCHHHHHHHHHHhCCCC----CCCCCCCC-----cc-----cccccccc
Q 020334          233 DDVARAHIFLLEYPD---AKGRYICSS-A-KLTIQEMAEFLSAKHPEY----PIPNVDSL-----SE-----IEGYKLSA  293 (327)
Q Consensus       233 ~D~a~~~~~~~~~~~---~~~~y~~~~-~-~~s~~e~~~~i~~~~~~~----~~~~~~~~-----~~-----~~~~~~~~  293 (327)
                      +|+|++++.+++++.   .+++||+++ + .+|+.|+++.+++.++..    ..|.....     ..     ........
T Consensus       226 ~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (345)
T 2bll_A          226 RDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRK  305 (345)
T ss_dssp             HHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCC
T ss_pred             HHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhc
Confidence            999999999998763   456899765 4 799999999999977622    11211000     00     01234567


Q ss_pred             cChHHH-HhccccccccHHHHHHHHHHHHHHcC
Q 020334          294 LSSKKL-LDICFTYKYGIDEMFDGAIKCCKERG  325 (327)
Q Consensus       294 ~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~~  325 (327)
                      +|++|+ ++|||+|+++++++|+++++|++++.
T Consensus       306 ~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~  338 (345)
T 2bll_A          306 PSIRNAHRCLDWEPKIDMQETIDETLDFFLRTV  338 (345)
T ss_dssp             BCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHS
T ss_pred             ccHHHHHHhcCCCccccHHHHHHHHHHHHHHcC
Confidence            899999 78999999999999999999998754

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=1.5e-43  Score=309.46  Aligned_cols=286  Identities=15%  Similarity=0.140  Sum_probs=220.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v   82 (327)
                      +|+|||||||||||++++++|+++|++|++++| ..                      .+|+.|.+++.++++  ++|+|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r-~~----------------------~~D~~d~~~~~~~~~~~~~d~v   59 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRT-RD----------------------ELNLLDSRAVHDFFASERIDQV   59 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCC-TT----------------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEec-Cc----------------------cCCccCHHHHHHHHHhcCCCEE
Confidence            578999999999999999999999999998877 21                      279999999999998  89999


Q ss_pred             EEccCCCCC---CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           83 IHVAAPIDI---DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        83 ih~a~~~~~---~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      ||+|+....   ...++. +.+++|+.++.++++++++.+ +++|||+||..+|+  .....+++|+++...     ...
T Consensus        60 ih~a~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vyg--~~~~~~~~E~~~~~~-----~~~  130 (321)
T 1e6u_A           60 YLAAAKVGGIVANNTYPA-DFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYP--KLAKQPMAESELLQG-----TLE  130 (321)
T ss_dssp             EECCCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSC--TTCCSSBCGGGTTSS-----CCC
T ss_pred             EEcCeecCCcchhhhCHH-HHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHcC--CCCCCCcCccccccC-----CCC
Confidence            999997542   122333 789999999999999999987 88999999999996  334567888763210     023


Q ss_pred             C-chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC--CchHHHHHHHHh-----C-Ccccc-ccccC-CC
Q 020334          160 W-GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKF--AGSVRSTLAMVL-----G-NREEY-SILLN-IS  228 (327)
Q Consensus       160 ~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~--~~~~~~~~~~~~-----~-~~~~~-~~~~~-~~  228 (327)
                      | .++|+.+|..+|.+++.++++++++++++||+.+|||+.....  ...+..++....     + .+..+ ..+.. ++
T Consensus       131 p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~  210 (321)
T 1e6u_A          131 PTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMRE  210 (321)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEEC
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEE
Confidence            3 3589999999999999998888999999999999999865321  234444443322     2 23332 22223 79


Q ss_pred             eeeHHHHHHHHHHhhcCCCC---------CceEEE-eccccCHHHHHHHHHHhCCC-CCCCCCCCCcccccccccccChH
Q 020334          229 MVHIDDVARAHIFLLEYPDA---------KGRYIC-SSAKLTIQEMAEFLSAKHPE-YPIPNVDSLSEIEGYKLSALSSK  297 (327)
Q Consensus       229 ~i~v~D~a~~~~~~~~~~~~---------~~~y~~-~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~  297 (327)
                      |+|++|+|++++.+++++..         +++||+ +++.+|+.|+++.+.+.+|. ..+..  ...+........+|++
T Consensus       211 ~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~--~~~~~~~~~~~~~d~~  288 (321)
T 1e6u_A          211 FLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVF--DASKPDGTPRKLLDVT  288 (321)
T ss_dssp             EEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEE--ETTSCCCCSBCCBCCH
T ss_pred             eEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEe--CCCCCCCcccccCCHH
Confidence            99999999999999987654         479997 56789999999999998872 11111  0001122445789999


Q ss_pred             HHHhccccccccHHHHHHHHHHHHHHc
Q 020334          298 KLLDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       298 k~~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      |++.|||+|+++++++|+++++|++++
T Consensus       289 k~~~lG~~p~~~~~~~l~~~~~~~~~~  315 (321)
T 1e6u_A          289 RLHQLGWYHEISLEAGLASTYQWFLEN  315 (321)
T ss_dssp             HHHHTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHhcCCccCCcHHHHHHHHHHHHHHH
Confidence            993399999999999999999999865

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=5e-43  Score=308.24  Aligned_cols=304  Identities=17%  Similarity=0.190  Sum_probs=223.4

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi   83 (327)
                      |+|||||||||||++++++|+++|++|++++|...........+....  ..++.++.+|++|++++.++++  ++|+||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi   78 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc--CCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence            479999999999999999999999999999873322222222221100  1367899999999999988886  599999


Q ss_pred             EccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           84 HVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        84 h~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      ||||....  ....+. +.+++|+.++.++++++++.+ +++|||+||.++|+  .....+++|+++.        .++.
T Consensus        79 h~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g--~~~~~~~~e~~~~--------~~~~  146 (338)
T 1udb_A           79 HFAGLKAVGESVQKPL-EYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYG--DNPKIPYVESFPT--------GTPQ  146 (338)
T ss_dssp             ECCSCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGC--SCCSSSBCTTSCC--------CCCS
T ss_pred             ECCccCccccchhcHH-HHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHhC--CCCCCCcCcccCC--------CCCC
Confidence            99996542  112333 789999999999999999887 88999999999986  3345677887642        1236


Q ss_pred             hhhHhhhHHHHHHHHHHHHHc-CCcEEEEecCceecCCCCC------C--CCchHHHHHHHHhCCccccc---------c
Q 020334          162 KSYVLTKTLTERAALEFAEEH-GLDLVTLIPSFVVGPFICP------K--FAGSVRSTLAMVLGNREEYS---------I  223 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~R~~~v~G~~~~~------~--~~~~~~~~~~~~~~~~~~~~---------~  223 (327)
                      ++|+.+|..+|.+++.++++. +++++++||+++|||....      .  ....+..+.....+....+.         .
T Consensus       147 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  226 (338)
T 1udb_A          147 SPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTED  226 (338)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSS
T ss_pred             ChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCC
Confidence            789999999999999998876 8999999999999985311      1  12234444444333221111         1


Q ss_pred             ccC-CCeeeHHHHHHHHHHhhcCC--CCC-ceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHH
Q 020334          224 LLN-ISMVHIDDVARAHIFLLEYP--DAK-GRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKK  298 (327)
Q Consensus       224 ~~~-~~~i~v~D~a~~~~~~~~~~--~~~-~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k  298 (327)
                      +.+ ++|+|++|+|++++.++++.  ..+ ++||+ +++.+|+.|+++.+++.++. +++...............+|++|
T Consensus       227 g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k  305 (338)
T 1udb_A          227 GTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGK-PVNYHFAPRREGDLPAYWADASK  305 (338)
T ss_dssp             SSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTS-CCCEEEECCCTTCCSBCCBCCHH
T ss_pred             CceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCC-CCcceeCCCCCCchhhhhcCHHH
Confidence            223 79999999999999998753  233 58997 56789999999999998872 22210011111233456789999


Q ss_pred             H-HhccccccccHHHHHHHHHHHHHHc
Q 020334          299 L-LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       299 ~-~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      + +.|||+|+++++++|+++++|++++
T Consensus       306 ~~~~lG~~p~~~l~~~l~~~~~w~~~~  332 (338)
T 1udb_A          306 ADRELNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_dssp             HHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             HHHHcCCCcCCCHHHHHHHHHHHHHhc
Confidence            9 8899999999999999999999875

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=8.8e-43  Score=305.63  Aligned_cols=292  Identities=18%  Similarity=0.172  Sum_probs=220.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~   81 (327)
                      .+|+|||||||||||++++++|+++|++|++++|+..........       ..+++++.+|++|++++.++++  ++|+
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------l~~v~~~~~Dl~d~~~~~~~~~~~~~D~   91 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPP-------VAGLSVIEGSVTDAGLLERAFDSFKPTH   91 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCS-------CTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhc-------cCCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence            357899999999999999999999999999999943322211111       1478999999999999999998  9999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      ||||||..... .....+ +++|+.++.++++++++.+ +++|||+||.++|+.......+++|++           .|.
T Consensus        92 vih~A~~~~~~-~~~~~~-~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~E~~-----------~~~  157 (330)
T 2pzm_A           92 VVHSAAAYKDP-DDWAED-AATNVQGSINVAKAASKAG-VKRLLNFQTALCYGRPATVPIPIDSPT-----------APF  157 (330)
T ss_dssp             EEECCCCCSCT-TCHHHH-HHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGGCSCSSSSBCTTCCC-----------CCC
T ss_pred             EEECCccCCCc-cccChh-HHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCccCCCCcCCCC-----------CCC
Confidence            99999976542 222224 8999999999999999887 889999999999852211112677775           235


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHH-HHH
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVAR-AHI  240 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~-~~~  240 (327)
                      ++|+.+|..+|.+++.+    +++++++||+++|||+..   ...+..+..........+.....++++|++|+|+ +++
T Consensus       158 ~~Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~a~~  230 (330)
T 2pzm_A          158 TSYGISKTAGEAFLMMS----DVPVVSLRLANVTGPRLA---IGPIPTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIADL  230 (330)
T ss_dssp             SHHHHHHHHHHHHHHTC----SSCEEEEEECEEECTTCC---SSHHHHHHHHHHTTCCCCEESCEECEEEHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCCC---CCHHHHHHHHHHcCCEEeCCCCEecceeHHHHHHHHHH
Confidence            68999999999998765    799999999999999852   2334333333322222222211468999999999 999


Q ss_pred             HhhcCCCCCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHH-----HhccccccccHHHHH
Q 020334          241 FLLEYPDAKGRYICS-SAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL-----LDICFTYKYGIDEMF  314 (327)
Q Consensus       241 ~~~~~~~~~~~y~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-----~~lg~~p~~~~~~~l  314 (327)
                      .+++++. +++||++ ++.+|+.|+++.+++.+|...+..   .+.........+|++|+     +.|||+|+++++++|
T Consensus       231 ~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~---~~~~~~~~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l  306 (330)
T 2pzm_A          231 SLQEGRP-TGVFNVSTGEGHSIKEVFDVVLDYVGATLAEP---VPVVAPGADDVPSVVLDPSKTETEFGWKAKVDFKDTI  306 (330)
T ss_dssp             HTSTTCC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCSSC---CCEECCCTTSCSEECBCCHHHHHHHCCCCCCCHHHHH
T ss_pred             HHhhcCC-CCEEEeCCCCCCCHHHHHHHHHHHhCCCCcee---CCCCcchhhccCCHHHHhhchHHHcCCcccCCHHHHH
Confidence            9998866 7799975 578999999999999888432211   11111233455666666     779999988999999


Q ss_pred             HHHHHHHHHcCCC
Q 020334          315 DGAIKCCKERGYL  327 (327)
Q Consensus       315 ~~~~~~~~~~~~~  327 (327)
                      +++++|+++.+++
T Consensus       307 ~~~~~~~~~~~~~  319 (330)
T 2pzm_A          307 TGQLAWYDKYGVT  319 (330)
T ss_dssp             HHHHHHHHHHCSC
T ss_pred             HHHHHHHHhhCcc
Confidence            9999999998875

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.3e-43  Score=311.48  Aligned_cols=307  Identities=18%  Similarity=0.150  Sum_probs=227.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC-cchhhhhhCCCC--CCCCeEEEeCCCCChhHHHHHhcC--
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH-KKDLSFLTNLPG--ASERLQIFNADLNDPESFDAAIAG--   78 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~--   78 (327)
                      |||+|||||||||||++++++|+++|++|++++|+.... ...+..+.....  ...+++++.+|++|++++.+++++  
T Consensus        23 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  102 (375)
T 1t2a_A           23 MRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK  102 (375)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred             cCcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcC
Confidence            347899999999999999999999999999999943321 112222211000  124789999999999999998874  


Q ss_pred             CCEEEEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCc---cEEEEeccceeeeecCCCCCcccCCCCCChhH
Q 020334           79 CAGVIHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTV---KRFVYTSSGSTVYFSGKDVDMLDETFWSDEDY  153 (327)
Q Consensus        79 ~d~vih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~---~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~  153 (327)
                      +|+|||||+.....  ..++. ..+++|+.++.++++++++.+ +   ++|||+||.++|+  .....+++|+++     
T Consensus       103 ~d~vih~A~~~~~~~~~~~~~-~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~~~--~~~~~~~~E~~~-----  173 (375)
T 1t2a_A          103 PTEIYNLGAQSHVKISFDLAE-YTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYG--KVQEIPQKETTP-----  173 (375)
T ss_dssp             CSEEEECCSCCCHHHHHHSHH-HHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTC--SCSSSSBCTTSC-----
T ss_pred             CCEEEECCCcccccccccCHH-HHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhhhC--CCCCCCCCccCC-----
Confidence            79999999975421  22343 789999999999999999887 5   7999999999986  334567888875     


Q ss_pred             hhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC-chHHHHHHH-HhCCcc--ccccccC-CC
Q 020334          154 IRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA-GSVRSTLAM-VLGNRE--EYSILLN-IS  228 (327)
Q Consensus       154 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~-~~~~~~~~~-~~~~~~--~~~~~~~-~~  228 (327)
                          ..|.++|+.+|..+|.+++.++++++++++++||+++|||+....+. ..+..++.. ..+...  .++.+.+ ++
T Consensus       174 ----~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~  249 (375)
T 1t2a_A          174 ----FYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRD  249 (375)
T ss_dssp             ----CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEEC
T ss_pred             ----CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceee
Confidence                24567899999999999999998889999999999999997543221 112222222 334332  2232223 79


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCC-C-----CCCC----------CCCc----ccc
Q 020334          229 MVHIDDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEY-P-----IPNV----------DSLS----EIE  287 (327)
Q Consensus       229 ~i~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~-~-----~~~~----------~~~~----~~~  287 (327)
                      |+|++|+|++++.+++++. +++||+ +++.+|+.|+++.+++.+|.. .     +|.+          ....    ...
T Consensus       250 ~i~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  328 (375)
T 1t2a_A          250 WGHAKDYVEAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPT  328 (375)
T ss_dssp             CEEHHHHHHHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSS
T ss_pred             eEEHHHHHHHHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcc
Confidence            9999999999999998765 478986 567899999999999988831 1     1110          0000    011


Q ss_pred             cccccccChHHH-HhccccccccHHHHHHHHHHHHHHc
Q 020334          288 GYKLSALSSKKL-LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       288 ~~~~~~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      ......+|++|+ +.|||+|+++++++|+++++|+++.
T Consensus       329 ~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  366 (375)
T 1t2a_A          329 EVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVEL  366 (375)
T ss_dssp             CCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             cchhhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHh
Confidence            233467899999 7899999999999999999999864

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-43  Score=304.56  Aligned_cols=273  Identities=17%  Similarity=0.097  Sum_probs=216.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~   81 (327)
                      |+|+|||||||||||++++++|+++|++|++++| .                       .+|+.|++.+.++++  ++|+
T Consensus         4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~-----------------------~~D~~d~~~~~~~~~~~~~d~   59 (287)
T 3sc6_A            4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDK-K-----------------------LLDITNISQVQQVVQEIRPHI   59 (287)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECT-T-----------------------TSCTTCHHHHHHHHHHHCCSE
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEecc-c-----------------------ccCCCCHHHHHHHHHhcCCCE
Confidence            3359999999999999999999999999999998 1                       189999999999988  6999


Q ss_pred             EEEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           82 VIHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        82 vih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |||+|+.....  ..++. ..+++|+.++.++++++++.+ + +|||+||.++|+  .....+++|+++         ..
T Consensus        60 vi~~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy~--~~~~~~~~E~~~---------~~  125 (287)
T 3sc6_A           60 IIHCAAYTKVDQAEKERD-LAYVINAIGARNVAVASQLVG-A-KLVYISTDYVFQ--GDRPEGYDEFHN---------PA  125 (287)
T ss_dssp             EEECCCCCCHHHHTTCHH-HHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSC--CCCSSCBCTTSC---------CC
T ss_pred             EEECCcccChHHHhcCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhcC--CCCCCCCCCCCC---------CC
Confidence            99999976522  23444 889999999999999999988 5 799999999995  445678999886         36


Q ss_pred             CchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHh-CCccccccccCCCeeeHHHHHHH
Q 020334          160 WGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVL-GNREEYSILLNISMVHIDDVARA  238 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~  238 (327)
                      |.++|+.+|..+|.+++.++    .+++++||+.+|||+..    ..+..+..... +..........++|+|++|+|++
T Consensus       126 p~~~Y~~sK~~~E~~~~~~~----~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  197 (287)
T 3sc6_A          126 PINIYGASKYAGEQFVKELH----NKYFIVRTSWLYGKYGN----NFVKTMIRLGKEREEISVVADQIGSPTYVADLNVM  197 (287)
T ss_dssp             CCSHHHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSC----CHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHhC----CCcEEEeeeeecCCCCC----cHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHH
Confidence            67899999999999998764    47899999999999743    34444444443 33333333333899999999999


Q ss_pred             HHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCC-CCCCCCC---CcccccccccccChHHHHhccccccccHHHH
Q 020334          239 HIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEY-PIPNVDS---LSEIEGYKLSALSSKKLLDICFTYKYGIDEM  313 (327)
Q Consensus       239 ~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~-~~~~~~~---~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~  313 (327)
                      ++.+++++. +++||+ +++.+|+.|+++.+++.+|.. .+.....   ...........+|++|++.|||.|.++++++
T Consensus       198 ~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~  276 (287)
T 3sc6_A          198 INKLIHTSL-YGTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEG  276 (287)
T ss_dssp             HHHHHTSCC-CEEEECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHH
T ss_pred             HHHHHhCCC-CCeEEEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCcccccHHHHHhhCCCCCccHHHH
Confidence            999999877 789996 567899999999999988831 1110000   0111334567899999999999999999999


Q ss_pred             HHHHHHHHHH
Q 020334          314 FDGAIKCCKE  323 (327)
Q Consensus       314 l~~~~~~~~~  323 (327)
                      |+++++|+++
T Consensus       277 l~~~~~~~~~  286 (287)
T 3sc6_A          277 LERFFIETKS  286 (287)
T ss_dssp             HHHHHHHTC-
T ss_pred             HHHHHHHHhc
Confidence            9999999865

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=9.6e-43  Score=313.76  Aligned_cols=311  Identities=14%  Similarity=0.132  Sum_probs=223.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-----------------hhhhhhCCCCCCCCeEEEeCCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-----------------DLSFLTNLPGASERLQIFNADLN   67 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~D~~   67 (327)
                      +++|||||||||||++++++|+++|++|++++|. .....                 .+..+...  ...+++++.+|++
T Consensus        11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~v~~~~~Dl~   87 (404)
T 1i24_A           11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNL-VRRLFDHQLGLESLTPIASIHDRISRWKAL--TGKSIELYVGDIC   87 (404)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC-HHHHHHHHHTCCCSSCCCCHHHHHHHHHHH--HCCCCEEEESCTT
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEec-CccccccccccccccccchhhhhhhhHhhc--cCCceEEEECCCC
Confidence            6789999999999999999999999999999983 21110                 11110000  0247899999999


Q ss_pred             ChhHHHHHhcC--CCEEEEccCCCCCC--CCchH--HHHHHHHHhHHHHHHHHHHhcCCc-cEEEEeccceeeeecCCCC
Q 020334           68 DPESFDAAIAG--CAGVIHVAAPIDID--GKETE--EVMTQRAVNGTIGILKSCLKSGTV-KRFVYTSSGSTVYFSGKDV  140 (327)
Q Consensus        68 d~~~~~~~~~~--~d~vih~a~~~~~~--~~~~~--~~~~~~nv~~~~~l~~~~~~~~~~-~~~v~~SS~~v~~~~~~~~  140 (327)
                      |++++.+++++  +|+|||+||.....  ..++.  ...+++|+.++.++++++++.+ . ++|||+||.++|+..   .
T Consensus        88 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vyg~~---~  163 (404)
T 1i24_A           88 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTP---N  163 (404)
T ss_dssp             SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCC---S
T ss_pred             CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHhCCC---C
Confidence            99999998886  99999999975421  11222  2478999999999999999887 5 599999999998632   2


Q ss_pred             CcccCCCCCChh-----HhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC-------------
Q 020334          141 DMLDETFWSDED-----YIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK-------------  202 (327)
Q Consensus       141 ~~~~E~~~~~~~-----~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~-------------  202 (327)
                      .+++|+.+....     .......|.++|+.+|..+|.+++.++++++++++++||+.||||+....             
T Consensus       164 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~  243 (404)
T 1i24_A          164 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYD  243 (404)
T ss_dssp             SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCS
T ss_pred             CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccc
Confidence            456665221000     00001355778999999999999999888899999999999999976421             


Q ss_pred             --CCchHHHHHHH-HhCCcccc-ccccC-CCeeeHHHHHHHHHHhhcCCCC-C--ceEEEeccccCHHHHHHHHHHh---
Q 020334          203 --FAGSVRSTLAM-VLGNREEY-SILLN-ISMVHIDDVARAHIFLLEYPDA-K--GRYICSSAKLTIQEMAEFLSAK---  271 (327)
Q Consensus       203 --~~~~~~~~~~~-~~~~~~~~-~~~~~-~~~i~v~D~a~~~~~~~~~~~~-~--~~y~~~~~~~s~~e~~~~i~~~---  271 (327)
                        ....+..++.. ..+....+ +.+.+ ++|+|++|+|++++.+++++.. +  ++||++++++|+.|+++.+++.   
T Consensus       244 ~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~~~~i~~~~~~  323 (404)
T 1i24_A          244 AVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSK  323 (404)
T ss_dssp             TTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHT
T ss_pred             cchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCcHHHHHHHHHHHHHh
Confidence              02334444433 34444433 33333 7999999999999999988654 4  4899866889999999999987   


Q ss_pred             CCCCCCCCCCCCccc--ccccccccChHHHHhccccccccHHHHHHHHHHHHHH
Q 020334          272 HPEYPIPNVDSLSEI--EGYKLSALSSKKLLDICFTYKYGIDEMFDGAIKCCKE  323 (327)
Q Consensus       272 ~~~~~~~~~~~~~~~--~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~  323 (327)
                      +|. +++........  .......+|++|+++|||+|+++++++++++++|++.
T Consensus       324 ~g~-~~~~~~~p~~~~~~~~~~~~~d~~k~~~LG~~p~~~~~~~l~~~~~~~~~  376 (404)
T 1i24_A          324 LGL-DVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQ  376 (404)
T ss_dssp             TTC-CCCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHH
T ss_pred             hCC-CccccccCcccCccccceEecCHHHHHHcCCCcCcCHHHHHHHHHHHHHh
Confidence            552 22110000001  1233466899999889999999999999999999864

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=6.6e-42  Score=300.42  Aligned_cols=292  Identities=21%  Similarity=0.208  Sum_probs=219.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC--CCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG--CAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~   81 (327)
                      .||+|||||||||||++++++|+++|++|++++|+.......+.   .    ..+++++.+|++|++++.+++++  +|+
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~---~----~~~~~~~~~Dl~d~~~~~~~~~~~~~D~   92 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLK---D----HPNLTFVEGSIADHALVNQLIGDLQPDA   92 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC---C----CTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHh---h----cCCceEEEEeCCCHHHHHHHHhccCCcE
Confidence            36789999999999999999999999999999994332222111   1    14789999999999999999987  999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeec--CCCCCcccCCCCCChhHhhhcCC
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFS--GKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~--~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |||||+..... .....+ +++|+.++.++++++++.+ +++|||+||.++|+..  .... +++|++           .
T Consensus        93 vih~A~~~~~~-~~~~~~-~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~g~~~~~~~~-~~~E~~-----------~  157 (333)
T 2q1w_A           93 VVHTAASYKDP-DDWYND-TLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCYGVKPIQQPV-RLDHPR-----------N  157 (333)
T ss_dssp             EEECCCCCSCT-TCHHHH-HHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGCSCCCSSSB-CTTSCC-----------C
T ss_pred             EEECceecCCC-ccCChH-HHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCcccCCC-CcCCCC-----------C
Confidence            99999976542 222224 8999999999999999987 8899999999998511  2222 677775           2


Q ss_pred             Cc-hhhHhhhHHHHHHHHH-HHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC-CCeeeHHHHH
Q 020334          160 WG-KSYVLTKTLTERAALE-FAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN-ISMVHIDDVA  236 (327)
Q Consensus       160 ~~-~~Y~~sK~~~e~~~~~-~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a  236 (327)
                      |. ++|+.+|..+|.+++. ++     +++++||+++|||+..   ...+..++.........+. ... ++++|++|+|
T Consensus       158 p~~~~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva  228 (333)
T 2q1w_A          158 PANSSYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRNV---SGPLPIFFQRLSEGKKCFV-TKARRDFVFVKDLA  228 (333)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTCC---SSHHHHHHHHHHTTCCCEE-EECEECEEEHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCCc---CcHHHHHHHHHHcCCeeeC-CCceEeeEEHHHHH
Confidence            34 6899999999999987 54     7899999999999832   2344444443322222233 223 7999999999


Q ss_pred             HHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCccc--ccccccccChHHHHhccccccccHHHH
Q 020334          237 RAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEI--EGYKLSALSSKKLLDICFTYKYGIDEM  313 (327)
Q Consensus       237 ~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~k~~~lg~~p~~~~~~~  313 (327)
                      ++++.+++++. +++||+ +++.+|+.|+++.+++.+|...+.......+.  .......+|++|++.+||+|+++++++
T Consensus       229 ~ai~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~  307 (333)
T 2q1w_A          229 RATVRAVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGPDDAPSILLDPSRTIQDFGKIEFTPLKET  307 (333)
T ss_dssp             HHHHHHHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTTCSSCCCCEEEECCTTSCCCCCBCCHHHHHHHCCCCCCCHHHH
T ss_pred             HHHHHHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhCCCCceeCCCCCcccccccccccCCHHHHHhcCCCcCCCHHHH
Confidence            99999998876 779997 56789999999999999884322211000011  112567899999944499999999999


Q ss_pred             HHHHHHHHHHcCCC
Q 020334          314 FDGAIKCCKERGYL  327 (327)
Q Consensus       314 l~~~~~~~~~~~~~  327 (327)
                      |+++++|++++|++
T Consensus       308 l~~~~~~~~~~~~~  321 (333)
T 2q1w_A          308 VAAAVAYFREYGVS  321 (333)
T ss_dssp             HHHHHHHHHHHCC-
T ss_pred             HHHHHHHHHHHCCC
Confidence            99999999998864

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=4e-42  Score=303.21  Aligned_cols=302  Identities=16%  Similarity=0.124  Sum_probs=226.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC--CCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG--CAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~   81 (327)
                      +|+|||||||||||++++++|+++|++|++++|+..... ..+..+..    ..+++++.+|++|++++.+++++  +|+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   78 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGI----ENDVKIIHMDLLEFSNIIRTIEKVQPDE   78 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTC----TTTEEECCCCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccc----cCceeEEECCCCCHHHHHHHHHhcCCCE
Confidence            578999999999999999999999999999999432211 11221111    24789999999999999998874  699


Q ss_pred             EEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCc-cEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcC
Q 020334           82 VIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTV-KRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLD  158 (327)
Q Consensus        82 vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (327)
                      ||||||....  ...++. ..+++|+.++.++++++++.+ + ++|||+||.++|+  .....+++|+++         .
T Consensus        79 vih~A~~~~~~~~~~~~~-~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg--~~~~~~~~e~~~---------~  145 (345)
T 2z1m_A           79 VYNLAAQSFVGVSFEQPI-LTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMFG--KVQEIPQTEKTP---------F  145 (345)
T ss_dssp             EEECCCCCCHHHHTTSHH-HHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGGC--SCSSSSBCTTSC---------C
T ss_pred             EEECCCCcchhhhhhCHH-HHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhcC--CCCCCCCCccCC---------C
Confidence            9999997542  123444 889999999999999999876 5 7999999999996  334567888875         3


Q ss_pred             CCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC-chHHHHHHH-HhCCccc--cccccC-CCeeeHH
Q 020334          159 IWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA-GSVRSTLAM-VLGNREE--YSILLN-ISMVHID  233 (327)
Q Consensus       159 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~-~~~~~~~~~-~~~~~~~--~~~~~~-~~~i~v~  233 (327)
                      .|.++|+.+|..+|.+++.++++++++++++|++++|||+...... ..+...... ..+....  +..... ++|+|++
T Consensus       146 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  225 (345)
T 2z1m_A          146 YPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAP  225 (345)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHH
Confidence            5577899999999999999998889999999999999998543211 112222222 2333222  222223 7899999


Q ss_pred             HHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCC-C-----CCCC----------CCCc----cccccccc
Q 020334          234 DVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEY-P-----IPNV----------DSLS----EIEGYKLS  292 (327)
Q Consensus       234 D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~-~-----~~~~----------~~~~----~~~~~~~~  292 (327)
                      |+|++++.+++++. +++||+ +++.+|+.|+++.+++.+|.. +     +|.+          ....    ........
T Consensus       226 Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (345)
T 2z1m_A          226 EYVEAMWLMMQQPE-PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDIL  304 (345)
T ss_dssp             HHHHHHHHHHTSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBC
T ss_pred             HHHHHHHHHHhCCC-CceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCccee
Confidence            99999999998765 478986 567899999999999998831 1     1110          0000    01122345


Q ss_pred             ccChHHH-HhccccccccHHHHHHHHHHHHHHc
Q 020334          293 ALSSKKL-LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       293 ~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      .+|++|+ +.|||+|+++++++|+++++|++++
T Consensus       305 ~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  337 (345)
T 2z1m_A          305 VGNPEKAMKKLGWKPRTTFDELVEIMMEADLKR  337 (345)
T ss_dssp             CBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             ecCHHHHHHHcCCcccCCHHHHHHHHHHHHHHH
Confidence            6799999 7899999989999999999999863

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=7.7e-43  Score=303.37  Aligned_cols=293  Identities=19%  Similarity=0.202  Sum_probs=212.9

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC-----CC
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG-----CA   80 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-----~d   80 (327)
                      +|||||||||||++++++|+++| ++|++++| .+.... ...+.       ++. +.+|+.|.+.+.+++++     +|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~-~~~~~-------~~~-~~~d~~~~~~~~~~~~~~~~~~~d   70 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDN-LKDGTK-FVNLV-------DLN-IADYMDKEDFLIQIMAGEEFGDVE   70 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEEC-CSSGGG-GHHHH-------TSC-CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEcc-CCCCch-hhhcC-------cce-eccccccHHHHHHHHhccccCCCc
Confidence            59999999999999999999999 99999999 432211 11221       223 67899999999998875     99


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      +|||+|+.......++. +.+++|+.++.++++++++.+ + +|||+||.++|+  .....+++|+++         ..|
T Consensus        71 ~vi~~a~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g--~~~~~~~~E~~~---------~~p  136 (310)
T 1eq2_A           71 AIFHEGACSSTTEWDGK-YMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYG--GRTSDFIESREY---------EKP  136 (310)
T ss_dssp             EEEECCSCCCTTCCCHH-HHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGT--TCCSCBCSSGGG---------CCC
T ss_pred             EEEECcccccCcccCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhC--CCCCCCCCCCCC---------CCC
Confidence            99999997665444554 889999999999999999988 7 999999999985  334457788764         356


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC--CCchHHHHHHHHh-CCccc-cccc-c-CCCeeeHHH
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK--FAGSVRSTLAMVL-GNREE-YSIL-L-NISMVHIDD  234 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~~~~~-~~~~~-~~~~-~-~~~~i~v~D  234 (327)
                      .++|+.+|..+|.+++.++++++++++++||+.+|||+....  ....+..+..... +.... +..+ . .++|+|++|
T Consensus       137 ~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~D  216 (310)
T 1eq2_A          137 LNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD  216 (310)
T ss_dssp             SSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHH
Confidence            778999999999999999887899999999999999975421  1234444444433 33322 2222 2 569999999


Q ss_pred             HHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCccc--ccccccccChHHHHhccc-cccccH
Q 020334          235 VARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEI--EGYKLSALSSKKLLDICF-TYKYGI  310 (327)
Q Consensus       235 ~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~k~~~lg~-~p~~~~  310 (327)
                      +|++++.+++++. +++||+ +++.+|+.|+++.+.+.+|...++........  .......+|++|+++||| .|.+++
T Consensus       217 va~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~l  295 (310)
T 1eq2_A          217 VADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTV  295 (310)
T ss_dssp             HHHHHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHHTTCCCCCCCH
T ss_pred             HHHHHHHHHhcCC-CCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhhhcccccccccchHHHHhcCCCCCCCCH
Confidence            9999999998876 789997 56789999999999998873212211011111  123346789999977999 788899


Q ss_pred             HHHHHHHHHHHHHc
Q 020334          311 DEMFDGAIKCCKER  324 (327)
Q Consensus       311 ~~~l~~~~~~~~~~  324 (327)
                      +++|+++++|++++
T Consensus       296 ~~~l~~~~~~~~~~  309 (310)
T 1eq2_A          296 AEGVTEYMAWLNRD  309 (310)
T ss_dssp             HHHHHHHHHHTC--
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999999754

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=3.3e-42  Score=307.87  Aligned_cols=306  Identities=16%  Similarity=0.127  Sum_probs=225.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC-cchhhhhhCCC-CCCC-CeEEEeCCCCChhHHHHHhcC--
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH-KKDLSFLTNLP-GASE-RLQIFNADLNDPESFDAAIAG--   78 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~-~~~~-~~~~~~~D~~d~~~~~~~~~~--   78 (327)
                      |+++|||||||||||++++++|+++|++|++++|+.... ...+..+.... .... +++++.+|++|++++.+++++  
T Consensus        27 M~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  106 (381)
T 1n7h_A           27 PRKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIK  106 (381)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred             hCCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcC
Confidence            347899999999999999999999999999999943321 11121111100 0012 788999999999999998874  


Q ss_pred             CCEEEEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCcc-----EEEEeccceeeeecCCCCCcccCCCCCCh
Q 020334           79 CAGVIHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVK-----RFVYTSSGSTVYFSGKDVDMLDETFWSDE  151 (327)
Q Consensus        79 ~d~vih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-----~~v~~SS~~v~~~~~~~~~~~~E~~~~~~  151 (327)
                      +|+|||||+.....  ..++. ..+++|+.++.++++++++.+ ++     +|||+||.++|+.  ... +++|+++   
T Consensus       107 ~d~Vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~vyg~--~~~-~~~E~~~---  178 (381)
T 1n7h_A          107 PDEVYNLAAQSHVAVSFEIPD-YTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMFGS--TPP-PQSETTP---  178 (381)
T ss_dssp             CSEEEECCSCCCHHHHHHSHH-HHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGGTT--SCS-SBCTTSC---
T ss_pred             CCEEEECCcccCccccccCHH-HHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHHhCC--CCC-CCCCCCC---
Confidence            79999999975421  22343 789999999999999999876 55     9999999999963  233 8888875   


Q ss_pred             hHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC-chHHHHHH-HHhCCccc--cccccC-
Q 020334          152 DYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA-GSVRSTLA-MVLGNREE--YSILLN-  226 (327)
Q Consensus       152 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~-~~~~~~~~-~~~~~~~~--~~~~~~-  226 (327)
                            ..|.++|+.+|..+|.+++.++++++++++++|++++|||+...... ..+..++. ...+....  ++.+.. 
T Consensus       179 ------~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~  252 (381)
T 1n7h_A          179 ------FHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQAS  252 (381)
T ss_dssp             ------CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCE
T ss_pred             ------CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCce
Confidence                  35677899999999999999998889999999999999998643221 11222222 23343322  222223 


Q ss_pred             CCeeeHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCC-C--CCCCCCCcccccccccccChHHH-Hh
Q 020334          227 ISMVHIDDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEY-P--IPNVDSLSEIEGYKLSALSSKKL-LD  301 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~-~--~~~~~~~~~~~~~~~~~~d~~k~-~~  301 (327)
                      ++|+|++|+|++++.+++++. +++||+ +++.+|+.|+++.+.+.+|.. .  ++...............+|++|+ +.
T Consensus       253 ~~~v~v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  331 (381)
T 1n7h_A          253 RDWGFAGDYVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEV  331 (381)
T ss_dssp             EECEEHHHHHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHH
T ss_pred             eeeEEHHHHHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccCCccccccccCCHHHHHHh
Confidence            799999999999999998765 579987 567899999999999998831 1  11100000112234567899999 77


Q ss_pred             ccccccccHHHHHHHHHHHHHHc
Q 020334          302 ICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       302 lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      |||+|+++++++|+++++||+++
T Consensus       332 lG~~p~~~l~e~l~~~~~~~~~~  354 (381)
T 1n7h_A          332 LGWKPQVGFEKLVKMMVDEDLEL  354 (381)
T ss_dssp             HCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             cCCcccCCHHHHHHHHHHHHHhh
Confidence            99999889999999999999764

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=1.5e-42  Score=307.48  Aligned_cols=295  Identities=18%  Similarity=0.180  Sum_probs=222.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----C
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----G   78 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~   78 (327)
                      +|+|||||||||||++|+++|+++| ++|++++| .+.... ...+       .++. +.+|+.|.+.+.++++     +
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~-~~~~-------~~~~-~~~d~~~~~~~~~~~~~~~~~~  115 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDN-LKDGTK-FVNL-------VDLN-IADYMDKEDFLIQIMAGEEFGD  115 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEEC-CSSGGG-GGGT-------TTSC-CSEEEEHHHHHHHHHTTCCCSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEec-CCCcch-hhcc-------cCce-EeeecCcHHHHHHHHhhcccCC
Confidence            4789999999999999999999999 99999999 432211 1111       1233 6789999999998887     5


Q ss_pred             CCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcC
Q 020334           79 CAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLD  158 (327)
Q Consensus        79 ~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (327)
                      +|+|||+|+.......++. +.+++|+.++.++++++++.+ + +|||+||..+|+  .....+++|+++         .
T Consensus       116 ~d~Vih~A~~~~~~~~~~~-~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g--~~~~~~~~E~~~---------~  181 (357)
T 2x6t_A          116 VEAIFHEGACSSTTEWDGK-YMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYG--GRTSDFIESREY---------E  181 (357)
T ss_dssp             CCEEEECCSCCCTTCCCHH-HHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGC--SCSSCCCSSGGG---------C
T ss_pred             CCEEEECCcccCCccCCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhC--CCCCCCcCCcCC---------C
Confidence            9999999997655444554 889999999999999999988 7 999999999985  334457788764         3


Q ss_pred             CCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC--CCchHHHHHHHH-hCCcccc-ccc-c-CCCeeeH
Q 020334          159 IWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK--FAGSVRSTLAMV-LGNREEY-SIL-L-NISMVHI  232 (327)
Q Consensus       159 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~~~~-~~~~~~~-~~~-~-~~~~i~v  232 (327)
                      .|.++|+.+|..+|.+++.++++++++++++||+.+|||+....  ....+..+.... .+....+ ..+ . .++|+|+
T Consensus       182 ~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  261 (357)
T 2x6t_A          182 KPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYV  261 (357)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEH
Confidence            55778999999999999999887899999999999999976431  123444444443 3333322 222 2 4599999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCccc--ccccccccChHHHHhccc-cccc
Q 020334          233 DDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEI--EGYKLSALSSKKLLDICF-TYKY  308 (327)
Q Consensus       233 ~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~k~~~lg~-~p~~  308 (327)
                      +|+|++++.+++++. +++||+ +++.+|+.|+++.+.+.+|...++........  .......+|++|+++||| .|.+
T Consensus       262 ~Dva~ai~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~  340 (357)
T 2x6t_A          262 GDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFK  340 (357)
T ss_dssp             HHHHHHHHHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGGTTSCCSBCCCCCHHHHHTTCCCCCC
T ss_pred             HHHHHHHHHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCcccccccccccccCHHHHHHcCCCCCCC
Confidence            999999999998876 789997 56789999999999998884322111011111  123346789999977999 7888


Q ss_pred             cHHHHHHHHHHHHHHc
Q 020334          309 GIDEMFDGAIKCCKER  324 (327)
Q Consensus       309 ~~~~~l~~~~~~~~~~  324 (327)
                      +++++|+++++|++++
T Consensus       341 ~l~e~l~~~~~~~~~~  356 (357)
T 2x6t_A          341 TVAEGVTEYMAWLNRD  356 (357)
T ss_dssp             CHHHHHHHHHHHHC--
T ss_pred             CHHHHHHHHHHHHhhc
Confidence            9999999999999753

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=8e-42  Score=304.44  Aligned_cols=306  Identities=15%  Similarity=0.145  Sum_probs=223.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC-cchhhhhhCCC-CCCCCeEEEeCCCCChhHHHHHhcC--CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH-KKDLSFLTNLP-GASERLQIFNADLNDPESFDAAIAG--CA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~--~d   80 (327)
                      ||+|||||||||||++++++|+++|++|++++|+.... ...+..+.... ....+++++.+|++|++++.+++++  +|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            47899999999999999999999999999999943211 11122111100 0024788999999999999988874  79


Q ss_pred             EEEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCc---cEEEEeccceeeeecCCCCCcccCCCCCChhHhh
Q 020334           81 GVIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTV---KRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIR  155 (327)
Q Consensus        81 ~vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~---~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~  155 (327)
                      +|||||+....  ...++. ..+++|+.++.++++++++.+ +   ++|||+||.++|+  .....+++|+++       
T Consensus        81 ~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v~g--~~~~~~~~E~~~-------  149 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPE-YTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYG--LVQEIPQKETTP-------  149 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHH-HHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGT--TCCSSSBCTTSC-------
T ss_pred             EEEECCcccCccccccCHH-HHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhhhC--CCCCCCCCccCC-------
Confidence            99999997542  233444 788999999999999999887 6   7999999999985  334567888875       


Q ss_pred             hcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC-chHHHHHHH-HhCCcc--ccccccC-CCee
Q 020334          156 KLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA-GSVRSTLAM-VLGNRE--EYSILLN-ISMV  230 (327)
Q Consensus       156 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~-~~~~~~~~~-~~~~~~--~~~~~~~-~~~i  230 (327)
                        ..|.++|+.+|..+|.+++.++++++++++++|++++|||+...... ..+..++.. ..+...  .++.+.+ ++|+
T Consensus       150 --~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i  227 (372)
T 1db3_A          150 --FYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWG  227 (372)
T ss_dssp             --CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCE
T ss_pred             --CCCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeee
Confidence              35577899999999999999998889999999999999997653221 122333333 234322  2232233 7999


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCC-CC-----CCCC--------------------CCC
Q 020334          231 HIDDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPE-YP-----IPNV--------------------DSL  283 (327)
Q Consensus       231 ~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~-~~-----~~~~--------------------~~~  283 (327)
                      |++|+|++++.+++++. +++||+ +++.+|+.|+++.+++.+|. .+     +|.+                    ...
T Consensus       228 ~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  306 (372)
T 1db3_A          228 HAKDYVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAV  306 (372)
T ss_dssp             EHHHHHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEE
T ss_pred             EHHHHHHHHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeec
Confidence            99999999999998765 578996 56789999999999998872 11     1100                    000


Q ss_pred             -c---ccccccccccChHHH-HhccccccccHHHHHHHHHHHHHHc
Q 020334          284 -S---EIEGYKLSALSSKKL-LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       284 -~---~~~~~~~~~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                       .   .........+|++|+ ++|||+|+++++|+|+++++||+++
T Consensus       307 ~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  352 (372)
T 1db3_A          307 DPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEA  352 (372)
T ss_dssp             CGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             cccccCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHh
Confidence             0   011223466899999 7899999999999999999999763

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=7.4e-42  Score=301.15  Aligned_cols=310  Identities=23%  Similarity=0.312  Sum_probs=226.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhh-CCCCCCCCeEEE-eCCCCChhHHHHHhcCCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLT-NLPGASERLQIF-NADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~d~v   82 (327)
                      +|+|||||||||||++++++|+++|++|++++| ++.....+.... ...  ..+++++ .+|++|++++.++++++|+|
T Consensus        11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~d~v   87 (342)
T 1y1p_A           11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAKY--PGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHHHS--TTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC-CcccHHHHHHHhhccC--CCceEEEEecCCcChHHHHHHHcCCCEE
Confidence            578999999999999999999999999999999 433222221110 000  1468888 89999999999999999999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCC--CCCcccCCCCCChhHhh-----
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGK--DVDMLDETFWSDEDYIR-----  155 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~--~~~~~~E~~~~~~~~~~-----  155 (327)
                      ||+|+..... .++. +.+++|+.++.++++++++...+++|||+||.++|+....  ...+++|+++.......     
T Consensus        88 ih~A~~~~~~-~~~~-~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  165 (342)
T 1y1p_A           88 AHIASVVSFS-NKYD-EVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLP  165 (342)
T ss_dssp             EECCCCCSCC-SCHH-HHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSC
T ss_pred             EEeCCCCCCC-CCHH-HHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccc
Confidence            9999976543 3444 8899999999999999985323789999999998853222  12678888864321100     


Q ss_pred             --hcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCc-hHHHHHHH-HhCCccc-cccccCCC
Q 020334          156 --KLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKFAG-SVRSTLAM-VLGNREE-YSILLNIS  228 (327)
Q Consensus       156 --~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~~-~~~~~~~~-~~~~~~~-~~~~~~~~  228 (327)
                        ....|.++|+.+|..+|.+++.+++++  +++++++||+++|||........ .+..++.. ..+.... +.....++
T Consensus       166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (342)
T 1y1p_A          166 ESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQY  245 (342)
T ss_dssp             TTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEE
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCC
Confidence              011345789999999999999998875  78999999999999986543222 44444443 3344433 22223479


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCc-eEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHH-Hhccc--
Q 020334          229 MVHIDDVARAHIFLLEYPDAKG-RYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL-LDICF--  304 (327)
Q Consensus       229 ~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~--  304 (327)
                      |+|++|+|++++.+++++...| .|+++++.+|+.|+++.+.+.+|...++.  .... .......+|++|+ +.|||  
T Consensus       246 ~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~--~~~~-~~~~~~~~d~~k~~~~lg~~~  322 (342)
T 1y1p_A          246 YVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPA--DFPD-QGQDLSKFDTAPSLEILKSLG  322 (342)
T ss_dssp             EEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCC--CCCC-CCCCCCEECCHHHHHHHHHTT
T ss_pred             EeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCccCCC--CCCc-cccccccCChHHHHHHHhhcc
Confidence            9999999999999998765444 55567778999999999999998433332  1111 1122367899999 77888  


Q ss_pred             -cccccHHHHHHHHHHHHH
Q 020334          305 -TYKYGIDEMFDGAIKCCK  322 (327)
Q Consensus       305 -~p~~~~~~~l~~~~~~~~  322 (327)
                       .+..+++++|+++++|++
T Consensus       323 ~~~~~~l~~~l~~~~~~~~  341 (342)
T 1y1p_A          323 RPGWRSIEESIKDLVGSET  341 (342)
T ss_dssp             CCSCCCHHHHHHHHHCCSC
T ss_pred             cCCcCCHHHHHHHHHHHhh
Confidence             455599999999999975

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=3.4e-42  Score=296.00  Aligned_cols=267  Identities=14%  Similarity=0.129  Sum_probs=204.8

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      .|||+|||||| ||||++++++|+++|++|++++| ++.....+.        ..+++++.+|+.|.+     +.++|+|
T Consensus         3 ~m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~--------~~~~~~~~~D~~d~~-----~~~~d~v   67 (286)
T 3ius_A            3 AMTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSR-NPDQMEAIR--------ASGAEPLLWPGEEPS-----LDGVTHL   67 (286)
T ss_dssp             --CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEES-CGGGHHHHH--------HTTEEEEESSSSCCC-----CTTCCEE
T ss_pred             CCcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEc-ChhhhhhHh--------hCCCeEEEecccccc-----cCCCCEE
Confidence            46789999998 99999999999999999999999 443332222        147899999999954     7789999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHh--cCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLK--SGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~--~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      ||+|+.....  .+          .+.++++++++  .+ +++|||+||.++|+  .....+++|+++         ..|
T Consensus        68 i~~a~~~~~~--~~----------~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg--~~~~~~~~E~~~---------~~p  123 (286)
T 3ius_A           68 LISTAPDSGG--DP----------VLAALGDQIAARAAQ-FRWVGYLSTTAVYG--DHDGAWVDETTP---------LTP  123 (286)
T ss_dssp             EECCCCBTTB--CH----------HHHHHHHHHHHTGGG-CSEEEEEEEGGGGC--CCTTCEECTTSC---------CCC
T ss_pred             EECCCccccc--cH----------HHHHHHHHHHhhcCC-ceEEEEeecceecC--CCCCCCcCCCCC---------CCC
Confidence            9999975432  11          24688888888  45 89999999999996  445668899886         356


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC-CCeeeHHHHHHHH
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN-ISMVHIDDVARAH  239 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~~~  239 (327)
                      .++|+.+|..+|++++.+   .+++++++||+++|||+.... ..       ...+....+...++ ++|+|++|+|+++
T Consensus       124 ~~~Y~~sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~-~~-------~~~~~~~~~~~~~~~~~~i~v~Dva~a~  192 (286)
T 3ius_A          124 TAARGRWRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGPF-SK-------LGKGGIRRIIKPGQVFSRIHVEDIAQVL  192 (286)
T ss_dssp             CSHHHHHHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSSS-TT-------SSSSCCCEEECTTCCBCEEEHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhh---cCCCEEEEeccceECCCchHH-HH-------HhcCCccccCCCCcccceEEHHHHHHHH
Confidence            789999999999999876   589999999999999985431 11       11233333333334 7999999999999


Q ss_pred             HHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcc--c------ccccccccChHHH-Hhccccccc-
Q 020334          240 IFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSE--I------EGYKLSALSSKKL-LDICFTYKY-  308 (327)
Q Consensus       240 ~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~--~------~~~~~~~~d~~k~-~~lg~~p~~-  308 (327)
                      +.+++++..+++||+ +++.+|+.|+++.+++.+|... +.......  .      .......+|++|+ +.|||+|++ 
T Consensus       193 ~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p  271 (286)
T 3ius_A          193 AASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLPL-PPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYP  271 (286)
T ss_dssp             HHHHHSCCTTCEEEECCSCCBCHHHHHHHHHHHHTCCC-CCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCS
T ss_pred             HHHHhCCCCCCEEEEeCCCCccHHHHHHHHHHHcCCCC-CcccchhhhccChhHHHhhcCCceeehHHHHHHhCCCCCcC
Confidence            999999887779997 5678999999999999888321 11001111  1      1125677899999 669999999 


Q ss_pred             cHHHHHHHHHHH
Q 020334          309 GIDEMFDGAIKC  320 (327)
Q Consensus       309 ~~~~~l~~~~~~  320 (327)
                      +++++|+++++.
T Consensus       272 ~~~e~l~~~~~~  283 (286)
T 3ius_A          272 NYRVGLEALQAD  283 (286)
T ss_dssp             SHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHh
Confidence            799999999874

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=1.4e-42  Score=300.21  Aligned_cols=278  Identities=13%  Similarity=0.043  Sum_probs=214.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC--CCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG--CAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi   83 (327)
                      |+|||||||||||++++++|+ +|++|++++| ++                   .++.+|+.|++++.+++++  +|+||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r-~~-------------------~~~~~D~~d~~~~~~~~~~~~~d~vi   59 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDV-HS-------------------KEFCGDFSNPKGVAETVRKLRPDVIV   59 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECT-TC-------------------SSSCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEecc-cc-------------------ccccccCCCHHHHHHHHHhcCCCEEE
Confidence            479999999999999999999 8999999999 32                   1245999999999998875  99999


Q ss_pred             EccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           84 HVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        84 h~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      |+|+....  ...++. +.+++|+.++.++++++++.+ + +|||+||.++|+  .....+++|+++         ..|.
T Consensus        60 h~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~--~~~~~~~~E~~~---------~~p~  125 (299)
T 1n2s_A           60 NAAAHTAVDKAESEPE-LAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFP--GTGDIPWQETDA---------TSPL  125 (299)
T ss_dssp             ECCCCCCHHHHTTCHH-HHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSC--CCTTCCBCTTSC---------CCCS
T ss_pred             ECcccCCHhhhhcCHH-HHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEe--CCCCCCCCCCCC---------CCCc
Confidence            99997542  233444 889999999999999999887 5 899999999996  334567888875         3567


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHH-hCCccccccccCCCeeeHHHHHHHHH
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-LGNREEYSILLNISMVHIDDVARAHI  240 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~~~~  240 (327)
                      ++|+.+|..+|.+++.++    .+++++||+.+|||+..    ..+..+.... .+..........++|+|++|+|++++
T Consensus       126 ~~Y~~sK~~~E~~~~~~~----~~~~ilRp~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  197 (299)
T 1n2s_A          126 NVYGKTKLAGEKALQDNC----PKHLIFRTSWVYAGKGN----NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTA  197 (299)
T ss_dssp             SHHHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSC----CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhC----CCeEEEeeeeecCCCcC----cHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHH
Confidence            789999999999998764    48999999999999753    2344344333 34333332223389999999999999


Q ss_pred             HhhcCC--C--CCceEEE-eccccCHHHHHHHHHHhCCCC----CCCCC-----CCCcc-cccccccccChHHH-Hhccc
Q 020334          241 FLLEYP--D--AKGRYIC-SSAKLTIQEMAEFLSAKHPEY----PIPNV-----DSLSE-IEGYKLSALSSKKL-LDICF  304 (327)
Q Consensus       241 ~~~~~~--~--~~~~y~~-~~~~~s~~e~~~~i~~~~~~~----~~~~~-----~~~~~-~~~~~~~~~d~~k~-~~lg~  304 (327)
                      .+++++  .  .+++||+ +++.+|++|+++.+.+.+|..    ..+..     ..+.. ........+|++|+ +.|||
T Consensus       198 ~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~  277 (299)
T 1n2s_A          198 HAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDL  277 (299)
T ss_dssp             HHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTC
T ss_pred             HHHHHhccccccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHhcCC
Confidence            999876  3  3779996 557899999999999876621    00100     00101 12245678999999 77999


Q ss_pred             cccccHHHHHHHHHHHHHHcCCC
Q 020334          305 TYKYGIDEMFDGAIKCCKERGYL  327 (327)
Q Consensus       305 ~p~~~~~~~l~~~~~~~~~~~~~  327 (327)
                      +|+ +++++|+++++||++++.|
T Consensus       278 ~p~-~~~~~l~~~~~~~~~~~~i  299 (299)
T 1n2s_A          278 ILP-QWELGVKRMLTEMFTTTTI  299 (299)
T ss_dssp             CCC-BHHHHHHHHHHHHHSCCC-
T ss_pred             CCC-CHHHHHHHHHHHHHhcCCC
Confidence            999 9999999999999987754

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.1e-41  Score=300.28  Aligned_cols=297  Identities=16%  Similarity=0.092  Sum_probs=223.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC-------CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHh
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG-------YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAI   76 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~   76 (327)
                      ++|+||||||+||||++++++|+++|       ++|++++|+.. ....        ....+++++.+|++|++++.+++
T Consensus        13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~-~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~   83 (342)
T 2hrz_A           13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQP-EAPA--------GFSGAVDARAADLSAPGEAEKLV   83 (342)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCC-CCCT--------TCCSEEEEEECCTTSTTHHHHHH
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCC-cccc--------ccCCceeEEEcCCCCHHHHHHHH
Confidence            36789999999999999999999999       89999999432 2111        01247889999999999999988


Q ss_pred             c-CCCEEEEccCCCCC-CCCchHHHHHHHHHhHHHHHHHHHHhcC----CccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           77 A-GCAGVIHVAAPIDI-DGKETEEVMTQRAVNGTIGILKSCLKSG----TVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        77 ~-~~d~vih~a~~~~~-~~~~~~~~~~~~nv~~~~~l~~~~~~~~----~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                      + ++|+|||+|+.... ...++. ..+++|+.++.++++++++.+    .+++|||+||.++|+  .....+++|+++  
T Consensus        84 ~~~~d~vih~A~~~~~~~~~~~~-~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~--~~~~~~~~E~~~--  158 (342)
T 2hrz_A           84 EARPDVIFHLAAIVSGEAELDFD-KGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFG--APLPYPIPDEFH--  158 (342)
T ss_dssp             HTCCSEEEECCCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCC--SSCCSSBCTTCC--
T ss_pred             hcCCCEEEECCccCcccccccHH-HHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhC--CCCCCCcCCCCC--
Confidence            4 89999999996542 122343 789999999999999998764    368999999999986  333467888876  


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceec-CCCCCCC-CchHHHHHHHH-hCCccccccccC-
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVG-PFICPKF-AGSVRSTLAMV-LGNREEYSILLN-  226 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G-~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~-  226 (327)
                             ..|.++|+.+|..+|.+++.++++.+++.+++|++.+|| |+..... ...+..++... .+....++..++ 
T Consensus       159 -------~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (342)
T 2hrz_A          159 -------TTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESI  231 (342)
T ss_dssp             -------CCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTC
T ss_pred             -------CCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCcc
Confidence                   245778999999999999999887789999999999999 7643211 22334444333 344333332222 


Q ss_pred             -CCeeeHHHHHHHHHHhhcCCC----CCceEEEeccccCHHHHHHHHHHhCCCCC---CCCCCCCcc---cccccccccC
Q 020334          227 -ISMVHIDDVARAHIFLLEYPD----AKGRYICSSAKLTIQEMAEFLSAKHPEYP---IPNVDSLSE---IEGYKLSALS  295 (327)
Q Consensus       227 -~~~i~v~D~a~~~~~~~~~~~----~~~~y~~~~~~~s~~e~~~~i~~~~~~~~---~~~~~~~~~---~~~~~~~~~d  295 (327)
                       ++++|++|+|++++.+++.+.    .+++||++++.+|++|+++.+++.+|...   +... +...   ........+|
T Consensus       232 ~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~d  310 (342)
T 2hrz_A          232 RHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEKAVALIRRE-PNEMIMRMCEGWAPGFE  310 (342)
T ss_dssp             EEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCCEEEEHHHHHHHHHHHHCHHHHTTEEEC-CCHHHHHHHTTSCCCBC
T ss_pred             ceeeEehHHHHHHHHHHHhccccccCCccEEEcCCCCCCHHHHHHHHHHHcCcccccceeec-cCcchhhhhcccccccC
Confidence             578999999999999998753    35689987788999999999999887211   1110 1111   1111223589


Q ss_pred             hHHHHhccccccccHHHHHHHHHHHHH
Q 020334          296 SKKLLDICFTYKYGIDEMFDGAIKCCK  322 (327)
Q Consensus       296 ~~k~~~lg~~p~~~~~~~l~~~~~~~~  322 (327)
                      ++|++.|||+|+++++++|+++++||+
T Consensus       311 ~~k~~~lG~~p~~~l~e~l~~~~~~~~  337 (342)
T 2hrz_A          311 AKRARELGFTAESSFEEIIQVHIEDEL  337 (342)
T ss_dssp             CHHHHHTTCCCCSSHHHHHHHHHHHHS
T ss_pred             hHHHHHcCCCCCCCHHHHHHHHHHHhc
Confidence            999944999999899999999999998

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=4.9e-41  Score=322.12  Aligned_cols=308  Identities=16%  Similarity=0.157  Sum_probs=225.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~   81 (327)
                      ++|+|||||||||||++++++|+++|++|++++|+..........+....  ..+++++.+|++|++++.++++  ++|+
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~~~D~   87 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEYKIDS   87 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc--CCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence            35789999999999999999999999999999994332222111111100  1468899999999999999888  8999


Q ss_pred             EEEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecC--CCCCcccCCCCCChhHhhhc
Q 020334           82 VIHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSG--KDVDMLDETFWSDEDYIRKL  157 (327)
Q Consensus        82 vih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~--~~~~~~~E~~~~~~~~~~~~  157 (327)
                      |||+|+.....  ...+ .+.+++|+.++.+++++|++.+ +++|||+||.++|+...  ....+++|+++         
T Consensus        88 Vih~A~~~~~~~~~~~~-~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~---------  156 (699)
T 1z45_A           88 VIHFAGLKAVGESTQIP-LRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECP---------  156 (699)
T ss_dssp             EEECCSCCCHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSC---------
T ss_pred             EEECCcccCcCccccCH-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHhCCCccccccCCccccCC---------
Confidence            99999975421  1223 3789999999999999999887 89999999999986321  12246777764         


Q ss_pred             CCCchhhHhhhHHHHHHHHHHHHH--cCCcEEEEecCceecCCCCCC--------CCchHHHHHHHHhCC--cccc-c--
Q 020334          158 DIWGKSYVLTKTLTERAALEFAEE--HGLDLVTLIPSFVVGPFICPK--------FAGSVRSTLAMVLGN--REEY-S--  222 (327)
Q Consensus       158 ~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~i~R~~~v~G~~~~~~--------~~~~~~~~~~~~~~~--~~~~-~--  222 (327)
                      ..|.++|+.+|..+|.+++.++++  .+++++++||+++|||.....        ....+..+.....+.  +..+ +  
T Consensus       157 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  236 (699)
T 1z45_A          157 LGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDD  236 (699)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC---
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCc
Confidence            245678999999999999999877  689999999999999864211        122344444444332  2222 2  


Q ss_pred             ----cccC-CCeeeHHHHHHHHHHhhcCC-------CCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcccccc
Q 020334          223 ----ILLN-ISMVHIDDVARAHIFLLEYP-------DAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGY  289 (327)
Q Consensus       223 ----~~~~-~~~i~v~D~a~~~~~~~~~~-------~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~  289 (327)
                          .+.+ ++|+|++|+|++++.+++..       ..+++||+ +++.+|+.|+++.+++.++. +.+...........
T Consensus       237 ~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~  315 (699)
T 1z45_A          237 YDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGI-DLPYKVTGRRAGDV  315 (699)
T ss_dssp             ---CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTC-CCCC---------C
T ss_pred             ccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCC-CCCceecCCCCCcc
Confidence                1223 79999999999999988642       12358997 56789999999999998872 12211011111234


Q ss_pred             cccccChHHH-HhccccccccHHHHHHHHHHHHHHcC
Q 020334          290 KLSALSSKKL-LDICFTYKYGIDEMFDGAIKCCKERG  325 (327)
Q Consensus       290 ~~~~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~~  325 (327)
                      ....+|++|+ ++|||+|+++++++|+++++|+++++
T Consensus       316 ~~~~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~~  352 (699)
T 1z45_A          316 LNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENP  352 (699)
T ss_dssp             CCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             ccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCC
Confidence            5678999999 88999999999999999999998765

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=9.8e-42  Score=297.11  Aligned_cols=284  Identities=17%  Similarity=0.108  Sum_probs=192.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~   81 (327)
                      |+|+|||||||||||++++++|+++|++|++++|+. ..              ++  ++.+|++|++++.++++  ++|+
T Consensus         1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~--------------~~--~~~~Dl~d~~~~~~~~~~~~~d~   63 (315)
T 2ydy_A            1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRR-AR--------------PK--FEQVNLLDSNAVHHIIHDFQPHV   63 (315)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CHHHHHHHCCSE
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCC-CC--------------CC--eEEecCCCHHHHHHHHHhhCCCE
Confidence            457899999999999999999999999999999832 11              12  67799999999988887  4899


Q ss_pred             EEEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           82 VIHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        82 vih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |||||+.....  ..++. +.+++|+.++.++++++++.+ + +|||+||..+|+.   ...+++|+++         ..
T Consensus        64 vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~---~~~~~~E~~~---------~~  128 (315)
T 2ydy_A           64 IVHCAAERRPDVVENQPD-AASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDG---TNPPYREEDI---------PA  128 (315)
T ss_dssp             EEECC--------------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCS---SSCSBCTTSC---------CC
T ss_pred             EEECCcccChhhhhcCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCC---CCCCCCCCCC---------CC
Confidence            99999975432  23444 789999999999999999987 5 9999999999863   4567888875         35


Q ss_pred             CchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHH--hCCccccccccCCCeeeHHHHHH
Q 020334          160 WGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV--LGNREEYSILLNISMVHIDDVAR  237 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~v~D~a~  237 (327)
                      |.++|+.+|..+|.+++.+    +++++++||+.+|||..... ...+..+....  .+..........++++|++|+|+
T Consensus       129 ~~~~Y~~sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  203 (315)
T 2ydy_A          129 PLNLYGKTKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLE-ESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVAT  203 (315)
T ss_dssp             CCSHHHHHHHHHHHHHHHH----CTTCEEEEECSEECSCSSGG-GSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHH
T ss_pred             CcCHHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCccc-ccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHH
Confidence            5778999999999999775    57889999999999986521 01222222332  23333333223379999999999


Q ss_pred             HHHHhhcCC----CCCceEEE-eccccCHHHHHHHHHHhCCCCCC--CCCCCCc--ccccccccccChHHHHhccccccc
Q 020334          238 AHIFLLEYP----DAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPI--PNVDSLS--EIEGYKLSALSSKKLLDICFTYKY  308 (327)
Q Consensus       238 ~~~~~~~~~----~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~--~~~~~~~--~~~~~~~~~~d~~k~~~lg~~p~~  308 (327)
                      +++.+++++    ..+++||+ +++.+|+.|+++.+++.+|....  .......  .........+|++|++.+||+|++
T Consensus       204 a~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~  283 (315)
T 2ydy_A          204 VCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGIGQRT  283 (315)
T ss_dssp             HHHHHHHHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHTTCCCCC
T ss_pred             HHHHHHHhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHHHHhcCCCCCC
Confidence            999998753    45779996 56789999999999999883211  0000001  112334678999999445999999


Q ss_pred             cHHHHHHHHHHHHHHc
Q 020334          309 GIDEMFDGAIKCCKER  324 (327)
Q Consensus       309 ~~~~~l~~~~~~~~~~  324 (327)
                      +++++|+++++||+++
T Consensus       284 ~~~~~l~~~~~~~~~~  299 (315)
T 2ydy_A          284 PFRIGIKESLWPFLID  299 (315)
T ss_dssp             CHHHHHHHHHGGGCC-
T ss_pred             CHHHHHHHHHHHHccc
Confidence            9999999999999765

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-41  Score=292.19  Aligned_cols=269  Identities=14%  Similarity=0.064  Sum_probs=210.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v   82 (327)
                      .++|||||||||||++++++|+++|++|++++| .                       .+|++|++++.++++  ++|+|
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~-----------------------~~Dl~d~~~~~~~~~~~~~d~v   67 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDV-Q-----------------------DLDITNVLAVNKFFNEKKPNVV   67 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECT-T-----------------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccC-c-----------------------cCCCCCHHHHHHHHHhcCCCEE
Confidence            578999999999999999999999999999999 2                       289999999999988  79999


Q ss_pred             EEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           83 IHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        83 ih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      ||||+....  ...++. +.+++|+.++.++++++++.+ + +|||+||.++|+  .....+++|+++         ..|
T Consensus        68 ih~A~~~~~~~~~~~~~-~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~--~~~~~~~~E~~~---------~~~  133 (292)
T 1vl0_A           68 INCAAHTAVDKCEEQYD-LAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFD--GEAKEPITEFDE---------VNP  133 (292)
T ss_dssp             EECCCCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSC--SCCSSCBCTTSC---------CCC
T ss_pred             EECCccCCHHHHhcCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeEC--CCCCCCCCCCCC---------CCC
Confidence            999997542  123344 889999999999999999988 6 999999999986  334567888875         355


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHH-hCCccccccccCCCeeeHHHHHHHH
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-LGNREEYSILLNISMVHIDDVARAH  239 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~~~  239 (327)
                      .++|+.+|..+|.+++.++    .+++++||+.+||| ..    ..+..+.... .+..........++++|++|+|+++
T Consensus       134 ~~~Y~~sK~~~E~~~~~~~----~~~~~lR~~~v~G~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  204 (292)
T 1vl0_A          134 QSAYGKTKLEGENFVKALN----PKYYIVRTAWLYGD-GN----NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVV  204 (292)
T ss_dssp             CSHHHHHHHHHHHHHHHHC----SSEEEEEECSEESS-SS----CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHhhC----CCeEEEeeeeeeCC-Cc----ChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHH
Confidence            7789999999999998753    47999999999999 22    2333333333 3333323222237999999999999


Q ss_pred             HHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCC-C---CCCCCCCcccccccccccChHHH-HhccccccccHHHH
Q 020334          240 IFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEY-P---IPNVDSLSEIEGYKLSALSSKKL-LDICFTYKYGIDEM  313 (327)
Q Consensus       240 ~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~-~---~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p~~~~~~~  313 (327)
                      +.+++++ .+++||+ +++.+|+.|+++.+.+.+|.. .   ++...............+|++|+ +.|||+|+ +++++
T Consensus       205 ~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~  282 (292)
T 1vl0_A          205 LKVIDEK-NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-EWKES  282 (292)
T ss_dssp             HHHHHHT-CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC-BHHHH
T ss_pred             HHHHhcC-CCcEEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHHHcCCCCC-CHHHH
Confidence            9999876 6789996 567899999999999988731 1   12110000112345678999999 77999999 99999


Q ss_pred             HHHHHHHHH
Q 020334          314 FDGAIKCCK  322 (327)
Q Consensus       314 l~~~~~~~~  322 (327)
                      |+++++||+
T Consensus       283 l~~~~~~~~  291 (292)
T 1vl0_A          283 LKEYIDLLQ  291 (292)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHhc
Confidence            999999986

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=2e-40  Score=294.61  Aligned_cols=296  Identities=15%  Similarity=0.058  Sum_probs=221.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-----CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC-
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-----YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG-   78 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-   78 (327)
                      +|+|||||||||||++++++|+++|     ++|++++|+.. ... .        ...+++++.+|++|++++.+++++ 
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~-~~~-~--------~~~~~~~~~~Dl~d~~~~~~~~~~~   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTR-PAW-H--------EDNPINYVQCDISDPDDSQAKLSPL   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCC-CSC-C--------CSSCCEEEECCTTSHHHHHHHHTTC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCC-ccc-c--------ccCceEEEEeecCCHHHHHHHHhcC
Confidence            3689999999999999999999999     99999999432 221 0        124789999999999999999987 


Q ss_pred             --CCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEE-------EeccceeeeecCCCCCcccCCC
Q 020334           79 --CAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFV-------YTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        79 --~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v-------~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                        +|+|||||+...   .++. +.++.|+.++.+++++|++.  + +++||       |+||.++|+.......+++|++
T Consensus        71 ~~~d~vih~a~~~~---~~~~-~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~  145 (364)
T 2v6g_A           71 TDVTHVFYVTWANR---STEQ-ENCEANSKMFRNVLDAVIPNCPN-LKHISLQTGRKHYMGPFESYGKIESHDPPYTEDL  145 (364)
T ss_dssp             TTCCEEEECCCCCC---SSHH-HHHHHHHHHHHHHHHHHTTTCTT-CCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTS
T ss_pred             CCCCEEEECCCCCc---chHH-HHHHHhHHHHHHHHHHHHHhccc-cceEEeccCceEEEechhhccccccCCCCCCccc
Confidence              999999999753   2344 88999999999999999987  5 88998       8999999964323456788887


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcC-CcEEEEecCceecCCCCCCCCchHHH-HHHHH---hCCccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG-LDLVTLIPSFVVGPFICPKFAGSVRS-TLAMV---LGNREEYS  222 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~~~~i~R~~~v~G~~~~~~~~~~~~~-~~~~~---~~~~~~~~  222 (327)
                      +.        .++.+.|    ..+|++++.++++++ ++++++||+.+|||+........... +...+   .+.+..+.
T Consensus       146 ~~--------~~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  213 (364)
T 2v6g_A          146 PR--------LKYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFT  213 (364)
T ss_dssp             CC--------CSSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCC
T ss_pred             cC--------Cccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecC
Confidence            52        1224567    458999988887676 99999999999999875322222222 22222   34443322


Q ss_pred             ccc-----CCCeeeHHHHHHHHHHhhcCCC-CCceEEEe-ccccCHHHHHHHHHHhCCCC------CCCCC---------
Q 020334          223 ILL-----NISMVHIDDVARAHIFLLEYPD-AKGRYICS-SAKLTIQEMAEFLSAKHPEY------PIPNV---------  280 (327)
Q Consensus       223 ~~~-----~~~~i~v~D~a~~~~~~~~~~~-~~~~y~~~-~~~~s~~e~~~~i~~~~~~~------~~~~~---------  280 (327)
                      ..+     ..+++|++|+|++++.+++++. .+++||++ ++.+|+.|+++.+++.+|..      .+|..         
T Consensus       214 g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~  293 (364)
T 2v6g_A          214 GCKAAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKE  293 (364)
T ss_dssp             SCHHHHHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCH
T ss_pred             CCcccccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhH
Confidence            221     2688999999999999998875 45599975 56799999999999988721      22221         


Q ss_pred             ---C------CCccc--ccc-----------cc-cccChHHHHhccccccccHHHHHHHHHHHHHHcCCC
Q 020334          281 ---D------SLSEI--EGY-----------KL-SALSSKKLLDICFTYKYGIDEMFDGAIKCCKERGYL  327 (327)
Q Consensus       281 ---~------~~~~~--~~~-----------~~-~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~~~~  327 (327)
                         .      .....  ...           .. ..+|++|+++|||+|.++++++|+++++|++++|+|
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~g~l  363 (364)
T 2v6g_A          294 PVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYKIV  363 (364)
T ss_dssp             HHHHHHHHHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHhCCCccccccccccchhhhccccchhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence               0      00000  011           33 578999995599999889999999999999999986

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=2.5e-40  Score=314.78  Aligned_cols=307  Identities=17%  Similarity=0.193  Sum_probs=228.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhH-HHHHhcCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPES-FDAAIAGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~~~d~   81 (327)
                      ++|+|||||||||||++++++|+++ |++|++++|+ +.....   +..    ..+++++.+|++|.++ +.++++++|+
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~-~~~~~~---~~~----~~~v~~v~~Dl~d~~~~~~~~~~~~D~  385 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG-SDAISR---FLN----HPHFHFVEGDISIHSEWIEYHVKKCDV  385 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESC-CTTTGG---GTT----CTTEEEEECCTTTCHHHHHHHHHHCSE
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcC-chhhhh---hcc----CCceEEEECCCCCcHHHHHHhhcCCCE
Confidence            3578999999999999999999998 8999999994 332221   111    2578999999999765 7778889999


Q ss_pred             EEEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           82 VIHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        82 vih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |||+||.....  ..++. +.+++|+.++.+++++|++.+  ++|||+||.++|+  .....+++|+++...  ..+...
T Consensus       386 Vih~Aa~~~~~~~~~~~~-~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg--~~~~~~~~E~~~~~~--~~p~~~  458 (660)
T 1z7e_A          386 VLPLVAIATPIEYTRNPL-RVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYG--MCSDKYFDEDHSNLI--VGPVNK  458 (660)
T ss_dssp             EEECCCCCCTHHHHHSHH-HHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGB--TCCSSSBCTTTCCEE--ECCTTC
T ss_pred             EEECceecCccccccCHH-HHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcC--CCCCcccCCCccccc--cCcccC
Confidence            99999975421  22333 789999999999999999876  8999999999986  334557888875210  001124


Q ss_pred             CchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC------CCchHHHHHHH-HhCCcccccc-ccC-CCee
Q 020334          160 WGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK------FAGSVRSTLAM-VLGNREEYSI-LLN-ISMV  230 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~------~~~~~~~~~~~-~~~~~~~~~~-~~~-~~~i  230 (327)
                      |.+.|+.+|..+|.+++.++++.+++++++||+++|||+....      ....+..+... ..+.+..+.. +.+ ++|+
T Consensus       459 p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i  538 (660)
T 1z7e_A          459 PRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFT  538 (660)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECE
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEE
Confidence            5678999999999999999888899999999999999986420      12334444333 3444433332 223 7999


Q ss_pred             eHHHHHHHHHHhhcCCC---CCceEEEec-c-ccCHHHHHHHHHHhCCCC----CCCCCCCCc----------ccccccc
Q 020334          231 HIDDVARAHIFLLEYPD---AKGRYICSS-A-KLTIQEMAEFLSAKHPEY----PIPNVDSLS----------EIEGYKL  291 (327)
Q Consensus       231 ~v~D~a~~~~~~~~~~~---~~~~y~~~~-~-~~s~~e~~~~i~~~~~~~----~~~~~~~~~----------~~~~~~~  291 (327)
                      |++|+|++++.+++++.   .+++||+++ + .+|+.|+++.+.+.+|..    .+|.+....          .......
T Consensus       539 ~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  618 (660)
T 1z7e_A          539 DIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEH  618 (660)
T ss_dssp             EHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSC
T ss_pred             EHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchhh
Confidence            99999999999998764   456899754 4 799999999999876621    122210000          0012345


Q ss_pred             cccChHHH-HhccccccccHHHHHHHHHHHHHHcC
Q 020334          292 SALSSKKL-LDICFTYKYGIDEMFDGAIKCCKERG  325 (327)
Q Consensus       292 ~~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~~  325 (327)
                      ..+|++|+ +.|||+|+++++++|+++++||+++.
T Consensus       619 ~~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~  653 (660)
T 1z7e_A          619 RKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTV  653 (660)
T ss_dssp             CCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTS
T ss_pred             cccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhc
Confidence            67899999 78999998899999999999998765

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=5.1e-39  Score=277.74  Aligned_cols=273  Identities=20%  Similarity=0.163  Sum_probs=200.4

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      |||||||||||||++|+++|+++||+|++++| ++...              .+   ..|    +...+.++++|+|||+
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R-~~~~~--------------~~---~~~----~~~~~~l~~~d~vihl   58 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSR-KPGPG--------------RI---TWD----ELAASGLPSCDAAVNL   58 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SCCTT--------------EE---EHH----HHHHHCCCSCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CCCcC--------------ee---ecc----hhhHhhccCCCEEEEe
Confidence            57999999999999999999999999999999 43221              11   111    2234556789999999


Q ss_pred             cCCCCC-----CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           86 AAPIDI-----DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        86 a~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |+....     +.......+++.|+.++.+|+++++..+ ..++||+.||+++|+  +....+++|+++         ..
T Consensus        59 a~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg--~~~~~~~~E~~p---------~~  127 (298)
T 4b4o_A           59 AGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQ--PSLTAEYDEDSP---------GG  127 (298)
T ss_dssp             CCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSC--CCSSCCBCTTCC---------CS
T ss_pred             ccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeec--CCCCCcccccCC---------cc
Confidence            974321     1223334778999999999999998876 245699999999985  566778888886         24


Q ss_pred             CchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHH-HhCCccccccccC-CCeeeHHHHHH
Q 020334          160 WGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAM-VLGNREEYSILLN-ISMVHIDDVAR  237 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~i~v~D~a~  237 (327)
                      +.+.|+..|...|...  .....+++++++||+.||||+.     ..+..+... ..+....++.+.+ ++|||++|+|+
T Consensus       128 ~~~~~~~~~~~~e~~~--~~~~~~~~~~~~r~~~v~g~~~-----~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~  200 (298)
T 4b4o_A          128 DFDFFSNLVTKWEAAA--RLPGDSTRQVVVRSGVVLGRGG-----GAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAG  200 (298)
T ss_dssp             CSSHHHHHHHHHHHHH--CCSSSSSEEEEEEECEEECTTS-----HHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHH
T ss_pred             ccchhHHHHHHHHHHH--HhhccCCceeeeeeeeEEcCCC-----CchhHHHHHHhcCCcceecccCceeecCcHHHHHH
Confidence            5566777777776543  2234689999999999999963     233333333 2344444554444 89999999999


Q ss_pred             HHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCC---CCCCCCCCccc--c------cccccccChHHHHhcccc
Q 020334          238 AHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEY---PIPNVDSLSEI--E------GYKLSALSSKKLLDICFT  305 (327)
Q Consensus       238 ~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~---~~~~~~~~~~~--~------~~~~~~~d~~k~~~lg~~  305 (327)
                      +++.+++++...|+||+ +++++|++|+++.+++.++..   ++|.+  ..+.  .      ...+..++++|++++||+
T Consensus       201 a~~~~~~~~~~~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~pvP~~--~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf~  278 (298)
T 4b4o_A          201 ILTHALEANHVHGVLNGVAPSSATNAEFAQTFGAALGRRAFIPLPSA--VVQAVFGRQRAIMLLEGQKVIPRRTLATGYQ  278 (298)
T ss_dssp             HHHHHHHCTTCCEEEEESCSCCCBHHHHHHHHHHHHTCCCCCCBCHH--HHHHHHCHHHHHHHHCCCCBCCHHHHHTTCC
T ss_pred             HHHHHHhCCCCCCeEEEECCCccCHHHHHHHHHHHhCcCCcccCCHH--HHHHHhcchhHHHhhCCCEEcHHHHHHCCCC
Confidence            99999999888899996 678899999999999988832   22210  0010  0      013456788999999999


Q ss_pred             ccc-cHHHHHHHHHHH
Q 020334          306 YKY-GIDEMFDGAIKC  320 (327)
Q Consensus       306 p~~-~~~~~l~~~~~~  320 (327)
                      +++ +++++|+++++.
T Consensus       279 f~yp~l~~al~~l~~~  294 (298)
T 4b4o_A          279 YSFPELGAALKEIAEN  294 (298)
T ss_dssp             CSCCSHHHHHHHHHHC
T ss_pred             CCCCCHHHHHHHHHHh
Confidence            999 799999999884

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=3.2e-38  Score=291.98  Aligned_cols=280  Identities=14%  Similarity=0.108  Sum_probs=202.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +|+|||||||||||++|+++|+++|++|++++| ++...                ..+.+|+.+.  +.+++.++|+|||
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R-~~~~~----------------~~v~~d~~~~--~~~~l~~~D~Vih  207 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVR-KEPKP----------------GKRFWDPLNP--ASDLLDGADVLVH  207 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-SSCCT----------------TCEECCTTSC--CTTTTTTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CCCCc----------------cceeecccch--hHHhcCCCCEEEE
Confidence            578999999999999999999999999999999 43221                1255777653  3556778999999


Q ss_pred             ccCCCCC--CCCchHHHHHHHHHhHHHHHHHH-HHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           85 VAAPIDI--DGKETEEVMTQRAVNGTIGILKS-CLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        85 ~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~-~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      ||+....  ........++++|+.++.+|+++ ++..+ +++|||+||+++|+. .....+++|+++          .+.
T Consensus       208 ~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~SS~~vyg~-~~~~~~~~E~~~----------~~~  275 (516)
T 3oh8_A          208 LAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQ-CTTMISASAVGFYGH-DRGDEILTEESE----------SGD  275 (516)
T ss_dssp             CCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSS-CCEEEEEEEGGGGCS-EEEEEEECTTSC----------CCS
T ss_pred             CCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCcceEecC-CCCCCccCCCCC----------CCc
Confidence            9997532  12233347899999999999999 55555 899999999999962 234567888885          356


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHh-CCccccccccC-CCeeeHHHHHHHH
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVL-GNREEYSILLN-ISMVHIDDVARAH  239 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~i~v~D~a~~~  239 (327)
                      +.|+.+|...|..+... ++.|++++++||+++|||+.     ..+..+..... +....++.+.+ ++|+|++|+|+++
T Consensus       276 ~~y~~~~~~~E~~~~~~-~~~gi~~~ilRp~~v~Gp~~-----~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai  349 (516)
T 3oh8_A          276 DFLAEVCRDWEHATAPA-SDAGKRVAFIRTGVALSGRG-----GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIY  349 (516)
T ss_dssp             SHHHHHHHHHHHTTHHH-HHTTCEEEEEEECEEEBTTB-----SHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHH-HhCCCCEEEEEeeEEECCCC-----ChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHH
Confidence            78999999999876544 45799999999999999973     23333333222 22223333333 7999999999999


Q ss_pred             HHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCC---CCCCCCCCC---ccc----ccccccccChHHHHhccccccc
Q 020334          240 IFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPE---YPIPNVDSL---SEI----EGYKLSALSSKKLLDICFTYKY  308 (327)
Q Consensus       240 ~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~---~~~~~~~~~---~~~----~~~~~~~~d~~k~~~lg~~p~~  308 (327)
                      +.+++++..+|+||+ +++.+|+.|+++.+++.+|.   .++|.+...   .+.    .......++++|++.|||+|++
T Consensus       350 ~~~l~~~~~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~  429 (516)
T 3oh8_A          350 YRAIVDAQISGPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRY  429 (516)
T ss_dssp             HHHHHCTTCCEEEEESCSCCEEHHHHHHHTTC---------------------CCGGGGGGCEEEECCHHHHHTTCCCSC
T ss_pred             HHHHhCcccCCcEEEECCCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCC
Confidence            999998877889986 66789999999999998772   122221100   000    1123456789999889999999


Q ss_pred             c-HHHHHHHHHHHH
Q 020334          309 G-IDEMFDGAIKCC  321 (327)
Q Consensus       309 ~-~~~~l~~~~~~~  321 (327)
                      + |+++|+++++..
T Consensus       430 ~~l~e~l~~~l~~~  443 (516)
T 3oh8_A          430 TDIGAAIAHELGYE  443 (516)
T ss_dssp             SSHHHHHHHHHTCC
T ss_pred             CCHHHHHHHHhCcc
Confidence            6 999999998753

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=4.5e-37  Score=278.55  Aligned_cols=304  Identities=16%  Similarity=0.174  Sum_probs=213.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhC----C------CCCCCCeEEEeCCCCChhHHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTN----L------PGASERLQIFNADLNDPESFDA   74 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~------~~~~~~~~~~~~D~~d~~~~~~   74 (327)
                      +|+|||||||||||++++++|++.|++|++++| ++........+..    .      .....+++++.+|+.|++.+. 
T Consensus        69 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  146 (427)
T 4f6c_A           69 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIR-ADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  146 (427)
T ss_dssp             CEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEE-CSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-
T ss_pred             CCEEEEecCCcHHHHHHHHHHHcCCCEEEEEEC-CCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-
Confidence            578999999999999999999999999999999 4432111111100    0      000257899999999988777 


Q ss_pred             HhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecccee--eeecCCCCCcccCCCCCChh
Q 020334           75 AIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGST--VYFSGKDVDMLDETFWSDED  152 (327)
Q Consensus        75 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v--~~~~~~~~~~~~E~~~~~~~  152 (327)
                      .+.++|+||||||..... ..+ ...+++|+.++.+++++|++ + .++|||+||..+  +........+++|+++..  
T Consensus       147 ~~~~~d~Vih~A~~~~~~-~~~-~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~--  220 (427)
T 4f6c_A          147 LPENMDTIIHAGARTDHF-GDD-DEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEADVYK--  220 (427)
T ss_dssp             CSSCCSEEEECCCCC---------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGGGSEECSSCSCCEECTTCSCS--
T ss_pred             CcCCCCEEEECCcccCCC-CCH-HHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHhCCCccCCCCCcccccccccc--
Confidence            667899999999976532 233 37899999999999999999 5 799999999988  222234567888888531  


Q ss_pred             HhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC-----chHHHHHHHH-hCCcccccccc-
Q 020334          153 YIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA-----GSVRSTLAMV-LGNREEYSILL-  225 (327)
Q Consensus       153 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~-  225 (327)
                          ...+.+.|+.+|+.+|.+++.+++ .|++++++||++||||.....+.     ..+..++... .........+. 
T Consensus       221 ----~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (427)
T 4f6c_A          221 ----GQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEM  295 (427)
T ss_dssp             ----SCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTC
T ss_pred             ----CCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccc
Confidence                123678999999999999999865 69999999999999998654321     2243444433 33333332222 


Q ss_pred             CCCeeeHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCc---------c---c----cc
Q 020334          226 NISMVHIDDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLS---------E---I----EG  288 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~---------~---~----~~  288 (327)
                      .++|+|++|+|++++.++..+..+++||+ +++++|+.|+++.+++ ++ ........+.         +   +    ..
T Consensus       296 ~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  373 (427)
T 4f6c_A          296 PVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE-IELVSDESFNEILQKQDMYETIGLTSVDRE  373 (427)
T ss_dssp             EECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC-CEEECHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred             eEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC-CcccCHHHHHHHHHhcCchhhhhhhhcccc
Confidence            37999999999999999988776779997 5678999999999998 45 1111100000         0   0    01


Q ss_pred             ccccccChHHH----HhccccccccHHHHHHHHHHHHHH
Q 020334          289 YKLSALSSKKL----LDICFTYKYGIDEMFDGAIKCCKE  323 (327)
Q Consensus       289 ~~~~~~d~~k~----~~lg~~p~~~~~~~l~~~~~~~~~  323 (327)
                      .....+|+++.    +.+||.+...-++.++++++++++
T Consensus       374 ~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~  412 (427)
T 4f6c_A          374 QQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKT  412 (427)
T ss_dssp             SEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHH
T ss_pred             CCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence            12456676665    667999885556689999988875

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=2.4e-36  Score=250.69  Aligned_cols=224  Identities=23%  Similarity=0.271  Sum_probs=171.1

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      |+. ||+|||||||||||++++++|+++|++|++++| ++.....+         ..+++++.+|++|++++.++++++|
T Consensus         1 M~~-m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~d   69 (227)
T 3dhn_A            1 MEK-VKKIVLIGASGFVGSALLNEALNRGFEVTAVVR-HPEKIKIE---------NEHLKVKKADVSSLDEVCEVCKGAD   69 (227)
T ss_dssp             --C-CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECS-CGGGCCCC---------CTTEEEECCCTTCHHHHHHHHTTCS
T ss_pred             CCC-CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEc-Ccccchhc---------cCceEEEEecCCCHHHHHHHhcCCC
Confidence            653 578999999999999999999999999999999 43332211         2578999999999999999999999


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      +|||+|+....    .. +.++.|+.++.++++++++.+ +++|||+||..+|+..+   ....|+++         ..|
T Consensus        70 ~vi~~a~~~~~----~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~---~~~~~~~~---------~~p  131 (227)
T 3dhn_A           70 AVISAFNPGWN----NP-DIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAP---GLRLMDSG---------EVP  131 (227)
T ss_dssp             EEEECCCC-----------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEET---TEEGGGTT---------CSC
T ss_pred             EEEEeCcCCCC----Ch-hHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCCC---CCccccCC---------cch
Confidence            99999986421    11 467889999999999999988 89999999998875332   12233332         256


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHH
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI  240 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  240 (327)
                      .+.|+.+|..+|.+++.++++.+++++++||+.+|||+.......         .+....+.....++|+|++|+|++++
T Consensus       132 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~Dva~ai~  202 (227)
T 3dhn_A          132 ENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYR---------LGKDDMIVDIVGNSHISVEDYAAAMI  202 (227)
T ss_dssp             GGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCE---------EESSBCCCCTTSCCEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCcccccee---------ecCCCcccCCCCCcEEeHHHHHHHHH
Confidence            788999999999999998877899999999999999976432111         12233333333489999999999999


Q ss_pred             HhhcCCCC-CceEEE-eccccCHH
Q 020334          241 FLLEYPDA-KGRYIC-SSAKLTIQ  262 (327)
Q Consensus       241 ~~~~~~~~-~~~y~~-~~~~~s~~  262 (327)
                      .+++++.. +++|++ ++++.++.
T Consensus       203 ~~l~~~~~~g~~~~~~~~~~~~~~  226 (227)
T 3dhn_A          203 DELEHPKHHQERFTIGYLEHHHHH  226 (227)
T ss_dssp             HHHHSCCCCSEEEEEECCSCCC--
T ss_pred             HHHhCccccCcEEEEEeehhcccC
Confidence            99999875 558886 55666654

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=1.9e-36  Score=258.36  Aligned_cols=262  Identities=19%  Similarity=0.101  Sum_probs=197.0

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC--CCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG--CAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi   83 (327)
                      |+|||||||||||++++++|++ |++|++++| ++...             .+   +.+|++|++++.+++++  +|+||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r-~~~~~-------------~~---~~~Dl~~~~~~~~~~~~~~~d~vi   62 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYN-SSEIQ-------------GG---YKLDLTDFPRLEDFIIKKRPDVII   62 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEES-SSCCT-------------TC---EECCTTSHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecC-CCcCC-------------CC---ceeccCCHHHHHHHHHhcCCCEEE
Confidence            3699999999999999999995 899999999 43210             12   78999999999998875  99999


Q ss_pred             EccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           84 HVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        84 h~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      ||||.....  ..++. ..+++|+.++.++++++++.+ . +|||+||..+|+..   ..+++|+++         ..|.
T Consensus        63 ~~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~---~~~~~e~~~---------~~~~  127 (273)
T 2ggs_A           63 NAAAMTDVDKCEIEKE-KAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGE---KGNYKEEDI---------PNPI  127 (273)
T ss_dssp             ECCCCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSS---SCSBCTTSC---------CCCS
T ss_pred             ECCcccChhhhhhCHH-HHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCC---CCCcCCCCC---------CCCC
Confidence            999975421  22344 889999999999999999877 5 99999999998522   237888875         2456


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHH-hCCccccccccCCCeeeHHHHHHHHH
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-LGNREEYSILLNISMVHIDDVARAHI  240 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~~~~  240 (327)
                      +.|+.+|..+|.+++.      ++++++||+.+||+      ......+.... .+........ .++++|++|+|++++
T Consensus       128 ~~Y~~sK~~~e~~~~~------~~~~~iR~~~v~G~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~  194 (273)
T 2ggs_A          128 NYYGLSKLLGETFALQ------DDSLIIRTSGIFRN------KGFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAIL  194 (273)
T ss_dssp             SHHHHHHHHHHHHHCC------TTCEEEEECCCBSS------SSHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhC------CCeEEEeccccccc------cHHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHH
Confidence            7899999999998865      67899999999983      12333333332 3333322222 468999999999999


Q ss_pred             HhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCC-CCCCCCCCccc--ccccccccChHHH-Hhccccc-cccHHHHH
Q 020334          241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEY-PIPNVDSLSEI--EGYKLSALSSKKL-LDICFTY-KYGIDEMF  314 (327)
Q Consensus       241 ~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~~~~~~-~~~~~~~~~~~--~~~~~~~~d~~k~-~~lg~~p-~~~~~~~l  314 (327)
                      .+++++. +++||++++.+|+.|+++.+.+.+|.. ...........  .......+|++|+ +.|||+| .+++++++
T Consensus       195 ~~~~~~~-~g~~~i~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~  272 (273)
T 2ggs_A          195 ELLELRK-TGIIHVAGERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV  272 (273)
T ss_dssp             HHHHHTC-CEEEECCCCCEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred             HHHhcCc-CCeEEECCCcccHHHHHHHHHHHhCCChhhcccccccccccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence            9998764 679997668899999999999998832 11100001011  2345678999999 7799999 57998875

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=100.00  E-value=1e-36  Score=281.94  Aligned_cols=304  Identities=16%  Similarity=0.187  Sum_probs=215.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhh----hCC------CCCCCCeEEEeCCCCChhHHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFL----TNL------PGASERLQIFNADLNDPESFDA   74 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~------~~~~~~~~~~~~D~~d~~~~~~   74 (327)
                      +|+|||||||||||++|+++|.+.|++|++++| .+........+    ...      .....+++++.+|+.|++.+. 
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R-~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIR-ADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEE-SSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEEC-CCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            578999999999999999999999999999999 44321111111    000      000258999999999987777 


Q ss_pred             HhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecccee--eeecCCCCCcccCCCCCChh
Q 020334           75 AIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGST--VYFSGKDVDMLDETFWSDED  152 (327)
Q Consensus        75 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v--~~~~~~~~~~~~E~~~~~~~  152 (327)
                      ++.++|+|||||+.....  .....+++.|+.++.+++++|++ + .++|||+||.++  |........+++|+++... 
T Consensus       228 ~~~~~D~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~-  302 (508)
T 4f6l_B          228 LPENMDTIIHAGARTDHF--GDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEADVYKG-  302 (508)
T ss_dssp             CSSCCSEEEECCCC----------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCTTSEECTTCSCCEECTTCSCSS-
T ss_pred             CccCCCEEEECCceecCC--CCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhhccCCccCCcCccccccccccc-
Confidence            667899999999976532  22337789999999999999998 4 699999999998  3323345678888875311 


Q ss_pred             HhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC-----CchHHHHHHHHhCCc-ccccccc-
Q 020334          153 YIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKF-----AGSVRSTLAMVLGNR-EEYSILL-  225 (327)
Q Consensus       153 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~-  225 (327)
                           ..+.+.|+.+|+.+|.+++.+++ .|++++++||+.||||.....+     ...+..++......+ .....+. 
T Consensus       303 -----~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~  376 (508)
T 4f6l_B          303 -----QLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEM  376 (508)
T ss_dssp             -----BCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGS
T ss_pred             -----ccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCc
Confidence                 23678999999999999999865 6999999999999999865432     122444444443333 3332222 


Q ss_pred             CCCeeeHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCC---------Cccc-------cc
Q 020334          226 NISMVHIDDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDS---------LSEI-------EG  288 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~---------~~~~-------~~  288 (327)
                      .++|+|++|+|++++.++.++..+++||+ +++.+|+.|+++.+.+..  ........         ..+.       ..
T Consensus       377 ~~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~--~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~  454 (508)
T 4f6l_B          377 PVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE--IELVSDESFNEILQKQDMYETIGLTSVDRE  454 (508)
T ss_dssp             EEECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC--CEEECHHHHHHHHHTTCCHHHHHHHHTGGG
T ss_pred             eEEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC--CcccCHHHHHHHHHhcCCccchhccccccc
Confidence            37999999999999999988777789997 567899999999998754  11100000         0000       01


Q ss_pred             ccccccChHHH----HhccccccccHHHHHHHHHHHHHH
Q 020334          289 YKLSALSSKKL----LDICFTYKYGIDEMFDGAIKCCKE  323 (327)
Q Consensus       289 ~~~~~~d~~k~----~~lg~~p~~~~~~~l~~~~~~~~~  323 (327)
                      .....+|+++.    +++||.+...-++.++++++|+++
T Consensus       455 ~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~  493 (508)
T 4f6l_B          455 QQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKT  493 (508)
T ss_dssp             SEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHH
T ss_pred             CcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Confidence            22455666664    678999886668889999888875

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=100.00  E-value=7.3e-36  Score=253.89  Aligned_cols=237  Identities=16%  Similarity=0.127  Sum_probs=187.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      |||+|||||||||||++++++|+++|++|++++| ++....           ..+++++.+|++|++.+.++++++|+||
T Consensus         1 M~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   68 (267)
T 3ay3_A            1 MLNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDI-VDLGAA-----------EAHEEIVACDLADAQAVHDLVKDCDGII   68 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHGGGGGGTEEEEEECCS-SCCCCC-----------CTTEEECCCCTTCHHHHHHHHTTCSEEE
T ss_pred             CCceEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-CCcccc-----------CCCccEEEccCCCHHHHHHHHcCCCEEE
Confidence            4678999999999999999999999999999999 432211           1367899999999999999999999999


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchh
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS  163 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  163 (327)
                      |+|+...  ...+. ..+++|+.++.++++++++.+ +++|||+||..+|+. .....+++|+++         ..|.++
T Consensus        69 ~~a~~~~--~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~-~~~~~~~~E~~~---------~~~~~~  134 (267)
T 3ay3_A           69 HLGGVSV--ERPWN-DILQANIIGAYNLYEAARNLG-KPRIVFASSNHTIGY-YPRTTRIDTEVP---------RRPDSL  134 (267)
T ss_dssp             ECCSCCS--CCCHH-HHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGSTT-SBTTSCBCTTSC---------CCCCSH
T ss_pred             ECCcCCC--CCCHH-HHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCC-CCCCCCCCCCCC---------CCCCCh
Confidence            9999752  23343 889999999999999999887 889999999999862 233567888875         355678


Q ss_pred             hHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhh
Q 020334          164 YVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLL  243 (327)
Q Consensus       164 Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  243 (327)
                      |+.+|..+|.+++.+.++.+++++++||+.+|+...     .            ..     ..++++|++|+|++++.++
T Consensus       135 Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~-----~------------~~-----~~~~~~~~~dva~~~~~~~  192 (267)
T 3ay3_A          135 YGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKPK-----D------------AR-----MMATWLSVDDFMRLMKRAF  192 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSSCC-----S------------HH-----HHHHBCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCCCC-----C------------CC-----eeeccccHHHHHHHHHHHH
Confidence            999999999999998887899999999999994310     0            00     0137999999999999999


Q ss_pred             cCCCCC-ceEEEeccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHHHhccccccccHHHHHHHHHH
Q 020334          244 EYPDAK-GRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAIK  319 (327)
Q Consensus       244 ~~~~~~-~~y~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~  319 (327)
                      +++..+ ++|++.+..                               .....|..+++.|||+|+++++++++++.+
T Consensus       193 ~~~~~~~~~~~~~~~~-------------------------------~~~~~d~~~~~~lg~~p~~~~~~~~~~~~~  238 (267)
T 3ay3_A          193 VAPKLGCTVVYGASAN-------------------------------TESWWDNDKSAFLGWVPQDSSEIWREEIEQ  238 (267)
T ss_dssp             HSSCCCEEEEEECCSC-------------------------------SSCCBCCGGGGGGCCCCCCCGGGGHHHHHH
T ss_pred             hCCCCCceeEecCCCc-------------------------------cccccCHHHHHHcCCCCCCCHHHHHHHHHh
Confidence            887553 466653211                               011234444467899999999999998875

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.4e-35  Score=270.32  Aligned_cols=259  Identities=17%  Similarity=0.196  Sum_probs=190.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHC---CCeEEEEEcCCCCCcchhhhhhCCCC-------------CCCCeEEEeCCCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDH---GYFVTTTVRSDPEHKKDLSFLTNLPG-------------ASERLQIFNADLN   67 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~   67 (327)
                      .+|+|||||||||||++++++|+++   |++|++++| +.........+.....             ...+++++.+|++
T Consensus        72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVR-AESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEEC-SSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEEC-CCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            3689999999999999999999998   899999999 4433222222111100             0258999999998


Q ss_pred             ------ChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCC
Q 020334           68 ------DPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVD  141 (327)
Q Consensus        68 ------d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~  141 (327)
                            |.+.+.++++++|+|||||+....  ..+. +.+++|+.++.+++++|++.+ +++|||+||.++|+  .....
T Consensus       151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~~-~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~~--~~~~~  224 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNA--FPYH-ELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGA--AIEPS  224 (478)
T ss_dssp             SGGGGCCHHHHHHHHHHCCEEEECCSSCSB--SSCC-EEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGGT--TSCTT
T ss_pred             CcccCCCHHHHHHHHcCCCEEEECccccCC--cCHH-HHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhcC--ccCCC
Confidence                  667888899999999999998765  3333 778999999999999999987 88999999999885  34556


Q ss_pred             cccCCCCCChhHhhh----cCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCC---CCCchHHHHHHHH
Q 020334          142 MLDETFWSDEDYIRK----LDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICP---KFAGSVRSTLAMV  214 (327)
Q Consensus       142 ~~~E~~~~~~~~~~~----~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~---~~~~~~~~~~~~~  214 (327)
                      +++|+++..  ...+    .....+.|+.+|+.+|.+++.++++.+++++++||++|||+....   ....++..++...
T Consensus       225 ~~~E~~~~~--p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~  302 (478)
T 4dqv_A          225 AFTEDADIR--VISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSL  302 (478)
T ss_dssp             TCCSSSCHH--HHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHH
T ss_pred             CcCCccccc--ccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHH
Confidence            778876421  1000    001135699999999999999998789999999999999986522   1233444444332


Q ss_pred             hCCc-c--ccc-c-------ccCCCeeeHHHHHHHHHHhhcC-----CCCCceEEE-eccc--cCHHHHHHHHHHh
Q 020334          215 LGNR-E--EYS-I-------LLNISMVHIDDVARAHIFLLEY-----PDAKGRYIC-SSAK--LTIQEMAEFLSAK  271 (327)
Q Consensus       215 ~~~~-~--~~~-~-------~~~~~~i~v~D~a~~~~~~~~~-----~~~~~~y~~-~~~~--~s~~e~~~~i~~~  271 (327)
                      ...+ .  .+. .       ...++++|++|+|++++.++.+     ...+++||+ +++.  +|+.|+++.+.+.
T Consensus       303 ~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~  378 (478)
T 4dqv_A          303 MATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA  378 (478)
T ss_dssp             HHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred             HHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence            2211 1  111 1       1237999999999999999875     234568997 4555  9999999999985

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=100.00  E-value=4.4e-35  Score=257.65  Aligned_cols=232  Identities=17%  Similarity=0.217  Sum_probs=184.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      +|+|||||||||||++++++|+++ |+ +|++++| ++.....+.....    ..+++++.+|++|.+.+.++++++|+|
T Consensus        21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r-~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~~~~~D~V   95 (344)
T 2gn4_A           21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR-DELKQSEMAMEFN----DPRMRFFIGDVRDLERLNYALEGVDIC   95 (344)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEES-CHHHHHHHHHHHC----CTTEEEEECCTTCHHHHHHHTTTCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEEC-ChhhHHHHHHHhc----CCCEEEEECCCCCHHHHHHHHhcCCEE
Confidence            579999999999999999999999 97 9999999 4332222211111    147899999999999999999999999


Q ss_pred             EEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           83 IHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        83 ih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      ||+||....  ....+. +.+++|+.++.++++++++.+ +++||++||..++                         .|
T Consensus        96 ih~Aa~~~~~~~~~~~~-~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~~-------------------------~p  148 (344)
T 2gn4_A           96 IHAAALKHVPIAEYNPL-ECIKTNIMGASNVINACLKNA-ISQVIALSTDKAA-------------------------NP  148 (344)
T ss_dssp             EECCCCCCHHHHHHSHH-HHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGS-------------------------SC
T ss_pred             EECCCCCCCCchhcCHH-HHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCccC-------------------------CC
Confidence            999997542  112333 889999999999999999988 8999999997654                         23


Q ss_pred             chhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHH-hCC-ccccccccC-CCeeeHHH
Q 020334          161 GKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-LGN-REEYSILLN-ISMVHIDD  234 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~-~~~i~v~D  234 (327)
                      .++|+.+|..+|.+++.++++   .+++++++||+++|||..     ..+..+.... .+. +..+..... ++|+|++|
T Consensus       149 ~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~-----~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D  223 (344)
T 2gn4_A          149 INLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG-----SVVPFFKKLVQNKASEIPITDIRMTRFWITLDE  223 (344)
T ss_dssp             CSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT-----SHHHHHHHHHHHTCCCEEESCTTCEEEEECHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC-----CHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHH
Confidence            567999999999999988754   479999999999999863     3444444433 344 344443333 78999999


Q ss_pred             HHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCC
Q 020334          235 VARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       235 ~a~~~~~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~~~~  273 (327)
                      +|++++.+++++..+.+|+++++.+|+.|+++.+.+.++
T Consensus       224 ~a~~v~~~l~~~~~g~~~~~~~~~~s~~el~~~i~~~~~  262 (344)
T 2gn4_A          224 GVSFVLKSLKRMHGGEIFVPKIPSMKMTDLAKALAPNTP  262 (344)
T ss_dssp             HHHHHHHHHHHCCSSCEEEECCCEEEHHHHHHHHCTTCC
T ss_pred             HHHHHHHHHhhccCCCEEecCCCcEEHHHHHHHHHHhCC
Confidence            999999999887656689987778999999999987654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=8e-35  Score=250.07  Aligned_cols=256  Identities=20%  Similarity=0.232  Sum_probs=190.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHC--CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDH--GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      |+|||||||||||++++++|+++  |++|++++| ++.....+.        ..+++++.+|++|++++.++++++|+||
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r-~~~~~~~l~--------~~~~~~~~~D~~d~~~l~~~~~~~d~vi   71 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR-NVEKASTLA--------DQGVEVRHGDYNQPESLQKAFAGVSKLL   71 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEES-CTTTTHHHH--------HTTCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEc-CHHHHhHHh--------hcCCeEEEeccCCHHHHHHHHhcCCEEE
Confidence            47999999999999999999998  999999999 443322221        1367899999999999999999999999


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchh
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS  163 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  163 (327)
                      |+|+.. .     . .  +.|+.++.++++++++.+ +++|||+||.+++.                        . ..+
T Consensus        72 ~~a~~~-~-----~-~--~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~------------------------~-~~~  116 (287)
T 2jl1_A           72 FISGPH-Y-----D-N--TLLIVQHANVVKAARDAG-VKHIAYTGYAFAEE------------------------S-IIP  116 (287)
T ss_dssp             ECCCCC-S-----C-H--HHHHHHHHHHHHHHHHTT-CSEEEEEEETTGGG------------------------C-CST
T ss_pred             EcCCCC-c-----C-c--hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCCC------------------------C-CCc
Confidence            999852 1     1 1  579999999999999988 89999999987641                        0 125


Q ss_pred             hHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc-ccCCCeeeHHHHHHHHHHh
Q 020334          164 YVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI-LLNISMVHIDDVARAHIFL  242 (327)
Q Consensus       164 Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~D~a~~~~~~  242 (327)
                      |+.+|..+|.+++    +.+++++++||+.++|+..    ...+....   ......... ...++|+|++|+|++++.+
T Consensus       117 y~~~K~~~E~~~~----~~~~~~~ilrp~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  185 (287)
T 2jl1_A          117 LAHVHLATEYAIR----TTNIPYTFLRNALYTDFFV----NEGLRAST---ESGAIVTNAGSGIVNSVTRNELALAAATV  185 (287)
T ss_dssp             HHHHHHHHHHHHH----HTTCCEEEEEECCBHHHHS----SGGGHHHH---HHTEEEESCTTCCBCCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHH----HcCCCeEEEECCEeccccc----hhhHHHHh---hCCceeccCCCCccCccCHHHHHHHHHHH
Confidence            9999999999885    3689999999998888642    22222222   122222322 2337999999999999999


Q ss_pred             hcCCC-CCceEEEe-ccccCHHHHHHHHHHhCCCCCCCCCC-CCcc---------cc--------------cccccccCh
Q 020334          243 LEYPD-AKGRYICS-SAKLTIQEMAEFLSAKHPEYPIPNVD-SLSE---------IE--------------GYKLSALSS  296 (327)
Q Consensus       243 ~~~~~-~~~~y~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~-~~~~---------~~--------------~~~~~~~d~  296 (327)
                      ++++. .+++||++ ++.+|+.|+++.+.+.+|. +.+... +...         ..              .......|+
T Consensus       186 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (287)
T 2jl1_A          186 LTEEGHENKTYNLVSNQPWTFDELAQILSEVSGK-KVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTS  264 (287)
T ss_dssp             HTSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSS-CCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCC
T ss_pred             hcCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCC-cceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCc
Confidence            98764 45589975 5689999999999998872 111100 0000         00              012356688


Q ss_pred             HHH-HhccccccccHHHHHHHHHH
Q 020334          297 KKL-LDICFTYKYGIDEMFDGAIK  319 (327)
Q Consensus       297 ~k~-~~lg~~p~~~~~~~l~~~~~  319 (327)
                      +|+ +.||  |.++++|+|+++++
T Consensus       265 ~~~~~~lG--~~~~l~e~l~~~~~  286 (287)
T 2jl1_A          265 DDLQKLIG--SLTPLKETVKQALK  286 (287)
T ss_dssp             SHHHHHHS--SCCCHHHHHHHHHT
T ss_pred             hHHHHHhC--CCCCHHHHHHHHhc
Confidence            999 7799  55599999999875

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=100.00  E-value=1.3e-34  Score=248.65  Aligned_cols=257  Identities=16%  Similarity=0.175  Sum_probs=184.5

Q ss_pred             eEEEeCCcchhHHHHHHHHHHC--CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDH--GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +|||||||||||++++++|+++  |++|++++| ++.....+.        ..+++++.+|++|++++.++++++|+|||
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r-~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~d~vi~   71 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVR-NPAKAQALA--------AQGITVRQADYGDEAALTSALQGVEKLLL   71 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEES-CTTTCHHHH--------HTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEc-ChHhhhhhh--------cCCCeEEEcCCCCHHHHHHHHhCCCEEEE
Confidence            5899999999999999999998  999999999 443322221        13678999999999999999999999999


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhh
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSY  164 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  164 (327)
                      +|+...           ..|+.++.+++++|++.+ +++|||+||..+|.                        . ..+|
T Consensus        72 ~a~~~~-----------~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~------------------------~-~~~y  114 (286)
T 2zcu_A           72 ISSSEV-----------GQRAPQHRNVINAAKAAG-VKFIAYTSLLHADT------------------------S-PLGL  114 (286)
T ss_dssp             CC-------------------CHHHHHHHHHHHHT-CCEEEEEEETTTTT------------------------C-CSTT
T ss_pred             eCCCCc-----------hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCCC------------------------C-cchh
Confidence            998521           247889999999999988 89999999987651                        0 1359


Q ss_pred             HhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc-cCCCeeeHHHHHHHHHHhh
Q 020334          165 VLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL-LNISMVHIDDVARAHIFLL  243 (327)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~  243 (327)
                      +.+|..+|.+++.    .+++++++||+.++++..     ..+...   .......++.+ ..++++|++|+|++++.++
T Consensus       115 ~~sK~~~e~~~~~----~~~~~~ilrp~~~~~~~~-----~~~~~~---~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  182 (286)
T 2zcu_A          115 ADEHIETEKMLAD----SGIVYTLLRNGWYSENYL-----ASAPAA---LEHGVFIGAAGDGKIASATRADYAAAAARVI  182 (286)
T ss_dssp             HHHHHHHHHHHHH----HCSEEEEEEECCBHHHHH-----TTHHHH---HHHTEEEESCTTCCBCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH----cCCCeEEEeChHHhhhhH-----HHhHHh---hcCCceeccCCCCccccccHHHHHHHHHHHh
Confidence            9999999998863    589999999987666431     122221   22223333332 2379999999999999999


Q ss_pred             cCCC-CCceEEEec-cccCHHHHHHHHHHhCCC-CC---CCCCC--------CCccc-----------ccccccccChHH
Q 020334          244 EYPD-AKGRYICSS-AKLTIQEMAEFLSAKHPE-YP---IPNVD--------SLSEI-----------EGYKLSALSSKK  298 (327)
Q Consensus       244 ~~~~-~~~~y~~~~-~~~s~~e~~~~i~~~~~~-~~---~~~~~--------~~~~~-----------~~~~~~~~d~~k  298 (327)
                      +++. .+++||+++ +.+|+.|+++.+.+.+|. ..   +|...        ...+.           ........|++|
T Consensus       183 ~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (286)
T 2zcu_A          183 SEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKT  262 (286)
T ss_dssp             HSSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCH
T ss_pred             cCCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchH
Confidence            8754 456899755 589999999999998872 11   11100        00000           001125568889


Q ss_pred             H-HhccccccccHHHHHHHHHHHHH
Q 020334          299 L-LDICFTYKYGIDEMFDGAIKCCK  322 (327)
Q Consensus       299 ~-~~lg~~p~~~~~~~l~~~~~~~~  322 (327)
                      + +.|||.|+ +++|+|+++++||.
T Consensus       263 ~~~~lg~~~~-~~~e~l~~~~~~~~  286 (286)
T 2zcu_A          263 LSKLIGHPTT-TLAESVSHLFNVNN  286 (286)
T ss_dssp             HHHHHTSCCC-CHHHHHHGGGC---
T ss_pred             HHHHhCcCCC-CHHHHHHHHHhhcC
Confidence            9 77998665 99999999999873

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=100.00  E-value=2.5e-33  Score=238.15  Aligned_cols=213  Identities=17%  Similarity=0.160  Sum_probs=175.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      ||+||||||||+||++++++|+++|++|++++| ++....           ..+++++.+|++|++++.++++++|+|||
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r-~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   70 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADL-SPLDPA-----------GPNEECVQCDLADANAVNAMVAGCDGIVH   70 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEES-SCCCCC-----------CTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEec-CCcccc-----------CCCCEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence            678999999999999999999999999999999 432221           25789999999999999999999999999


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhh
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSY  164 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  164 (327)
                      |||...  ...+. +.+++|+.++.++++++++.+ .++|||+||..+|+ ......+++|+.+         ..|.+.|
T Consensus        71 ~Ag~~~--~~~~~-~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g-~~~~~~~~~e~~~---------~~~~~~Y  136 (267)
T 3rft_A           71 LGGISV--EKPFE-QILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIG-YYPQTERLGPDVP---------ARPDGLY  136 (267)
T ss_dssp             CCSCCS--CCCHH-HHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGT-TSBTTSCBCTTSC---------CCCCSHH
T ss_pred             CCCCcC--cCCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhC-CCCCCCCCCCCCC---------CCCCChH
Confidence            999742  23444 889999999999999999887 88999999999986 3344567888875         3567889


Q ss_pred             HhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhc
Q 020334          165 VLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLE  244 (327)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  244 (327)
                      +.||..+|.+++.++++++++++++||+.+||+....   .              ..     ++|+|++|+++++..+++
T Consensus       137 ~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~~---~--------------~~-----~~~~~~~d~a~~~~~~~~  194 (267)
T 3rft_A          137 GVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNNY---R--------------ML-----STWFSHDDFVSLIEAVFR  194 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCST---T--------------HH-----HHBCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCCC---C--------------ce-----eeEEcHHHHHHHHHHHHh
Confidence            9999999999999998899999999999999974221   0              00     268999999999999999


Q ss_pred             CCCCCc-eEE-EeccccCHHHHH
Q 020334          245 YPDAKG-RYI-CSSAKLTIQEMA  265 (327)
Q Consensus       245 ~~~~~~-~y~-~~~~~~s~~e~~  265 (327)
                      .+..++ +++ +++++.++.++.
T Consensus       195 ~~~~~~~~~~~~s~~~~~~~~~~  217 (267)
T 3rft_A          195 APVLGCPVVWGASANDAGWWDNS  217 (267)
T ss_dssp             CSCCCSCEEEECCCCTTCCBCCG
T ss_pred             CCCCCceEEEEeCCCCCCcccCh
Confidence            877654 555 566666665553

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=3.5e-34  Score=236.33  Aligned_cols=208  Identities=19%  Similarity=0.177  Sum_probs=167.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCC-hhHHHHHhcCCCEEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLND-PESFDAAIAGCAGVIH   84 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~d~vih   84 (327)
                      |+|||||||||||++++++|+++|++|++++| ++......          .+++++.+|++| ++++.++++++|+|||
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~----------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~   69 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGAR-KVEQVPQY----------NNVKAVHFDVDWTPEEMAKQLHGMDAIIN   69 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEES-SGGGSCCC----------TTEEEEECCTTSCHHHHHTTTTTCSEEEE
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-Cccchhhc----------CCceEEEecccCCHHHHHHHHcCCCEEEE
Confidence            37999999999999999999999999999999 43322211          478999999999 9999999999999999


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhh
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSY  164 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  164 (327)
                      ||+....       +.+++|+.++.++++++++.+ +++|||+||.+++.     ..+.+| ++         ..|.+.|
T Consensus        70 ~ag~~~~-------~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~-----~~~~~e-~~---------~~~~~~Y  126 (219)
T 3dqp_A           70 VSGSGGK-------SLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQ-----PEKWIG-AG---------FDALKDY  126 (219)
T ss_dssp             CCCCTTS-------SCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTC-----GGGCCS-HH---------HHHTHHH
T ss_pred             CCcCCCC-------CcEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccC-----CCcccc-cc---------cccccHH
Confidence            9997542       356788999999999999987 89999999977653     223344 11         2456789


Q ss_pred             HhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhc
Q 020334          165 VLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLE  244 (327)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  244 (327)
                      +.+|..+|.+++   +..+++++++||+.+||+.......                + ....+++++++|+|++++.+++
T Consensus       127 ~~sK~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~~~~~----------------~-~~~~~~~i~~~Dva~~i~~~l~  186 (219)
T 3dqp_A          127 YIAKHFADLYLT---KETNLDYTIIQPGALTEEEATGLID----------------I-NDEVSASNTIGDVADTIKELVM  186 (219)
T ss_dssp             HHHHHHHHHHHH---HSCCCEEEEEEECSEECSCCCSEEE----------------E-SSSCCCCEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHH---hccCCcEEEEeCceEecCCCCCccc----------------c-CCCcCCcccHHHHHHHHHHHHh
Confidence            999999999987   4579999999999999986432111                0 1233689999999999999999


Q ss_pred             CCCC-CceEEEeccccCHHHHHHH
Q 020334          245 YPDA-KGRYICSSAKLTIQEMAEF  267 (327)
Q Consensus       245 ~~~~-~~~y~~~~~~~s~~e~~~~  267 (327)
                      ++.. +++||++++..+++|+.+.
T Consensus       187 ~~~~~g~~~~i~~g~~~~~e~~~~  210 (219)
T 3dqp_A          187 TDHSIGKVISMHNGKTAIKEALES  210 (219)
T ss_dssp             CGGGTTEEEEEEECSEEHHHHHHT
T ss_pred             CccccCcEEEeCCCCccHHHHHHH
Confidence            8765 5589987667999998864

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=8.1e-33  Score=230.81  Aligned_cols=214  Identities=21%  Similarity=0.235  Sum_probs=166.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCe-EEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERL-QIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ++|+|||||||||||++++++|+++|++|++++| ++.....+.   .     .++ +++.+|++  +.+.+.+.++|+|
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R-~~~~~~~~~---~-----~~~~~~~~~Dl~--~~~~~~~~~~D~v   88 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVR-NEEQGPELR---E-----RGASDIVVANLE--EDFSHAFASIDAV   88 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SGGGHHHHH---H-----TTCSEEEECCTT--SCCGGGGTTCSEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEEC-ChHHHHHHH---h-----CCCceEEEcccH--HHHHHHHcCCCEE
Confidence            4689999999999999999999999999999999 443332222   1     378 99999998  6677888899999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      ||+||....  ..+. ..+++|+.++.++++++++.+ +++||++||...+.   .      |.++          .+.+
T Consensus        89 i~~ag~~~~--~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~---~------~~~~----------~~~~  145 (236)
T 3e8x_A           89 VFAAGSGPH--TGAD-KTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVD---P------DQGP----------MNMR  145 (236)
T ss_dssp             EECCCCCTT--SCHH-HHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSC---G------GGSC----------GGGH
T ss_pred             EECCCCCCC--CCcc-ccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCC---C------CCCh----------hhhh
Confidence            999997543  3444 889999999999999999988 89999999954431   0      1111          2356


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHh
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFL  242 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  242 (327)
                      .|+.+|..+|.+++    +.+++++++||+.++|+........              .....+.++++|++|+|++++.+
T Consensus       146 ~Y~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~~~~~~--------------~~~~~~~~~~i~~~Dva~~~~~~  207 (236)
T 3e8x_A          146 HYLVAKRLADDELK----RSSLDYTIVRPGPLSNEESTGKVTV--------------SPHFSEITRSITRHDVAKVIAEL  207 (236)
T ss_dssp             HHHHHHHHHHHHHH----HSSSEEEEEEECSEECSCCCSEEEE--------------ESSCSCCCCCEEHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCCCeEEe--------------ccCCCcccCcEeHHHHHHHHHHH
Confidence            89999999999886    5799999999999999964321110              00111236899999999999999


Q ss_pred             hcCCC-CCceEEEeccccCHHHHHHHHH
Q 020334          243 LEYPD-AKGRYICSSAKLTIQEMAEFLS  269 (327)
Q Consensus       243 ~~~~~-~~~~y~~~~~~~s~~e~~~~i~  269 (327)
                      ++++. .+++|++.++.+++.|+++.++
T Consensus       208 ~~~~~~~g~~~~v~~~~~~~~e~~~~i~  235 (236)
T 3e8x_A          208 VDQQHTIGKTFEVLNGDTPIAKVVEQLG  235 (236)
T ss_dssp             TTCGGGTTEEEEEEECSEEHHHHHHTC-
T ss_pred             hcCccccCCeEEEeCCCcCHHHHHHHhc
Confidence            99874 4568998666899999998765

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=100.00  E-value=2.2e-33  Score=249.64  Aligned_cols=210  Identities=17%  Similarity=0.179  Sum_probs=175.2

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      |+|||||||||||++|+++|+++|+ +|++++|+                            .|++++.++++++|+|||
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------------------~d~~~l~~~~~~~d~Vih   52 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------------------TKEEELESALLKADFIVH   52 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------------------CCHHHHHHHHHHCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------------------CCHHHHHHHhccCCEEEE
Confidence            4799999999999999999999998 88777661                            678889999999999999


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCcc-EEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchh
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVK-RFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS  163 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  163 (327)
                      +|+.....  .+. +.++.|+.++.++++++++.+ ++ +|||+||..+|+                          .++
T Consensus        53 ~a~~~~~~--~~~-~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~~--------------------------~~~  102 (369)
T 3st7_A           53 LAGVNRPE--HDK-EFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQATQ--------------------------DNP  102 (369)
T ss_dssp             CCCSBCTT--CST-TCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGGS--------------------------CSH
T ss_pred             CCcCCCCC--CHH-HHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhcC--------------------------CCC
Confidence            99976532  333 667889999999999999988 66 999999998873                          346


Q ss_pred             hHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHh-CCccccccccC-CCeeeHHHHHHHHHH
Q 020334          164 YVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVL-GNREEYSILLN-ISMVHIDDVARAHIF  241 (327)
Q Consensus       164 Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~i~v~D~a~~~~~  241 (327)
                      |+.+|..+|++++.++++.+++++++||+++|||+..+.....+..+..... +....+..... ++++|++|+|++++.
T Consensus       103 Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  182 (369)
T 3st7_A          103 YGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKR  182 (369)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHH
Confidence            9999999999999999988999999999999999876654556666655543 44444432333 799999999999999


Q ss_pred             hhcCCCC--CceEEE-eccccCHHHHHHHHHHhCC
Q 020334          242 LLEYPDA--KGRYIC-SSAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       242 ~~~~~~~--~~~y~~-~~~~~s~~e~~~~i~~~~~  273 (327)
                      +++++..  +++||+ +++.+|+.|+++.+++.+|
T Consensus       183 ~l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g  217 (369)
T 3st7_A          183 AIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQ  217 (369)
T ss_dssp             HHHTCCCEETTEECCSCCEEEEHHHHHHHHHHHHH
T ss_pred             HHhCCcccCCceEEeCCCCceeHHHHHHHHHHHhC
Confidence            9998877  679986 4678999999999999876

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=100.00  E-value=2.2e-32  Score=241.06  Aligned_cols=226  Identities=16%  Similarity=0.143  Sum_probs=167.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v   82 (327)
                      +|+|||||||||||++++++|++.|++|++++|+..........+....  ..+++++.+|+.|.+++.++++  ++|+|
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V   87 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE--DKGAIIVYGLINEQEAMEKILKEHEIDIV   87 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH--hCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence            4689999999999999999999999999999994323222222111100  1478999999999999999999  99999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      ||+|+..              |+.++.+++++|++.+.+++||+ |   +|+      .+.+|.++         ..|.+
T Consensus        88 i~~a~~~--------------n~~~~~~l~~aa~~~g~v~~~v~-S---~~g------~~~~e~~~---------~~p~~  134 (346)
T 3i6i_A           88 VSTVGGE--------------SILDQIALVKAMKAVGTIKRFLP-S---EFG------HDVNRADP---------VEPGL  134 (346)
T ss_dssp             EECCCGG--------------GGGGHHHHHHHHHHHCCCSEEEC-S---CCS------SCTTTCCC---------CTTHH
T ss_pred             EECCchh--------------hHHHHHHHHHHHHHcCCceEEee-c---ccC------CCCCccCc---------CCCcc
Confidence            9999852              78889999999999876888886 4   353      12444443         25567


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc--CCCeeeHHHHHHHHH
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL--NISMVHIDDVARAHI  240 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~v~D~a~~~~  240 (327)
                      +|+.+|..+|++++.    .+++++++||+.++|......    ..............+...+  .++|+|++|+|++++
T Consensus       135 ~y~~sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~~~----~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~  206 (346)
T 3i6i_A          135 NMYREKRRVRQLVEE----SGIPFTYICCNSIASWPYYNN----IHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTM  206 (346)
T ss_dssp             HHHHHHHHHHHHHHH----TTCCBEEEECCEESSCCCSCC---------CCCCSSCEEEETTSCCCEEEECHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHH----cCCCEEEEEecccccccCccc----cccccccCCCceEEEccCCCceEEecCHHHHHHHHH
Confidence            899999999998864    689999999999999753221    1111100122222222222  279999999999999


Q ss_pred             HhhcCCCC-CceEEEe--ccccCHHHHHHHHHHhCC
Q 020334          241 FLLEYPDA-KGRYICS--SAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       241 ~~~~~~~~-~~~y~~~--~~~~s~~e~~~~i~~~~~  273 (327)
                      .++.++.. +++|++.  ++.+|+.|+++.+.+.+|
T Consensus       207 ~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g  242 (346)
T 3i6i_A          207 KTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIG  242 (346)
T ss_dssp             HHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHT
T ss_pred             HHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHC
Confidence            99998754 5677754  578999999999999887

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=100.00  E-value=1.7e-31  Score=229.54  Aligned_cols=256  Identities=16%  Similarity=0.223  Sum_probs=178.3

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      |+|||||||||||++++++|++. |++|++++| ++.....+   .     ..+++++.+|++|++++.++++++|+|||
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R-~~~~~~~~---~-----~~~v~~~~~D~~d~~~l~~~~~~~d~vi~   71 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVR-NVEKVPDD---W-----RGKVSVRQLDYFNQESMVEAFKGMDTVVF   71 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEES-SGGGSCGG---G-----BTTBEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEEC-CHHHHHHh---h-----hCCCEEEEcCCCCHHHHHHHHhCCCEEEE
Confidence            46999999999999999999998 999999999 44332222   1     25789999999999999999999999999


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhh
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSY  164 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  164 (327)
                      +|+....         ...|+.++.+++++|++.+ +++|||+||....           +.               .+|
T Consensus        72 ~a~~~~~---------~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~~~-----------~~---------------~~~  115 (289)
T 3e48_A           72 IPSIIHP---------SFKRIPEVENLVYAAKQSG-VAHIIFIGYYADQ-----------HN---------------NPF  115 (289)
T ss_dssp             CCCCCCS---------HHHHHHHHHHHHHHHHHTT-CCEEEEEEESCCS-----------TT---------------CCS
T ss_pred             eCCCCcc---------chhhHHHHHHHHHHHHHcC-CCEEEEEcccCCC-----------CC---------------CCC
Confidence            9986431         1347889999999999988 9999999994311           11               112


Q ss_pred             HhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC-CCeeeHHHHHHHHHHhh
Q 020334          165 VLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN-ISMVHIDDVARAHIFLL  243 (327)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~~~~~~~  243 (327)
                      ..++...  .++.+.++.+++++++||+.+||+..     ..+   ..........++.+.. ++|+|++|+|++++.++
T Consensus       116 ~~~~~~~--~~e~~~~~~g~~~~ilrp~~~~~~~~-----~~~---~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l  185 (289)
T 3e48_A          116 HMSPYFG--YASRLLSTSGIDYTYVRMAMYMDPLK-----PYL---PELMNMHKLIYPAGDGRINYITRNDIARGVIAII  185 (289)
T ss_dssp             TTHHHHH--HHHHHHHHHCCEEEEEEECEESTTHH-----HHH---HHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHH
T ss_pred             ccchhHH--HHHHHHHHcCCCEEEEeccccccccH-----HHH---HHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHH
Confidence            2222211  22333345799999999999999731     112   2222223333333333 78999999999999999


Q ss_pred             cCCCC-CceEEEeccccCHHHHHHHHHHhCCC-CC---CCCCC---------CCccc-------ccccccccChHHH-Hh
Q 020334          244 EYPDA-KGRYICSSAKLTIQEMAEFLSAKHPE-YP---IPNVD---------SLSEI-------EGYKLSALSSKKL-LD  301 (327)
Q Consensus       244 ~~~~~-~~~y~~~~~~~s~~e~~~~i~~~~~~-~~---~~~~~---------~~~~~-------~~~~~~~~d~~k~-~~  301 (327)
                      .++.. +++||++++.+|+.|+++.+.+.+|. ..   ++..+         ...+.       ........++..+ +.
T Consensus       186 ~~~~~~g~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  265 (289)
T 3e48_A          186 KNPDTWGKRYLLSGYSYDMKELAAILSEASGTEIKYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQL  265 (289)
T ss_dssp             HCGGGTTCEEEECCEEEEHHHHHHHHHHHHTSCCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHH
T ss_pred             cCCCcCCceEEeCCCcCCHHHHHHHHHHHHCCceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHH
Confidence            98765 66898778889999999999998872 11   11100         00000       0011223445556 77


Q ss_pred             ccccccccHHHHHHHH
Q 020334          302 ICFTYKYGIDEMFDGA  317 (327)
Q Consensus       302 lg~~p~~~~~~~l~~~  317 (327)
                      +|++|+ ++++.+++.
T Consensus       266 ~G~~p~-~~~~~~~~~  280 (289)
T 3e48_A          266 VNDQPQ-TLQSFLQEN  280 (289)
T ss_dssp             HSSCCC-CHHHHHHC-
T ss_pred             hCCCCC-CHHHHHHHH
Confidence            899999 998877654

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=5.2e-33  Score=228.62  Aligned_cols=207  Identities=18%  Similarity=0.118  Sum_probs=158.2

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG   78 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~   78 (327)
                      |+.|+|+||||||||+||++++++|+++|+  +|++++| ++...            ..+++++.+|+.|++++.+++  
T Consensus         1 M~~~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r-~~~~~------------~~~~~~~~~D~~~~~~~~~~~--   65 (215)
T 2a35_A            1 MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR-KALAE------------HPRLDNPVGPLAELLPQLDGS--   65 (215)
T ss_dssp             ---CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBS-SCCCC------------CTTEECCBSCHHHHGGGCCSC--
T ss_pred             CCCCCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeC-CCccc------------CCCceEEeccccCHHHHHHhh--
Confidence            666778999999999999999999999998  9999999 43321            247888999999998887777  


Q ss_pred             CCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcC
Q 020334           79 CAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLD  158 (327)
Q Consensus        79 ~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (327)
                      +|+|||+|+........+. +.+++|+.++.++++++++.+ +++||++||..+|+                        
T Consensus        66 ~d~vi~~a~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~------------------------  119 (215)
T 2a35_A           66 IDTAFCCLGTTIKEAGSEE-AFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADA------------------------  119 (215)
T ss_dssp             CSEEEECCCCCHHHHSSHH-HHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT------------------------
T ss_pred             hcEEEECeeeccccCCCHH-HHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCC------------------------
Confidence            9999999996543223444 889999999999999999987 88999999998873                        


Q ss_pred             CCchhhHhhhHHHHHHHHHHHHHcCCc-EEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHH
Q 020334          159 IWGKSYVLTKTLTERAALEFAEEHGLD-LVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVAR  237 (327)
Q Consensus       159 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~-~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  237 (327)
                      .+.++|+.+|..+|.+++.    .+++ ++++||+.+|||.....   .+..+    ......+. .+.++++|++|+|+
T Consensus       120 ~~~~~y~~sK~~~e~~~~~----~~~~~~~~vrp~~v~g~~~~~~---~~~~~----~~~~~~~~-~~~~~~i~~~Dva~  187 (215)
T 2a35_A          120 KSSIFYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFR---LAEIL----AAPIARIL-PGKYHGIEACDLAR  187 (215)
T ss_dssp             TCSSHHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEE---GGGGT----TCCCC-----CHHHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHH----cCCCeEEEEeCceeeCCCCcch---HHHHH----HHhhhhcc-CCCcCcEeHHHHHH
Confidence            2245799999999998864    5899 99999999999975421   11111    11111111 12368999999999


Q ss_pred             HHHHhhcCCCCCceEEEec-cccCH
Q 020334          238 AHIFLLEYPDAKGRYICSS-AKLTI  261 (327)
Q Consensus       238 ~~~~~~~~~~~~~~y~~~~-~~~s~  261 (327)
                      +++.+++++. +++||+++ +.+++
T Consensus       188 ~~~~~~~~~~-~~~~~i~~~~~~~~  211 (215)
T 2a35_A          188 ALWRLALEEG-KGVRFVESDELRKL  211 (215)
T ss_dssp             HHHHHHTCCC-SEEEEEEHHHHHHH
T ss_pred             HHHHHHhcCC-CCceEEcHHHHHHh
Confidence            9999999875 78998754 44443

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.97  E-value=9.9e-32  Score=221.86  Aligned_cols=217  Identities=14%  Similarity=0.122  Sum_probs=143.1

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      |+|||||||||||++++++|+++|++|++++| ++....   .+.      .+++++.+|++|+++  +.+.++|+||||
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~---~~~------~~~~~~~~D~~d~~~--~~~~~~d~vi~~   68 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVR-NAGKIT---QTH------KDINILQKDIFDLTL--SDLSDQNVVVDA   68 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CSHHHH---HHC------SSSEEEECCGGGCCH--HHHTTCSEEEEC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEc-Cchhhh---hcc------CCCeEEeccccChhh--hhhcCCCEEEEC
Confidence            47999999999999999999999999999999 443322   221      478999999999887  778899999999


Q ss_pred             cCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhH
Q 020334           86 AAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYV  165 (327)
Q Consensus        86 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~  165 (327)
                      |+....        ..+.|+.++.++++++++.+ .+++|++||..+++ +.....+..|+++         ..|.+.|+
T Consensus        69 ag~~~~--------~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~-~~~~~~~~~~~~~---------~~~~~~y~  129 (221)
T 3ew7_A           69 YGISPD--------EAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQ-IDEDGNTLLESKG---------LREAPYYP  129 (221)
T ss_dssp             CCSSTT--------TTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC-----------------------------CCCSC
T ss_pred             CcCCcc--------ccchHHHHHHHHHHHHHhcC-CceEEEEecceEEE-cCCCCccccccCC---------CCCHHHHH
Confidence            997431        24568999999999999987 89999999998775 2233334445443         24566799


Q ss_pred             hhhHHHHHHHHHHHH-HcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhc
Q 020334          166 LTKTLTERAALEFAE-EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLE  244 (327)
Q Consensus       166 ~sK~~~e~~~~~~~~-~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  244 (327)
                      .+|..+|.+ ..+.+ +.+++++++||+.+|||+...  ..+ .     ......... ....++++++|+|++++.+++
T Consensus       130 ~~k~~~e~~-~~~~~~~~gi~~~ivrp~~v~g~~~~~--~~~-~-----~~~~~~~~~-~~~~~~i~~~Dva~~~~~~l~  199 (221)
T 3ew7_A          130 TARAQAKQL-EHLKSHQAEFSWTYISPSAMFEPGERT--GDY-Q-----IGKDHLLFG-SDGNSFISMEDYAIAVLDEIE  199 (221)
T ss_dssp             CHHHHHHHH-HHHHTTTTTSCEEEEECSSCCCCC------------------------------CCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-HHHHhhccCccEEEEeCcceecCCCcc--Cce-E-----eccccceec-CCCCceEeHHHHHHHHHHHHh
Confidence            999999986 33333 579999999999999984221  111 0     011111111 112379999999999999999


Q ss_pred             CCCC-CceEEEec-cccCHHH
Q 020334          245 YPDA-KGRYICSS-AKLTIQE  263 (327)
Q Consensus       245 ~~~~-~~~y~~~~-~~~s~~e  263 (327)
                      ++.. +.+||+.+ ...+..|
T Consensus       200 ~~~~~g~~~~~~~~~~~~~~~  220 (221)
T 3ew7_A          200 RPNHLNEHFTVAGKLEHHHHH  220 (221)
T ss_dssp             SCSCTTSEEECCC--------
T ss_pred             CccccCCEEEECCCCcccccc
Confidence            8775 55898654 4455443

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.97  E-value=1.8e-31  Score=220.80  Aligned_cols=212  Identities=16%  Similarity=0.058  Sum_probs=156.3

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      |+|||||||||||++++++|+++|++|++++| ++...   ..+.     ..+++++.+|++|+++  +.+.++|+||||
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~---~~~~-----~~~~~~~~~D~~d~~~--~~~~~~d~vi~~   69 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVR-DPQKA---ADRL-----GATVATLVKEPLVLTE--ADLDSVDAVVDA   69 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHH---HHHT-----CTTSEEEECCGGGCCH--HHHTTCSEEEEC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEe-ccccc---cccc-----CCCceEEecccccccH--hhcccCCEEEEC
Confidence            46999999999999999999999999999999 43222   2221     2478999999999887  778899999999


Q ss_pred             cCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCC-CCcccCCCCCChhHhhhcCCCchhh
Q 020334           86 AAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKD-VDMLDETFWSDEDYIRKLDIWGKSY  164 (327)
Q Consensus        86 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~-~~~~~E~~~~~~~~~~~~~~~~~~Y  164 (327)
                      |+.....      ...+.|+.++.++++++++.+  ++||++||+++++..... ..+.+|...         ..|.+.|
T Consensus        70 ag~~~~~------~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~---------~~~~~~y  132 (224)
T 3h2s_A           70 LSVPWGS------GRGYLHLDFATHLVSLLRNSD--TLAVFILGSASLAMPGADHPMILDFPES---------AASQPWY  132 (224)
T ss_dssp             CCCCTTS------SCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGG---------GGGSTTH
T ss_pred             CccCCCc------chhhHHHHHHHHHHHHHHHcC--CcEEEEecceeeccCCCCccccccCCCC---------Cccchhh
Confidence            9975211      224679999999999999887  899999998766422221 123444432         2346789


Q ss_pred             HhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhc
Q 020334          165 VLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLE  244 (327)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  244 (327)
                      +.+|..+|. +..+.++.+++++++||+.+|||+....   +.       ............++++|++|+|++++.+++
T Consensus       133 ~~sK~~~e~-~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~-------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~  201 (224)
T 3h2s_A          133 DGALYQYYE-YQFLQMNANVNWIGISPSEAFPSGPATS---YV-------AGKDTLLVGEDGQSHITTGNMALAILDQLE  201 (224)
T ss_dssp             HHHHHHHHH-HHHHTTCTTSCEEEEEECSBCCCCCCCC---EE-------EESSBCCCCTTSCCBCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-HHHHHhcCCCcEEEEcCccccCCCcccC---ce-------ecccccccCCCCCceEeHHHHHHHHHHHhc
Confidence            999999994 4555555799999999999999953321   10       111111112223689999999999999999


Q ss_pred             CCCC-CceEEEec
Q 020334          245 YPDA-KGRYICSS  256 (327)
Q Consensus       245 ~~~~-~~~y~~~~  256 (327)
                      ++.. +++|++.+
T Consensus       202 ~~~~~g~~~~~~~  214 (224)
T 3h2s_A          202 HPTAIRDRIVVRD  214 (224)
T ss_dssp             SCCCTTSEEEEEE
T ss_pred             CccccCCEEEEec
Confidence            8765 55888654

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.97  E-value=7.3e-31  Score=221.07  Aligned_cols=227  Identities=16%  Similarity=0.190  Sum_probs=168.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHC--CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDH--GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      ++|+||||||+||||++++++|+++  |++|++++| ++...   ..+      ..+++++.+|++|++++.++++++|+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r-~~~~~---~~~------~~~~~~~~~D~~d~~~~~~~~~~~d~   72 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR-SAQGK---EKI------GGEADVFIGDITDADSINPAFQGIDA   72 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES-CHHHH---HHT------TCCTTEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc-CCCch---hhc------CCCeeEEEecCCCHHHHHHHHcCCCE
Confidence            4789999999999999999999999  899999999 43222   221      14678999999999999999999999


Q ss_pred             EEEccCCCCCC-----------C----CchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           82 VIHVAAPIDID-----------G----KETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        82 vih~a~~~~~~-----------~----~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                      |||+|+.....           .    +.+. ..+++|+.++.++++++++.+ +++||++||..++.          +.
T Consensus        73 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~~----------~~  140 (253)
T 1xq6_A           73 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQ-YPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTN----------PD  140 (253)
T ss_dssp             EEECCCCCCEECTTCCTTSSCCCCEECCTTC-SHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTC----------TT
T ss_pred             EEEeccccccccccccccccccchhhccccc-cceeeeHHHHHHHHHHHHHcC-CCEEEEEcCccCCC----------CC
Confidence            99999864310           0    1111 467999999999999999987 88999999987541          11


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                      .+     ..  ....+.|+.+|..+|.+++.    .+++++++||+.+||+....  ...+       .+....+. .+.
T Consensus       141 ~~-----~~--~~~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~--~~~~-------~~~~~~~~-~~~  199 (253)
T 1xq6_A          141 HP-----LN--KLGNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGV--RELL-------VGKDDELL-QTD  199 (253)
T ss_dssp             CG-----GG--GGGGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSSS--SCEE-------EESTTGGG-GSS
T ss_pred             Cc-----cc--cccchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcch--hhhh-------ccCCcCCc-CCC
Confidence            10     00  01113478899999988753    68999999999999996432  1111       01111111 123


Q ss_pred             CCeeeHHHHHHHHHHhhcCCCC-CceEEEec----cccCHHHHHHHHHHhCC
Q 020334          227 ISMVHIDDVARAHIFLLEYPDA-KGRYICSS----AKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~~~-~~~y~~~~----~~~s~~e~~~~i~~~~~  273 (327)
                      .+++|++|+|++++.+++++.. +++||+++    +.+|+.|+++.+.+.+|
T Consensus       200 ~~~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g  251 (253)
T 1xq6_A          200 TKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTS  251 (253)
T ss_dssp             CCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCC
T ss_pred             CcEEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhC
Confidence            5799999999999999988654 55898754    35999999999998876

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.97  E-value=3.6e-30  Score=222.37  Aligned_cols=269  Identities=16%  Similarity=0.175  Sum_probs=189.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ++|+||||||||+||++++++|+++| ++|++++| ++..... ..+.     ..+++++.+|+.|++++.++++++|+|
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R-~~~~~~~-~~l~-----~~~~~~~~~D~~d~~~l~~~~~~~d~v   76 (299)
T 2wm3_A            4 DKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR-NPRKKAA-KELR-----LQGAEVVQGDQDDQVIMELALNGAYAT   76 (299)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEES-CTTSHHH-HHHH-----HTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEc-CCCCHHH-HHHH-----HCCCEEEEecCCCHHHHHHHHhcCCEE
Confidence            35789999999999999999999998 99999999 4433211 1111     146899999999999999999999999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      ||+++....       ...+.|+.++.++++++++.+ +++||++||..+++.        ++.            .+..
T Consensus        77 i~~a~~~~~-------~~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~~~~~--------~~~------------~~~~  128 (299)
T 2wm3_A           77 FIVTNYWES-------CSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKL--------TAG------------RLAA  128 (299)
T ss_dssp             EECCCHHHH-------TCHHHHHHHHHHHHHHHHHHT-CSEEEECCCCCHHHH--------TTT------------SCCC
T ss_pred             EEeCCCCcc-------ccchHHHHHHHHHHHHHHHcC-CCEEEEEcCcccccc--------CCC------------cccC
Confidence            999974211       123567889999999999988 899999888776631        111            1245


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc--cccccc-cCCCeeeHHHHHHHH
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR--EEYSIL-LNISMVHIDDVARAH  239 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~i~v~D~a~~~  239 (327)
                      +|+.+|..+|.+++.    .+++++++||+.+||+......+...      ..+..  ..++.+ ..++|+|++|+|+++
T Consensus       129 ~y~~sK~~~e~~~~~----~gi~~~ilrp~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~i~~~Dva~~~  198 (299)
T 2wm3_A          129 AHFDGKGEVEEYFRD----IGVPMTSVRLPCYFENLLSHFLPQKA------PDGKSYLLSLPTGDVPMDGMSVSDLGPVV  198 (299)
T ss_dssp             HHHHHHHHHHHHHHH----HTCCEEEEECCEEGGGGGTTTCCEEC------TTSSSEEECCCCTTSCEEEECGGGHHHHH
T ss_pred             chhhHHHHHHHHHHH----CCCCEEEEeecHHhhhchhhcCCccc------CCCCEEEEEecCCCCccceecHHHHHHHH
Confidence            799999999998864    58999999999999985432111110      01111  112222 236999999999999


Q ss_pred             HHhhcCCC--CCceEEEeccccCHHHHHHHHHHhCCC----CCCCCCC----CCcc---ccc-----ccccccChHHH-H
Q 020334          240 IFLLEYPD--AKGRYICSSAKLTIQEMAEFLSAKHPE----YPIPNVD----SLSE---IEG-----YKLSALSSKKL-L  300 (327)
Q Consensus       240 ~~~~~~~~--~~~~y~~~~~~~s~~e~~~~i~~~~~~----~~~~~~~----~~~~---~~~-----~~~~~~d~~k~-~  300 (327)
                      +.++.++.  .+++|+++++.+|+.|+++.+.+.+|.    ..++...    ..+.   ...     ..... ..... +
T Consensus       199 ~~~l~~~~~~~g~~~~~~g~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~  277 (299)
T 2wm3_A          199 LSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRKVVHDAKMTPEDYEKLGFPGARDLANMFRFYALRPD-RDIELTL  277 (299)
T ss_dssp             HHHHHSHHHHTTCEEECCSEEECHHHHHHHHHHHHSSCEEECCCCTHHHHTTCSTTHHHHHHHHHHHTTCCC-CCHHHHH
T ss_pred             HHHHcChhhhCCeEEEeeeccCCHHHHHHHHHHHHCCCceeEecCHHHHHhcCCCcHHHHHHHHHHHHhcCC-CCHHHHH
Confidence            99998742  456899877889999999999998772    1222110    0000   000     00111 12234 6


Q ss_pred             hccccccccHHHHHHHHHH
Q 020334          301 DICFTYKYGIDEMFDGAIK  319 (327)
Q Consensus       301 ~lg~~p~~~~~~~l~~~~~  319 (327)
                      .+|.+|+ ++++.+++...
T Consensus       278 ~~g~~~~-~~~~~~~~~~~  295 (299)
T 2wm3_A          278 RLNPKAL-TLDQWLEQHKG  295 (299)
T ss_dssp             HHCTTCC-CHHHHHHHHGG
T ss_pred             HhCCCCC-CHHHHHHhChh
Confidence            7888888 99999887643

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.97  E-value=1.4e-29  Score=216.59  Aligned_cols=238  Identities=18%  Similarity=0.091  Sum_probs=168.2

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |+.++|++|||||+|+||++++++|+++|++|++++| +......+....     ..++.++.+|++|++++.++++   
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~   74 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTAR-RTEALDDLVAAY-----PDRAEAISLDVTDGERIDVVAADVL   74 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SGGGGHHHHHHC-----TTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHhc-----cCCceEEEeeCCCHHHHHHHHHHHH
Confidence            6666789999999999999999999999999999999 433322221111     2478999999999998887775   


Q ss_pred             ----CCCEEEEccCCCC------CCCCchHHHHHHHHHhH----HHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 ----GCAGVIHVAAPID------IDGKETEEVMTQRAVNG----TIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ----~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~----~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                          ++|+|||+||...      .+.+++ ...+++|+.+    ++.+++.+++.+ .++||++||...+..        
T Consensus        75 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~--------  144 (281)
T 3m1a_A           75 ARYGRVDVLVNNAGRTQVGAFEETTEREL-RDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQLS--------  144 (281)
T ss_dssp             HHHSCCSEEEECCCCEEECCTTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCC--------
T ss_pred             HhCCCCCEEEECCCcCCCCChhhCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccCC--------
Confidence                7899999998643      122233 3789999999    555566666666 689999999776521        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCC-------CCchHHHHHHH
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPK-------FAGSVRSTLAM  213 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~-------~~~~~~~~~~~  213 (327)
                                    .++.++|+.||...|.+++.++.+   .|+++++++||.+.+|.....       ...........
T Consensus       145 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  210 (281)
T 3m1a_A          145 --------------FAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPT  210 (281)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHH
T ss_pred             --------------CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHH
Confidence                          134678999999999999999887   689999999999988754321       11222111110


Q ss_pred             HhCCccccccccCCCeeeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHHhC
Q 020334          214 VLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYICS-SAKLTIQEMAEFLSAKH  272 (327)
Q Consensus       214 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~e~~~~i~~~~  272 (327)
                         .. .........+.+++|+|++++++++.+..++.|+++ +....+.+....+.+.+
T Consensus       211 ---~~-~~~~~~~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~  266 (281)
T 3m1a_A          211 ---RQ-LVQGSDGSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAEL  266 (281)
T ss_dssp             ---HH-HHHC-----CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHH
T ss_pred             ---HH-HHhhccCCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHH
Confidence               00 001111236889999999999999998888888875 44566666666665543

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.97  E-value=1e-29  Score=212.85  Aligned_cols=207  Identities=15%  Similarity=0.081  Sum_probs=157.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      +|+||||||+|+||++++++|+++|+  +|++++| ++.......        ..++.++.+|++|++++.++++++|+|
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r-~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~d~v   88 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGR-RKLTFDEEA--------YKNVNQEVVDFEKLDDYASAFQGHDVG   88 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEES-SCCCCCSGG--------GGGCEEEECCGGGGGGGGGGGSSCSEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEc-CCCCccccc--------cCCceEEecCcCCHHHHHHHhcCCCEE
Confidence            57899999999999999999999999  9999999 433322111        136789999999999999999999999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      |||||..... ..+ ...+++|+.++.++++++++.+ .++||++||..+|+                        .+.+
T Consensus        89 i~~ag~~~~~-~~~-~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~------------------------~~~~  141 (242)
T 2bka_A           89 FCCLGTTRGK-AGA-EGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADK------------------------SSNF  141 (242)
T ss_dssp             EECCCCCHHH-HHH-HHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT------------------------TCSS
T ss_pred             EECCCccccc-CCc-ccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCC------------------------CCcc
Confidence            9999964321 122 3788999999999999999887 88999999988773                        1234


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCC-cEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHH
Q 020334          163 SYVLTKTLTERAALEFAEEHGL-DLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIF  241 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~-~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  241 (327)
                      +|+.+|..+|.+++.    .++ +++++||+.+|||....   .............. +. ..+...+++++|+|++++.
T Consensus       142 ~Y~~sK~~~e~~~~~----~~~~~~~~vrpg~v~~~~~~~---~~~~~~~~~~~~~~-~~-~~~~~~~~~~~dva~~~~~  212 (242)
T 2bka_A          142 LYLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQES---RPGEWLVRKFFGSL-PD-SWASGHSVPVVTVVRAMLN  212 (242)
T ss_dssp             HHHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGG---SHHHHHHHHHHCSC-CT-TGGGGTEEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHh----cCCCCeEEEcCceecCCCCCC---cHHHHHHHHhhccc-Cc-cccCCcccCHHHHHHHHHH
Confidence            699999999998864    478 69999999999996432   12222222222211 10 1112369999999999999


Q ss_pred             hhcCCCCCceEEEec
Q 020334          242 LLEYPDAKGRYICSS  256 (327)
Q Consensus       242 ~~~~~~~~~~y~~~~  256 (327)
                      ++.++...+.|++++
T Consensus       213 ~~~~~~~~~~~~~~~  227 (242)
T 2bka_A          213 NVVRPRDKQMELLEN  227 (242)
T ss_dssp             HHTSCCCSSEEEEEH
T ss_pred             HHhCccccCeeEeeH
Confidence            999887777777654

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.97  E-value=5.6e-30  Score=225.65  Aligned_cols=226  Identities=15%  Similarity=0.129  Sum_probs=164.8

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCC-CCChhHHHHHhcCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNAD-LNDPESFDAAIAGC   79 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-~~d~~~~~~~~~~~   79 (327)
                      |+..+|+|||||||||||++++++|+++|++|++++| ++.... ...+..    ..+++++.+| ++|++++.++++++
T Consensus         1 M~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~-~~~l~~----~~~v~~v~~D~l~d~~~l~~~~~~~   74 (352)
T 1xgk_A            1 MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH-SLKGLI-AEELQA----IPNVTLFQGPLLNNVPLMDTLFEGA   74 (352)
T ss_dssp             --CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEES-CSCSHH-HHHHHT----STTEEEEESCCTTCHHHHHHHHTTC
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEC-CCChhh-HHHHhh----cCCcEEEECCccCCHHHHHHHHhcC
Confidence            5533678999999999999999999999999999999 443321 112221    1368999999 99999999999999


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecccee--eeecCCCCCcccCCCCCChhHhhhc
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGST--VYFSGKDVDMLDETFWSDEDYIRKL  157 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v--~~~~~~~~~~~~E~~~~~~~~~~~~  157 (327)
                      |+|||+++....          ..|..+ .++++++++.+++++|||+||..+  |+                       
T Consensus        75 d~Vi~~a~~~~~----------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~-----------------------  120 (352)
T 1xgk_A           75 HLAFINTTSQAG----------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYG-----------------------  120 (352)
T ss_dssp             SEEEECCCSTTS----------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTS-----------------------
T ss_pred             CEEEEcCCCCCc----------HHHHHH-HHHHHHHHHcCCccEEEEeCCccccccC-----------------------
Confidence            999999975321          235666 999999998754789999999752  21                       


Q ss_pred             CCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc--c--cccCCCeeeH-
Q 020334          158 DIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY--S--ILLNISMVHI-  232 (327)
Q Consensus       158 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~i~v-  232 (327)
                      ..+.++|+.+|..+|++++.    .+++++++||+ +||++........+..  .....+...+  .  ..+.++++|+ 
T Consensus       121 ~~~~~~y~~sK~~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~i~v~  193 (352)
T 1xgk_A          121 PWPAVPMWAPKFTVENYVRQ----LGLPSTFVYAG-IYNNNFTSLPYPLFQM--ELMPDGTFEWHAPFDPDIPLPWLDAE  193 (352)
T ss_dssp             SCCCCTTTHHHHHHHHHHHT----SSSCEEEEEEC-EEGGGCBSSSCSSCBE--EECTTSCEEEEESSCTTSCEEEECHH
T ss_pred             CCCCccHHHHHHHHHHHHHH----cCCCEEEEecc-eecCCchhcccccccc--cccCCCceEEeeccCCCCceeeEecH
Confidence            02235699999999999865    48999999986 7998754321111100  0001111111  2  2233799999 


Q ss_pred             HHHHHHHHHhhcCCC---CCceEEEeccccCHHHHHHHHHHhCC
Q 020334          233 DDVARAHIFLLEYPD---AKGRYICSSAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       233 ~D~a~~~~~~~~~~~---~~~~y~~~~~~~s~~e~~~~i~~~~~  273 (327)
                      +|+|++++.+++++.   .+++||++++.+|+.|+++.+.+.+|
T Consensus       194 ~Dva~ai~~~l~~~~~~~~g~~~~l~~~~~s~~e~~~~i~~~~G  237 (352)
T 1xgk_A          194 HDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALN  237 (352)
T ss_dssp             HHHHHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCCchhhCCeEEEEecCCCCHHHHHHHHHHHHC
Confidence            899999999998752   46799988888999999999999877

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.97  E-value=3.4e-28  Score=198.33  Aligned_cols=201  Identities=17%  Similarity=0.162  Sum_probs=151.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +|+||||||||+||++++++|+++|++|++++| ++......   .     ..+++++.+|+.|++++.++++++|+|||
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~---~-----~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   73 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR-DSSRLPSE---G-----PRPAHVVVGDVLQAADVDKTVAGQDAVIV   73 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CGGGSCSS---S-----CCCSEEEESCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe-Chhhcccc---c-----CCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            378999999999999999999999999999999 43222111   0     25789999999999999999999999999


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhh
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSY  164 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  164 (327)
                      +|+.....  ++    .+.|+.++.++++++++.+ +++||++||..+|+..  ...      +          .+.++|
T Consensus        74 ~a~~~~~~--~~----~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~~~~--~~~------~----------~~~~~y  128 (206)
T 1hdo_A           74 LLGTRNDL--SP----TTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDP--TKV------P----------PRLQAV  128 (206)
T ss_dssp             CCCCTTCC--SC----CCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCT--TCS------C----------GGGHHH
T ss_pred             CccCCCCC--Cc----cchHHHHHHHHHHHHHHhC-CCeEEEEeeeeeccCc--ccc------c----------ccchhH
Confidence            99865431  22    2478999999999999987 8899999999887421  110      0          135689


Q ss_pred             HhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhc
Q 020334          165 VLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLE  244 (327)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  244 (327)
                      +.+|..+|.+++    +.+++++++||+.+ ++....  ......    ..+.+      + .+++|++|+|++++.+++
T Consensus       129 ~~~K~~~e~~~~----~~~i~~~~lrp~~~-~~~~~~--~~~~~~----~~~~~------~-~~~i~~~Dva~~~~~~~~  190 (206)
T 1hdo_A          129 TDDHIRMHKVLR----ESGLKYVAVMPPHI-GDQPLT--GAYTVT----LDGRG------P-SRVISKHDLGHFMLRCLT  190 (206)
T ss_dssp             HHHHHHHHHHHH----HTCSEEEEECCSEE-ECCCCC--SCCEEE----SSSCS------S-CSEEEHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHH----hCCCCEEEEeCCcc-cCCCCC--cceEec----ccCCC------C-CCccCHHHHHHHHHHHhc
Confidence            999999999884    46899999999997 443211  111000    00000      0 489999999999999999


Q ss_pred             CCCC-CceEEEecc
Q 020334          245 YPDA-KGRYICSSA  257 (327)
Q Consensus       245 ~~~~-~~~y~~~~~  257 (327)
                      ++.. +++|+++++
T Consensus       191 ~~~~~g~~~~i~~g  204 (206)
T 1hdo_A          191 TDEYDGHSTYPSHQ  204 (206)
T ss_dssp             CSTTTTCEEEEECC
T ss_pred             Cccccccceeeecc
Confidence            8754 558887653

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.96  E-value=6.3e-28  Score=206.13  Aligned_cols=235  Identities=15%  Similarity=0.157  Sum_probs=170.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+++||||||+|+||++++++|+++|++|++++| +....... ..+..    ..++.++.+|++|++++.++++     
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   89 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADI-ADDHGQKVCNNIGS----PDVISFVHCDVTKDEDVRNLVDTTIAK   89 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHCC----TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC-ChhHHHHHHHHhCC----CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999 43222211 12211    1378999999999999888775     


Q ss_pred             --CCCEEEEccCCCCC--------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcc
Q 020334           78 --GCAGVIHVAAPIDI--------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 --~~d~vih~a~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                        ++|+|||+||....        ..+.+ .+.+++|+.++.++++++.+.    + .++||++||..++...       
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-------  160 (278)
T 2bgk_A           90 HGKLDIMFGNVGVLSTTPYSILEAGNEDF-KRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAG-------  160 (278)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCC-------
T ss_pred             cCCCCEEEECCcccCCCCCChhhCCHHHH-HHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccCCC-------
Confidence              78999999986431        11233 378999999999999887763    3 5799999998876411       


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    ..+...|+.+|...|.+++.++.+   .|++++++||+.++|+....................+..
T Consensus       161 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  226 (278)
T 2bgk_A          161 --------------EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANL  226 (278)
T ss_dssp             --------------TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSS
T ss_pred             --------------CCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccccc
Confidence                          013457999999999999999876   489999999999999975432221111111111111111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEe-ccccCHHHHHHHHHHh
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICS-SAKLTIQEMAEFLSAK  271 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~-~~~~s~~e~~~~i~~~  271 (327)
                           ...+++++|+|+++++++....   .+..|++. +..+++.|+++.+.+.
T Consensus       227 -----~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~  276 (278)
T 2bgk_A          227 -----KGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHG  276 (278)
T ss_dssp             -----CSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSC
T ss_pred             -----ccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhh
Confidence                 1368999999999999997532   24477775 5679999999888654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.96  E-value=7.9e-28  Score=202.88  Aligned_cols=220  Identities=12%  Similarity=0.067  Sum_probs=160.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+++||||||+|+||++++++|+++|++|++++| ++..... ...+...   ..++.++.+|++|++++.++++     
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDI-NADAANHVVDEIQQL---GGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEES-CHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999 4322221 1222211   2468899999999999888775     


Q ss_pred             --CCCEEEEccCCCCC-----CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 --GCAGVIHVAAPIDI-----DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 --~~d~vih~a~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                        ++|+|||+||....     +.+++ ...+++|+.++.++++++.    +.+ .++||++||...+..           
T Consensus        86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~-----------  152 (255)
T 1fmc_A           86 LGKVDILVNNAGGGGPKPFDMPMADF-RRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENK-----------  152 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCC-----------
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCC-----------
Confidence              79999999986542     12233 3789999999999888875    334 689999999876631           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHH-HhCCccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAM-VLGNREEYS  222 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~  222 (327)
                                 .++.+.|+.+|...|.+++.++.++   +++++++||+.++++........   ..... ..+.+  . 
T Consensus       153 -----------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~--~-  215 (255)
T 1fmc_A          153 -----------NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP---EIEQKMLQHTP--I-  215 (255)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCH---HHHHHHHHTCS--S-
T ss_pred             -----------CCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccCh---HHHHHHHhcCC--c-
Confidence                       1335679999999999999988765   89999999999999853321111   11111 12221  1 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEe-ccccCH
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICS-SAKLTI  261 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~-~~~~s~  261 (327)
                          ..+++++|+|+++++++....   .+.+|+++ +...|+
T Consensus       216 ----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          216 ----RRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             ----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             ----ccCCCHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence                268899999999999997642   34578875 445554

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.95  E-value=9.5e-27  Score=193.93  Aligned_cols=200  Identities=17%  Similarity=0.140  Sum_probs=136.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      |||+||||||||+||++++++|+++| ++|++++| ++.....+   .     ..+++++.+|++|++++.++++++|+|
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R-~~~~~~~~---~-----~~~~~~~~~Dl~d~~~~~~~~~~~D~v   92 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFAR-QPAKIHKP---Y-----PTNSQIIMGDVLNHAALKQAMQGQDIV   92 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEES-SGGGSCSS---C-----CTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEc-Chhhhccc---c-----cCCcEEEEecCCCHHHHHHHhcCCCEE
Confidence            47889999999999999999999999 89999999 43322211   1     247899999999999999999999999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      ||+++...        ..     ..+.++++++++.+ +++||++||..+|+..+....+..+..+         ..+..
T Consensus        93 v~~a~~~~--------~~-----~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~~~~~---------~~~~~  149 (236)
T 3qvo_A           93 YANLTGED--------LD-----IQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAVI---------GEPLK  149 (236)
T ss_dssp             EEECCSTT--------HH-----HHHHHHHHHHHHTT-CCEEEEECCCCC-------------------------CGGGH
T ss_pred             EEcCCCCc--------hh-----HHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccchhhcc---------cchHH
Confidence            99998522        11     23668999999888 8999999999998633222222233321         12223


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHh
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFL  242 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  242 (327)
                      .|    ..+|..+    ++.+++++++||+.++++.....  ..        .......    ...+++++|+|++++++
T Consensus       150 ~~----~~~~~~l----~~~gi~~~~vrPg~i~~~~~~~~--~~--------~~~~~~~----~~~~i~~~DvA~~i~~l  207 (236)
T 3qvo_A          150 PF----RRAADAI----EASGLEYTILRPAWLTDEDIIDY--EL--------TSRNEPF----KGTIVSRKSVAALITDI  207 (236)
T ss_dssp             HH----HHHHHHH----HTSCSEEEEEEECEEECCSCCCC--EE--------ECTTSCC----SCSEEEHHHHHHHHHHH
T ss_pred             HH----HHHHHHH----HHCCCCEEEEeCCcccCCCCcce--EE--------eccCCCC----CCcEECHHHHHHHHHHH
Confidence            34    3444444    35799999999999999753220  00        0000010    12689999999999999


Q ss_pred             hcCCC--CCceEEEecc
Q 020334          243 LEYPD--AKGRYICSSA  257 (327)
Q Consensus       243 ~~~~~--~~~~y~~~~~  257 (327)
                      +.++.  .++.|++++.
T Consensus       208 l~~~~~~~g~~~~i~~~  224 (236)
T 3qvo_A          208 IDKPEKHIGENIGINQP  224 (236)
T ss_dssp             HHSTTTTTTEEEEEECS
T ss_pred             HcCcccccCeeEEecCC
Confidence            99876  4567887554

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=3.4e-28  Score=205.03  Aligned_cols=232  Identities=15%  Similarity=0.058  Sum_probs=157.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----CCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----GCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d   80 (327)
                      ||+||||||+||||++++++|+++|++|++++| ++....            .   .+.+|++|.+++.++++    ++|
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r-~~~~~~------------~---~~~~D~~~~~~~~~~~~~~~~~~d   64 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDR-GQADIE------------A---DLSTPGGRETAVAAVLDRCGGVLD   64 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SSSSEE------------C---CTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeC-ChhHcc------------c---cccCCcccHHHHHHHHHHcCCCcc
Confidence            468999999999999999999999999999999 433221            0   15689999998888876    799


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCcccCCCC-CChhH---
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLDETFW-SDEDY---  153 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~-~~~~~---  153 (327)
                      +||||||.... ...+. ..+++|+.++.++++++.+.   ...++||++||..+|+.. ....+..|... ..+..   
T Consensus        65 ~vi~~Ag~~~~-~~~~~-~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~~~~~~~~~~~~~~~~~~~~  141 (255)
T 2dkn_A           65 GLVCCAGVGVT-AANSG-LVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPG-AAELPMVEAMLAGDEARAIE  141 (255)
T ss_dssp             EEEECCCCCTT-SSCHH-HHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTT-GGGCHHHHHHHHTCHHHHHH
T ss_pred             EEEECCCCCCc-chhHH-HHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccccc-ccccchhhhhcccchhhhhh
Confidence            99999997542 23444 88999999999999987764   125899999999888521 11111111100 00000   


Q ss_pred             -hhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCe
Q 020334          154 -IRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISM  229 (327)
Q Consensus       154 -~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (327)
                       ......+.+.|+.+|...|.+++.++++   .+++++++||+.++||...........  ......    +. ...+++
T Consensus       142 ~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~--~~~~~~----~~-~~~~~~  214 (255)
T 2dkn_A          142 LAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRY--GESTRR----FV-APLGRG  214 (255)
T ss_dssp             HHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTT--HHHHHS----CC-CTTSSC
T ss_pred             hccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhh--HHHHHH----HH-HHhcCC
Confidence             0000134678999999999999998876   589999999999999842210000000  000000    00 012479


Q ss_pred             eeHHHHHHHHHHhhcCC--C-CCceEEEec-cccCHH
Q 020334          230 VHIDDVARAHIFLLEYP--D-AKGRYICSS-AKLTIQ  262 (327)
Q Consensus       230 i~v~D~a~~~~~~~~~~--~-~~~~y~~~~-~~~s~~  262 (327)
                      ++++|+|++++++++.+  . .+..|++++ ..++++
T Consensus       215 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~  251 (255)
T 2dkn_A          215 SEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMR  251 (255)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHC
T ss_pred             CCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeee
Confidence            99999999999999875  2 345788754 445443

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.95  E-value=5.3e-27  Score=203.76  Aligned_cols=235  Identities=17%  Similarity=0.166  Sum_probs=161.3

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC-cchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH-KKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGC   79 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~   79 (327)
                      |+. +|+|||||||||||++++++|+++|++|++++|+.... ......+...  ...+++++.+|+.|++++.++++++
T Consensus         1 M~~-~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~l~~~~~~~   77 (313)
T 1qyd_A            1 MDK-KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF--KQLGAKLIEASLDDHQRLVDALKQV   77 (313)
T ss_dssp             -CC-CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH--HTTTCEEECCCSSCHHHHHHHHTTC
T ss_pred             CCC-CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHH--HhCCeEEEeCCCCCHHHHHHHHhCC
Confidence            543 57899999999999999999999999999999943221 1111111100  0247899999999999999999999


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |+|||+++.....          .|+.++.+++++|++.+.+++||+ |   +|+.. . ..+   +.+        ..+
T Consensus        78 d~vi~~a~~~~~~----------~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~-~-~~~---~~~--------~~p  130 (313)
T 1qyd_A           78 DVVISALAGGVLS----------HHILEQLKLVEAIKEAGNIKRFLP-S---EFGMD-P-DIM---EHA--------LQP  130 (313)
T ss_dssp             SEEEECCCCSSSS----------TTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSC-T-TSC---CCC--------CSS
T ss_pred             CEEEECCccccch----------hhHHHHHHHHHHHHhcCCCceEEe-c---CCcCC-c-ccc---ccC--------CCC
Confidence            9999999865321          257788999999998765789985 4   35311 1 111   111        012


Q ss_pred             CchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc-C-CCeeeHHHHHH
Q 020334          160 WGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL-N-ISMVHIDDVAR  237 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~i~v~D~a~  237 (327)
                      ..+.| .+|..+|++++    +.+++++++||+.++|+......... .  ......+.......+ . ++++|++|+|+
T Consensus       131 ~~~~y-~sK~~~e~~~~----~~g~~~~ilrp~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~g~~~~~~i~~~Dva~  202 (313)
T 1qyd_A          131 GSITF-IDKRKVRRAIE----AASIPYTYVSSNMFAGYFAGSLAQLD-G--HMMPPRDKVLIYGDGNVKGIWVDEDDVGT  202 (313)
T ss_dssp             TTHHH-HHHHHHHHHHH----HTTCCBCEEECCEEHHHHTTTSSCTT-C--CSSCCSSEECCBTTSCSEEEEECHHHHHH
T ss_pred             CcchH-HHHHHHHHHHH----hcCCCeEEEEeceecccccccccccc-c--cccCCCCeEEEeCCCCceEEEEEHHHHHH
Confidence            24568 99999998885    46899999999988886432111100 0  000011222222222 2 79999999999


Q ss_pred             HHHHhhcCCCC-CceEEE-e-ccccCHHHHHHHHHHhCC
Q 020334          238 AHIFLLEYPDA-KGRYIC-S-SAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       238 ~~~~~~~~~~~-~~~y~~-~-~~~~s~~e~~~~i~~~~~  273 (327)
                      +++.++.++.. ++.|++ + ++.+|+.|+++.+.+.+|
T Consensus       203 ~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g  241 (313)
T 1qyd_A          203 YTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSE  241 (313)
T ss_dssp             HHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred             HHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcC
Confidence            99999988653 456664 4 468999999999999887

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=1.2e-26  Score=198.08  Aligned_cols=239  Identities=16%  Similarity=0.118  Sum_probs=155.7

Q ss_pred             CCC-CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-
Q 020334            1 MEE-QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-   77 (327)
Q Consensus         1 m~~-~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-   77 (327)
                      |.. ++|++|||||+|+||++++++|+++|++|++++| ++...... ..+........++.++.+|++|++++.++++ 
T Consensus         1 m~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (278)
T 1spx_A            1 MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGR-HAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILST   79 (278)
T ss_dssp             -CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHH
Confidence            443 3578999999999999999999999999999999 43322221 1121001112468899999999998888776 


Q ss_pred             ------CCCEEEEccCCCCC----------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEecccee-eeec
Q 020334           78 ------GCAGVIHVAAPIDI----------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGST-VYFS  136 (327)
Q Consensus        78 ------~~d~vih~a~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v-~~~~  136 (327)
                            ++|++||+||....          +.+++ ...+++|+.++.++++++.+.    +  ++||++||... +. +
T Consensus        80 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~-~  155 (278)
T 1spx_A           80 TLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESY-DATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLH-A  155 (278)
T ss_dssp             HHHHHSCCCEEEECCC-------------CCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSS-C
T ss_pred             HHHHcCCCCEEEECCCCCCCcccccccccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEeccccccc-C
Confidence                  79999999986432          22233 378999999999998887754    3  79999999875 42 1


Q ss_pred             CCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC---Cch--HH
Q 020334          137 GKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKF---AGS--VR  208 (327)
Q Consensus       137 ~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~---~~~--~~  208 (327)
                                           .++...|+.+|...+.+.+.++.+   .|+++++++||.++++......   ...  +.
T Consensus       156 ---------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~  214 (278)
T 1spx_A          156 ---------------------TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFY  214 (278)
T ss_dssp             ---------------------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------H
T ss_pred             ---------------------CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhh
Confidence                                 123457999999999999998866   4899999999999998533210   000  00


Q ss_pred             HHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC----CCceEEEe-ccccCHHHHHHHHHHh
Q 020334          209 STLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD----AKGRYICS-SAKLTIQEMAEFLSAK  271 (327)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~----~~~~y~~~-~~~~s~~e~~~~i~~~  271 (327)
                      ........ ..+.     ..+++++|+|+++++++..+.    .+..+++. |...++.|+++.+.+.
T Consensus       215 ~~~~~~~~-~~p~-----~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~  276 (278)
T 1spx_A          215 STMATMKE-CVPA-----GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKL  276 (278)
T ss_dssp             HHHHHHHH-HCTT-----SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC-----------
T ss_pred             HHHHHHHh-cCCC-----cCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHH
Confidence            00111110 0111     258999999999999987532    34467775 5579999999988764

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.95  E-value=2e-26  Score=194.87  Aligned_cols=219  Identities=16%  Similarity=0.085  Sum_probs=156.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++||||||+|+||++++++|+++|++|++++| ++..... ...+...   ..++.++.+|++|++++.++++      
T Consensus        13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (260)
T 3awd_A           13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADL-DEAMATKAVEDLRME---GHDVSSVVMDVTNTESVQNAVRSVHEQE   88 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999 4322211 1222211   2468999999999998887765      


Q ss_pred             -CCCEEEEccCCCC-C------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 -GCAGVIHVAAPID-I------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 -~~d~vih~a~~~~-~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                       ++|+|||+||... .      ..+.+ .+.+++|+.++.++++++.+    .+ .+++|++||...+...         
T Consensus        89 ~~id~vi~~Ag~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~---------  157 (260)
T 3awd_A           89 GRVDILVACAGICISEVKAEDMTDGQW-LKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVN---------  157 (260)
T ss_dssp             SCCCEEEECCCCCCCSCCTTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---------
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHH-HHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccC---------
Confidence             6899999998643 1      11222 37899999999999888764    34 6799999997654210         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHH-hCCcccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-LGNREEY  221 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~  221 (327)
                        +         ..+.+.|+.+|...|.+++.++.+   .+++++++||+.+++|........  ....... ...  +.
T Consensus       158 --~---------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~--~~  222 (260)
T 3awd_A          158 --R---------PQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEK--PELYDAWIAGT--PM  222 (260)
T ss_dssp             --S---------SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTC--HHHHHHHHHTC--TT
T ss_pred             --C---------CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCC--hHHHHHHHhcC--Cc
Confidence              0         122367999999999999999887   589999999999999864311010  1111111 111  11


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEeccc
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSAK  258 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~~  258 (327)
                           ..+++++|+|+++++++....   .+..|+++++.
T Consensus       223 -----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          223 -----GRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             -----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             -----CCCCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence                 268899999999999987532   34467776653

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.95  E-value=2.7e-26  Score=192.16  Aligned_cols=215  Identities=16%  Similarity=0.100  Sum_probs=155.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---CCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---GCA   80 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d   80 (327)
                      .+|+||||||+|+||++++++|+++|++|++++| ++........  ..    .+++++.+|++|++++.++++   ++|
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~--~~----~~~~~~~~D~~~~~~~~~~~~~~~~id   78 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTR-TNSDLVSLAK--EC----PGIEPVCVDLGDWDATEKALGGIGPVD   78 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--HS----TTCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH--hc----cCCCcEEecCCCHHHHHHHHHHcCCCC
Confidence            3578999999999999999999999999999999 4322221111  11    356788999999999999886   479


Q ss_pred             EEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           81 GVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        81 ~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                      +|||+||....      ..+.+ ...+++|+.++.++++++.+.    +..++||++||..++..               
T Consensus        79 ~vi~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------  142 (244)
T 1cyd_A           79 LLVNNAALVIMQPFLEVTKEAF-DRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT---------------  142 (244)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC---------------
T ss_pred             EEEECCcccCCCCcccCCHHHH-HHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCC---------------
Confidence            99999996542      11233 378999999999998887654    21479999999877631               


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHH-HhCCccccccccC
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAM-VLGNREEYSILLN  226 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  226 (327)
                             .++...|+.+|...|.+++.++++   .+++++++||+.++++........  ..+... ..+.+       .
T Consensus       143 -------~~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~-------~  206 (244)
T 1cyd_A          143 -------FPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD--PEFARKLKERHP-------L  206 (244)
T ss_dssp             -------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC--HHHHHHHHHHST-------T
T ss_pred             -------CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccC--HHHHHHHHhcCC-------c
Confidence                   123567999999999999999877   489999999999999853211111  111111 11111       1


Q ss_pred             CCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          227 ISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      +++++++|+|++++++++.+.   .+..+++.+.
T Consensus       207 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  240 (244)
T 1cyd_A          207 RKFAEVEDVVNSILFLLSDRSASTSGGGILVDAG  240 (244)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred             cCCCCHHHHHHHHHHHhCchhhcccCCEEEECCC
Confidence            479999999999999997643   2345666543

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.95  E-value=1e-26  Score=202.51  Aligned_cols=219  Identities=19%  Similarity=0.132  Sum_probs=157.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      |+++||||||||+||++++++|+++|++|++++|+.......+..+..     .+++++.+|+.|++++.++++++|+||
T Consensus        10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~-----~~v~~v~~Dl~d~~~l~~a~~~~d~vi   84 (318)
T 2r6j_A           10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS-----LGAIIVKGELDEHEKLVELMKKVDVVI   84 (318)
T ss_dssp             CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH-----TTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc-----CCCEEEEecCCCHHHHHHHHcCCCEEE
Confidence            456899999999999999999999999999999943323222222221     478999999999999999999999999


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC-ch
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW-GK  162 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~-~~  162 (327)
                      |+++...              +.++.++++++++.+.+++||+ |+   |+..      .+|.++         ..| ..
T Consensus        85 ~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~------~~~~~~---------~~p~~~  131 (318)
T 2r6j_A           85 SALAFPQ--------------ILDQFKILEAIKVAGNIKRFLP-SD---FGVE------EDRINA---------LPPFEA  131 (318)
T ss_dssp             ECCCGGG--------------STTHHHHHHHHHHHCCCCEEEC-SC---CSSC------TTTCCC---------CHHHHH
T ss_pred             ECCchhh--------------hHHHHHHHHHHHhcCCCCEEEe-ec---cccC------cccccC---------CCCcch
Confidence            9998532              4567899999998765788884 43   4311      122221         112 34


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHH-HhCCcccccccc-C-CCeeeHHHHHHHH
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAM-VLGNREEYSILL-N-ISMVHIDDVARAH  239 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~-~~~i~v~D~a~~~  239 (327)
                      .| .+|..+|.+++    +.+++++++||+.++++.        +..+... .......+...+ . ++++|++|+++++
T Consensus       132 ~y-~sK~~~e~~~~----~~~~~~~~lr~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  198 (318)
T 2r6j_A          132 LI-ERKRMIRRAIE----EANIPYTYVSANCFASYF--------INYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYT  198 (318)
T ss_dssp             HH-HHHHHHHHHHH----HTTCCBEEEECCEEHHHH--------HHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHH
T ss_pred             hH-HHHHHHHHHHH----hcCCCeEEEEcceehhhh--------hhhhccccCCCCceEEecCCCceeeEeeHHHHHHHH
Confidence            68 99999998875    368999999998777641        1111111 112222222222 2 7999999999999


Q ss_pred             HHhhcCCCC-CceEEE-e-ccccCHHHHHHHHHHhCC
Q 020334          240 IFLLEYPDA-KGRYIC-S-SAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       240 ~~~~~~~~~-~~~y~~-~-~~~~s~~e~~~~i~~~~~  273 (327)
                      +.++.++.. ++.|++ + ++.+|+.|+++.+.+.+|
T Consensus       199 ~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g  235 (318)
T 2r6j_A          199 IKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIG  235 (318)
T ss_dssp             HHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred             HHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhC
Confidence            999987653 456664 3 478999999999999887

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.95  E-value=6.4e-27  Score=202.25  Aligned_cols=235  Identities=15%  Similarity=0.087  Sum_probs=164.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++||||||+|+||++++++|+++|++|++++| ++..... ...+....  ..++.++.+|++|.+++.++++      
T Consensus        26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  102 (302)
T 1w6u_A           26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASR-KMDVLKATAEQISSQT--GNKVHAIQCDVRDPDMVQNTVSELIKVA  102 (302)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHhc--CCceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999 4322211 11121100  1468999999999998887765      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|+|||+||....      ..+.+ ...+++|+.++.++++++.+.    ...++||++||...+..           
T Consensus       103 g~id~li~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------  170 (302)
T 1w6u_A          103 GHPNIVINNAAGNFISPTERLSPNAW-KTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG-----------  170 (302)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC-----------
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC-----------
Confidence             46999999996432      12233 378999999999998877542    22579999999866531           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC-CchHHHHHHHHhCCccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKF-AGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~  222 (327)
                                 .++...|+.+|...|.+++.++.+   .|++++++|||.++++...... +....  ...... ..+. 
T Consensus       171 -----------~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~-~~p~-  235 (302)
T 1w6u_A          171 -----------SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTF--EKEMIG-RIPC-  235 (302)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHH--HHHHHT-TCTT-
T ss_pred             -----------CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhh--HHHHHh-cCCc-
Confidence                       133567999999999999999887   5899999999999998432211 11111  111111 1111 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEe-ccccCHHHHHHHHHHhCC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICS-SAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~-~~~~s~~e~~~~i~~~~~  273 (327)
                          ..+++++|+|+++++++....   .+.+|+++ +..++++++++.+.+..+
T Consensus       236 ----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          236 ----GRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK  286 (302)
T ss_dssp             ----SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred             ----CCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence                258899999999999997543   34477875 456788888777666544

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.94  E-value=9.1e-27  Score=199.07  Aligned_cols=239  Identities=19%  Similarity=0.188  Sum_probs=168.5

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      ..+|++|||||+|+||++++++|+++|++|++++| ++... .....+........++.++.+|++|++++.++++    
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (281)
T 3svt_A            9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGR-NPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA   87 (281)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999 43322 2223333321112368899999999998887765    


Q ss_pred             ---CCCEEEEccCCCC-------CCCCchHHHHHHHHHhHHHHHHHHHHhcC---CccEEEEeccceeeeecCCCCCccc
Q 020334           78 ---GCAGVIHVAAPID-------IDGKETEEVMTQRAVNGTIGILKSCLKSG---TVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 ---~~d~vih~a~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                         ++|++|||||...       .+.+++. ..+++|+.++.++++++.+.-   ...+||++||...+..         
T Consensus        88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------  157 (281)
T 3svt_A           88 WHGRLHGVVHCAGGSENIGPITQVDSEAWR-RTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNT---------  157 (281)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC---------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCC---------
Confidence               6899999999622       1222333 789999999999998776542   1459999999876631         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .++...|+.||...+.+.+.++.++   ++++++++||.++++........  ........ ...+.
T Consensus       158 -------------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~--~~~~~~~~-~~~p~  221 (281)
T 3svt_A          158 -------------HRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITES--AELSSDYA-MCTPL  221 (281)
T ss_dssp             -------------CTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC--HHHHHHHH-HHCSS
T ss_pred             -------------CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccC--HHHHHHHH-hcCCC
Confidence                         1234579999999999999998775   69999999999998853211000  00111111 01111


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEec-cccC-HHHHHHHHHHhCC
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSS-AKLT-IQEMAEFLSAKHP  273 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~-~~~s-~~e~~~~i~~~~~  273 (327)
                           ..+.+++|+|+++++++....   .+..+++++ ...+ ..|+++.+.+.++
T Consensus       222 -----~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~  273 (281)
T 3svt_A          222 -----PRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFG  273 (281)
T ss_dssp             -----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHC
T ss_pred             -----CCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccC
Confidence                 268899999999999997643   245778754 4454 6777877777666

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.94  E-value=4.7e-26  Score=192.33  Aligned_cols=219  Identities=19%  Similarity=0.154  Sum_probs=156.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|++|||||+|+||++++++|+++|++|++++| +...........     ..++.++.+|++|++++.++++       
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   81 (259)
T 4e6p_A            8 GKSALITGSARGIGRAFAEAYVREGATVAIADI-DIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATVEHAG   81 (259)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999 433222221111     2468899999999998888776       


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|++|||||....      +.+++. +.+++|+.++.++++++.+.    +...+||++||...+..            
T Consensus        82 ~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------  148 (259)
T 4e6p_A           82 GLDILVNNAALFDLAPIVEITRESYE-KLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG------------  148 (259)
T ss_dssp             SCCEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC------------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC------------
Confidence            78999999997542      223344 78899999999999887643    21359999999876531            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCC--cc---
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGN--RE---  219 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~---  219 (327)
                                .++...|+.+|...+.+.+.++.++   |+++++++||.+++|....     ...........  ..   
T Consensus       149 ----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-----~~~~~~~~~~~~~~~~~~  213 (259)
T 4e6p_A          149 ----------EALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG-----VDALFARYENRPRGEKKR  213 (259)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH-----HHHHHHHHHTCCTTHHHH
T ss_pred             ----------CCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh-----hhhhhhhhccCChHHHHH
Confidence                      1335679999999999999998775   8999999999999985321     11111111000  00   


Q ss_pred             cccccc-CCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          220 EYSILL-NISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       220 ~~~~~~-~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .+.... .+.+.+++|+|+++++++....   .+.+|++++.
T Consensus       214 ~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG  255 (259)
T 4e6p_A          214 LVGEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGG  255 (259)
T ss_dssp             HHHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             HHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcC
Confidence            001111 1479999999999999987543   2457887654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.94  E-value=2e-26  Score=193.15  Aligned_cols=217  Identities=16%  Similarity=0.161  Sum_probs=159.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      ++|++|||||+|+||++++++|+++|++|++++|++.+....+ ..+...   ..++.++.+|++|.+++.++++     
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK---GVDSFAIQANVADADEVKAMIKEVVSQ   79 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999988443332222 222211   2578899999999998887775     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||....      +.+++. ..+++|+.++.++++++    ++.+ ..+||++||...+..          
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----------  147 (246)
T 3osu_A           80 FGSLDVLVNNAGITRDNLLMRMKEQEWD-DVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVG----------  147 (246)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC----------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCC----------
Confidence              78999999997542      222333 78999999999999988    4444 679999999876531          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .++...|+.+|...+.+.+.++.+   .|++++.++||.+.+|..... .   ......... ..+. 
T Consensus       148 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~---~~~~~~~~~-~~p~-  209 (246)
T 3osu_A          148 ------------NPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL-S---DELKEQMLT-QIPL-  209 (246)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS-C---HHHHHHHHT-TCTT-
T ss_pred             ------------CCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc-C---HHHHHHHHh-cCCC-
Confidence                        133567999999999999998875   489999999999999864432 1   111222111 1222 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPDA---KGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  257 (327)
                          ..+.+++|+|+++++++.....   +..+++++.
T Consensus       210 ----~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG  243 (246)
T 3osu_A          210 ----ARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG  243 (246)
T ss_dssp             ----CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ----CCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence                2688999999999999976432   456777654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.94  E-value=9.1e-26  Score=186.12  Aligned_cols=202  Identities=15%  Similarity=0.130  Sum_probs=143.9

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHH-HCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLL-DHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      .||++||||||||+||++++++|+ +.|++|++++| ++..  .+..+..   ...+++++.+|++|++++.++++++|+
T Consensus         3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r-~~~~--~~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~d~   76 (221)
T 3r6d_A            3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGR-QLKT--RIPPEII---DHERVTVIEGSFQNPGXLEQAVTNAEV   76 (221)
T ss_dssp             CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEES-SHHH--HSCHHHH---TSTTEEEEECCTTCHHHHHHHHTTCSE
T ss_pred             ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEec-Cccc--cchhhcc---CCCceEEEECCCCCHHHHHHHHcCCCE
Confidence            356679999999999999999999 89999999999 4330  2222210   025789999999999999999999999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      |||+|+..              |+. ++++++++++.+ .++||++||..+|...   .....+..       .  ....
T Consensus        77 vv~~ag~~--------------n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~---~~~~~~~~-------~--~~~~  128 (221)
T 3r6d_A           77 VFVGAMES--------------GSD-MASIVKALSRXN-IRRVIGVSMAGLSGEF---PVALEKWT-------F--DNLP  128 (221)
T ss_dssp             EEESCCCC--------------HHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCS---CHHHHHHH-------H--HTSC
T ss_pred             EEEcCCCC--------------Chh-HHHHHHHHHhcC-CCeEEEEeeceecCCC---Cccccccc-------c--cccc
Confidence            99999852              344 899999999887 8899999999887411   11110000       0  1112


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHH
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIF  241 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  241 (327)
                      +.|+.+|..+|.+++    +.+++++++||+.++++.........         ......    ...+++.+|+|+++++
T Consensus       129 ~~y~~~K~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~~~~~---------~~~~~~----~~~~~~~~dvA~~~~~  191 (221)
T 3r6d_A          129 ISYVQGERQARNVLR----ESNLNYTILRLTWLYNDPEXTDYELI---------PEGAQF----NDAQVSREAVVKAIFD  191 (221)
T ss_dssp             HHHHHHHHHHHHHHH----HSCSEEEEEEECEEECCTTCCCCEEE---------CTTSCC----CCCEEEHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHH----hCCCCEEEEechhhcCCCCCcceeec---------cCCccC----CCceeeHHHHHHHHHH
Confidence            279999999999875    37999999999999998322111000         000000    1248999999999999


Q ss_pred             hh--cCCCC--CceEEEe
Q 020334          242 LL--EYPDA--KGRYICS  255 (327)
Q Consensus       242 ~~--~~~~~--~~~y~~~  255 (327)
                      ++  ..+..  ++.+.+.
T Consensus       192 l~~~~~~~~~~~~~~~i~  209 (221)
T 3r6d_A          192 ILHAADETPFHRTSIGVG  209 (221)
T ss_dssp             HHTCSCCGGGTTEEEEEE
T ss_pred             HHHhcChhhhhcceeeec
Confidence            99  76542  3344444

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.94  E-value=8.7e-26  Score=190.59  Aligned_cols=207  Identities=19%  Similarity=0.173  Sum_probs=155.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++|++|||||+|+||++++++|+++|++|++++| +.....           ..++.++.+|++|++++.++++      
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   94 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSR-SIKPSA-----------DPDIHTVAGDISKPETADRIVREGIERF   94 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-SCCCCS-----------STTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-Chhhcc-----------cCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence            4678999999999999999999999999999999 432221           1368999999999999888775      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++|||||....      +.+++. ..+++|+.++.++++++    ++.+ ..++|++||...+...  .       
T Consensus        95 g~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~--~-------  163 (260)
T 3un1_A           95 GRIDSLVNNAGVFLAKPFVEMTQEDYD-HNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPM--V-------  163 (260)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCB--T-------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCC--C-------
Confidence             79999999987542      222333 78899999999999877    3444 6799999997654210  0       


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 ..+...|+.||...+.+.+.++.++   |+++++++||.+++|....   ...    ..... ..+.  
T Consensus       164 -----------~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~---~~~----~~~~~-~~p~--  222 (260)
T 3un1_A          164 -----------GMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA---ETH----STLAG-LHPV--  222 (260)
T ss_dssp             -----------TCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG---GGH----HHHHT-TSTT--
T ss_pred             -----------CCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH---HHH----HHHhc-cCCC--
Confidence                       1345689999999999999999887   8999999999999986432   111    11111 1122  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCCC-CceEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPDA-KGRYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~~-~~~y~~~~~  257 (327)
                         ..+.+++|+|++++++.+.... +.+++++++
T Consensus       223 ---~r~~~~~dva~av~~L~~~~~itG~~i~vdGG  254 (260)
T 3un1_A          223 ---GRMGEIRDVVDAVLYLEHAGFITGEILHVDGG  254 (260)
T ss_dssp             ---SSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             ---CCCcCHHHHHHHHHHhcccCCCCCcEEEECCC
Confidence               2688999999999999665544 446777554

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.94  E-value=7.5e-27  Score=190.64  Aligned_cols=193  Identities=18%  Similarity=0.066  Sum_probs=148.7

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---CCCEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---GCAGV   82 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~v   82 (327)
                      |+||||||+|+||++++++|+++  +|++++| ++.....+....      .. +++.+|++|++++.++++   ++|+|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r-~~~~~~~~~~~~------~~-~~~~~D~~~~~~~~~~~~~~~~id~v   70 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGR-RAGALAELAREV------GA-RALPADLADELEAKALLEEAGPLDLL   70 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECS-CHHHHHHHHHHH------TC-EECCCCTTSHHHHHHHHHHHCSEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEEC-CHHHHHHHHHhc------cC-cEEEeeCCCHHHHHHHHHhcCCCCEE
Confidence            57999999999999999999998  9999999 433222221111      12 788999999999999887   89999


Q ss_pred             EEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhh
Q 020334           83 IHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRK  156 (327)
Q Consensus        83 ih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~  156 (327)
                      ||+||....      +.+++. ..+++|+.++.++++++++.+ .++||++||..++..                     
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~~~~~---------------------  127 (207)
T 2yut_A           71 VHAVGKAGRASVREAGRDLVE-EMLAAHLLTAAFVLKHARFQK-GARAVFFGAYPRYVQ---------------------  127 (207)
T ss_dssp             EECCCCCCCBCSCC---CHHH-HHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCHHHHS---------------------
T ss_pred             EECCCcCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChhhccC---------------------
Confidence            999986542      223444 889999999999999997665 789999999877631                     


Q ss_pred             cCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHH
Q 020334          157 LDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHID  233 (327)
Q Consensus       157 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  233 (327)
                       .++.+.|+.+|...|.+++.++.+   .|++++++||+.++++....               ....     .+.+++++
T Consensus       128 -~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~---------------~~~~-----~~~~~~~~  186 (207)
T 2yut_A          128 -VPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAP---------------LGGP-----PKGALSPE  186 (207)
T ss_dssp             -STTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGG---------------GTSC-----CTTCBCHH
T ss_pred             -CCCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccc---------------cCCC-----CCCCCCHH
Confidence             134568999999999999998877   48999999999999985110               0111     14799999


Q ss_pred             HHHHHHHHhhcCCCCCceE
Q 020334          234 DVARAHIFLLEYPDAKGRY  252 (327)
Q Consensus       234 D~a~~~~~~~~~~~~~~~y  252 (327)
                      |+|++++.+++++..+.++
T Consensus       187 dva~~~~~~~~~~~~~~~~  205 (207)
T 2yut_A          187 EAARKVLEGLFREPVPALL  205 (207)
T ss_dssp             HHHHHHHHHHC--CCCSCC
T ss_pred             HHHHHHHHHHhCCCCcccc
Confidence            9999999999987665444

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.94  E-value=6.4e-27  Score=202.77  Aligned_cols=228  Identities=18%  Similarity=0.233  Sum_probs=158.8

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC--cchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH--KKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG   78 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~   78 (327)
                      |.. |++|+|||||||||++++++|+++|++|++++|+....  ......+....  ..+++++.+|+.|++++.+++++
T Consensus         1 M~~-~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~   77 (308)
T 1qyc_A            1 MGS-RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVKN   77 (308)
T ss_dssp             -CC-CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHHT
T ss_pred             CCC-CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHcC
Confidence            543 57899999999999999999999999999999943221  11111111000  24789999999999999999999


Q ss_pred             CCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcC
Q 020334           79 CAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLD  158 (327)
Q Consensus        79 ~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (327)
                      +|+|||+++...              +.++.+++++|++.+.+++||+ |+   |+..      .+|.++         .
T Consensus        78 ~d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~------~~~~~~---------~  124 (308)
T 1qyc_A           78 VDVVISTVGSLQ--------------IESQVNIIKAIKEVGTVKRFFP-SE---FGND------VDNVHA---------V  124 (308)
T ss_dssp             CSEEEECCCGGG--------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSC------TTSCCC---------C
T ss_pred             CCEEEECCcchh--------------hhhHHHHHHHHHhcCCCceEee-cc---cccC------cccccc---------C
Confidence            999999998532              4567899999998865789884 43   4311      122221         1


Q ss_pred             CC-chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc-C-CCeeeHHHH
Q 020334          159 IW-GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL-N-ISMVHIDDV  235 (327)
Q Consensus       159 ~~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~i~v~D~  235 (327)
                      .| .+.| .+|..+|.+++.    .+++++++||+.++|+..........    .....+.......+ . ++++|++|+
T Consensus       125 ~p~~~~y-~sK~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (308)
T 1qyc_A          125 EPAKSVF-EVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQAGL----TAPPRDKVVILGDGNARVVFVKEEDI  195 (308)
T ss_dssp             TTHHHHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTCTTC----SSCCSSEEEEETTSCCEEEEECHHHH
T ss_pred             CcchhHH-HHHHHHHHHHHh----cCCCeEEEEeceeccccccccccccc----cCCCCCceEEecCCCceEEEecHHHH
Confidence            22 3568 999999988753    58999999999998864322111000    00011222222222 2 799999999


Q ss_pred             HHHHHHhhcCCCC-CceEEE-e-ccccCHHHHHHHHHHhCC
Q 020334          236 ARAHIFLLEYPDA-KGRYIC-S-SAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       236 a~~~~~~~~~~~~-~~~y~~-~-~~~~s~~e~~~~i~~~~~  273 (327)
                      |++++.++.++.. ++.|++ + ++.+|+.|+++.+.+.+|
T Consensus       196 a~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g  236 (308)
T 1qyc_A          196 GTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID  236 (308)
T ss_dssp             HHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhC
Confidence            9999999987653 456664 3 468999999999999888

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.94  E-value=3e-26  Score=194.42  Aligned_cols=217  Identities=17%  Similarity=0.160  Sum_probs=142.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHh------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAI------   76 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~------   76 (327)
                      .+|+||||||+|+||++++++|+++|++|++++| ++..... ...+...   ..++.++.+|++|.+++.+++      
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCAR-NEYELNECLSKWQKK---GFQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999 4322221 1222211   246889999999998888776      


Q ss_pred             --cCCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCccc
Q 020334           77 --AGCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        77 --~~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        .++|+|||+||....      ..+++ .+.+++|+.++.++++++    ++.+ .++||++||...+...        
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~-~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~--------  158 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRSKPTLDYTAEDF-SFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSA--------  158 (266)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------------
T ss_pred             hCCCCcEEEECCCCCCCCChhhCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccCC--------
Confidence              468999999986432      12233 378999999999999888    3444 6899999998766311        


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                    ++...|+.+|...+.+++.++.++   |++++++||+.+++|........   ........ ..+.
T Consensus       159 --------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~-~~~~  220 (266)
T 1xq1_A          159 --------------SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD---EFKKVVIS-RKPL  220 (266)
T ss_dssp             ----------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------
T ss_pred             --------------CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCH---HHHHHHHh-cCCC
Confidence                          224579999999999999988775   89999999999999864321111   01111110 1111


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                           ..+++++|+|+++++++....   .+..+++.++
T Consensus       221 -----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  254 (266)
T 1xq1_A          221 -----GRFGEPEEVSSLVAFLCMPAASYITGQTICVDGG  254 (266)
T ss_dssp             --------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCC
T ss_pred             -----CCCcCHHHHHHHHHHHcCccccCccCcEEEEcCC
Confidence                 258899999999999987532   2446676543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.94  E-value=2.4e-25  Score=189.15  Aligned_cols=216  Identities=18%  Similarity=0.067  Sum_probs=159.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++| +...........     ..++.++.+|++|++++.++++      
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADL-PETDLAGAAASV-----GRGAVHHVVDLTNEVSVRALIDFTIDTF   83 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-TTSCHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHh-----CCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999 443332222111     2478899999999998888775      


Q ss_pred             -CCCEEEEccCCCCC--------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 -GCAGVIHVAAPIDI--------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 -~~d~vih~a~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                       ++|++||+||....        +.+.+. ..+++|+.++.++++++    ++.+ ..+||++||...+..         
T Consensus        84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~---------  152 (271)
T 3tzq_B           84 GRLDIVDNNAAHSDPADMLVTQMTVDVWD-DTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAA---------  152 (271)
T ss_dssp             SCCCEEEECCCCCCTTCCCGGGCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSB---------
T ss_pred             CCCCEEEECCCCCCCCCCccccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCC---------
Confidence             78999999997532        122333 78999999999999988    4444 679999999876531         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .++...|+.+|...+.+.+.++.+   +|+++++++||.+++|.........   ....... ..+.
T Consensus       153 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~---~~~~~~~-~~~~  215 (271)
T 3tzq_B          153 -------------YDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQP---IVDIFAT-HHLA  215 (271)
T ss_dssp             -------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHH---HHHHHHT-TSTT
T ss_pred             -------------CCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHH---HHHHHHh-cCCC
Confidence                         133568999999999999999887   5899999999999998654222211   1111111 1112


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEeccc
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSAK  258 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~~  258 (327)
                           ..+..++|+|+++++++....   .+..+++.+..
T Consensus       216 -----~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          216 -----GRIGEPHEIAELVCFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             -----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             -----CCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCCc
Confidence                 258899999999999997643   24466776553

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.94  E-value=7.7e-26  Score=190.10  Aligned_cols=220  Identities=17%  Similarity=0.120  Sum_probs=155.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      |+|++|||||+|+||++++++|+++|++|++++| ++...... ..+..  ....++.++.+|++|++++.++++     
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDL-SAETLEETARTHWH--AYADKVLRVRADVADEGDVNAAIAATMEQ   77 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHST--TTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHH--hcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 43222221 11101  112468999999999998888775     


Q ss_pred             --CCCEEEEccCCCCCCC--------CchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 --GCAGVIHVAAPIDIDG--------KETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 --~~d~vih~a~~~~~~~--------~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                        ++|+|||+||......        .+.....+++|+.++.++++.+.    +.+ .+++|++||...+..        
T Consensus        78 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~--------  148 (250)
T 2cfc_A           78 FGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVA--------  148 (250)
T ss_dssp             HSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--------
T ss_pred             hCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccC--------
Confidence              7899999998654221        12233788999999877666554    345 689999999876531        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    .++...|+.+|...+.+++.++.++   +++++++||+.+++|........  .......... .+
T Consensus       149 --------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~-~~  211 (250)
T 2cfc_A          149 --------------FPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQ--PELRDQVLAR-IP  211 (250)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTS--HHHHHHHHTT-CT
T ss_pred             --------------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCC--HHHHHHHHhc-CC
Confidence                          1235679999999999999998775   89999999999999864320010  1111111111 11


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPDA---KGRYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  257 (327)
                      .     ..+.+++|+|+++++++..+..   +..+++.+.
T Consensus       212 ~-----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  246 (250)
T 2cfc_A          212 Q-----KEIGTAAQVADAVMFLAGEDATYVNGAALVMDGA  246 (250)
T ss_dssp             T-----CSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred             C-----CCCcCHHHHHHHHHHHcCchhhcccCCEEEECCc
Confidence            1     2688999999999999986432   345667554

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.94  E-value=2.6e-26  Score=193.34  Aligned_cols=217  Identities=18%  Similarity=0.153  Sum_probs=134.6

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |...++++|||||+|+||.+++++|+++|++|++++| +.+.... ...+...   ..++.++.+|++|++++.++++  
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   80 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADI-NAEAAEAVAKQIVAD---GGTAISVAVDVSDPESAKAMADRT   80 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHH
Confidence            4455789999999999999999999999999999999 4333222 2222221   2578899999999998887775  


Q ss_pred             -----CCCEEEEccCCCC---------CCCCchHHHHHHHHHhHHHHHHHH----HHhcCCccEEEEeccceeeeecCCC
Q 020334           78 -----GCAGVIHVAAPID---------IDGKETEEVMTQRAVNGTIGILKS----CLKSGTVKRFVYTSSGSTVYFSGKD  139 (327)
Q Consensus        78 -----~~d~vih~a~~~~---------~~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~v~~~~~~~  139 (327)
                           ++|++|||||...         .+.+.+ ...+++|+.++..+.++    +++.+ ..+||++||...+.     
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~-----  153 (253)
T 3qiv_A           81 LAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYY-KKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAWL-----  153 (253)
T ss_dssp             HHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC----------
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccccCCHHHH-HHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCccccC-----
Confidence                 7899999998732         122233 37899999996655554    44444 67999999987662     


Q ss_pred             CCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhC
Q 020334          140 VDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLG  216 (327)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~  216 (327)
                                          +...|+.+|...+.+++.++.++   +++++.++||.+++|......+..   ...... 
T Consensus       154 --------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~~~~~-  209 (253)
T 3qiv_A          154 --------------------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKE---MVDDIV-  209 (253)
T ss_dssp             --------------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------
T ss_pred             --------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHH---HHHHHh-
Confidence                                13459999999999999999876   799999999999998643221111   111100 


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ...+.     ..+..++|+|+++++++....   .+.+|+++++
T Consensus       210 ~~~~~-----~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG  248 (253)
T 3qiv_A          210 KGLPL-----SRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGG  248 (253)
T ss_dssp             ---------------CCHHHHHHHHHHSGGGTTCCSCEEEC---
T ss_pred             ccCCC-----CCCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            11111     256788999999999997543   3557776543

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.94  E-value=1.8e-25  Score=187.22  Aligned_cols=215  Identities=18%  Similarity=0.140  Sum_probs=155.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---CCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---GCA   80 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d   80 (327)
                      .+++||||||+|+||++++++|+++|++|++++| ++....   .+...   ..+++++.+|++|++++.++++   ++|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~---~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id   78 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSR-TQADLD---SLVRE---CPGIEPVCVDLGDWEATERALGSVGPVD   78 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHH---HHHHH---STTCEEEECCTTCHHHHHHHHTTCCCCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHH---HHHHH---cCCCCEEEEeCCCHHHHHHHHHHcCCCC
Confidence            3578999999999999999999999999999999 432222   11110   1256788999999999999886   589


Q ss_pred             EEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccCCCCCCh
Q 020334           81 GVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDE  151 (327)
Q Consensus        81 ~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~  151 (327)
                      +|||+||.....     ..+.....+++|+.++.++++++.+.    +..++||++||...+..                
T Consensus        79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------  142 (244)
T 3d3w_A           79 LLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA----------------  142 (244)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC----------------
T ss_pred             EEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC----------------
Confidence            999999865421     11223478999999998888877653    21479999999876521                


Q ss_pred             hHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC--CchHHHHHHHHhCCccccccccC
Q 020334          152 DYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKF--AGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       152 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                            .++.+.|+.+|...|.+++.++.+   .+++++++||+.++++......  +.....+   ....  +.     
T Consensus       143 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~---~~~~--~~-----  206 (244)
T 3d3w_A          143 ------VTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTM---LNRI--PL-----  206 (244)
T ss_dssp             ------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHH---HHTC--TT-----
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHH---HhhC--CC-----
Confidence                  133567999999999999998876   3899999999999998532111  1111111   1111  11     


Q ss_pred             CCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          227 ISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ..+++++|+|+++++++....   .+..|+++++
T Consensus       207 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  240 (244)
T 3d3w_A          207 GKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            378999999999999997642   3447777654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.94  E-value=2.5e-26  Score=195.74  Aligned_cols=224  Identities=17%  Similarity=0.067  Sum_probs=158.0

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      ..+|+||||||+|+||++++++|+++|++|++++|+++..... ...+...   ..++.++.+|++|++++.++++    
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL---GAQGVAIQADISKPSEVVALFDKAVS   95 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999933222211 1222211   2468899999999999888776    


Q ss_pred             ---CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 ---GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ---~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                         ++|+|||+||.....      .+.+ ...+++|+.++.++++++.+.- ..++||++||...+..+           
T Consensus        96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-----------  163 (274)
T 1ja9_A           96 HFGGLDFVMSNSGMEVWCDELEVTQELF-DKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG-----------  163 (274)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS-----------
T ss_pred             HcCCCCEEEECCCCCCCcccccCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCC-----------
Confidence               789999999865421      1223 3789999999999999887651 02699999998765111           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC----CC----chH-HHHHHHHh
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPK----FA----GSV-RSTLAMVL  215 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~----~~----~~~-~~~~~~~~  215 (327)
                                .++...|+.+|...|.+++.+++++   +++++++||+.++++.....    .+    ... ........
T Consensus       164 ----------~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (274)
T 1ja9_A          164 ----------IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLA  233 (274)
T ss_dssp             ----------CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHH
T ss_pred             ----------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHH
Confidence                      1234579999999999999998775   89999999999988742210    00    000 11111111


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      . ..+     ...+++++|+|+++++++..+.   .+.+|+++++
T Consensus       234 ~-~~~-----~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          234 N-MNP-----LKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  272 (274)
T ss_dssp             H-TST-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             h-cCC-----CCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence            1 111     1379999999999999997643   3457887654

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.94  E-value=1.9e-25  Score=188.45  Aligned_cols=217  Identities=18%  Similarity=0.151  Sum_probs=151.8

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      ..+|++|||||+|+||.+++++|+++|++|++++|+..........+      ..++.++.+|++|++++.++++     
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL------GAAVRFRNADVTNEADATAALAFAKQE   78 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh------CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999433222222211      2468999999999998887775     


Q ss_pred             --CCCEEEEccCCCCCC----------CCchHHHHHHHHHhHHHHHHHHHHhc---------CCccEEEEeccceeeeec
Q 020334           78 --GCAGVIHVAAPIDID----------GKETEEVMTQRAVNGTIGILKSCLKS---------GTVKRFVYTSSGSTVYFS  136 (327)
Q Consensus        78 --~~d~vih~a~~~~~~----------~~~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~~~v~~SS~~v~~~~  136 (327)
                        ++|++||+||.....          .+++. ..+++|+.++..+++++.+.         +...++|++||...+.. 
T Consensus        79 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~-  156 (257)
T 3tpc_A           79 FGHVHGLVNCAGTAPGEKILGRSGPHALDSFA-RTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG-  156 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTEECCHHHHH-HHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC-
T ss_pred             cCCCCEEEECCCCCCCCccccccccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC-
Confidence              789999999975421          12343 78999999999999888753         12468999999876531 


Q ss_pred             CCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHH
Q 020334          137 GKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAM  213 (327)
Q Consensus       137 ~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~  213 (327)
                                           .++...|+.+|...+.+.+.++.+   .|++++.++||.+.++........    ....
T Consensus       157 ---------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~----~~~~  211 (257)
T 3tpc_A          157 ---------------------QIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQD----VQDA  211 (257)
T ss_dssp             ---------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------
T ss_pred             ---------------------CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHH----HHHH
Confidence                                 133567999999999999998877   589999999999999854321111    1111


Q ss_pred             HhCCccccccccCCCeeeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 020334          214 VLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKG-RYICSSA  257 (327)
Q Consensus       214 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~  257 (327)
                      .. ...+.    ...+.+++|+|++++++++.....| .+++.|.
T Consensus       212 ~~-~~~p~----~~r~~~~~dva~~v~~l~s~~~itG~~i~vdGG  251 (257)
T 3tpc_A          212 LA-ASVPF----PPRLGRAEEYAALVKHICENTMLNGEVIRLDGA  251 (257)
T ss_dssp             ---CCSSS----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             HH-hcCCC----CCCCCCHHHHHHHHHHHcccCCcCCcEEEECCC
Confidence            11 11111    0268899999999999998755445 5567544

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.94  E-value=4.1e-26  Score=197.63  Aligned_cols=222  Identities=19%  Similarity=0.133  Sum_probs=156.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC------CcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE------HKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG   78 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~   78 (327)
                      ||+|||||||||||++++++|+++|++|++++|+...      +...+..+.     ..+++++.+|+.|++++.+++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~-----~~~v~~v~~D~~d~~~l~~~~~~   76 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQ-----SLGVILLEGDINDHETLVKAIKQ   76 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHH-----HTTCEEEECCTTCHHHHHHHHTT
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHH-----hCCCEEEEeCCCCHHHHHHHHhC
Confidence            5789999999999999999999999999999994311      111111111     14689999999999999999999


Q ss_pred             CCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcC
Q 020334           79 CAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLD  158 (327)
Q Consensus        79 ~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (327)
                      +|+|||+++...              +.++.++++++++.+.+++||+ |   +|+..      .+|..+         .
T Consensus        77 ~d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~------~~~~~~---------~  123 (307)
T 2gas_A           77 VDIVICAAGRLL--------------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLD------VDRHDA---------V  123 (307)
T ss_dssp             CSEEEECSSSSC--------------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSC------TTSCCC---------C
T ss_pred             CCEEEECCcccc--------------cccHHHHHHHHHhcCCceEEee-c---ccccC------cccccC---------C
Confidence            999999998642              4567899999998765789883 3   34311      122221         1


Q ss_pred             CC-chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc-C-CCeeeHHHH
Q 020334          159 IW-GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL-N-ISMVHIDDV  235 (327)
Q Consensus       159 ~~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~i~v~D~  235 (327)
                      .| .+.| .+|..+|.+++    +.+++++++||+.++++.........    ..............+ . ++++|++|+
T Consensus       124 ~p~~~~y-~sK~~~e~~~~----~~~i~~~~lrp~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dv  194 (307)
T 2gas_A          124 EPVRQVF-EEKASIRRVIE----AEGVPYTYLCCHAFTGYFLRNLAQLD----ATDPPRDKVVILGDGNVKGAYVTEADV  194 (307)
T ss_dssp             TTHHHHH-HHHHHHHHHHH----HHTCCBEEEECCEETTTTGGGTTCTT----CSSCCSSEEEEETTSCSEEEEECHHHH
T ss_pred             CcchhHH-HHHHHHHHHHH----HcCCCeEEEEcceeeccccccccccc----cccCCCCeEEEecCCCcceEEeeHHHH
Confidence            22 3578 99999998875    35899999999988886432111100    000011122222122 2 789999999


Q ss_pred             HHHHHHhhcCCCC-CceEEE-e-ccccCHHHHHHHHHHhCC
Q 020334          236 ARAHIFLLEYPDA-KGRYIC-S-SAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       236 a~~~~~~~~~~~~-~~~y~~-~-~~~~s~~e~~~~i~~~~~  273 (327)
                      |++++.++.++.. ++.|++ + ++.+|+.|+++.+.+.+|
T Consensus       195 a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g  235 (307)
T 2gas_A          195 GTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIG  235 (307)
T ss_dssp             HHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhC
Confidence            9999999987653 455654 4 468999999999999887

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.94  E-value=9.7e-26  Score=189.16  Aligned_cols=220  Identities=13%  Similarity=0.094  Sum_probs=150.0

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |...+++||||||+|+||++++++|+++|++|++++++++...... ..+...   ..++.++.+|++|++++.++++  
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   77 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA---GINVVVAKGDVKNPEDVENMVKTA   77 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT---TCCEEEEESCTTSHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc---CCcEEEEECCCCCHHHHHHHHHHH
Confidence            6655789999999999999999999999999999954244332222 222211   2468999999999998887775  


Q ss_pred             -----CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCc
Q 020334           78 -----GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDM  142 (327)
Q Consensus        78 -----~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~  142 (327)
                           ++|+|||+||....      +.+++. +.+++|+.++.++++++.+    .+ .++||++||...+. +      
T Consensus        78 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~-~------  148 (247)
T 2hq1_A           78 MDAFGRIDILVNNAGITRDTLMLKMSEKDWD-DVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGII-G------  148 (247)
T ss_dssp             HHHHSCCCEEEECC---------------CH-HHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC-------------
T ss_pred             HHhcCCCCEEEECCCCCCCCccccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcc-C------
Confidence                 78999999986531      233444 8899999998888877654    34 67999999975432 1      


Q ss_pred             ccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcc
Q 020334          143 LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNRE  219 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (327)
                                     .++..+|+.+|...|.+++.++.++   ++++++++|+.+.++.... ...   ......... .
T Consensus       149 ---------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~---~~~~~~~~~-~  208 (247)
T 2hq1_A          149 ---------------NAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV-LPD---KVKEMYLNN-I  208 (247)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCH---HHHHHHHTT-S
T ss_pred             ---------------CCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh-cch---HHHHHHHhh-C
Confidence                           1224679999999999999988765   8999999999998764221 111   111111111 1


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      +.     ..+++++|+|+++++++..+.   .+..|+++++
T Consensus       209 ~~-----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  244 (247)
T 2hq1_A          209 PL-----KRFGTPEEVANVVGFLASDDSNYITGQVINIDGG  244 (247)
T ss_dssp             TT-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCCCCHHHHHHHHHHHcCcccccccCcEEEeCCC
Confidence            11     268999999999999987542   3457887654

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.94  E-value=2.2e-26  Score=200.55  Aligned_cols=222  Identities=16%  Similarity=0.142  Sum_probs=156.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC--cchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH--KKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      +||+|||||||||||++++++|+++|++|++++|+....  ......+...  ...+++++.+|+.|++++.++++++|+
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~v~~v~~D~~d~~~l~~a~~~~d~   80 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEF--RSMGVTIIEGEMEEHEKMVSVLKQVDI   80 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHH--HHTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHh--hcCCcEEEEecCCCHHHHHHHHcCCCE
Confidence            567899999999999999999999999999999943011  1111111000  014789999999999999999999999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC-
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW-  160 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~-  160 (327)
                      |||+++...              +.++.+++++|++.+.+++||+ |   +|+..      .+|.++         ..| 
T Consensus        81 vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~------~~~~~~---------~~p~  127 (321)
T 3c1o_A           81 VISALPFPM--------------ISSQIHIINAIKAAGNIKRFLP-S---DFGCE------EDRIKP---------LPPF  127 (321)
T ss_dssp             EEECCCGGG--------------SGGGHHHHHHHHHHCCCCEEEC-S---CCSSC------GGGCCC---------CHHH
T ss_pred             EEECCCccc--------------hhhHHHHHHHHHHhCCccEEec-c---ccccC------cccccc---------CCCc
Confidence            999998532              5567899999998765788883 3   34311      122221         112 


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHH----HHhCCccccc-cccC-CCeeeHHH
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLA----MVLGNREEYS-ILLN-ISMVHIDD  234 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~-~~~i~v~D  234 (327)
                      .+.| .+|..+|.+++    +.+++++++||+.++++..        ..+..    ...++..... .+.. ++++|++|
T Consensus       128 ~~~y-~sK~~~e~~~~----~~~~~~~~lrp~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (321)
T 3c1o_A          128 ESVL-EKKRIIRRAIE----AAALPYTYVSANCFGAYFV--------NYLLHPSPHPNRNDDIVIYGTGETKFVLNYEED  194 (321)
T ss_dssp             HHHH-HHHHHHHHHHH----HHTCCBEEEECCEEHHHHH--------HHHHCCCSSCCTTSCEEEETTSCCEEEEECHHH
T ss_pred             chHH-HHHHHHHHHHH----HcCCCeEEEEeceeccccc--------cccccccccccccCceEEecCCCcceeEeeHHH
Confidence            3569 99999998885    3589999999998887521        11111    0112222222 2222 79999999


Q ss_pred             HHHHHHHhhcCCCC-CceEEE-e-ccccCHHHHHHHHHHhCC
Q 020334          235 VARAHIFLLEYPDA-KGRYIC-S-SAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       235 ~a~~~~~~~~~~~~-~~~y~~-~-~~~~s~~e~~~~i~~~~~  273 (327)
                      +|++++.++.++.. ++.|++ + ++.+|+.|+++.+.+.+|
T Consensus       195 va~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g  236 (321)
T 3c1o_A          195 IAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSG  236 (321)
T ss_dssp             HHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcC
Confidence            99999999988653 456665 3 478999999999999887

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.94  E-value=5.1e-26  Score=192.60  Aligned_cols=223  Identities=15%  Similarity=0.159  Sum_probs=155.8

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      ..+|++|||||+|+||++++++|+++|++|++++| ++...... ..+....  ..++.++.+|++|++++.++++    
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVAR-QVDRLHEAARSLKEKF--GVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHHH--CCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999 43222211 1121100  1468899999999998887775    


Q ss_pred             ---CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 ---GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 ---~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                         ++|++||+||....      ..+++. ..+++|+.++.++++++.+    .+ .++||++||...+..         
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~---------  150 (263)
T 3ai3_A           82 SFGGADILVNNAGTGSNETIMEAADEKWQ-FYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQP---------  150 (263)
T ss_dssp             HHSSCSEEEECCCCCCCCCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC---------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCC---------
Confidence               78999999986542      122333 7899999999888887653    34 679999999877631         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC-------chHHHHHHHH
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFA-------GSVRSTLAMV  214 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~-------~~~~~~~~~~  214 (327)
                                   .++...|+.+|...+.+.+.++.+   .|++++++||+.+++|.......       ..........
T Consensus       151 -------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
T 3ai3_A          151 -------------LWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSV  217 (263)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHH
T ss_pred             -------------CCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHH
Confidence                         123457999999999999998876   48999999999999985221000       0000111111


Q ss_pred             hCCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          215 LGNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       215 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .....+     ...+++++|+|+++++++..+.   .+..|++++.
T Consensus       218 ~~~~~p-----~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG  258 (263)
T 3ai3_A          218 ADEHAP-----IKRFASPEELANFFVFLCSERATYSVGSAYFVDGG  258 (263)
T ss_dssp             HHHHCT-----TCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTT
T ss_pred             HhcCCC-----CCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence            100011     1368999999999999997643   2446777543

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.94  E-value=9.7e-26  Score=190.63  Aligned_cols=218  Identities=21%  Similarity=0.143  Sum_probs=157.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++| +.+... ....+....  ..++.++.+|++|++++.++++     
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGR-STADIDACVADLDQLG--SGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHTTS--SSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhC--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4589999999999999999999999999999999 433222 222332221  1478999999999998887765     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||....      +.+++. ..+++|+.++.++++++.+.    + ..++|++||......+         
T Consensus        86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~---------  154 (262)
T 3pk0_A           86 FGGIDVVCANAGVFPDAPLATMTPEQLN-GIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPITG---------  154 (262)
T ss_dssp             HSCCSEEEECCCCCCCCCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTBC---------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCC---------
Confidence              78999999996542      222333 77999999999988877654    4 6799999997642101         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .++...|+.+|...+.+.+.++.+   .|++++.++||.+++|.......    ........ ..+. 
T Consensus       155 ------------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~----~~~~~~~~-~~p~-  216 (262)
T 3pk0_A          155 ------------YPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGE----EYIASMAR-SIPA-  216 (262)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCH----HHHHHHHT-TSTT-
T ss_pred             ------------CCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCH----HHHHHHHh-cCCC-
Confidence                        133567999999999999999887   48999999999999985322111    11111111 1122 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                          ..+..++|+|+++++++....   .+..++++|.
T Consensus       217 ----~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG  250 (262)
T 3pk0_A          217 ----GALGTPEDIGHLAAFLATKEAGYITGQAIAVDGG  250 (262)
T ss_dssp             ----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence                258899999999999987543   3446677654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.94  E-value=1e-25  Score=189.12  Aligned_cols=217  Identities=18%  Similarity=0.105  Sum_probs=154.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+++||||||+|+||++++++|+++|++|++++| ++.....+ ..+...  ...++.++.+|++|++++.++++     
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGT-SGERAKAVAEEIANK--YGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHHH--HCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhh--cCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999 43222221 111110  02468899999999999888775     


Q ss_pred             --CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|+|||+||.....      .+++ .+.+++|+.++.++++++    ++.+ .++||++||...+. +         
T Consensus        83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~-~---------  150 (248)
T 2pnf_A           83 VDGIDILVNNAGITRDKLFLRMSLLDW-EEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFT-G---------  150 (248)
T ss_dssp             SSCCSEEEECCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHH-C---------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHH-HHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcC-C---------
Confidence              789999999865421      1233 378999999997666654    3444 68999999976542 1         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .++...|+.+|...+.+++.++++.   +++++++||+.++++.... ....   ........ .+. 
T Consensus       151 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~-~~~~---~~~~~~~~-~~~-  212 (248)
T 2pnf_A          151 ------------NVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV-LSEE---IKQKYKEQ-IPL-  212 (248)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHH---HHHHHHHT-CTT-
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh-ccHH---HHHHHHhc-CCC-
Confidence                        1224579999999999999988764   8999999999999986432 1111   11111111 111 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                          ..+++++|+|+++++++....   .+.+|+++++
T Consensus       213 ----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          213 ----GRFGSPEEVANVVLFLCSELASYITGEVIHVNGG  246 (248)
T ss_dssp             ----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----CCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence                268999999999999987532   3457777654

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.94  E-value=2.3e-25  Score=190.11  Aligned_cols=227  Identities=15%  Similarity=0.200  Sum_probs=154.5

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      .++|++|||||+|+||++++++|+++|++|++++|+........ ..+....  ..++.++.+|++|++++.++++    
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  100 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS--SGTVLHHPADMTKPSEIADMMAMVAD  100 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC--SSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc--CCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999998433222222 2222211  2578999999999998887765    


Q ss_pred             ---CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 ---GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 ---~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                         ++|++||+||....      +.+++. ..+++|+.++.++++++.    +.+ ..+||++||...+..         
T Consensus       101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~---------  169 (281)
T 3v2h_A          101 RFGGADILVNNAGVQFVEKIEDFPVEQWD-RIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVA---------  169 (281)
T ss_dssp             HTSSCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC---------
T ss_pred             HCCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccC---------
Confidence               68999999997542      223343 789999999999998873    444 579999999876521         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc---
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR---  218 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~---  218 (327)
                                   .+....|+.+|...+.+.+.++.++   |++++.++||.+.+|......+......  ......   
T Consensus       170 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~--~~~~~~~~~  234 (281)
T 3v2h_A          170 -------------SPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTR--GITEEQVIN  234 (281)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-------------------------
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhc--CCCHHHHHH
Confidence                         1234679999999999999998775   8999999999999986433211110000  000000   


Q ss_pred             cccccc-cCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          219 EEYSIL-LNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       219 ~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ..+... ....+++++|+|+++++++....   .|..++++|+
T Consensus       235 ~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG  277 (281)
T 3v2h_A          235 EVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGG  277 (281)
T ss_dssp             -----CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTT
T ss_pred             HHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCC
Confidence            001111 11479999999999999997653   3446777654

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.94  E-value=2.4e-26  Score=194.08  Aligned_cols=220  Identities=15%  Similarity=0.117  Sum_probs=157.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|+||||||+|+||++++++|+++|++|++++|+.+.....+ ..+...   ..++.++.+|++|++++.++++      
T Consensus         7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD---GGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT---TCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc---CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999424333222 222211   2468899999999999888776      


Q ss_pred             -CCCEEEEccCC-CCCC-----CCchHHHHHHHHHhHHHHHHHHHHhc----C----CccEEEEeccceeeeecCCCCCc
Q 020334           78 -GCAGVIHVAAP-IDID-----GKETEEVMTQRAVNGTIGILKSCLKS----G----TVKRFVYTSSGSTVYFSGKDVDM  142 (327)
Q Consensus        78 -~~d~vih~a~~-~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~----~~~~~v~~SS~~v~~~~~~~~~~  142 (327)
                       ++|+|||+||. ....     ..+.....+++|+.++.++++++.+.    +    ...++|++||...+..+      
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------  157 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG------  157 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC------
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC------
Confidence             79999999996 3211     11222378899999999888866532    1    12699999997654200      


Q ss_pred             ccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcc
Q 020334          143 LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNRE  219 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (327)
                                     .++...|+.+|...|.+++.++.++   +++++++||+.++++..... .   .......... .
T Consensus       158 ---------------~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~---~~~~~~~~~~-~  217 (258)
T 3afn_B          158 ---------------GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK-T---QDVRDRISNG-I  217 (258)
T ss_dssp             ---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC-C---HHHHHHHHTT-C
T ss_pred             ---------------CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc-C---HHHHHHHhcc-C
Confidence                           1335679999999999999988765   89999999999999864431 1   1112222111 1


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCC----CCceEEEeccc
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPD----AKGRYICSSAK  258 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~----~~~~y~~~~~~  258 (327)
                      +.     ..+++++|+|+++++++....    .+..|+++++.
T Consensus       218 ~~-----~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          218 PM-----GRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             TT-----CSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             CC-----CcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence            11     268999999999999987642    24477886654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.94  E-value=4.1e-26  Score=185.54  Aligned_cols=187  Identities=17%  Similarity=0.119  Sum_probs=144.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC---CCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG---CAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---~d~   81 (327)
                      +|+||||||+|+||++++++|+ +|++|++++| ++.                   .+.+|++|++++.+++++   +|+
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r-~~~-------------------~~~~D~~~~~~~~~~~~~~~~~d~   61 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGR-HSG-------------------DVTVDITNIDSIKKMYEQVGKVDA   61 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEES-SSS-------------------SEECCTTCHHHHHHHHHHHCCEEE
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEec-Ccc-------------------ceeeecCCHHHHHHHHHHhCCCCE
Confidence            4579999999999999999999 9999999999 321                   356999999999888764   899


Q ss_pred             EEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCCChhHh
Q 020334           82 VIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYI  154 (327)
Q Consensus        82 vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~  154 (327)
                      |||+||.....      .+++ .+.+++|+.++.++++++.+.- ..++||++||...+..                   
T Consensus        62 vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~-------------------  121 (202)
T 3d7l_A           62 IVSATGSATFSPLTELTPEKN-AVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDP-------------------  121 (202)
T ss_dssp             EEECCCCCCCCCGGGCCHHHH-HHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSC-------------------
T ss_pred             EEECCCCCCCCChhhCCHHHH-HHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCC-------------------
Confidence            99999965321      1222 3678899999999999998761 0269999999765421                   


Q ss_pred             hhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeH
Q 020334          155 RKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHI  232 (327)
Q Consensus       155 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  232 (327)
                         .++...|+.+|...|.+++.++.++  +++++++||+.++++...             . +...     ..++++++
T Consensus       122 ---~~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~-------------~-~~~~-----~~~~~~~~  179 (202)
T 3d7l_A          122 ---IVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDK-------------L-EPFF-----EGFLPVPA  179 (202)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHH-------------H-GGGS-----TTCCCBCH
T ss_pred             ---CCccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhh-------------h-hhhc-----cccCCCCH
Confidence               1335679999999999999988664  899999999999998421             0 1111     12479999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEE
Q 020334          233 DDVARAHIFLLEYPDAKGRYIC  254 (327)
Q Consensus       233 ~D~a~~~~~~~~~~~~~~~y~~  254 (327)
                      +|+|++++.++.....+.+|++
T Consensus       180 ~dva~~~~~~~~~~~~G~~~~v  201 (202)
T 3d7l_A          180 AKVARAFEKSVFGAQTGESYQV  201 (202)
T ss_dssp             HHHHHHHHHHHHSCCCSCEEEE
T ss_pred             HHHHHHHHHhhhccccCceEec
Confidence            9999999998865545557765

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.94  E-value=7.5e-26  Score=191.75  Aligned_cols=222  Identities=20%  Similarity=0.203  Sum_probs=156.3

Q ss_pred             CCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            2 EEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      ..+++++|||||+|+||.+++++|+++|++|++++|++......+......  ...++.++.+|++|++++.++++    
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~   81 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKD--VEERLQFVQADVTKKEDLHKIVEEAMS   81 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGG--GGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh--cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999988443332322222111  12478999999999998887775    


Q ss_pred             ---CCCEEEEccCC--CC------CCCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCc
Q 020334           78 ---GCAGVIHVAAP--ID------IDGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDM  142 (327)
Q Consensus        78 ---~~d~vih~a~~--~~------~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~  142 (327)
                         ++|+|||+||.  ..      ...+++ .+.+++|+.++.++++++    ++.+ ..++|++||...+....     
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~-----  154 (264)
T 3i4f_A           82 HFGKIDFLINNAGPYVFERKKLVDYEEDEW-NEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAPG-----  154 (264)
T ss_dssp             HHSCCCEEECCCCCCCCSCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCCC-----
T ss_pred             HhCCCCEEEECCcccccCCCccccCCHHHH-HHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccCC-----
Confidence               78999999993  21      112233 378999999999999987    4545 67999999875431010     


Q ss_pred             ccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcc
Q 020334          143 LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNRE  219 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (327)
                                     ..+...|+.+|...+.+++.++.+   .|+++++++||.++++.....    ........ ....
T Consensus       155 ---------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~-~~~~  214 (264)
T 3i4f_A          155 ---------------WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT----IQEARQLK-EHNT  214 (264)
T ss_dssp             ---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC----HHHHHHC------
T ss_pred             ---------------CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc----cHHHHHHH-hhcC
Confidence                           133568999999999999998877   489999999999999864331    11111111 1111


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      +.     ..+.+++|+|+++++++....   .+.+++++|.
T Consensus       215 p~-----~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG  250 (264)
T 3i4f_A          215 PI-----GRSGTGEDIARTISFLCEDDSDMITGTIIEVTGA  250 (264)
T ss_dssp             --------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCS
T ss_pred             CC-----CCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCc
Confidence            12     268899999999999997643   2446777543

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.94  E-value=7.7e-26  Score=191.65  Aligned_cols=219  Identities=16%  Similarity=0.159  Sum_probs=151.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCC----CCCCCeEEEeCCCCChhHHHHHhcC-
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLP----GASERLQIFNADLNDPESFDAAIAG-   78 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~-   78 (327)
                      +++||||||+|+||++++++|+++|++|++++| ++.....+ ..+....    ....++.++.+|++|++++.++++. 
T Consensus         7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDL-DRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            578999999999999999999999999999999 43222211 1111100    0014688999999999988877653 


Q ss_pred             ------C-CEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCC
Q 020334           79 ------C-AGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVD  141 (327)
Q Consensus        79 ------~-d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~  141 (327)
                            + |+|||+||....      ..+++ ...+++|+.++.++++++.+.    +..++||++||...+. +     
T Consensus        86 ~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-~-----  158 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAGITQDEFLLHMSEDDW-DKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV-G-----  158 (264)
T ss_dssp             HHHHSSCCSEEEECCCCCCCBCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH-C-----
T ss_pred             HHHhCCCCeEEEECCCcCCCcchhhCCHHHH-HHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc-C-----
Confidence                  4 999999987542      22233 378999999999999987764    1136999999976542 1     


Q ss_pred             cccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc
Q 020334          142 MLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR  218 (327)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~  218 (327)
                                      .++...|+.+|...+.+++.++.+   .|++++++||+.+++|..... ..   ........ .
T Consensus       159 ----------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~---~~~~~~~~-~  217 (264)
T 2pd6_A          159 ----------------NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV-PQ---KVVDKITE-M  217 (264)
T ss_dssp             ----------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--------------CTGG-G
T ss_pred             ----------------CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc-CH---HHHHHHHH-h
Confidence                            133567999999999999998877   589999999999999864321 10   11110000 0


Q ss_pred             cccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          219 EEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       219 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .+.     ..+++++|+|+++++++....   .+..++++++
T Consensus       218 ~~~-----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  254 (264)
T 2pd6_A          218 IPM-----GHLGDPEDVADVVAFLASEDSGYITGTSVEVTGG  254 (264)
T ss_dssp             CTT-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCC-----CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence            111     258899999999999987532   2346667554

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=1.8e-25  Score=186.94  Aligned_cols=208  Identities=20%  Similarity=0.157  Sum_probs=154.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      |+|+||||||+|+||++++++|+++|++|++++| ++. .             .++.++.+|++|++++.++++      
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r-~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~~   65 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARGYRVVVLDL-RRE-G-------------EDLIYVEGDVTREEDVRRAVARAQEEA   65 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEES-SCC-S-------------SSSEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcc-Ccc-c-------------cceEEEeCCCCCHHHHHHHHHHHHhhC
Confidence            3578999999999999999999999999999999 332 1             245889999999999988876      


Q ss_pred             CCCEEEEccCCCCCCC-----Cc----hHHHHHHHHHhHHHHHHHHHHhcC---------CccEEEEeccceeeeecCCC
Q 020334           78 GCAGVIHVAAPIDIDG-----KE----TEEVMTQRAVNGTIGILKSCLKSG---------TVKRFVYTSSGSTVYFSGKD  139 (327)
Q Consensus        78 ~~d~vih~a~~~~~~~-----~~----~~~~~~~~nv~~~~~l~~~~~~~~---------~~~~~v~~SS~~v~~~~~~~  139 (327)
                      ++|++||+||......     .+    ...+.+++|+.++.++++++.+.-         ..++||++||...+..    
T Consensus        66 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----  141 (242)
T 1uay_A           66 PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG----  141 (242)
T ss_dssp             CEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC----
T ss_pred             CceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC----
Confidence            7899999998654211     11    334889999999999999887541         1239999999877631    


Q ss_pred             CCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhC
Q 020334          140 VDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLG  216 (327)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~  216 (327)
                                        .++...|+.+|...+.+++.++.++   |++++++||+.++++..... ..   ........
T Consensus       142 ------------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~---~~~~~~~~  199 (242)
T 1uay_A          142 ------------------QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL-PE---KAKASLAA  199 (242)
T ss_dssp             ------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS-CH---HHHHHHHT
T ss_pred             ------------------CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc-ch---hHHHHHHh
Confidence                              1335679999999999999988764   89999999999999853321 11   11111121


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCCCC-CceEEEecc
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYPDA-KGRYICSSA  257 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~y~~~~~  257 (327)
                      . .++    ...+++++|+|+++++++..... +..|++.+.
T Consensus       200 ~-~~~----~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG  236 (242)
T 1uay_A          200 Q-VPF----PPRLGRPEEYAALVLHILENPMLNGEVVRLDGA  236 (242)
T ss_dssp             T-CCS----SCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             h-CCC----cccCCCHHHHHHHHHHHhcCCCCCCcEEEEcCC
Confidence            1 111    02588999999999999987444 446777543

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.94  E-value=2e-25  Score=188.65  Aligned_cols=220  Identities=15%  Similarity=0.101  Sum_probs=154.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHh------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAI------   76 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~------   76 (327)
                      .+|++|||||+|+||++++++|+++|++|++++| +++.... ...+...   ..++.++.+|++|++++.+++      
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSR-NQKELNDCLTQWRSK---GFKVEASVCDLSSRSERQELMNTVANH   83 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 4322221 2222211   246888999999999888776      


Q ss_pred             --cCCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCccc
Q 020334           77 --AGCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        77 --~~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        .++|++||+||....      +.+++. ..+++|+.++.++++++.    +.+ .++||++||...+..         
T Consensus        84 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~---------  152 (260)
T 2ae2_A           84 FHGKLNILVNNAGIVIYKEAKDYTVEDYS-LIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALA---------  152 (260)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSC---------
T ss_pred             cCCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccC---------
Confidence              468999999996532      122333 789999999999988874    334 679999999865521         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc-hHHHHHHHHhCCccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAG-SVRSTLAMVLGNREE  220 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~  220 (327)
                                   .++...|+.+|...+.+.+.++.++   |+++++++||.+.++........ ........... ..+
T Consensus       153 -------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~  218 (260)
T 2ae2_A          153 -------------VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLID-RCA  218 (260)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHH-TST
T ss_pred             -------------CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHh-cCC
Confidence                         1234679999999999999998775   89999999999988742110010 00010001111 111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .     ..+++++|+|+++++++....   .+..+++++.
T Consensus       219 ~-----~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  253 (260)
T 2ae2_A          219 L-----RRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG  253 (260)
T ss_dssp             T-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C-----CCCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            1     268999999999999987532   2446677554

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.94  E-value=6.2e-26  Score=190.10  Aligned_cols=216  Identities=17%  Similarity=0.178  Sum_probs=151.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEE-EcCCCCCcchh-hhhhCCCCCCCCeEE-EeCCCCChhHHHHHhc----
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTT-VRSDPEHKKDL-SFLTNLPGASERLQI-FNADLNDPESFDAAIA----   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~-~~~~~~~~~~~~~~~-~~~D~~d~~~~~~~~~----   77 (327)
                      +|+||||||+|+||++++++|+++|++|+++ +| ++.....+ ..+...   ..++.. +.+|++|.+++.++++    
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQ-NREKAEEVAEEARRR---GSPLVAVLGANLLEAEAATALVHQAAE   76 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESS-CHHHHHHHHHHHHHT---TCSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHHHhc---CCceEEEEeccCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999998 67 43322221 122111   235666 8999999998887754    


Q ss_pred             ---CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHH----HHHHhcCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 ---GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGIL----KSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 ---~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~----~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                         ++|+|||+||....      ..+++ ...+++|+.++.+++    +.+++.+ .++||++||...+. +        
T Consensus        77 ~~~~~d~li~~Ag~~~~~~~~~~~~~~~-~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~-~--------  145 (245)
T 2ph3_A           77 VLGGLDTLVNNAGITRDTLLVRMKDEDW-EAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGIL-G--------  145 (245)
T ss_dssp             HHTCCCEEEECCCCCCCBCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH-C--------
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHH-HHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhcc-C--------
Confidence               78999999986542      12233 378999999955554    4555555 68999999976542 1        


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .++...|+.+|...+.+.+.+++++   +++++++||+.++++.... ...   ......... .+.
T Consensus       146 -------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~---~~~~~~~~~-~~~  207 (245)
T 2ph3_A          146 -------------NPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER-LPQ---EVKEAYLKQ-IPA  207 (245)
T ss_dssp             -------------CSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCH---HHHHHHHHT-CTT
T ss_pred             -------------CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh-cCH---HHHHHHHhc-CCC
Confidence                         1234679999999999999988765   8999999999999885322 111   111111111 111


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEeccc
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSAK  258 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~~  258 (327)
                           ..+++++|+|+++++++..+.   .+..|+++++.
T Consensus       208 -----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          208 -----GRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             -----CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             -----CCCcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence                 368999999999999987642   24567776553

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.93  E-value=5.4e-25  Score=185.83  Aligned_cols=208  Identities=15%  Similarity=0.179  Sum_probs=152.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|+||++++++|+++|++|++++| ++...... ..+.      .++.++.+|++|++++.++++     
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~~   78 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDI-LDEEGKAMAAELA------DAARYVHLDVTQPAQWKAAVDTAVTA   78 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHTG------GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHhh------cCceEEEecCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 43222221 1111      247889999999999888776     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHH----HHhcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKS----CLKSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||....      +.+++ ...+++|+.++.+++++    +++.+ .++||++||...+..          
T Consensus        79 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----------  146 (260)
T 1nff_A           79 FGGLHVLVNNAGILNIGTIEDYALTEW-QRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAG----------  146 (260)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC----------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCC----------
Confidence              79999999996542      12233 37899999999655554    44555 689999999876531          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .++...|+.+|...+.+.+.++.+   .|++++++||+.++++...  ....      ...  ..+  
T Consensus       147 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~------~~~--~~~--  202 (260)
T 1nff_A          147 ------------TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--WVPE------DIF--QTA--  202 (260)
T ss_dssp             ------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--TSCT------TCS--CCS--
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--cchh------hHH--hCc--
Confidence                        123457999999999999998876   4899999999999998632  1100      000  111  


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                         ...+.+++|+|+++++++....   .+..|++.+.
T Consensus       203 ---~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG  237 (260)
T 1nff_A          203 ---LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG  237 (260)
T ss_dssp             ---SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---cCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence               1368899999999999987542   2446777554

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.93  E-value=6.4e-25  Score=186.11  Aligned_cols=219  Identities=14%  Similarity=0.111  Sum_probs=155.3

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |...+++||||||+|+||.+++++|+++|++|++++| +...........     ..++.++.+|++|++++.++++   
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   81 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDL-PNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAK   81 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-TTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CcHhHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            3334678999999999999999999999999999999 443332221111     2478999999999999888776   


Q ss_pred             ----CCCEEEEccCCCCCC-----------CCchHHHHHHHHHhHHHHHHHHHHhc----------CCccEEEEecccee
Q 020334           78 ----GCAGVIHVAAPIDID-----------GKETEEVMTQRAVNGTIGILKSCLKS----------GTVKRFVYTSSGST  132 (327)
Q Consensus        78 ----~~d~vih~a~~~~~~-----------~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~~~~~v~~SS~~v  132 (327)
                          ++|+|||+||.....           ..+.....+++|+.++.++++++.+.          + .++||++||...
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~  160 (265)
T 2o23_A           82 GKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINTASVAA  160 (265)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHH
T ss_pred             HHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCC-CcEEEEeCChhh
Confidence                799999999875421           11222378999999999999988754          3 579999999876


Q ss_pred             eeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHH
Q 020334          133 VYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRS  209 (327)
Q Consensus       133 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~  209 (327)
                      +..                      .++...|+.+|...+.+++.++.++   ++++++++||.+.++..... +...  
T Consensus       161 ~~~----------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~--  215 (265)
T 2o23_A          161 FEG----------------------QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL-PEKV--  215 (265)
T ss_dssp             HHC----------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------
T ss_pred             cCC----------------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc-CHHH--
Confidence            531                      1235679999999999999888764   89999999999988753321 1100  


Q ss_pred             HHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 020334          210 TLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKG-RYICSSA  257 (327)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~  257 (327)
                       ...... ..+.    ...+++++|+|++++++++.....| .+++.+.
T Consensus       216 -~~~~~~-~~~~----~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdgG  258 (265)
T 2o23_A          216 -CNFLAS-QVPF----PSRLGDPAEYAHLVQAIIENPFLNGEVIRLDGA  258 (265)
T ss_dssp             --CHHHH-TCSS----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             -HHHHHH-cCCC----cCCCCCHHHHHHHHHHHhhcCccCceEEEECCC
Confidence             000000 0111    0257899999999999997655444 5666543

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.93  E-value=3.6e-25  Score=185.59  Aligned_cols=213  Identities=16%  Similarity=0.126  Sum_probs=155.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| +......+....     ..++.++.+|++|+++++++++       
T Consensus         9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (248)
T 3op4_A            9 GKVALVTGASRGIGKAIAELLAERGAKVIGTAT-SESGAQAISDYL-----GDNGKGMALNVTNPESIEAVLKAITDEFG   82 (248)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHh-----cccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999 433322222111     1357889999999998887775       


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|++|||||....      +.+++. ..+++|+.++.++++++.+    .+ ..+||++||...+..            
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~------------  148 (248)
T 3op4_A           83 GVDILVNNAGITRDNLLMRMKEEEWS-DIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMG------------  148 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCC------------
Confidence            78999999997542      223344 7899999999999888754    34 579999999766521            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                .++...|+.+|...+.+.+.++.++   |++++.++||.+..+..... ....  .......  .+.   
T Consensus       149 ----------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~--~~~~~~~--~p~---  210 (248)
T 3op4_A          149 ----------NAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL-NDEQ--RTATLAQ--VPA---  210 (248)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS-CHHH--HHHHHHT--CTT---
T ss_pred             ----------CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc-CHHH--HHHHHhc--CCC---
Confidence                      1335679999999999999988764   89999999999988764321 1111  1111111  111   


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 020334          225 LNISMVHIDDVARAHIFLLEYPDA---KGRYICSSA  257 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  257 (327)
                        ..+.+++|+|+++++++.....   +..+++++.
T Consensus       211 --~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG  244 (248)
T 3op4_A          211 --GRLGDPREIASAVAFLASPEAAYITGETLHVNGG  244 (248)
T ss_dssp             --CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCcCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence              2688999999999999875432   446677654

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.93  E-value=2.7e-25  Score=186.41  Aligned_cols=219  Identities=14%  Similarity=0.102  Sum_probs=159.8

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |...+|++|||||+|+||++++++|+++|++|++++| +......+ ..+...   ..++.++.+|++|++++.++++  
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   76 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTAT-SQASAEKFENSMKEK---GFKARGLVLNISDIESIQNFFAEI   76 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHH
Confidence            6666889999999999999999999999999999999 43332222 222221   2578999999999998887765  


Q ss_pred             -----CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCc
Q 020334           78 -----GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDM  142 (327)
Q Consensus        78 -----~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~  142 (327)
                           ++|+||||||....      +.+++ ...+++|+.++.++++++.+    .+ ..++|++||...+..       
T Consensus        77 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-------  147 (247)
T 3lyl_A           77 KAENLAIDILVNNAGITRDNLMMRMSEDEW-QSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSAG-------  147 (247)
T ss_dssp             HHTTCCCSEEEECCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHC-------
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccC-------
Confidence                 57999999997542      22233 37899999999998887654    33 569999999876531       


Q ss_pred             ccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcc
Q 020334          143 LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNRE  219 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (327)
                                     .++...|+.+|...+.+++.++.++   |+++++++||.+.++..... ...   ...... ...
T Consensus       148 ---------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~---~~~~~~-~~~  207 (247)
T 3lyl_A          148 ---------------NPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL-TDE---QKSFIA-TKI  207 (247)
T ss_dssp             ---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS-CHH---HHHHHH-TTS
T ss_pred             ---------------CCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc-cHH---HHHHHh-hcC
Confidence                           1335679999999999999988764   89999999999998864432 111   111111 111


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      +.     ..+.+++|+|+++++++....   .+..++++++
T Consensus       208 ~~-----~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG  243 (247)
T 3lyl_A          208 PS-----GQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGG  243 (247)
T ss_dssp             TT-----CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCC
Confidence            11     268999999999999987543   2446777554

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.93  E-value=8.6e-25  Score=186.86  Aligned_cols=224  Identities=17%  Similarity=0.193  Sum_probs=156.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC--------cchhhhhhC-CCCCCCCeEEEeCCCCChhHHHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH--------KKDLSFLTN-LPGASERLQIFNADLNDPESFDAA   75 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~   75 (327)
                      +|++|||||+|+||.+++++|+++|++|++++|+....        ...+..... ......++.++.+|++|++++.++
T Consensus        10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   89 (281)
T 3s55_A           10 GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESF   89 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            57899999999999999999999999999999942210        111111100 001135789999999999988877


Q ss_pred             hc-------CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCC
Q 020334           76 IA-------GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGK  138 (327)
Q Consensus        76 ~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~  138 (327)
                      ++       ++|++||+||....      +.+++. ..+++|+.++.++++++.    +.+ ..+||++||...+..   
T Consensus        90 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~---  164 (281)
T 3s55_A           90 VAEAEDTLGGIDIAITNAGISTIALLPEVESAQWD-EVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGHSA---  164 (281)
T ss_dssp             HHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSC---
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcCC---
Confidence            65       78999999997542      223344 789999999999998854    344 579999999876521   


Q ss_pred             CCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC------C----c
Q 020334          139 DVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKF------A----G  205 (327)
Q Consensus       139 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~------~----~  205 (327)
                                         .++...|+.+|...+.+.+.++.++   |++++.++||.+++|......      +    .
T Consensus       165 -------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  225 (281)
T 3s55_A          165 -------------------NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKP  225 (281)
T ss_dssp             -------------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------C
T ss_pred             -------------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhcccccccccc
Confidence                               1335679999999999999998864   899999999999998643210      0    0


Q ss_pred             hHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 020334          206 SVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDA---KGRYICSSA  257 (327)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  257 (327)
                      .............     .....+++++|+|+++++++.....   +..+++++.
T Consensus       226 ~~~~~~~~~~~~~-----~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG  275 (281)
T 3s55_A          226 TLKDVESVFASLH-----LQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAG  275 (281)
T ss_dssp             CHHHHHHHHHHHC-----SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             chhHHHHHHHhhh-----ccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence            0000000000000     0013789999999999999986432   446777554

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.93  E-value=9.5e-25  Score=183.32  Aligned_cols=214  Identities=15%  Similarity=0.101  Sum_probs=150.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---CCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---GCA   80 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d   80 (327)
                      ..++||||||+|+||+++++.|+++|++|++++| +......+....     ..++.++.+|++|.+++.++++   ++|
T Consensus        13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~id   86 (249)
T 3f9i_A           13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGS-NEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLISKTSNLD   86 (249)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence            4689999999999999999999999999999999 433322222111     1478899999999999988886   689


Q ss_pred             EEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           81 GVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        81 ~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                      ++||+||...      ...+++. ..+++|+.++.++++++..    .+ ..+||++||...+..               
T Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~---------------  149 (249)
T 3f9i_A           87 ILVCNAGITSDTLAIRMKDQDFD-KVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIAG---------------  149 (249)
T ss_dssp             EEEECCC-------------CHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--C---------------
T ss_pred             EEEECCCCCCCCccccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhccC---------------
Confidence            9999998654      2234444 8899999999998887643    33 579999999877631               


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCC
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNI  227 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (327)
                             .++...|+.+|...+.+++.++.+   .|+++++++||.+.++.............   ...  .+.     .
T Consensus       150 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~---~~~--~~~-----~  212 (249)
T 3f9i_A          150 -------NPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAI---VQK--IPL-----G  212 (249)
T ss_dssp             -------CSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHH---HHH--CTT-----C
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHH---Hhc--CCC-----C
Confidence                   133567999999999999998876   38999999999999886433211111111   111  111     2


Q ss_pred             CeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          228 SMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       228 ~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .+.+++|+|+++++++....   .+..+++++.
T Consensus       213 ~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG  245 (249)
T 3f9i_A          213 TYGIPEDVAYAVAFLASNNASYITGQTLHVNGG  245 (249)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence            68999999999999998643   2456777654

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.93  E-value=3.6e-25  Score=186.49  Aligned_cols=217  Identities=17%  Similarity=0.146  Sum_probs=151.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCe-EEEeCCCCChhHHHHHh------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERL-QIFNADLNDPESFDAAI------   76 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~-~~~~~D~~d~~~~~~~~------   76 (327)
                      ++++|||||+|+||++++++|+++|++|++++| ++...... ..+      ..++ .++.+|++|++++.+++      
T Consensus        11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (254)
T 2wsb_A           11 GACAAVTGAGSGIGLEICRAFAASGARLILIDR-EAAALDRAAQEL------GAAVAARIVADVTDAEAMTAAAAEAEAV   83 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHH------GGGEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHh------cccceeEEEEecCCHHHHHHHHHHHHhh
Confidence            578999999999999999999999999999999 43222211 111      1355 88999999999888776      


Q ss_pred             cCCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           77 AGCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        77 ~~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      .++|+|||+||.....     ..+...+.+++|+.++.++++++    ++.+ .++||++||...+...           
T Consensus        84 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----------  151 (254)
T 2wsb_A           84 APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVN-----------  151 (254)
T ss_dssp             SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----------
T ss_pred             CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCC-----------
Confidence            4789999999865421     11222378899999977776655    4444 6899999998765311           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                      +         ..+.+.|+.+|...|.+++.++.++   +++++++||+.++++........  .......... .+.   
T Consensus       152 ~---------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~-~~~---  216 (254)
T 2wsb_A          152 R---------PQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRER--PELFETWLDM-TPM---  216 (254)
T ss_dssp             S---------SSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTC--HHHHHHHHHT-STT---
T ss_pred             C---------CCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccC--hHHHHHHHhc-CCC---
Confidence            0         1224689999999999999988775   89999999999999853210000  0111111111 111   


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          225 LNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                        ..+++++|+|+++++++....   .+..++++++
T Consensus       217 --~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  250 (254)
T 2wsb_A          217 --GRCGEPSEIAAAALFLASPAASYVTGAILAVDGG  250 (254)
T ss_dssp             --SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence              368999999999999987532   2446677654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.93  E-value=1.9e-25  Score=188.22  Aligned_cols=217  Identities=14%  Similarity=0.096  Sum_probs=157.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|+||++++++|+++|++|++++| +...... ...+...   ..++.++.+|++|++++.++++     
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   86 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDL-KSEGAEAVAAAIRQA---GGKAIGLECNVTDEQHREAVIKAALDQ   86 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEES-SHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 4332222 2222221   3578999999999998887765     


Q ss_pred             --CCCEEEEccCCCCC-----CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 --GCAGVIHVAAPIDI-----DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 --~~d~vih~a~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                        ++|++||+||....     +.+++. ..+++|+.++.++++++.    +.+ ..+||++||...+..           
T Consensus        87 ~g~id~lv~nAg~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-----------  153 (256)
T 3gaf_A           87 FGKITVLVNNAGGGGPKPFDMPMSDFE-WAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGENT-----------  153 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTCC-----------
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcCC-----------
Confidence              78999999987542     123343 789999999999998874    333 579999999876521           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .++...|+.+|...+.+.+.++.++   |++++.++||.+.++........   ........ ..+.  
T Consensus       154 -----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~-~~p~--  216 (256)
T 3gaf_A          154 -----------NVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTP---EIERAMLK-HTPL--  216 (256)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCH---HHHHHHHT-TCTT--
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCH---HHHHHHHh-cCCC--
Confidence                       1335679999999999999998774   89999999999988742211111   11111111 1122  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                         ..+.+++|+|+++++++....   .+..++++|.
T Consensus       217 ---~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG  250 (256)
T 3gaf_A          217 ---GRLGEAQDIANAALFLCSPAAAWISGQVLTVSGG  250 (256)
T ss_dssp             ---SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCCCHHHHHHHHHHHcCCcccCccCCEEEECCC
Confidence               268899999999999997533   3456777554

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.93  E-value=3.5e-25  Score=187.13  Aligned_cols=220  Identities=16%  Similarity=0.094  Sum_probs=155.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||++++++|+++|++|++++| +++.... ...+...   ..++.++.+|++|++++.++++      
T Consensus        14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSR-KQENVDRTVATLQGE---GLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999 4322221 1222211   2468889999999998877765      


Q ss_pred             -CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 -GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 -~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                       ++|++||+||....       ..+++. ..+++|+.++.++++++.    +.+ .++||++||...+..          
T Consensus        90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~-~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----------  157 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFGNIIDATEEVWD-KILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHP----------  157 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSC----------
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcCC----------
Confidence             79999999986431       122333 789999999988888765    334 679999999877631          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .++...|+.+|...+.+++.++.++   |+++++++|+.+.++.........  ....... ...+  
T Consensus       158 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~-~~~~--  220 (260)
T 2zat_A          158 ------------FPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDK--ARKEYMK-ESLR--  220 (260)
T ss_dssp             ------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSH--HHHHHHH-HHHT--
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccCh--HHHHHHH-hcCC--
Confidence                        1335679999999999999998765   899999999999887522100000  0000000 0011  


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEec-cccC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSS-AKLT  260 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~-~~~s  260 (327)
                         ...+++++|+|+++++++....   .+.++++++ ...|
T Consensus       221 ---~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          221 ---IRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             ---CSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             ---CCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence               1368999999999999987643   344777754 4443

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.93  E-value=8.3e-25  Score=185.14  Aligned_cols=205  Identities=21%  Similarity=0.218  Sum_probs=151.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++|++|||||+|+||.+++++|+++|++|++++| +.+   .+..+.     ..++.++.+|++|.+++.++++      
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~---~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLAR-RVE---RLKALN-----LPNTLCAQVDVTDKYTFDTAITRAEKIY   85 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEES-CHH---HHHTTC-----CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CHH---HHHHhh-----cCCceEEEecCCCHHHHHHHHHHHHHHC
Confidence            4678999999999999999999999999999999 332   222221     2478899999999998887765      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++|||||....      ..+++. ..+++|+.++.++++++.    +.+ .++||++||...+..           
T Consensus        86 g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~-----------  152 (266)
T 3p19_A           86 GPADAIVNNAGMMLLGQIDTQEANEWQ-RMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKT-----------  152 (266)
T ss_dssp             CSEEEEEECCCCCCCCCTTTSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC-----------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCC-----------
Confidence             68999999997542      122333 779999999999766654    444 679999999876521           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .++...|+.+|...+.+.+.++.++   |++++.++||.+.++.................   ..+.  
T Consensus       153 -----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~---~~~~--  216 (266)
T 3p19_A          153 -----------FPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAW---RVDM--  216 (266)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHH---HHHT--
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhh---cccc--
Confidence                       1335679999999999999988774   89999999999999864332221111111110   0111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCCCC
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPDAK  249 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~~~  249 (327)
                         ..+++++|+|++++++++.+...
T Consensus       217 ---~r~~~pedvA~av~~l~~~~~~~  239 (266)
T 3p19_A          217 ---GGVLAADDVARAVLFAYQQPQNV  239 (266)
T ss_dssp             ---TCCBCHHHHHHHHHHHHHSCTTE
T ss_pred             ---cCCCCHHHHHHHHHHHHcCCCCc
Confidence               25889999999999999987653

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.93  E-value=6.1e-25  Score=185.10  Aligned_cols=218  Identities=14%  Similarity=0.113  Sum_probs=154.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| ++. ......+...   ..++.++.+|++|++++.++++       
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r-~~~-~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGF-GDP-APALAEIARH---GVKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECS-SCC-HHHHHHHHTT---SCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-Cch-HHHHHHHHhc---CCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999999999 433 2222333221   2468889999999999888776       


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|++||+||....      ..+++ ...+++|+.++..+.+++    ++.+ .++||++||...+..            
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~------------  144 (255)
T 2q2v_A           79 GVDILVNNAGIQHVAPVEQFPLESW-DKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVG------------  144 (255)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSC------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccC------------
Confidence            79999999986542      12233 378999999766665554    5555 689999999876531            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHH---H----HHHhCC
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRST---L----AMVLGN  217 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~---~----~~~~~~  217 (327)
                                .++...|+.+|...+.+.+.++.++   |+++++++|+.+++|..... .......   .    ......
T Consensus       145 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~  213 (255)
T 2q2v_A          145 ----------STGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQ-IDDRAANGGDPLQAQHDLLAE  213 (255)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHH-HHHHHHHTCCHHHHHHHHHTT
T ss_pred             ----------CCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhh-cccccccccchHHHHHHHHhc
Confidence                      1234579999999999999998874   79999999999998742110 0000000   0    111011


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ..+     ...+++++|+|+++++++....   .+..|++.+.
T Consensus       214 ~~p-----~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  251 (255)
T 2q2v_A          214 KQP-----SLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGG  251 (255)
T ss_dssp             TCT-----TCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cCC-----CCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCC
Confidence            111     1368999999999999987643   2446777554

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.93  E-value=2e-24  Score=185.49  Aligned_cols=225  Identities=16%  Similarity=0.085  Sum_probs=157.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---CCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---GCA   80 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d   80 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++| +......   .....  ..++.++.+|++|.+++.++++   ++|
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r-~~~~~~~---~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~iD   88 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVR-DTRKGEA---AARTM--AGQVEVRELDLQDLSSVRRFADGVSGAD   88 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHH---HHTTS--SSEEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEEC-CHHHHHH---HHHHh--cCCeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence            3578999999999999999999999999999999 4322222   11111  2578999999999999999887   579


Q ss_pred             EEEEccCCCC----CCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCC-CCCChhHhh
Q 020334           81 GVIHVAAPID----IDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDET-FWSDEDYIR  155 (327)
Q Consensus        81 ~vih~a~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~-~~~~~~~~~  155 (327)
                      ++||+||...    .+.+.+. ..+++|+.++.++++++.+.. .++||++||...+... .......++ .+       
T Consensus        89 ~lv~nAg~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~-~~~~~~~~~~~~-------  158 (291)
T 3rd5_A           89 VLINNAGIMAVPYALTVDGFE-SQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGR-INLEDLNWRSRR-------  158 (291)
T ss_dssp             EEEECCCCCSCCCCBCTTSCB-HHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCC-CCSSCTTCSSSC-------
T ss_pred             EEEECCcCCCCcccCCHHHHH-HHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCC-CCcccccccccC-------
Confidence            9999999754    2234454 889999999999999999887 6799999998876422 111111111 11       


Q ss_pred             hcCCCchhhHhhhHHHHHHHHHHHHHc---C--CcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCee
Q 020334          156 KLDIWGKSYVLTKTLTERAALEFAEEH---G--LDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMV  230 (327)
Q Consensus       156 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  230 (327)
                        ..+...|+.||...+.+.+.+++++   +  ++++.++||.|.++.......... ...   ...  .    ..+-..
T Consensus       159 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~-~~~---~~~--~----~~~~~~  226 (291)
T 3rd5_A          159 --YSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLG-DAL---MSA--A----TRVVAT  226 (291)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------------CH
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHH-HHH---HHH--H----HHHHhC
Confidence              2345689999999999999988765   4  999999999998875432111110 000   000  0    011234


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEE-Eec
Q 020334          231 HIDDVARAHIFLLEYPDAKGRYI-CSS  256 (327)
Q Consensus       231 ~v~D~a~~~~~~~~~~~~~~~y~-~~~  256 (327)
                      .++|+|+++++++..+...|.|. +.+
T Consensus       227 ~~~~~A~~~~~l~~~~~~~G~~~~vdg  253 (291)
T 3rd5_A          227 DADFGARQTLYAASQDLPGDSFVGPRF  253 (291)
T ss_dssp             HHHHHHHHHHHHHHSCCCTTCEEEETT
T ss_pred             CHHHHHHHHHHHHcCCCCCCceeCCcc
Confidence            59999999999998866666554 543

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.93  E-value=1.5e-24  Score=184.50  Aligned_cols=220  Identities=13%  Similarity=0.094  Sum_probs=151.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHh------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAI------   76 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~------   76 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++| ++..... ...+...   ..++.++.+|++|++++.+++      
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSR-NEKELDECLEIWREK---GLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 4322221 1222211   246889999999999888766      


Q ss_pred             --cCCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCccc
Q 020334           77 --AGCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        77 --~~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        .++|++||+||....      ..+++. ..+++|+.++.++++++.    +.+ .++||++||...+..         
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~---------  164 (273)
T 1ae1_A           96 FDGKLNILVNNAGVVIHKEAKDFTEKDYN-IIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSA---------  164 (273)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSC---------
T ss_pred             cCCCCcEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCC---------
Confidence              468999999986532      122333 778999999999988774    334 579999999876631         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCch--HHHHHHHHhCCcc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGS--VRSTLAMVLGNRE  219 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~--~~~~~~~~~~~~~  219 (327)
                                   .++...|+.+|...+.+.+.++.++   |+++++++||.+++|.........  .......... ..
T Consensus       165 -------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~  230 (273)
T 1ae1_A          165 -------------LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIV-KT  230 (273)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHH-HS
T ss_pred             -------------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHh-cC
Confidence                         1235679999999999999988765   899999999999998643211100  0011111110 01


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      +.     ..+.+++|+|+++++++....   .+.++++.|.
T Consensus       231 p~-----~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  266 (273)
T 1ae1_A          231 PM-----GRAGKPQEVSALIAFLCFPAASYITGQIIWADGG  266 (273)
T ss_dssp             TT-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCCcCHHHHHHHHHHHhCccccCcCCCEEEECCC
Confidence            11     258899999999999987532   2446667554

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.93  E-value=2.5e-24  Score=180.74  Aligned_cols=218  Identities=14%  Similarity=0.107  Sum_probs=145.7

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |...+|++|||||+|+||.+++++|+++|++|++++| ++...            ..++.++.+|++|++++.++++   
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r-~~~~~------------~~~~~~~~~D~~d~~~~~~~~~~~~   69 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQ-AFTQE------------QYPFATEVMDVADAAQVAQVCQRLL   69 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CCCSS------------CCSSEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-chhhh------------cCCceEEEcCCCCHHHHHHHHHHHH
Confidence            4445689999999999999999999999999999999 43210            0137889999999999888775   


Q ss_pred             ----CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 ----GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ----~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                          ++|++||+||....      +.+++. ..+++|+.++.++++++    ++.+ .++||++||...+..        
T Consensus        70 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~--------  139 (250)
T 2fwm_X           70 AETERLDALVNAAGILRMGATDQLSKEDWQ-QTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTP--------  139 (250)
T ss_dssp             HHCSCCCEEEECCCCCCCCCTTTSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC--------
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHH-HHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCC--------
Confidence                68999999986542      122343 78999999999998887    3444 579999999876521        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHH-HHhCCcc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLA-MVLGNRE  219 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~-~~~~~~~  219 (327)
                                    .++...|+.+|...+.+.+.++.++   |+++++++|+.++++........  ..... .......
T Consensus       140 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~  203 (250)
T 2fwm_X          140 --------------RIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVS--DDAEEQRIRGFGE  203 (250)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------
T ss_pred             --------------CCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccC--hhHHHHHHhhhhh
Confidence                          1335679999999999999988764   89999999999999863321000  00000 0000000


Q ss_pred             ccc-cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          220 EYS-ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       220 ~~~-~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .+. ......+.+++|+|+++++++....   .+..+++.+.
T Consensus       204 ~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  245 (250)
T 2fwm_X          204 QFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVDGG  245 (250)
T ss_dssp             ------------CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccccCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            000 0001257899999999999997642   2345666554

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.93  E-value=2.2e-25  Score=188.91  Aligned_cols=226  Identities=16%  Similarity=0.142  Sum_probs=157.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++|+||||||+|+||++++++|+++|++|++++|+..........+....  ..++.++.+|++|++++.++++      
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   90 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF--GVKTKAYQCDVSNTDIVTKTIQQIDADL   90 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc--CCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999994332222222221100  2468899999999998887664      


Q ss_pred             -CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|+|||+||.....      .+.+ ...+++|+.++.++++++.+.    +..++||++||...+.....   .   .
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---~---~  163 (265)
T 1h5q_A           91 GPISGLIANAGVSVVKPATELTHEDF-AFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS---S---L  163 (265)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE---E---T
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHH-HHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc---c---c
Confidence             489999999875421      2233 377999999999999887653    22379999999876531100   0   0


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                      .+         ..+...|+.+|...+.+++.++.++   |++++++||+.++++..... ..   ......... .+.  
T Consensus       164 ~~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~---~~~~~~~~~-~~~--  227 (265)
T 1h5q_A          164 NG---------SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM-DK---KIRDHQASN-IPL--  227 (265)
T ss_dssp             TE---------ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-CH---HHHHHHHHT-CTT--
T ss_pred             cc---------cccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc-ch---hHHHHHHhc-Ccc--
Confidence            00         1345689999999999999998764   89999999999999864321 11   111111111 111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                         ..+++++|+|+++++++....   .+..|+++++
T Consensus       228 ---~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  261 (265)
T 1h5q_A          228 ---NRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG  261 (265)
T ss_dssp             ---SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             ---cCCCCHHHHHHHHHhhccCchhcCcCcEEEecCC
Confidence               258899999999999987642   3457777654

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.93  E-value=2e-25  Score=190.24  Aligned_cols=219  Identities=18%  Similarity=0.135  Sum_probs=154.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||++++++|+++|++|++++| ++..... ...+...   ..++.++.+|++|++++.++++      
T Consensus        22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   97 (277)
T 2rhc_B           22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCAR-GEEGLRTTLKELREA---GVEADGRTCDVRSVPEIEALVAAVVERY   97 (277)
T ss_dssp             SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999 4322221 1222211   2468899999999998887765      


Q ss_pred             -CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHhc------CCccEEEEeccceeeeecCCCCCccc
Q 020334           78 -GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLKS------GTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 -~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                       ++|+|||+||.....      .+++ ...+++|+.++.++++++.+.      + .++||++||...+..         
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~~---------  166 (277)
T 2rhc_B           98 GPVDVLVNNAGRPGGGATAELADELW-LDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQG---------  166 (277)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTSC---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccccC---------
Confidence             689999999865421      1233 378999999999999987654      4 679999999765421         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchH-------HHHHHHH
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSV-------RSTLAMV  214 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~-------~~~~~~~  214 (327)
                                   .++...|+.+|...+.+.+.++.++   |+++++++||.+.++..........       .......
T Consensus       167 -------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  233 (277)
T 2rhc_B          167 -------------VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRI  233 (277)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred             -------------CCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHH
Confidence                         1235679999999999999988764   7999999999999874211000000       0000100


Q ss_pred             hCCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          215 LGNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       215 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      . ...+     ...+++++|+|+++++++..+.   .+.++++.+.
T Consensus       234 ~-~~~p-----~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG  273 (277)
T 2rhc_B          234 T-ARVP-----IGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  273 (277)
T ss_dssp             H-HHST-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             H-hcCC-----CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence            0 0011     1368999999999999997642   3446777654

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.93  E-value=4.8e-25  Score=188.97  Aligned_cols=218  Identities=19%  Similarity=0.138  Sum_probs=156.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++| +...... ...+....  ..++.++.+|++|++++.++++     
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~  116 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAAR-SPRELSSVTAELGELG--AGNVIGVRLDVSDPGSCADAARTVVDA  116 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SGGGGHHHHHHHTTSS--SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhhC--CCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 4433322 23332221  1478999999999988877664     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||....      +.+++. ..+++|+.++.++++++.    +.+ ..+||++||...+..+         
T Consensus       117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~---------  185 (293)
T 3rih_A          117 FGALDVVCANAGIFPEARLDTMTPEQLS-EVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTG---------  185 (293)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHH-HHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBB---------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCC---------
Confidence              68999999997542      223334 789999999999998874    444 5799999997642101         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .++...|+.+|...+.+.+.++.++   |+++++++||.+++|......    ......... ..+..
T Consensus       186 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~~~-~~p~~  248 (293)
T 3rih_A          186 ------------YPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG----EEYISGMAR-SIPMG  248 (293)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC----HHHHHHHHT-TSTTS
T ss_pred             ------------CCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc----HHHHHHHHh-cCCCC
Confidence                        1335679999999999999988774   899999999999998532211    111111111 11222


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                           .+..++|+|+++++++....   .+.++++.|.
T Consensus       249 -----r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG  281 (293)
T 3rih_A          249 -----MLGSPVDIGHLAAFLATDEAGYITGQAIVVDGG  281 (293)
T ss_dssp             -----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence                 57789999999999987542   2446677554

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.93  E-value=7e-25  Score=185.29  Aligned_cols=223  Identities=14%  Similarity=0.107  Sum_probs=152.4

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      ..+|++|||||+|+||++++++|+++|++|++++| ++...... ..+.... ...++.++.+|++|++++.++++    
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSR-NREKLEAAASRIASLV-SGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHHS-TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhcC-CCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999 43222211 1121100 01268899999999999888775    


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||....      ..+++. ..+++|+.++..+++++.    +.+ .++||++||...+..          
T Consensus        83 ~~gid~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----------  150 (260)
T 2z1n_A           83 LGGADILVYSTGGPRPGRFMELGVEDWD-ESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRP----------  150 (260)
T ss_dssp             TTCCSEEEECCCCCCCBCGGGCCHHHHH-HHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC----------
T ss_pred             hcCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCC----------
Confidence              59999999986432      222343 789999999866666554    444 689999999876631          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc-----hHH-HH-HHHHh
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAG-----SVR-ST-LAMVL  215 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~-----~~~-~~-~~~~~  215 (327)
                                  .++...|+.+|...+.+.+.++.++   |+++++++||.+++|........     ... .. .....
T Consensus       151 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T 2z1n_A          151 ------------WQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMA  218 (260)
T ss_dssp             ------------CTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC----------------------
T ss_pred             ------------CCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHH
Confidence                        1235679999999999999988765   89999999999999864311000     000 00 00000


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                       ...+.     ..+.+++|+|+++++++....   .+..+++++.
T Consensus       219 -~~~p~-----~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG  257 (260)
T 2z1n_A          219 -SRIPM-----GRVGKPEELASVVAFLASEKASFITGAVIPVDGG  257 (260)
T ss_dssp             --CCTT-----SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -hcCCC-----CCccCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence             01111     258899999999999997532   2345666554

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.93  E-value=1.7e-24  Score=183.47  Aligned_cols=218  Identities=14%  Similarity=0.060  Sum_probs=155.9

Q ss_pred             CCeEEEeCCc--chhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGT--GFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +|++|||||+  |+||.+++++|+++|++|++++| ++.....+..+...   .+...++.+|++|++++.++++     
T Consensus         9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQ-NDKLKGRVEEFAAQ---LGSDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEES-STTTHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcC-cHHHHHHHHHHHHh---cCCcEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999999  99999999999999999999999 43322333333221   1234788999999998887765     


Q ss_pred             --CCCEEEEccCCCC-----------CCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcc
Q 020334           78 --GCAGVIHVAAPID-----------IDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 --~~d~vih~a~~~~-----------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                        ++|++||+||...           ...+++ ...+++|+.++.++++++.+.- ...+||++||...+..        
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~--------  155 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGF-KIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA--------  155 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHH-HHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB--------
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHH-HHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC--------
Confidence              6899999999654           122233 3789999999999999998752 1359999999765521        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    .++...|+.+|...+.+.+.++.++   |+++++++||.+++|..... .. ........... .+
T Consensus       156 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~-~~~~~~~~~~~-~p  218 (265)
T 1qsg_A          156 --------------IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KD-FRKMLAHCEAV-TP  218 (265)
T ss_dssp             --------------CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-TT-HHHHHHHHHHH-ST
T ss_pred             --------------CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc-cc-cHHHHHHHHhc-CC
Confidence                          1224579999999999999998775   89999999999999864321 11 11111111111 11


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      +     ..+.+++|+|+++++++....   .+..+++.+.
T Consensus       219 ~-----~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  253 (265)
T 1qsg_A          219 I-----RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG  253 (265)
T ss_dssp             T-----SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             C-----CCCCCHHHHHHHHHHHhCchhcCccCCEEEECCC
Confidence            1     157899999999999987533   2446777554

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.93  E-value=2e-24  Score=182.81  Aligned_cols=218  Identities=17%  Similarity=0.083  Sum_probs=153.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|++|||||+|+||++++++|+++|++|++++| ++.......  ...   ..++.++.+|++|++++.++++       
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~D~~d~~~v~~~~~~~~~~~g   85 (263)
T 3ak4_A           12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADL-DVMAAQAVV--AGL---ENGGFAVEVDVTKRASVDAAMQKAIDALG   85 (263)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HTC---TTCCEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHH---hcCCeEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999 432222111  111   1267889999999999888776       


Q ss_pred             CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|+|||+||.....      .+++. ..+++|+.++.++++++.+.    +..++||++||...+..            
T Consensus        86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------  152 (263)
T 3ak4_A           86 GFDLLCANAGVSTMRPAVDITDEEWD-FNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG------------  152 (263)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC------------
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC------------
Confidence            799999999965421      12333 78999999999998877653    21479999999765421            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC----c---hHHHHHHHHhCC
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFA----G---SVRSTLAMVLGN  217 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~----~---~~~~~~~~~~~~  217 (327)
                                .++...|+.+|...+.+++.++.++   |++++++||+.+++|.......    .   ........... 
T Consensus       153 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-  221 (263)
T 3ak4_A          153 ----------APLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVS-  221 (263)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHH-
T ss_pred             ----------CCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHh-
Confidence                      1234679999999999999988765   8999999999999874211000    0   00001111110 


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ..+     ...+++++|+|+++++++....   .+..+++++.
T Consensus       222 ~~p-----~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  259 (263)
T 3ak4_A          222 LTP-----LGRIEEPEDVADVVVFLASDAARFMTGQGINVTGG  259 (263)
T ss_dssp             TCT-----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             cCC-----CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcC
Confidence            011     1368999999999999997642   3446777554

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.93  E-value=5.7e-25  Score=187.25  Aligned_cols=221  Identities=14%  Similarity=0.123  Sum_probs=155.8

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |...+|++|||||+|+||++++++|+++|++|++++| +...........     ..++.++.+|++|+++++++++   
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~   96 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADV-NEDAAVRVANEI-----GSKAFGVRVDVSSAKDAESMVEKTT   96 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHH
Confidence            3344688999999999999999999999999999999 432222221111     2478899999999998887765   


Q ss_pred             ----CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 ----GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ----~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                          ++|++||+||....      +.+.+. ..+++|+.++..+++++.+    .+ ..+||++||...+..        
T Consensus        97 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--------  166 (277)
T 4dqx_A           97 AKWGRVDVLVNNAGFGTTGNVVTIPEETWD-RIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATSA--------  166 (277)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTSCHHHHH-HHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTSC--------
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCcC--------
Confidence                78999999996432      122333 7789999999888887743    33 569999999876521        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC--CCchHHHHHHHHhCCc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPK--FAGSVRSTLAMVLGNR  218 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~~~~~~~~  218 (327)
                                    .++...|+.+|...+.+.+.++.++   |++++.++||.+.+|.....  ............. ..
T Consensus       167 --------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~  231 (277)
T 4dqx_A          167 --------------IADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFN-AR  231 (277)
T ss_dssp             --------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHH-TT
T ss_pred             --------------CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHH-hc
Confidence                          1335689999999999999998775   89999999999988741100  0000111111111 11


Q ss_pred             cccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          219 EEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       219 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .+.     ..+.+++|+|+++++++....   .+..+++.|.
T Consensus       232 ~~~-----~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  268 (277)
T 4dqx_A          232 AVM-----DRMGTAEEIAEAMLFLASDRSRFATGSILTVDGG  268 (277)
T ss_dssp             STT-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             Ccc-----cCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCc
Confidence            111     268899999999999997643   3446677554

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.93  E-value=8.5e-25  Score=184.82  Aligned_cols=219  Identities=15%  Similarity=0.079  Sum_probs=156.5

Q ss_pred             CCCeEEEeCCc--chhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            4 QKGKVCVTGGT--GFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         4 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      .+|++|||||+  |+||++++++|+++|++|++++| ++........+...   .+++.++.+|++|++++.++++    
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQ-AERLRPEAEKLAEA---LGGALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEES-CGGGHHHHHHHHHH---TTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHh---cCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            35789999999  99999999999999999999999 43322233333221   1247889999999998887765    


Q ss_pred             ---CCCEEEEccCCCCC----------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcc
Q 020334           78 ---GCAGVIHVAAPIDI----------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ---~~d~vih~a~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                         ++|+|||+||....          +.+++ ...+++|+.++.++++++.+.- +..+||++||...+..        
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~--------  153 (261)
T 2wyu_A           83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDW-LLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV--------  153 (261)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHH-HHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB--------
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHH-HHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC--------
Confidence               68999999986431          22233 3789999999999999998752 1259999999765421        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    .++...|+.+|...+.+.+.++.++   |+++++++||.+++|..... .. ........... .+
T Consensus       154 --------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~-~~~~~~~~~~~-~p  216 (261)
T 2wyu_A          154 --------------VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI-PG-FTKMYDRVAQT-AP  216 (261)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGC-TT-HHHHHHHHHHH-ST
T ss_pred             --------------CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhc-cc-cHHHHHHHHhc-CC
Confidence                          1234579999999999999998775   89999999999999864321 11 11111111111 11


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .     ..+.+++|+|+++++++....   .+..+++.+.
T Consensus       217 ~-----~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  251 (261)
T 2wyu_A          217 L-----RRNITQEEVGNLGLFLLSPLASGITGEVVYVDAG  251 (261)
T ss_dssp             T-----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C-----CCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence            1     157899999999999987532   2446777544

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.93  E-value=1.6e-24  Score=182.72  Aligned_cols=219  Identities=14%  Similarity=0.050  Sum_probs=153.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| +.+..... ..+..   ...++.++.+|++|++++.++++      
T Consensus         6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGR-TKEKLEEAKLEIEQ---FPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHCC---STTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            688999999999999999999999999999999 43332222 22222   13578999999999998887765      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++|||||....      +.+++. ..+++|+.++..+++++.+    .+...++|++||...+..           
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  149 (257)
T 3imf_A           82 GRIDILINNAAGNFICPAEDLSVNGWN-SVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA-----------  149 (257)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC-----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC-----------
Confidence             68999999986432      223344 7899999999999888732    222579999999876521           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE----HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                 .+....|+.+|...+.+.+.++.+    .|++++.++||.+.++........ ......... ...+. 
T Consensus       150 -----------~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~-~~~~~~~~~-~~~p~-  215 (257)
T 3imf_A          150 -----------GPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWI-SEEMAKRTI-QSVPL-  215 (257)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC--------CCSHHHH-TTSTT-
T ss_pred             -----------CCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhccc-CHHHHHHHH-hcCCC-
Confidence                       123457999999999988887754    489999999999998854321100 000001111 11111 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                          ..+..++|+|+++++++....   .+..++++|.
T Consensus       216 ----~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  249 (257)
T 3imf_A          216 ----GRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGG  249 (257)
T ss_dssp             ----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----CCCcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence                268899999999999997643   3446677544

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.93  E-value=1.3e-24  Score=183.07  Aligned_cols=218  Identities=12%  Similarity=0.053  Sum_probs=156.4

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCe-EEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh-hHHHHHhc-
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYF-VTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP-ESFDAAIA-   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~-   77 (327)
                      |...+|+++||||+|+||.+++++|+++|++ |++++| +... .....+..... ..++.++.+|++|+ +++.++++ 
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r-~~~~-~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   77 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR-VENP-TALAELKAINP-KVNITFHTYDVTVPVAESKKLLKK   77 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES-SCCH-HHHHHHHHHCT-TSEEEEEECCTTSCHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEec-CchH-HHHHHHHHhCC-CceEEEEEEecCCChHHHHHHHHH
Confidence            6656789999999999999999999999997 999999 4321 22222221111 24688999999998 77776654 


Q ss_pred             ------CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcC------CccEEEEeccceeeeecCCCCCcccC
Q 020334           78 ------GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG------TVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 ------~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~------~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                            ++|+|||+||...  .+.+. ..+++|+.++.++++++.+.-      ...+||++||...+..          
T Consensus        78 ~~~~~g~id~lv~~Ag~~~--~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------  144 (254)
T 1sby_A           78 IFDQLKTVDILINGAGILD--DHQIE-RTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA----------  144 (254)
T ss_dssp             HHHHHSCCCEEEECCCCCC--TTCHH-HHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC----------
T ss_pred             HHHhcCCCCEEEECCccCC--HHHHh-hhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC----------
Confidence                  7899999999753  34555 899999999999999876431      1358999999876531          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchH---HHHHHHHhCCcc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSV---RSTLAMVLGNRE  219 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~---~~~~~~~~~~~~  219 (327)
                                  .++...|+.+|...+.+++.++.+   .|+++++++||.+.++..... ....   ...... ..   
T Consensus       145 ------------~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~-~~---  207 (254)
T 1sby_A          145 ------------IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTF-NSWLDVEPRVAEL-LL---  207 (254)
T ss_dssp             ------------CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSC-CCGGGSCTTHHHH-HT---
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcccccc-chhhhhhHHHHHH-Hh---
Confidence                        123457999999999999998875   589999999999998843211 1000   000111 11   


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCCCCceEEEecc
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPDAKGRYICSSA  257 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~  257 (327)
                            ...+.+++|+|++++.+++....+..|++.++
T Consensus       208 ------~~~~~~~~dvA~~i~~~~~~~~~G~~~~v~gG  239 (254)
T 1sby_A          208 ------SHPTQTSEQCGQNFVKAIEANKNGAIWKLDLG  239 (254)
T ss_dssp             ------TSCCEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred             ------cCCCCCHHHHHHHHHHHHHcCCCCCEEEEeCC
Confidence                  12456999999999999976555567777654

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.93  E-value=3.1e-25  Score=186.50  Aligned_cols=216  Identities=15%  Similarity=0.161  Sum_probs=151.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++||||||+|+||++++++|+++|++|++++| ++...... ..+..    ..++.++.+|++|++++.++++      
T Consensus         6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (251)
T 1zk4_A            6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGR-HSDVGEKAAKSVGT----PDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHCC----TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHhhc----cCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999 43222221 11211    1478999999999998887765      


Q ss_pred             -CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHH----HhcCCc-cEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSC----LKSGTV-KRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~-~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|+|||+||.....     ..+.....+++|+.++..+.+.+    ++.+ . ++||++||...+..           
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~-----------  148 (251)
T 1zk4_A           81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFVG-----------  148 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTSC-----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhccC-----------
Confidence             489999999865321     11222378999999877665554    4444 4 79999999876531           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH-----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE-----HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                 .++...|+.+|...+.+++.++.+     .+++++++||+.+++|.... .+...   .........+.
T Consensus       149 -----------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~---~~~~~~~~~~~  213 (251)
T 1zk4_A          149 -----------DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD-LPGAE---EAMSQRTKTPM  213 (251)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT-STTHH---HHHTSTTTCTT
T ss_pred             -----------CCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh-cCchh---hhHHHhhcCCC
Confidence                       123567999999999999887753     47999999999999985332 11110   01001111111


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                           ..+++++|+|+++++++....   .+..+++++.
T Consensus       214 -----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  247 (251)
T 1zk4_A          214 -----GHIGEPNDIAYICVYLASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             -----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCCcCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence                 368999999999999997642   2446677554

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.93  E-value=1.2e-24  Score=186.19  Aligned_cols=215  Identities=14%  Similarity=0.098  Sum_probs=151.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++||||||+|+||+++++.|+++|++|++++| ++..... ...+...   ..++.++.+|++|++++.++++      
T Consensus        44 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           44 NKVALVTGAGRGIGREIAKMLAKSVSHVICISR-TQKSCDSVVDEIKSF---GYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEES-SHHHHHHHHHHHHTT---TCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcC-CHHHHHHHHHHHHhc---CCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999888 4322222 2222221   2468899999999999887763      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|+|||+||....      ..+.+ ...+++|+.++.++++++.    +.+ .++||++||...+..           
T Consensus       120 ~~id~li~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~-----------  186 (285)
T 2c07_A          120 KNVDILVNNAGITRDNLFLRMKNDEW-EDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTG-----------  186 (285)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHH-HHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHC-----------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccC-----------
Confidence             68999999987542      12233 3789999999877777665    344 679999999876531           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .++...|+.+|...+.+++.++.+.   |++++++||+.+.++.... ...   ........ ..+.  
T Consensus       187 -----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~---~~~~~~~~-~~~~--  248 (285)
T 2c07_A          187 -----------NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISE---QIKKNIIS-NIPA--  248 (285)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCH---HHHHHHHT-TCTT--
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh-cCH---HHHHHHHh-hCCC--
Confidence                       1234579999999999999988764   8999999999999885432 111   11111111 1111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                         ..+++++|+|+++++++....   .+..++++++
T Consensus       249 ---~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG  282 (285)
T 2c07_A          249 ---GRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG  282 (285)
T ss_dssp             ---SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCC
Confidence               258999999999999987643   3446677554

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.93  E-value=5.4e-25  Score=186.28  Aligned_cols=214  Identities=14%  Similarity=0.132  Sum_probs=150.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+|++|||||+|+||++++++|+++|++|++++| +...........     ..++.++.+|++|+++++++++      
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGT-REDKLKEIAADL-----GKDVFVFSANLSDRKSIKQLAEVAEREM   99 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHh-----CCceEEEEeecCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999 432222221111     2478999999999998887765      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++||+||....      +.+++. +.+++|+.++..+.+++    ++.+ ..+||++||...+..           
T Consensus       100 g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~-----------  166 (266)
T 3grp_A          100 EGIDILVNNAGITRDGLFVRMQDQDWD-DVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVG-----------  166 (266)
T ss_dssp             TSCCEEEECCCCC-----CCCHHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC----------------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCC-----------
Confidence             68999999997542      122344 78999999966666554    4444 579999999876531           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .++...|+.+|...+.+.+.++.++   |++++.++||.+.++..... ..   ........ ..+.  
T Consensus       167 -----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~-~~---~~~~~~~~-~~p~--  228 (266)
T 3grp_A          167 -----------NPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL-NE---KQKEAIMA-MIPM--  228 (266)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC-CH---HHHHHHHT-TCTT--
T ss_pred             -----------CCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc-CH---HHHHHHHh-cCCC--
Confidence                       1235679999999999999988764   89999999999988743221 11   11111111 1122  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                         ..+.+++|+|+++++++....   .+..++++|.
T Consensus       229 ---~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 3grp_A          229 ---KRMGIGEEIAFATVYLASDEAAYLTGQTLHINGG  262 (266)
T ss_dssp             ---CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence               268899999999999987643   2446677654

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.93  E-value=1.9e-24  Score=182.16  Aligned_cols=217  Identities=14%  Similarity=0.103  Sum_probs=155.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEE-EcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTT-VRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +|++|||||+|+||++++++|+++|++|+++ +| +....... ..+...   ..++.++.+|++|++++.++++     
T Consensus         4 ~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (258)
T 3oid_A            4 NKCALVTGSSRGVGKAAAIRLAENGYNIVINYAR-SKKAALETAEEIEKL---GVKVLVVKANVGQPAKIKEMFQQIDET   79 (258)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHHHTT---TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            6889999999999999999999999999987 56 43322222 222221   3578999999999998887765     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||....      ..+++. ..+++|+.++.++++++.    +.+ ..+||++||...+..          
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~----------  147 (258)
T 3oid_A           80 FGRLDVFVNNAASGVLRPVMELEETHWD-WTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRY----------  147 (258)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTSB----------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCCC----------
Confidence              57999999986432      222333 789999999999988874    333 579999999776521          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .++...|+.+|...+.+.+.++.++   |++++.++||.+.++..... ... ......... ..+. 
T Consensus       148 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~-~~~~~~~~~-~~p~-  211 (258)
T 3oid_A          148 ------------LENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHF-PNR-EDLLEDARQ-NTPA-  211 (258)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGC-TTH-HHHHHHHHH-HCTT-
T ss_pred             ------------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhc-ccC-HHHHHHHHh-cCCC-
Confidence                        1335689999999999999998875   89999999999998854322 111 111111111 1111 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                          ..+.+++|+|+++++++....   .+..++++|.
T Consensus       212 ----~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG  245 (258)
T 3oid_A          212 ----GRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGG  245 (258)
T ss_dssp             ----SSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTT
T ss_pred             ----CCCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence                268899999999999998643   2446777554

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.93  E-value=2e-24  Score=180.96  Aligned_cols=216  Identities=14%  Similarity=0.138  Sum_probs=152.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++|+++..... ...+...   ..++.++.+|++|++++.++++      
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            4 GKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL---GSDAIAVRADVANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            68899999999999999999999999999999833322221 1222211   2468899999999998887775      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++||+||....      +.+++. ..+++|+.++..+.+++.    +.+ .++||++||...+. +          
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~-~----------  147 (246)
T 2uvd_A           81 GQVDILVNNAGVTKDNLLMRMKEEEWD-TVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVT-G----------  147 (246)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH-C----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcC-C----------
Confidence             68999999996542      122333 789999999776666554    444 68999999986542 1          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .++...|+.+|...+.+.+.++.++   |+++++++||.+.++..... ........  ...  .+.  
T Consensus       148 -----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~--~~~--~p~--  209 (246)
T 2uvd_A          148 -----------NPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVL-DENIKAEM--LKL--IPA--  209 (246)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC-CTTHHHHH--HHT--CTT--
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhc-CHHHHHHH--Hhc--CCC--
Confidence                       1234679999999999998887664   89999999999998854321 11111111  111  111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                         ..+++++|+|+++++++....   .+..+++.|.
T Consensus       210 ---~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  243 (246)
T 2uvd_A          210 ---AQFGEAQDIANAVTFFASDQSKYITGQTLNVDGG  243 (246)
T ss_dssp             ---CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCcCHHHHHHHHHHHcCchhcCCCCCEEEECcC
Confidence               258999999999999997532   2445666554

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=3.2e-24  Score=180.15  Aligned_cols=209  Identities=16%  Similarity=0.177  Sum_probs=147.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +++||||||+|+||++++++|+++|  ++|++++| ++.....+..+     ...++.++.+|++|++++.++++     
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r-~~~~~~~l~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR-DVEKATELKSI-----KDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEES-SGGGCHHHHTC-----CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEec-CHHHHHHHHhc-----cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence            6899999999999999999999999  99999999 44333333222     13578999999999998887776     


Q ss_pred             ----CCCEEEEccCCCC-CC-----CCchHHHHHHHHHhHHHHHHHHHHhc----------CC----ccEEEEeccceee
Q 020334           78 ----GCAGVIHVAAPID-ID-----GKETEEVMTQRAVNGTIGILKSCLKS----------GT----VKRFVYTSSGSTV  133 (327)
Q Consensus        78 ----~~d~vih~a~~~~-~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~----~~~~v~~SS~~v~  133 (327)
                          ++|+||||||... ..     ..+.....+++|+.++.++++++.+.          +.    .++||++||...+
T Consensus        77 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  156 (250)
T 1yo6_A           77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             cCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence                7999999998654 11     11222378999999999988877643          10    4699999998765


Q ss_pred             eecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHH
Q 020334          134 YFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRST  210 (327)
Q Consensus       134 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~  210 (327)
                      ....      .+..+         ..+...|+.+|...+.+++.++.++   ++++++++|+.+.++....         
T Consensus       157 ~~~~------~~~~~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------  212 (250)
T 1yo6_A          157 ITDN------TSGSA---------QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK---------  212 (250)
T ss_dssp             STTC------CSTTS---------SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------
T ss_pred             cCCc------ccccc---------cCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC---------
Confidence            3110      01111         1346689999999999999998875   8999999999998874211         


Q ss_pred             HHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCceEE-Eecccc
Q 020334          211 LAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKGRYI-CSSAKL  259 (327)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~y~-~~~~~~  259 (327)
                                      ..+++++|+|++++.++....  ..|.|+ +.++.+
T Consensus       213 ----------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  248 (250)
T 1yo6_A          213 ----------------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPY  248 (250)
T ss_dssp             ----------------------HHHHHHHHHHHTTCCGGGTTCEEETTEEEC
T ss_pred             ----------------CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCcCC
Confidence                            036789999999999998764  245554 444433

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.93  E-value=1.4e-24  Score=184.50  Aligned_cols=218  Identities=17%  Similarity=0.073  Sum_probs=156.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++| ..........+...   ..++.++.+|++|.+++.++.+      
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~g  105 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGR-TDGVKEVADEIADG---GGSAEAVVADLADLEGAANVAEELAATR  105 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-STHHHHHHHHHHTT---TCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcC-HHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence            3578999999999999999999999999999997 43222223333222   3578999999999988876643      


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|++||+||....      +.+++. ..+++|+.++..+++++.    +.+ ..+||++||...+..            
T Consensus       106 ~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~------------  171 (273)
T 3uf0_A          106 RVDVLVNNAGIIARAPAEEVSLGRWR-EVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQG------------  171 (273)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC------------
T ss_pred             CCcEEEECCCCCCCCCchhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCC------------
Confidence            78999999997542      223344 789999999999988764    344 579999999876521            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                .++...|+.+|...+.+.+.++.+   .|++++.++||.+.+|........  ........ ...+.   
T Consensus       172 ----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~-~~~p~---  235 (273)
T 3uf0_A          172 ----------GRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRAD--DERAAEIT-ARIPA---  235 (273)
T ss_dssp             ----------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS--HHHHHHHH-HHSTT---
T ss_pred             ----------CCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccC--HHHHHHHH-hcCCC---
Confidence                      133567999999999999999887   489999999999999853211000  00111111 01111   


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          225 LNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                        ..+..++|+|+++++++....   .|..++++|.
T Consensus       236 --~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG  269 (273)
T 3uf0_A          236 --GRWATPEDMVGPAVFLASDAASYVHGQVLAVDGG  269 (273)
T ss_dssp             --SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence              268899999999999997633   2446677554

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.93  E-value=1.8e-24  Score=183.46  Aligned_cols=214  Identities=14%  Similarity=0.103  Sum_probs=156.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++|++......+ ..+...   ..++.++.+|++|+++++++++     
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA---GGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc---CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999998443322222 222221   2578899999999998887765     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||....      +.+++. ..+++|+.++.++++++.+    .+ ..+||++||...+..          
T Consensus       104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~----------  171 (269)
T 4dmm_A          104 WGRLDVLVNNAGITRDTLLLRMKRDDWQ-SVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMG----------  171 (269)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHHC----------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCC----------
Confidence              68999999997542      223344 7899999999998887643    33 579999999876531          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .+....|+.+|...+.+.+.++.++   |+++++++||.+.++....    ...   .... ...+. 
T Consensus       172 ------------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~----~~~---~~~~-~~~p~-  230 (269)
T 4dmm_A          172 ------------NPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE----LAA---EKLL-EVIPL-  230 (269)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH----HHH---HHHG-GGCTT-
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc----ccH---HHHH-hcCCC-
Confidence                        1235679999999999999988764   8999999999999875321    111   1111 11122 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC----CCceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD----AKGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~----~~~~y~~~~~  257 (327)
                          ..+.+++|+|+++++++..+.    .+..++++|+
T Consensus       231 ----~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG  265 (269)
T 4dmm_A          231 ----GRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGG  265 (269)
T ss_dssp             ----SSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTT
T ss_pred             ----CCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCC
Confidence                268899999999999998732    2446777554

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=1.2e-24  Score=183.48  Aligned_cols=214  Identities=16%  Similarity=0.092  Sum_probs=150.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|++|||||+|+||++++++|+++|++|++++| +++.......+       .+ .++.+|++|++++.++++       
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~-------~~-~~~~~D~~~~~~~~~~~~~~~~~~g   76 (256)
T 2d1y_A            6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDL-RPEGKEVAEAI-------GG-AFFQVDLEDERERVRFVEEAAYALG   76 (256)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-STTHHHHHHHH-------TC-EEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHh-------hC-CEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999 43332211211       13 788999999988877664       


Q ss_pred             CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|++||+||.....      .+++ ...+++|+.++.++++++.+    .+ .++||++||...+..            
T Consensus        77 ~iD~lv~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~------------  142 (256)
T 2d1y_A           77 RVDVLVNNAAIAAPGSALTVRLPEW-RRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFA------------  142 (256)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSB------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccCC------------
Confidence            689999999865421      1233 37899999999999887754    33 679999999865421            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchH--HHHHHHHhCCccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSV--RSTLAMVLGNREEYS  222 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~--~~~~~~~~~~~~~~~  222 (327)
                                .++...|+.+|...+.+.+.++.++   ++++++++|+.+.++..........  ......... ..+  
T Consensus       143 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~--  209 (256)
T 2d1y_A          143 ----------EQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWED-LHA--  209 (256)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHT-TST--
T ss_pred             ----------CCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHh-cCC--
Confidence                      1234679999999999999988764   8999999999998763110000000  000000000 011  


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                         ...+++++|+|+++++++....   .+..+++.+.
T Consensus       210 ---~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG  244 (256)
T 2d1y_A          210 ---LRRLGKPEEVAEAVLFLASEKASFITGAILPVDGG  244 (256)
T ss_dssp             ---TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence               1368999999999999987642   3446777554

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.93  E-value=2.4e-25  Score=186.44  Aligned_cols=215  Identities=15%  Similarity=0.155  Sum_probs=153.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEE-EcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTT-VRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +|+||||||+|+||++++++|+++|++|+++ .| ++.....+ ..+...   ..++.++.+|++|++++.++++     
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYAR-SAKAAEEVSKQIEAY---GGQAITFGGDVSKEADVEAMMKTAIDA   76 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHHHHH---TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHHHhc---CCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            3689999999999999999999999999985 56 43222221 112111   2468889999999999888775     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|+|||+||....      ..+++ .+.+++|+.++.++++++.+.    + .++||++||...+. +         
T Consensus        77 ~g~id~li~~Ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~-~---------  144 (244)
T 1edo_A           77 WGTIDVVVNNAGITRDTLLIRMKKSQW-DEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLI-G---------  144 (244)
T ss_dssp             SSCCSEEEECCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH-C---------
T ss_pred             cCCCCEEEECCCCCCCcCcccCCHHHH-HHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcC-C---------
Confidence              68999999987542      12233 378999999999998887653    4 67999999986542 1         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .++...|+.+|...+.+++.+++++   +++++++||+.++++..... ..   ........ ..+. 
T Consensus       145 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~---~~~~~~~~-~~~~-  206 (244)
T 1edo_A          145 ------------NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL-GE---DMEKKILG-TIPL-  206 (244)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT-CH---HHHHHHHT-SCTT-
T ss_pred             ------------CCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc-Ch---HHHHHHhh-cCCC-
Confidence                        1234579999999999999888764   89999999999998753221 11   11111111 1111 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC----CCceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD----AKGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~----~~~~y~~~~~  257 (327)
                          ..+++++|+|+++++++..+.    .+..|++++.
T Consensus       207 ----~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG  241 (244)
T 1edo_A          207 ----GRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG  241 (244)
T ss_dssp             ----CSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred             ----CCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCC
Confidence                268999999999999984432    2446777554

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.93  E-value=1.1e-24  Score=185.71  Aligned_cols=220  Identities=16%  Similarity=0.144  Sum_probs=157.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| +......+ ..+..   ...++.++.+|++|++++.++++      
T Consensus         8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            8 GKIAIVTGASSGIGRAAALLFAREGAKVVVTAR-NGNALAELTDEIAG---GGGEAAALAGDVGDEALHEALVELAVRRF   83 (280)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCS-CHHHHHHHHHHHTT---TTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999 43322222 22221   13578999999999998887765      


Q ss_pred             -CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 -GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 -~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                       ++|++|||||....       +.+++. ..+++|+.++..+++++.+.    + ..++|++||...+..+         
T Consensus        84 g~iD~lvnnAg~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~---------  152 (280)
T 3tox_A           84 GGLDTAFNNAGALGAMGEISSLSVEGWR-ETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTAG---------  152 (280)
T ss_dssp             SCCCEEEECCCCCCSCSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTTBC---------
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCcCC---------
Confidence             68999999996531       223344 88999999999998877543    3 5699999997655111         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .++...|+.+|...+.+.+.++.++   |++++.++||.+.+|.................... .+. 
T Consensus       153 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~p~-  218 (280)
T 3tox_A          153 ------------FAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGL-HAL-  218 (280)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTT-STT-
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhcc-Ccc-
Confidence                        1335679999999999999998775   89999999999999864321111111111111111 112 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                          ..+..++|+|+++++++....   .|.++++.|.
T Consensus       219 ----~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  252 (280)
T 3tox_A          219 ----KRIARPEEIAEAALYLASDGASFVTGAALLADGG  252 (280)
T ss_dssp             ----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----CCCcCHHHHHHHHHHHhCccccCCcCcEEEECCC
Confidence                268899999999999997643   2446777554

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.93  E-value=2.5e-24  Score=180.66  Aligned_cols=216  Identities=15%  Similarity=0.108  Sum_probs=148.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++|+..+....  .+...   ..++.++.+|++|++++.++++       
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (249)
T 2ew8_A            7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA--AIRNL---GRRVLTVKCDVSQPGDVEAFGKQVISTFG   81 (249)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH--HHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH--HHHhc---CCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999933122211  12111   2468899999999998887653       


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHH----HHhcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKS----CLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|++||+||....      +.+++. ..+++|+.++.+++++    +++.+ .++||++||...+..            
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~------------  147 (249)
T 2ew8_A           82 RCDILVNNAGIYPLIPFDELTFEQWK-KTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLK------------  147 (249)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSC------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccC------------
Confidence            78999999996542      122333 7899999998877777    55555 689999999876631            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                .++...|+.+|...+.+.+.++.++   |+++++++||.+.++..............   .  ....   
T Consensus       148 ----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~---~--~~~~---  209 (249)
T 2ew8_A          148 ----------IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVL---P--NMLQ---  209 (249)
T ss_dssp             ----------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-----------------------CTTS---
T ss_pred             ----------CCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHH---H--HhhC---
Confidence                      1335679999999999999998764   89999999999998853311100000000   0  0000   


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          225 LNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ....+.+++|+|+++++++....   .+..+++.+.
T Consensus       210 ~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG  245 (249)
T 2ew8_A          210 AIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGG  245 (249)
T ss_dssp             SSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             ccCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCC
Confidence            11258899999999999997532   2345666554

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.93  E-value=2.4e-24  Score=181.64  Aligned_cols=213  Identities=18%  Similarity=0.126  Sum_probs=149.1

Q ss_pred             CCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            2 EEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      ...+|++|||||+|+||.+++++|+++|++|++++| +....  ...+..     .++.++.+|++|++++.++++    
T Consensus        24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~--~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (260)
T 3gem_A           24 TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYR-TEHAS--VTELRQ-----AGAVALYGDFSCETGIMAFIDLLKT   95 (260)
T ss_dssp             ---CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEES-SCCHH--HHHHHH-----HTCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-ChHHH--HHHHHh-----cCCeEEECCCCCHHHHHHHHHHHHH
Confidence            334678999999999999999999999999999999 43221  111211     247899999999998887765    


Q ss_pred             ---CCCEEEEccCCCCCCC-----CchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 ---GCAGVIHVAAPIDIDG-----KETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 ---~~d~vih~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                         ++|++||+||......     +++ ...+++|+.++..+++++...   ....+||++||...+..           
T Consensus        96 ~~g~iD~lv~nAg~~~~~~~~~~~~~~-~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------  163 (260)
T 3gem_A           96 QTSSLRAVVHNASEWLAETPGEEADNF-TRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKG-----------  163 (260)
T ss_dssp             HCSCCSEEEECCCCCCCCCTTCHHHHH-HHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTC-----------
T ss_pred             hcCCCCEEEECCCccCCCCCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC-----------
Confidence               6899999999654221     122 368999999999998877542   12579999999876521           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                 .++...|+.+|...+.+.+.++.++  +++++.++||.+.++....  ....    .... ...+.   
T Consensus       164 -----------~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~--~~~~----~~~~-~~~p~---  222 (260)
T 3gem_A          164 -----------SSKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD--AAYR----ANAL-AKSAL---  222 (260)
T ss_dssp             -----------CSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC----------------------CCS---
T ss_pred             -----------CCCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC--HHHH----HHHH-hcCCC---
Confidence                       1335679999999999999998876  5999999999998874321  1111    0000 11111   


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 020334          225 LNISMVHIDDVARAHIFLLEYPDAKG-RYICSSA  257 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~  257 (327)
                        ..+..++|+|++++++++.....| .++++|.
T Consensus       223 --~r~~~~edva~~v~~L~~~~~itG~~i~vdGG  254 (260)
T 3gem_A          223 --GIEPGAEVIYQSLRYLLDSTYVTGTTLTVNGG  254 (260)
T ss_dssp             --CCCCCTHHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred             --CCCCCHHHHHHHHHHHhhCCCCCCCEEEECCC
Confidence              146789999999999997655444 6677554

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.93  E-value=3.8e-24  Score=182.73  Aligned_cols=228  Identities=16%  Similarity=0.118  Sum_probs=156.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC---------CcchhhhhhC-CCCCCCCeEEEeCCCCChhHHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE---------HKKDLSFLTN-LPGASERLQIFNADLNDPESFDA   74 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~   74 (327)
                      +|++|||||+|+||.+++++|+++|++|++++|+.+.         ....+..+.. ......++.++.+|++|++++.+
T Consensus        15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   94 (280)
T 3pgx_A           15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRE   94 (280)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence            5789999999999999999999999999999983211         1111211110 01113578899999999998887


Q ss_pred             Hhc-------CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecC
Q 020334           75 AIA-------GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSG  137 (327)
Q Consensus        75 ~~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~  137 (327)
                      +++       ++|++||+||....      +.+++. ..+++|+.++.++++++.+    .+...+||++||...+..  
T Consensus        95 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--  171 (280)
T 3pgx_A           95 LVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWD-TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA--  171 (280)
T ss_dssp             HHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC--
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC--
Confidence            765       68999999997542      223333 7899999999998888743    222468999999876521  


Q ss_pred             CCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHH
Q 020334          138 KDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV  214 (327)
Q Consensus       138 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~  214 (327)
                                          .+....|+.+|...+.+.+.++.+   .|++++.++||.+++|....   ..........
T Consensus       172 --------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---~~~~~~~~~~  228 (280)
T 3pgx_A          172 --------------------TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEP---EAMMEIFARH  228 (280)
T ss_dssp             --------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCH---HHHHHHHHHC
T ss_pred             --------------------CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccch---hhhhhhhhcC
Confidence                                133567999999999999999887   58999999999999986432   1111111110


Q ss_pred             hCCccc--cccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEeccc
Q 020334          215 LGNREE--YSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSAK  258 (327)
Q Consensus       215 ~~~~~~--~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~~  258 (327)
                      ......  ........+++++|+|+++++++....   .+..++++|..
T Consensus       229 ~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          229 PSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             GGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             chhhhhhhhcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            000000  111111248999999999999997543   24466776654

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.93  E-value=2e-24  Score=184.37  Aligned_cols=232  Identities=19%  Similarity=0.162  Sum_probs=157.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC--------CcchhhhhhC-CCCCCCCeEEEeCCCCChhHHHH
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE--------HKKDLSFLTN-LPGASERLQIFNADLNDPESFDA   74 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~   74 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++|+...        ....+..... ......++.++.+|++|++++.+
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            35789999999999999999999999999999994210        1111111100 00012578999999999998888


Q ss_pred             Hhc-------CCCEEEEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCC
Q 020334           75 AIA-------GCAGVIHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVD  141 (327)
Q Consensus        75 ~~~-------~~d~vih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~  141 (327)
                      +++       ++|++|||||.....  .+++. ..+++|+.++..+++++.+.    +...+||++||...+....    
T Consensus        92 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  166 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAGIAPMSAGDDGWH-DVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG----  166 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCCCCCCSSTHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC----
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc----
Confidence            775       789999999976532  23344 88999999999999886542    2246999999987653110    


Q ss_pred             cccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHH-HH-hC
Q 020334          142 MLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLA-MV-LG  216 (327)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~-~~-~~  216 (327)
                         ..           .++...|+.+|...+.+.+.++.++   |++++.++||.|.+|.....   ....... .. ..
T Consensus       167 ---~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~  229 (278)
T 3sx2_A          167 ---SA-----------DPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNE---FTREWLAKMAAAT  229 (278)
T ss_dssp             ---CS-----------SHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH---HHHHHHHHHHHHC
T ss_pred             ---cC-----------CCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhh---hHHHHHhhccchh
Confidence               00           1234579999999999999998765   79999999999999864321   1111111 11 11


Q ss_pred             Cc-cccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          217 NR-EEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       217 ~~-~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .. ..+.......+++++|+|+++++++....   .+..++++|.
T Consensus       230 ~~~~~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  274 (278)
T 3sx2_A          230 DTPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAG  274 (278)
T ss_dssp             C--CTTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hhhhhhhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCC
Confidence            10 11111111478999999999999997543   2446677654

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.92  E-value=1.9e-24  Score=182.41  Aligned_cols=222  Identities=18%  Similarity=0.130  Sum_probs=153.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|+++++++...... ...+...   ..++.++.+|++|++++.++++     
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL---GRSALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT---TSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999986634332222 2222222   3578999999999998887775     


Q ss_pred             --CCCEEEEccCCCC-------CCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 --GCAGVIHVAAPID-------IDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 --~~d~vih~a~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                        ++|++||+||...       .+.+.+. ..+++|+.++.++++++.+.- ...++|++||...+..+           
T Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  151 (259)
T 3edm_A           84 FGEIHGLVHVAGGLIARKTIAEMDEAFWH-QVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGG-----------  151 (259)
T ss_dssp             HCSEEEEEECCCCCCCCCCTTTCCHHHHH-HHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCC-----------
T ss_pred             hCCCCEEEECCCccCCCCChhhCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCC-----------
Confidence              6899999998652       1122333 789999999999999998763 12489999998765101           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                                .++...|+.+|...+.+.+.++.++  +++++.+.||.+.++........   ...... ....+.    
T Consensus       152 ----------~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~---~~~~~~-~~~~p~----  213 (259)
T 3edm_A          152 ----------GPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKP---EVRERV-AGATSL----  213 (259)
T ss_dssp             ----------STTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-----------------------------
T ss_pred             ----------CCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccCh---HHHHHH-HhcCCC----
Confidence                      1335679999999999999998876  39999999999988753321110   000100 011111    


Q ss_pred             CCCeeeHHHHHHHHHHhhcCCC---CCceEEEecccc
Q 020334          226 NISMVHIDDVARAHIFLLEYPD---AKGRYICSSAKL  259 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~~~  259 (327)
                       ..+.+++|+|+++++++....   .|..+++.|+..
T Consensus       214 -~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~  249 (259)
T 3edm_A          214 -KREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVL  249 (259)
T ss_dssp             --CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSS
T ss_pred             -CCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcC
Confidence             267899999999999997643   344677876543

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.92  E-value=5.6e-24  Score=182.12  Aligned_cols=218  Identities=12%  Similarity=0.030  Sum_probs=154.8

Q ss_pred             CCeEEEeCCc--chhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGT--GFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +|++|||||+  |+||.++++.|+++|++|++++| ++.....+..+...   .+++.++.+|++|++++.++++     
T Consensus        21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYA-TPKLEKRVREIAKG---FGSDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHh---cCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4789999999  99999999999999999999999 43322233333221   1246889999999998887765     


Q ss_pred             --CCCEEEEccCCCCC----------CCCchHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCCCcc
Q 020334           78 --GCAGVIHVAAPIDI----------DGKETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 --~~d~vih~a~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                        ++|++||+||....          +.+++ ...+++|+.++.++++++.+.-  +.++||++||...+..        
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~--------  167 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGF-KIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKV--------  167 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHH-HHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSB--------
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccC--------
Confidence              68999999986531          12233 3789999999999999988652  1369999999765421        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    .++...|+.+|...+.+++.++.++   |+++++++||.+++|..... .. ........... .+
T Consensus       168 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~-~~~~~~~~~~~-~p  230 (285)
T 2p91_A          168 --------------VPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI-TG-FHLLMEHTTKV-NP  230 (285)
T ss_dssp             --------------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--C-TT-HHHHHHHHHHH-ST
T ss_pred             --------------CCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcc-cc-hHHHHHHHHhc-CC
Confidence                          1224579999999999999988764   89999999999999864321 11 11111111111 11


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .     ..+.+++|+|+++++++....   .+..|++.+.
T Consensus       231 ~-----~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg  265 (285)
T 2p91_A          231 F-----GKPITIEDVGDTAVFLCSDWARAITGEVVHVDNG  265 (285)
T ss_dssp             T-----SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             C-----CCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence            1     157899999999999987533   2446677554

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.92  E-value=1e-24  Score=185.45  Aligned_cols=219  Identities=17%  Similarity=0.174  Sum_probs=149.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++||||||+|+||++++++|+++|++|+++.+++......+ ..+...   ..++.++.+|++|.+++.++++      
T Consensus        26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES---GGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999988755343332222 222211   2578999999999998887765      


Q ss_pred             -CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHHhc------CCccEEEEeccceeeeecCCCCCcc
Q 020334           78 -GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCLKS------GTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 -~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                       ++|+|||+||....       +.+++ .+.+++|+.++..+++++.+.      +...+||++||...+...       
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  174 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDEMSVERI-ERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS-------  174 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC-------
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHH-HHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC-------
Confidence             68999999997542       22233 378999999999998877653      124689999998765311       


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    ......|+.+|...+.+++.++.++   |+++++++||.+.++......   ......... ...+
T Consensus       175 --------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~-~~~~  236 (272)
T 4e3z_A          175 --------------ATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG---LPDRAREMA-PSVP  236 (272)
T ss_dssp             --------------TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------------CCT
T ss_pred             --------------CCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccC---ChHHHHHHh-hcCC
Confidence                          1124569999999999999998775   899999999999998543210   111111111 1111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .     ..+.+++|+|+++++++....   .+.+++++++
T Consensus       237 ~-----~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          237 M-----QRAGMPEEVADAILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             T-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             c-----CCCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence            1     257889999999999987543   2446777653

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.92  E-value=1.8e-24  Score=182.40  Aligned_cols=216  Identities=19%  Similarity=0.182  Sum_probs=152.8

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |...+|++|||||+|+||.+++++|+++|++|++++| ...  .....+      ..++.++.+|++|++++.++++   
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~--~~~~~~------~~~~~~~~~D~~~~~~v~~~~~~~~   75 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDI-RGE--DVVADL------GDRARFAAADVTDEAAVASALDLAE   75 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEES-SCH--HHHHHT------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-chH--HHHHhc------CCceEEEECCCCCHHHHHHHHHHHH
Confidence            4444688999999999999999999999999999999 321  111111      2578999999999998887775   


Q ss_pred             ---CCCEEEEccCCCC----------CCCCchHHHHHHHHHhHHHHHHHHHHhc-----------CCccEEEEeccceee
Q 020334           78 ---GCAGVIHVAAPID----------IDGKETEEVMTQRAVNGTIGILKSCLKS-----------GTVKRFVYTSSGSTV  133 (327)
Q Consensus        78 ---~~d~vih~a~~~~----------~~~~~~~~~~~~~nv~~~~~l~~~~~~~-----------~~~~~~v~~SS~~v~  133 (327)
                         ++|++|||||...          .+.+++. +.+++|+.++..+++++.+.           ....++|++||...+
T Consensus        76 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tl3_A           76 TMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFR-KIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF  154 (257)
T ss_dssp             HHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--
T ss_pred             HhCCCCEEEECCCCCCCcccccccccCCHHHHH-HHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc
Confidence               7999999998642          2233344 88999999999998887753           114589999998766


Q ss_pred             eecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHH
Q 020334          134 YFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRST  210 (327)
Q Consensus       134 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~  210 (327)
                      ..                      .++...|+.||...+.+.+.++.++   |++++.++||.+.++..... ...   .
T Consensus       155 ~~----------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~---~  208 (257)
T 3tl3_A          155 DG----------------------QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL-PEE---A  208 (257)
T ss_dssp             CC----------------------HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC----CHH---H
T ss_pred             CC----------------------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc-cHH---H
Confidence            31                      1224579999999999999988764   89999999999988854321 111   1


Q ss_pred             HHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 020334          211 LAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKG-RYICSSA  257 (327)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~  257 (327)
                      ....... .+.    ...+.+++|+|++++++++.....| .+++.|.
T Consensus       209 ~~~~~~~-~~~----~~r~~~p~dva~~v~~l~s~~~itG~~i~vdGG  251 (257)
T 3tl3_A          209 RASLGKQ-VPH----PSRLGNPDEYGALAVHIIENPMLNGEVIRLDGA  251 (257)
T ss_dssp             HHHHHHT-SSS----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             HHHHHhc-CCC----CCCccCHHHHHHHHHHHhcCCCCCCCEEEECCC
Confidence            1111111 111    0258899999999999998765555 5566544

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.92  E-value=2.1e-24  Score=179.52  Aligned_cols=195  Identities=23%  Similarity=0.208  Sum_probs=137.0

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |+.|+++||||||+|+||++++++|+++|++|++++| ++.....+..  ..    .++.++.+|++|.+++.++++   
T Consensus         1 M~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~--~~----~~~~~~~~D~~~~~~~~~~~~~~~   73 (234)
T 2ehd_A            1 MEGMKGAVLITGASRGIGEATARLLHAKGYRVGLMAR-DEKRLQALAA--EL----EGALPLPGDVREEGDWARAVAAME   73 (234)
T ss_dssp             ---CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--HS----TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHH--Hh----hhceEEEecCCCHHHHHHHHHHHH
Confidence            7777889999999999999999999999999999999 4322222111  11    267899999999998877664   


Q ss_pred             ----CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHH----HHhcCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 ----GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKS----CLKSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ----~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                          ++|+|||+||....      ..+++ ...+++|+.++..+++.    +++.+ .++||++||...+..        
T Consensus        74 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~--------  143 (234)
T 2ehd_A           74 EAFGELSALVNNAGVGVMKPVHELTLEEW-RLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNP--------  143 (234)
T ss_dssp             HHHSCCCEEEECCCCCCCSCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTSC--------
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcCC--------
Confidence                68999999986542      12233 37899999998755554    45555 689999999876521        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    .++...|+.+|...+.+++.++.+   .|++++++|||.+.++....     .       . ..  
T Consensus       144 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----~-------~-~~--  194 (234)
T 2ehd_A          144 --------------FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN-----T-------P-GQ--  194 (234)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC----------------------------
T ss_pred             --------------CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc-----c-------c-cc--
Confidence                          123567999999999999888765   48999999999988764211     0       0 00  


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                      +      .++.++|+|+++++++..+.
T Consensus       195 ~------~~~~~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          195 A------WKLKPEDVAQAVLFALEMPG  215 (234)
T ss_dssp             ---------CCHHHHHHHHHHHHHSCC
T ss_pred             c------CCCCHHHHHHHHHHHhCCCc
Confidence            0      15799999999999998753

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.92  E-value=2.5e-24  Score=182.08  Aligned_cols=219  Identities=14%  Similarity=0.060  Sum_probs=153.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++||||||+|+||++++++|+++|++|++++|+++..... ...+...   ..++.++.+|++|++++.++++      
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV---GGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc---CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999932222211 1222211   2467889999999998887765      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|+|||+||....      ..+++ .+.+++|+.++.++++++.+.    +..++||++||...+..           
T Consensus        84 g~id~li~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------  151 (261)
T 1gee_A           84 GKLDVMINNAGLENPVSSHEMSLSDW-NKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP-----------  151 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHH-HHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC-----------
Confidence             78999999986542      12233 378999999999888876643    21469999999765420           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .++...|+.+|...+.+++.++.++   +++++++||+.+++|.......  .......... ..+.  
T Consensus       152 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~-~~~~--  215 (261)
T 1gee_A          152 -----------WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFA--DPEQRADVES-MIPM--  215 (261)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHH--SHHHHHHHHT-TCTT--
T ss_pred             -----------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhccc--ChhHHHHHHh-cCCC--
Confidence                       1335689999999999999888764   8999999999999985321000  0111111111 1111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                         ..+++++|+|+++++++....   .+..+++.+.
T Consensus       216 ---~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  249 (261)
T 1gee_A          216 ---GYIGEPEEIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_dssp             ---SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCC
Confidence               268899999999999987532   2446677554

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.92  E-value=8e-24  Score=183.91  Aligned_cols=237  Identities=15%  Similarity=0.132  Sum_probs=153.1

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCC-CCcchhhhhhCC-CCCCCCeEEEeCCCCChhHHHHHhc-
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDP-EHKKDLSFLTNL-PGASERLQIFNADLNDPESFDAAIA-   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~-   77 (327)
                      |.+.+|++|||||+|+||.+++++|+++|++|++.+|+.. .....+..+... .....++.++.+|++|++++.++++ 
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~   80 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ   80 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence            5555688999999999999999999999999999999422 222222222110 0012478999999999999888776 


Q ss_pred             ------CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCC
Q 020334           78 ------GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVD  141 (327)
Q Consensus        78 ------~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~  141 (327)
                            ++|++|||||....      +.+++ ...+++|+.++.++++++    ++.+ .+++|++||...+...     
T Consensus        81 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~-----  153 (324)
T 3u9l_A           81 IIGEDGRIDVLIHNAGHMVFGPAEAFTPEQF-AELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGT-----  153 (324)
T ss_dssp             HHHHHSCCSEEEECCCCCBCSCGGGSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----
T ss_pred             HHHHcCCCCEEEECCCcCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCC-----
Confidence                  79999999996432      22233 378999999999999988    5555 6799999998765211     


Q ss_pred             cccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCC---CCchHHHHHHHHh
Q 020334          142 MLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPK---FAGSVRSTLAMVL  215 (327)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~---~~~~~~~~~~~~~  215 (327)
                                      .+....|+.||...|.+.+.++.+   .|+++++++||.+.++.....   .+...........
T Consensus       154 ----------------~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  217 (324)
T 3u9l_A          154 ----------------PPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEA  217 (324)
T ss_dssp             ----------------CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHH
T ss_pred             ----------------CCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhcc
Confidence                            122457999999999999999877   489999999999987643211   1111111111111


Q ss_pred             CCccccc-------cccCCCeeeHHHHHHHHHHhhcCCCC--CceEEEeccccC
Q 020334          216 GNREEYS-------ILLNISMVHIDDVARAHIFLLEYPDA--KGRYICSSAKLT  260 (327)
Q Consensus       216 ~~~~~~~-------~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~y~~~~~~~s  260 (327)
                      ......+       .....+..+++|+|++++.++..+..  ...+.+++....
T Consensus       218 ~~~~~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~  271 (324)
T 3u9l_A          218 GPNAGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDG  271 (324)
T ss_dssp             TTTTTHHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCS
T ss_pred             ccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchH
Confidence            0000000       00001336899999999999988742  224455544444

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.92  E-value=1.8e-24  Score=184.69  Aligned_cols=219  Identities=15%  Similarity=0.093  Sum_probs=153.5

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhh-hhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSF-LTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      ..+|+||||||+|+||++++++|+++|++|++++| +......... +...   ..++.++.+|++|++++.++++    
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~  107 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYN-SHPADEKAEHLQKTY---GVHSKAYKCNISDPKSVEETISQQEK  107 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEES-SSCCHHHHHHHHHHH---CSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCcceEEEeecCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999 4433322221 1111   2468899999999998887765    


Q ss_pred             ---CCCEEEEccCCCCC-C----C--CchHHHHHHHHHhH----HHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 ---GCAGVIHVAAPIDI-D----G--KETEEVMTQRAVNG----TIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ---~~d~vih~a~~~~~-~----~--~~~~~~~~~~nv~~----~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                         ++|+|||+||.... .    .  .+.....+++|+.+    ++.+++.+++.+ .++||++||...+...       
T Consensus       108 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~-------  179 (279)
T 3ctm_A          108 DFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVN-------  179 (279)
T ss_dssp             HHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC--------
T ss_pred             HhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCC-------
Confidence               48999999986532 1    1  11123678999999    567777777666 6899999997654210       


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                          .         .++...|+.+|...|.+++.++.++   + ++++++|+.+.++.... .....   ...+. ...+
T Consensus       180 ----~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~-~~~~~---~~~~~-~~~p  240 (279)
T 3ctm_A          180 ----I---------PQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDF-ASKDM---KAKWW-QLTP  240 (279)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSS-CCHHH---HHHHH-HHST
T ss_pred             ----C---------CCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccc-cChHH---HHHHH-HhCC
Confidence                0         1335679999999999999998874   6 99999999998885432 11111   11111 0111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .     ..+++++|+|+++++++....   .+..++++++
T Consensus       241 ~-----~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG  275 (279)
T 3ctm_A          241 L-----GREGLTQELVGGYLYLASNASTFTTGSDVVIDGG  275 (279)
T ss_dssp             T-----CSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             c-----cCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            1     258899999999999997632   3446677654

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.92  E-value=3.7e-24  Score=182.46  Aligned_cols=217  Identities=14%  Similarity=0.104  Sum_probs=153.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCCh----hHHHHHhc--
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDP----ESFDAAIA--   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~----~~~~~~~~--   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++|+++..... ...+....  ..++.++.+|++|.    +++.++++  
T Consensus        11 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A           11 CPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR--AGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc--CCceEEEeccCCCccccHHHHHHHHHHH
Confidence            47899999999999999999999999999999932221111 11221100  14688999999999    88877665  


Q ss_pred             -----CCCEEEEccCCCCCC------C-----------CchHHHHHHHHHhHHHHHHHHHHhcC--Cc------cEEEEe
Q 020334           78 -----GCAGVIHVAAPIDID------G-----------KETEEVMTQRAVNGTIGILKSCLKSG--TV------KRFVYT  127 (327)
Q Consensus        78 -----~~d~vih~a~~~~~~------~-----------~~~~~~~~~~nv~~~~~l~~~~~~~~--~~------~~~v~~  127 (327)
                           ++|++|||||.....      .           +.+ ...+++|+.++.++++++.+.-  ..      ++||++
T Consensus        89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i  167 (276)
T 1mxh_A           89 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQV-AELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL  167 (276)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHH-HHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred             HHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHH-HHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence                 689999999864321      1           233 3789999999999999988742  13      799999


Q ss_pred             ccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC
Q 020334          128 SSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFA  204 (327)
Q Consensus       128 SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~  204 (327)
                      ||...+..                      .++...|+.+|...+.+.+.++.++   |+++++++||.+++| . . ..
T Consensus       168 sS~~~~~~----------------------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~-~~  222 (276)
T 1mxh_A          168 CDAMTDLP----------------------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-A-MP  222 (276)
T ss_dssp             CCGGGGSC----------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-S-SC
T ss_pred             CchhhcCC----------------------CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-c-CC
Confidence            99876531                      1234679999999999999988775   899999999999998 2 1 12


Q ss_pred             chHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          205 GSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .   ......... .+.    .+++.+++|+|+++++++....   .+..+++++.
T Consensus       223 ~---~~~~~~~~~-~p~----~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  270 (276)
T 1mxh_A          223 Q---ETQEEYRRK-VPL----GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG  270 (276)
T ss_dssp             H---HHHHHHHTT-CTT----TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             H---HHHHHHHhc-CCC----CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCc
Confidence            1   111111111 111    1238899999999999997533   2446677654

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.92  E-value=3.4e-24  Score=179.41  Aligned_cols=196  Identities=11%  Similarity=0.087  Sum_probs=148.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-------eEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHh
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-------FVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAI   76 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~   76 (327)
                      +|+||||||+|+||++++++|+++|+       +|++++| ++.....+ ..+...   ..++.++.+|++|++++.+++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~   77 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR-TAADLEKISLECRAE---GALTDTITADISDMADVRRLT   77 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEES-CHHHHHHHHHHHHTT---TCEEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeC-CHHHHHHHHHHHHcc---CCeeeEEEecCCCHHHHHHHH
Confidence            57899999999999999999999999       9999999 43322222 122111   246889999999999888776


Q ss_pred             c-------CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCC
Q 020334           77 A-------GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKD  139 (327)
Q Consensus        77 ~-------~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~  139 (327)
                      +       ++|+|||+||....      ..+.+ ...+++|+.++.++++++.+    .+ .++||++||...+..    
T Consensus        78 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~----  151 (244)
T 2bd0_A           78 THIVERYGHIDCLVNNAGVGRFGALSDLTEEDF-DYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKA----  151 (244)
T ss_dssp             HHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC----
T ss_pred             HHHHHhCCCCCEEEEcCCcCCcCccccCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCC----
Confidence            5       68999999997542      12233 37899999999999888753    34 679999999876631    


Q ss_pred             CCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhC
Q 020334          140 VDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLG  216 (327)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~  216 (327)
                                        .++...|+.+|...+.+++.++.+   .|++++++|||.+++|..... ...          
T Consensus       152 ------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~----------  202 (244)
T 2bd0_A          152 ------------------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV-DDE----------  202 (244)
T ss_dssp             ------------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC-CST----------
T ss_pred             ------------------CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc-ccc----------
Confidence                              133567999999999999888765   489999999999999864321 110          


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                       .       ...+++++|+|+++++++..+.
T Consensus       203 -~-------~~~~~~~~dva~~~~~l~~~~~  225 (244)
T 2bd0_A          203 -M-------QALMMMPEDIAAPVVQAYLQPS  225 (244)
T ss_dssp             -T-------GGGSBCHHHHHHHHHHHHTSCT
T ss_pred             -c-------cccCCCHHHHHHHHHHHHhCCc
Confidence             0       1258899999999999998754

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.92  E-value=5.8e-24  Score=178.92  Aligned_cols=222  Identities=18%  Similarity=0.090  Sum_probs=158.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| +.+....+....     ..++.++.+|++|++++.++++       
T Consensus         8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (255)
T 4eso_A            8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGR-NESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQTLG   81 (255)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999 433322221111     2478999999999998876654       


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                      ++|++||+||....      +.+++. ..+++|+.++..+++++.+.- ...++|++||...+..               
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------  145 (255)
T 4eso_A           82 AIDLLHINAGVSELEPFDQVSEASYD-RQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG---------------  145 (255)
T ss_dssp             SEEEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB---------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC---------------
Confidence            68999999987542      223344 789999999999999998642 1358999999876531               


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC-CCchHH-HHHHHHhCCcccccccc
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPK-FAGSVR-STLAMVLGNREEYSILL  225 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~  225 (327)
                             .++...|+.+|...+.+.+.++.++   |++++.++||.+.+|..... ...... ....... ...+.    
T Consensus       146 -------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~p~----  213 (255)
T 4eso_A          146 -------HPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGD-NITPM----  213 (255)
T ss_dssp             -------CTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHH-HHSTT----
T ss_pred             -------CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHh-ccCCC----
Confidence                   1335679999999999999998875   89999999999999864321 111111 1111111 11111    


Q ss_pred             CCCeeeHHHHHHHHHHhhcCC-C-CCceEEEec-cccCH
Q 020334          226 NISMVHIDDVARAHIFLLEYP-D-AKGRYICSS-AKLTI  261 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~-~-~~~~y~~~~-~~~s~  261 (327)
                       ..+..++|+|+++++++... . .+..++++| ...++
T Consensus       214 -~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l  251 (255)
T 4eso_A          214 -KRNGTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKL  251 (255)
T ss_dssp             -SSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTB
T ss_pred             -CCCcCHHHHHHHHHHHcCcCcCccCCEEEECCCccccC
Confidence             26789999999999998752 2 234667754 34443

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.92  E-value=3.8e-24  Score=181.48  Aligned_cols=222  Identities=15%  Similarity=0.091  Sum_probs=152.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++| +++..... ..+.... ...++.++.+|++|++++.++++     
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDV-SSEGLEASKAAVLETA-PDAEVLTTVADVSDEAQVEAYVTATTER   89 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHHC-TTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhc-CCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 43322211 1221100 02468899999999998887765     


Q ss_pred             --CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHH----HHhcCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 --GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKS----CLKSGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 --~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        ++|++||+||....       ..+++. ..+++|+.++..++++    +++.+ .++||++||...+..         
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~---------  158 (267)
T 1iy8_A           90 FGRIDGFFNNAGIEGKQNPTESFTAAEFD-KVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRG---------  158 (267)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSB---------
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccC---------
Confidence              68999999986532       122333 7889999888765554    44444 679999999875521         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC----CCchHHHHHHHHhCC
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPK----FAGSVRSTLAMVLGN  217 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~----~~~~~~~~~~~~~~~  217 (327)
                                   .++...|+.+|...+.+.+.++.++   |+++++++||.+++|.....    .+.............
T Consensus       159 -------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  225 (267)
T 1iy8_A          159 -------------IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQV  225 (267)
T ss_dssp             -------------CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTT
T ss_pred             -------------CCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhcc
Confidence                         1335679999999999999888764   89999999999998742110    011111000011111


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                       .+.     ..+.+++|+|+++++++..+.   .+..+++.|.
T Consensus       226 -~p~-----~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG  262 (267)
T 1iy8_A          226 -NPS-----KRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG  262 (267)
T ss_dssp             -CTT-----CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -CCC-----CCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence             111     258899999999999987642   2345666543

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.92  E-value=4.3e-24  Score=182.41  Aligned_cols=225  Identities=16%  Similarity=0.046  Sum_probs=156.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .++++|||||+|+||.+++++|+++|++|++++| +...... ...+..   ...++.++.+|++|++++.++++     
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGR-TRTEVEEVADEIVG---AGGQAIALEADVSDELQMRNAVRDLVLK  102 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHTT---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 4332222 222222   13578999999999998887765     


Q ss_pred             --CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 --GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 --~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        ++|++||+||....       +.+++. ..+++|+.++..+++++    ++.+ ..+||++||...+....       
T Consensus       103 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~-------  173 (283)
T 3v8b_A          103 FGHLDIVVANAGINGVWAPIDDLKPFEWD-ETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTFT-------  173 (283)
T ss_dssp             HSCCCEEEECCCCCCCBCCTTTSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCC-------
T ss_pred             hCCCCEEEECCCCCCCCCchhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCCC-------
Confidence              68999999996431       122333 78999999999998887    4444 57999999976542000       


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHH--HHHhCCcc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTL--AMVLGNRE  219 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~--~~~~~~~~  219 (327)
                                   .++...|+.+|...+.+.+.++.++   |++++.++||.+.++..............  ........
T Consensus       174 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  240 (283)
T 3v8b_A          174 -------------TPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQV  240 (283)
T ss_dssp             -------------STTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSC
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcC
Confidence                         1335679999999999999999874   79999999999998864432111110000  00000001


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCC--C-CceEEEecc
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPD--A-KGRYICSSA  257 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~~  257 (327)
                      +.   ....+..++|+|+++++++....  . |..+++.|+
T Consensus       241 p~---~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  278 (283)
T 3v8b_A          241 PI---TDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGG  278 (283)
T ss_dssp             GG---GTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cc---ccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcC
Confidence            11   00257899999999999997543  2 335666554

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.92  E-value=2.6e-24  Score=183.19  Aligned_cols=217  Identities=17%  Similarity=0.075  Sum_probs=151.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++| ++..... ...+..    ..++.++.+|++|++++.++++     
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICAR-DAEACADTATRLSA----YGDCQAIPADLSSEAGARRLAQALGEL  102 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS-CHHHHHHHHHHHTT----SSCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh----cCceEEEEeeCCCHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999 4322221 122221    1268889999999998887765     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCC---ccEEEEeccceeeeecCCCCCc
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGT---VKRFVYTSSGSTVYFSGKDVDM  142 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~---~~~~v~~SS~~v~~~~~~~~~~  142 (327)
                        ++|++|||||....      ..+++. ..+++|+.++.++++++.    +.+.   .++||++||...+...      
T Consensus       103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~------  175 (276)
T 2b4q_A          103 SARLDILVNNAGTSWGAALESYPVSGWE-KVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM------  175 (276)
T ss_dssp             CSCCSEEEECCCCCCCCCTTSCCSHHHH-HHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC------
Confidence              68999999986432      223344 889999999977777654    3331   2799999998765311      


Q ss_pred             ccCCCCCChhHhhhcCCCch-hhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhC-C
Q 020334          143 LDETFWSDEDYIRKLDIWGK-SYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLG-N  217 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~-~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~-~  217 (327)
                                      +... .|+.+|...+.+.+.++.++   |+++++++||.+.++....    ........... .
T Consensus       176 ----------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----~~~~~~~~~~~~~  235 (276)
T 2b4q_A          176 ----------------GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH----IANDPQALEADSA  235 (276)
T ss_dssp             ----------------CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH----HHHCHHHHHHHHH
T ss_pred             ----------------CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh----cchhHHHHHHhhc
Confidence                            1123 69999999999999988764   8999999999998874221    11000011110 0


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ..+.     ..+.+++|+|+++++++..+.   .+..+++.+.
T Consensus       236 ~~p~-----~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  273 (276)
T 2b4q_A          236 SIPM-----GRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGG  273 (276)
T ss_dssp             TSTT-----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCC-----CCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            1111     258899999999999997642   2345666543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.92  E-value=3.5e-24  Score=179.44  Aligned_cols=216  Identities=17%  Similarity=0.132  Sum_probs=155.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++| +.+.........     ..++.++.+|++|++++.++++      
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDI-NAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQALT   78 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS-CHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            3688999999999999999999999999999999 432222221111     2578999999999998887765      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHH----HHhcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKS----CLKSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++||+||....      +.+++. +.+++|+.++.+++++    +++.+...++|++||...+..           
T Consensus        79 g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  146 (247)
T 3rwb_A           79 GGIDILVNNASIVPFVAWDDVDLDHWR-KIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAG-----------  146 (247)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHT-----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccC-----------
Confidence             68999999997542      223344 7899999999998887    444433579999999876531           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .+....|+.+|...+.+.+.++.+   .|++++.++||.+.++..................    +.  
T Consensus       147 -----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~----~~--  209 (247)
T 3rwb_A          147 -----------TPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQ----AM--  209 (247)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHS----SS--
T ss_pred             -----------CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhccc----cc--
Confidence                       133567999999999999998877   4899999999999887432211111111111101    11  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                         ..+..++|+|+++++++....   .+..++++|.
T Consensus       210 ---~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG  243 (247)
T 3rwb_A          210 ---KGKGQPEHIADVVSFLASDDARWITGQTLNVDAG  243 (247)
T ss_dssp             ---CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence               257789999999999997643   2345667654

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.92  E-value=3.3e-24  Score=181.32  Aligned_cols=222  Identities=15%  Similarity=0.063  Sum_probs=148.2

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |...++++|||||+|+||.+++++|+++|++|++++| +......+....     ..++.++.+|++|.+++.++++   
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~   78 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDR-DKAGAERVAGEI-----GDAALAVAADISKEADVDAAVEAAL   78 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHH
Confidence            4445689999999999999999999999999999999 433322222111     2478999999999998887765   


Q ss_pred             ----CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHHhcC-------CccEEEEeccceeeeecCCC
Q 020334           78 ----GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCLKSG-------TVKRFVYTSSGSTVYFSGKD  139 (327)
Q Consensus        78 ----~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-------~~~~~v~~SS~~v~~~~~~~  139 (327)
                          ++|++||+||....       +.+++ ...+++|+.++.++++++.+.-       ...++|++||...+..    
T Consensus        79 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----  153 (261)
T 3n74_A           79 SKFGKVDILVNNAGIGHKPQNAELVEPEEF-DRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRP----  153 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCSCCGGGSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSC----
T ss_pred             HhcCCCCEEEECCccCCCCCCcccCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCC----
Confidence                68999999997541       22233 3789999999888888765431       1347999999765521    


Q ss_pred             CCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhC
Q 020334          140 VDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLG  216 (327)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~  216 (327)
                                        .+....|+.+|...+.+.+.++.++   +++++.++|+.+.++.................. 
T Consensus       154 ------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-  214 (261)
T 3n74_A          154 ------------------RPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFR-  214 (261)
T ss_dssp             ------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------
T ss_pred             ------------------CCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHh-
Confidence                              1234579999999999999998774   899999999999988543221111101111100 


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ...+.     ..+++++|+|+++++++....   .+..+++++.
T Consensus       215 ~~~~~-----~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG  253 (261)
T 3n74_A          215 DSIPM-----GRLLKPDDLAEAAAFLCSPQASMITGVALDVDGG  253 (261)
T ss_dssp             --CTT-----SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hcCCc-----CCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCC
Confidence            11111     368999999999999996533   2446677544

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.92  E-value=5.4e-24  Score=182.52  Aligned_cols=236  Identities=15%  Similarity=0.098  Sum_probs=159.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC--------cchhhhhh-CCCCCCCCeEEEeCCCCChhHHHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH--------KKDLSFLT-NLPGASERLQIFNADLNDPESFDAA   75 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~   75 (327)
                      +|++|||||+|+||.+++++|+++|++|++++|+....        ...+.... .......++.++.+|++|++++.++
T Consensus        10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   89 (287)
T 3pxx_A           10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRE   89 (287)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence            57899999999999999999999999999999942111        11111110 0001135789999999999988877


Q ss_pred             hc-------CCCEEEEccCCCCC----CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcc
Q 020334           76 IA-------GCAGVIHVAAPIDI----DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        76 ~~-------~~d~vih~a~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                      ++       ++|++|||||....    +.+.+. ..+++|+.++.++++++...- ...++|++||...+...  ...+.
T Consensus        90 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--~~~~~  166 (287)
T 3pxx_A           90 LANAVAEFGKLDVVVANAGICPLGAHLPVQAFA-DAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAA--AQPPG  166 (287)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHH-HHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHH--HCCC-
T ss_pred             HHHHHHHcCCCCEEEECCCcCcccCcCCHHHHH-HHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccc--ccccc
Confidence            65       78999999997542    233444 889999999999999998752 24699999998766321  11222


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC----------CchHHHH
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKF----------AGSVRST  210 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~----------~~~~~~~  210 (327)
                      .|..+         .++...|+.+|...+.+.+.++.++   |++++.++||.+.++......          .......
T Consensus       167 ~~~~~---------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T 3pxx_A          167 AGGPQ---------GPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADA  237 (287)
T ss_dssp             ----C---------HHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred             ccccC---------CCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHH
Confidence            22221         1335679999999999999998875   899999999999998643200          0000000


Q ss_pred             HHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          211 LAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ........     .-...+.+++|+|+++++++....   .|..+++.|.
T Consensus       238 ~~~~~~~~-----~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG  282 (287)
T 3pxx_A          238 LLAFPAMQ-----AMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG  282 (287)
T ss_dssp             HHHGGGGC-----SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             Hhhhhhhc-----ccCCCCCCHHHHHhhHheecchhhcCCCCceEeECch
Confidence            00000000     001478999999999999997542   2446677554

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.92  E-value=5e-24  Score=180.65  Aligned_cols=219  Identities=18%  Similarity=0.092  Sum_probs=152.0

Q ss_pred             CCeEEEeCCcc-hhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTG-FIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++++|||||+| .||.+++++|+++|++|++++|+..........+....  ..++.++.+|++|++++.++++      
T Consensus        22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG--LGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC--SSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC--CCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            57899999998 59999999999999999999993322222222332221  2578999999999998887765      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++||+||....      ..+++ ...+++|+.++.++++++...    +...+||++||...+..           
T Consensus       100 g~id~li~~Ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------  167 (266)
T 3o38_A          100 GRLDVLVNNAGLGGQTPVVDMTDEEW-DRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA-----------  167 (266)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC-----------
T ss_pred             CCCcEEEECCCcCCCCCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC-----------
Confidence             67999999996542      12233 378999999999998887654    12578999999775521           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .++...|+.+|...+.+++.++.+   .|++++.++||.+.++.........   ...... ...+.  
T Consensus       168 -----------~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~~~~~-~~~~~--  230 (266)
T 3o38_A          168 -----------QHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSE---LLDRLA-SDEAF--  230 (266)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---------------------CCTT--
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHH---HHHHHH-hcCCc--
Confidence                       133567999999999999998877   4899999999999987533211110   011111 11111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                         ..+.+++|+|+++++++....   .+.+++++++
T Consensus       231 ---~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG  264 (266)
T 3o38_A          231 ---GRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQ  264 (266)
T ss_dssp             ---SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             ---CCCCCHHHHHHHHHHHcCccccCccCCEEEEcCC
Confidence               368899999999999987632   2345667553

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=6e-24  Score=178.05  Aligned_cols=216  Identities=14%  Similarity=0.110  Sum_probs=152.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHh---cCCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAI---AGCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~---~~~d~   81 (327)
                      +|++|||||+|+||++++++|+++|++|++++| ++...   ..+...    .++.++.+|++|++++++++   .++|+
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~---~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~   77 (246)
T 2ag5_A            6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDI-NESKL---QELEKY----PGIQTRVLDVTKKKQIDQFANEVERLDV   77 (246)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHH---GGGGGS----TTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHH---HHHHhc----cCceEEEeeCCCHHHHHHHHHHhCCCCE
Confidence            578999999999999999999999999999999 43222   222211    36889999999999888664   37899


Q ss_pred             EEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCCCCCh
Q 020334           82 VIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDE  151 (327)
Q Consensus        82 vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~  151 (327)
                      +||+||....      ..+++. ..+++|+.++.++++++.+    .+ .+++|++||...+...               
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~-~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~---------------  140 (246)
T 2ag5_A           78 LFNVAGFVHHGTVLDCEEKDWD-FSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKG---------------  140 (246)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBC---------------
T ss_pred             EEECCccCCCCCcccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCC---------------
Confidence            9999996542      122333 7889999999998888653    34 5799999997654211               


Q ss_pred             hHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC--chHHHHHHHHhCCccccccccC
Q 020334          152 DYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFA--GSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       152 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                            ..+...|+.+|...+.+++.++.++   |++++++||+.+++|.......  ............. .+.     
T Consensus       141 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~-----  208 (246)
T 2ag5_A          141 ------VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKR-QKT-----  208 (246)
T ss_dssp             ------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHT-CTT-----
T ss_pred             ------CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhc-CCC-----
Confidence                  0135679999999999999998764   8999999999999984211000  0001111111111 111     


Q ss_pred             CCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          227 ISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ..+..++|+|+++++++....   .+..+++.+.
T Consensus       209 ~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG  242 (246)
T 2ag5_A          209 GRFATAEEIAMLCVYLASDESAYVTGNPVIIDGG  242 (246)
T ss_dssp             SSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            258899999999999997543   2345666554

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.92  E-value=4.6e-24  Score=181.99  Aligned_cols=218  Identities=16%  Similarity=0.137  Sum_probs=146.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++|++.+..... ..+...   ..++.++.+|++|++++.++++      
T Consensus        29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           29 RPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL---GARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT---TCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            467999999999999999999999999999997443322222 222221   3578999999999998887765      


Q ss_pred             -CCCEEEEccCCCC--C------CCCchHHHHHHHHHhHHHHHHHHHHhc----C--CccEEEEeccceeeeecCCCCCc
Q 020334           78 -GCAGVIHVAAPID--I------DGKETEEVMTQRAVNGTIGILKSCLKS----G--TVKRFVYTSSGSTVYFSGKDVDM  142 (327)
Q Consensus        78 -~~d~vih~a~~~~--~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~--~~~~~v~~SS~~v~~~~~~~~~~  142 (327)
                       ++|++||+||...  .      +.+++. ..+++|+.++.++++++.+.    +  ...+||++||...+..       
T Consensus       106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-------  177 (280)
T 4da9_A          106 GRIDCLVNNAGIASIVRDDFLDLKPENFD-TIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMT-------  177 (280)
T ss_dssp             SCCCEEEEECC------CCGGGCCHHHHH-HHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------------
T ss_pred             CCCCEEEECCCccccCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccC-------
Confidence             7899999999732  1      223344 78889999998888876643    1  1358999999876531       


Q ss_pred             ccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcc
Q 020334          143 LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNRE  219 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (327)
                                     .++...|+.+|...+.+.+.++.+   .|++++.++||.+.++.........    .........
T Consensus       178 ---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~----~~~~~~~~~  238 (280)
T 4da9_A          178 ---------------SPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKY----DGLIESGLV  238 (280)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------
T ss_pred             ---------------CCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhH----HHHHhhcCC
Confidence                           133467999999999999999877   4899999999999988543211111    111111011


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      +.     ..+..++|+|+++++++....   .+..++++|.
T Consensus       239 p~-----~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  274 (280)
T 4da9_A          239 PM-----RRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGG  274 (280)
T ss_dssp             --------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTT
T ss_pred             Cc-----CCcCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            12     268899999999999997654   2446677554

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.92  E-value=5.8e-24  Score=179.84  Aligned_cols=210  Identities=16%  Similarity=0.108  Sum_probs=151.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|+||||||+|+||++++++|+++|++|++++| ++..             ..++.++.+|++|++++.++++       
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   73 (264)
T 2dtx_A            8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSI-HDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKEYG   73 (264)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-SCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEec-Cccc-------------CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999 4322             1467899999999998887765       


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      ++|++||+||....      +.+++. ..+++|+.++.++++++.+.   ...++||++||...+..             
T Consensus        74 ~iD~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  139 (264)
T 2dtx_A           74 SISVLVNNAGIESYGKIESMSMGEWR-RIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII-------------  139 (264)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHH-HHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSC-------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccC-------------
Confidence            68999999986542      222343 78999999988888877643   12579999999876531             


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcC--CcEEEEecCceecCCCCCCC------Cch-HHHHHHHHhCCcc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG--LDLVTLIPSFVVGPFICPKF------AGS-VRSTLAMVLGNRE  219 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~i~R~~~v~G~~~~~~~------~~~-~~~~~~~~~~~~~  219 (327)
                               .++...|+.+|...+.+.+.++.+++  +++++++||.+.++......      ... ......... ...
T Consensus       140 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  209 (264)
T 2dtx_A          140 ---------TKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWG-HEH  209 (264)
T ss_dssp             ---------CTTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHH-HHS
T ss_pred             ---------CCCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHH-hcC
Confidence                     13356799999999999999988765  99999999999876311100      000 000001000 001


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      +     ...+++++|+|+++++++....   .+..+++.+.
T Consensus       210 p-----~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  245 (264)
T 2dtx_A          210 P-----MQRIGKPQEVASAVAFLASREASFITGTCLYVDGG  245 (264)
T ss_dssp             T-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C-----CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence            1     1368999999999999987642   2445667554

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.92  E-value=4.1e-24  Score=181.65  Aligned_cols=220  Identities=18%  Similarity=0.124  Sum_probs=154.8

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhh-hhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSF-LTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |...+|+||||||+|+||.+++++|+++|++|++++|++......+.. +...   ..++.++.+|++|.+++.++++  
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~  101 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK---GYKAAVIKFDAASESDFIEAIQTI  101 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCceEEEECCCCCHHHHHHHHHHH
Confidence            334467899999999999999999999999999999944332222222 2111   2578999999999998887765  


Q ss_pred             -----CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCc
Q 020334           78 -----GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDM  142 (327)
Q Consensus        78 -----~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~  142 (327)
                           ++|++||+||.....      .+++ .+.+++|+.++.++++++.+    .+ ..++|++||...+..       
T Consensus       102 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-------  172 (271)
T 4iin_A          102 VQSDGGLSYLVNNAGVVRDKLAIKMKTEDF-HHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGERG-------  172 (271)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC-------
T ss_pred             HHhcCCCCEEEECCCcCCCcccccCCHHHH-HHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcCC-------
Confidence                 689999999975422      2233 47899999999888777654    34 579999999776521       


Q ss_pred             ccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcc
Q 020334          143 LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNRE  219 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (327)
                                     .++...|+.+|...+.+++.++.+   .+++++.++||.+.++........    ... ......
T Consensus       173 ---------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----~~~-~~~~~~  232 (271)
T 4iin_A          173 ---------------NMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE----LKA-DYVKNI  232 (271)
T ss_dssp             ---------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-----------------CGGGC
T ss_pred             ---------------CCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH----HHH-HHHhcC
Confidence                           133567999999999999998877   489999999999988753221100    000 000111


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      +.     ..+..++|+|+++++++....   .|..++++|+
T Consensus       233 ~~-----~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG  268 (271)
T 4iin_A          233 PL-----NRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGG  268 (271)
T ss_dssp             TT-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             Cc-----CCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCC
Confidence            11     368899999999999997643   2446667554

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.92  E-value=5.6e-24  Score=179.70  Aligned_cols=222  Identities=14%  Similarity=0.136  Sum_probs=151.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC-cchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH-KKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++| ++.. .... ..+....  ..++.++.+|++|++++.++++    
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~   79 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGF-GDAAEIEKVRAGLAAQH--GVKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECC-SCHHHHHHHHHHHHHHH--TSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeC-CcchHHHHHHHHHHhcc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999 4322 2211 1111100  1367889999999998887765    


Q ss_pred             ---CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 ---GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 ---~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                         ++|++||+||....      ..+++ ...+++|+.++.++++++.+    .+ .++||++||...+..         
T Consensus        80 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~---------  148 (260)
T 1x1t_A           80 QMGRIDILVNNAGIQHTALIEDFPTEKW-DAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVA---------  148 (260)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC---------
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcC---------
Confidence               68999999986542      22233 37899999999888887753    34 579999999876531         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHH-------HHHHHH
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVR-------STLAMV  214 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~-------~~~~~~  214 (327)
                                   .++...|+.+|...+.+.+.++.++   |+++++++||.+.+|...........       ......
T Consensus       149 -------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  215 (260)
T 1x1t_A          149 -------------SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAAREL  215 (260)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------C
T ss_pred             -------------CCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHH
Confidence                         1235679999999999999988765   89999999999999864321110000       000000


Q ss_pred             hCCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          215 LGNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       215 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .....+     ...+.+++|+|+++++++....   .+..+++.+.
T Consensus       216 ~~~~~p-----~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG  256 (260)
T 1x1t_A          216 LSEKQP-----SLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             HHHHCT-----TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhccCC-----CCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence            000001     1368999999999999997532   2446667554

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.92  E-value=3.3e-24  Score=182.89  Aligned_cols=219  Identities=15%  Similarity=0.124  Sum_probs=155.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| +..... ....+...   ..++.++.+|++|++++.++++      
T Consensus        24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCAR-DAKNVSAAVDGLRAA---GHDVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHTT---TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999 433222 22223222   3578999999999998877665      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh------cCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK------SGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~------~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                       ++|++||+||....      +.+++. ..+++|+.++.++++++.+      .+ ..+||++||...+..         
T Consensus       100 g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~---------  168 (279)
T 3sju_A          100 GPIGILVNSAGRNGGGETADLDDALWA-DVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQG---------  168 (279)
T ss_dssp             CSCCEEEECCCCCCCSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSC---------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccC---------
Confidence             68999999997542      222333 7789999999999998755      33 579999999876521         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCC-------CCchHHHHHHHH
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPK-------FAGSVRSTLAMV  214 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~-------~~~~~~~~~~~~  214 (327)
                                   .++...|+.+|...+.+.+.++.+   .|++++.++||.+.+|.....       ............
T Consensus       169 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  235 (279)
T 3sju_A          169 -------------VMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERF  235 (279)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHH
T ss_pred             -------------CCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHH
Confidence                         133567999999999999999877   489999999999988632110       000011111111


Q ss_pred             hCCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          215 LGNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       215 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      . ...+.     ..+..++|+|+++++++....   .|..++++|+
T Consensus       236 ~-~~~p~-----~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  275 (279)
T 3sju_A          236 N-AKIPL-----GRYSTPEEVAGLVGYLVTDAAASITAQALNVCGG  275 (279)
T ss_dssp             H-TTCTT-----SSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTT
T ss_pred             H-hcCCC-----CCCCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            1 11122     268899999999999997643   2446677654

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.92  E-value=3e-24  Score=184.15  Aligned_cols=219  Identities=13%  Similarity=0.103  Sum_probs=157.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|++|||||+|+||++++++|+++|++|++++|+..............  ...++.++.+|++|++++.++++       
T Consensus        47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  124 (291)
T 3ijr_A           47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK--EGVKCVLLPGDLSDEQHCKDIVQETVRQLG  124 (291)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT--TTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh--cCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999433222222222111  13578999999999998887765       


Q ss_pred             CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           78 GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        78 ~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                      ++|++||+||....       +.+++. ..+++|+.++.++++++.+.- ...+||++||...+..              
T Consensus       125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~--------------  189 (291)
T 3ijr_A          125 SLNILVNNVAQQYPQQGLEYITAEQLE-KTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEG--------------  189 (291)
T ss_dssp             SCCEEEECCCCCCCCSSGGGCCHHHHH-HHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHC--------------
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCC--------------
Confidence            68999999986532       223344 889999999999999998752 2459999999877631              


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                              .+....|+.+|...+.+.+.++.++   |++++.++||.|++|........   ..... .....+.     
T Consensus       190 --------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---~~~~~-~~~~~p~-----  252 (291)
T 3ijr_A          190 --------NETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDE---KKVSQ-FGSNVPM-----  252 (291)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCH---HHHHH-TTTTSTT-----
T ss_pred             --------CCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCH---HHHHH-HHccCCC-----
Confidence                    1234679999999999999998775   89999999999998842111110   01111 1111222     


Q ss_pred             CCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          227 ISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ..+.+++|+|+++++++....   .+..++++|.
T Consensus       253 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  286 (291)
T 3ijr_A          253 QRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGG  286 (291)
T ss_dssp             SSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             CCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCC
Confidence            368899999999999997643   2346667554

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.92  E-value=1.5e-23  Score=175.47  Aligned_cols=215  Identities=18%  Similarity=0.161  Sum_probs=153.1

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |...+|++|||||+|+||.+++++|+++|++|++++| ++..   +..+...    .++.++.+|++|++++.++++   
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r-~~~~---~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~   72 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDI-EEGP---LREAAEA----VGAHPVVMDVADPASVERGFAEAL   72 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHT----TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHH----cCCEEEEecCCCHHHHHHHHHHHH
Confidence            5555789999999999999999999999999999999 4322   2222111    137889999999998887665   


Q ss_pred             ----CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCccc
Q 020334           78 ----GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 ----~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                          ++|++|||||.....      .+++. +.+++|+.++.++++++.+.   ...++||++||.. +. +        
T Consensus        73 ~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~-~--------  141 (245)
T 1uls_A           73 AHLGRLDGVVHYAGITRDNFHWKMPLEDWE-LVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YL-G--------  141 (245)
T ss_dssp             HHHSSCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GG-C--------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hc-C--------
Confidence                589999999965421      22333 78999999999998877653   1267999999987 32 1        


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .+....|+.+|...+.+.+.++.++   |+++++++||.+.++.... .....   ...... ..+.
T Consensus       142 -------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~---~~~~~~-~~p~  203 (245)
T 1uls_A          142 -------------NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VPEKV---REKAIA-ATPL  203 (245)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-SCHHH---HHHHHH-TCTT
T ss_pred             -------------CCCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh-cCHHH---HHHHHh-hCCC
Confidence                         1224579999999999999888764   8999999999998875332 11111   111111 1111


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC--C-CceEEEecc
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD--A-KGRYICSSA  257 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~~  257 (327)
                           ..+++++|+|+++++++....  . +..+.+.|.
T Consensus       204 -----~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  237 (245)
T 1uls_A          204 -----GRAGKPLEVAYAALFLLSDESSFITGQVLFVDGG  237 (245)
T ss_dssp             -----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence                 158899999999999987542  2 335566554

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.92  E-value=1.9e-24  Score=183.39  Aligned_cols=215  Identities=15%  Similarity=0.123  Sum_probs=154.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| +......+ ..+...   ..++.++.+|++|++++.++++      
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           28 KQVAIVTGASRGIGRAIALELARRGAMVIGTAT-TEAGAEGIGAAFKQA---GLEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHHH---TCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999 43322222 222111   2467899999999998887765      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++|||||....      +.+++. ..+++|+.++.++++++.+    .+ ..+||++||...+..           
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-----------  170 (270)
T 3ftp_A          104 GALNVLVNNAGITQDQLAMRMKDDEWD-AVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAG-----------  170 (270)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC-----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCC-----------
Confidence             68999999986542      223343 7899999999999887753    33 578999999876531           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .++...|+.+|...+.+.+.++.++   |+++++++||.+.++..... ..   ....... ...+.  
T Consensus       171 -----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~---~~~~~~~-~~~p~--  232 (270)
T 3ftp_A          171 -----------NPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL-PQ---EQQTALK-TQIPL--  232 (270)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS-CH---HHHHHHH-TTCTT--
T ss_pred             -----------CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc-CH---HHHHHHH-hcCCC--
Confidence                       1335679999999999999988774   89999999999988742211 11   1111111 11122  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                         ..+.+++|+|+++++++....   .+..+++++.
T Consensus       233 ---~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  266 (270)
T 3ftp_A          233 ---GRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGG  266 (270)
T ss_dssp             ---CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCCCHHHHHHHHHHHhCCCcCCccCcEEEECCC
Confidence               268899999999999986433   2446777654

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.92  E-value=1.7e-23  Score=177.56  Aligned_cols=218  Identities=16%  Similarity=0.082  Sum_probs=157.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++++.......+ ..+...   ..++.++.+|++|+++++++++     
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA---GGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999988443322222 222221   3578899999999998887765     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                        ++|++||+||....      +.+++. +.+++|+.++..+++++.+.- ...++|++||.......            
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~------------  173 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHSAPLEETTVADFD-EVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVP------------  173 (271)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCC------------
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCC------------
Confidence              78999999987542      223344 889999999999999988651 24699999986432100            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                               .++...|+.+|...+.+.+.++.++   |++++.++||.+.++..... ........   ..  .+.    
T Consensus       174 ---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~~~~~~~---~~--~~~----  234 (271)
T 3v2g_A          174 ---------WPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPAD-GDHAEAQR---ER--IAT----  234 (271)
T ss_dssp             ---------STTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSS-CSSHHHHH---HT--CTT----
T ss_pred             ---------CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCccccc-chhHHHHH---hc--CCC----
Confidence                     1335679999999999999998775   89999999999999865432 22221111   11  111    


Q ss_pred             CCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          226 NISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                       ..+..++|+|+++++++....   .|..+++.|.
T Consensus       235 -~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  268 (271)
T 3v2g_A          235 -GSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGG  268 (271)
T ss_dssp             -SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcC
Confidence             257899999999999986532   2346667554

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.92  E-value=2.3e-24  Score=181.68  Aligned_cols=221  Identities=16%  Similarity=0.148  Sum_probs=151.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      |+|++|||||+|+||.+++++|+++|++|++++| ++...... ..+...   ..++.++.+|++|++++.++++     
T Consensus         1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~   76 (256)
T 1geg_A            1 MKKVALVTGAGQGIGKAIALRLVKDGFAVAIADY-NDATAKAVASEINQA---GGHAVAVKVDVSDRDQVFAAVEQARKT   76 (256)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999 43322221 222211   2468899999999998888775     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||....      +.+++. ..+++|+.++..+++++.+.    +..+++|++||...+. +         
T Consensus        77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~---------  145 (256)
T 1geg_A           77 LGGFDVIVNNAGVAPSTPIESITPEIVD-KVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV-G---------  145 (256)
T ss_dssp             TTCCCEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-C---------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC-C---------
Confidence              78999999986432      122333 78999999998887776543    2136999999976542 1         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCch-------HHHHHHHHh
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGS-------VRSTLAMVL  215 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~-------~~~~~~~~~  215 (327)
                                  .+....|+.+|...+.+.+.++.++   |+++++++||.+.+|.........       .........
T Consensus       146 ------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (256)
T 1geg_A          146 ------------NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFA  213 (256)
T ss_dssp             ------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHH
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHH
Confidence                        1224579999999999999988764   899999999999887421100000       000001111


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      . ..+.     ..+.+++|+|+++++++....   .+..+.+.+.
T Consensus       214 ~-~~p~-----~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  252 (256)
T 1geg_A          214 K-RITL-----GRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG  252 (256)
T ss_dssp             T-TCTT-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             h-cCCC-----CCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            1 1111     258999999999999997642   2335666543

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.92  E-value=2.3e-23  Score=175.26  Aligned_cols=211  Identities=15%  Similarity=0.079  Sum_probs=150.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| +++......  ...   ..++.++.+|++|++++.++++       
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (254)
T 1hdc_A            5 GKTVIITGGARGLGAEAARQAVAAGARVVLADV-LDEEGAATA--REL---GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHh---CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            688999999999999999999999999999999 432222111  111   2367889999999998887775       


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHH----HHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIG----ILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~----l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|++||+||....      +.+++. ..+++|+.++..    ++..+++.+ .++||++||...+..            
T Consensus        79 ~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~------------  144 (254)
T 1hdc_A           79 SVDGLVNNAGISTGMFLETESVERFR-KVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMG------------  144 (254)
T ss_dssp             CCCEEEECCCCCCCSCGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccC------------
Confidence            79999999986542      122333 789999999874    455555555 689999999876531            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc-ccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR-EEYSI  223 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~  223 (327)
                                .++...|+.+|...+.+.+.++.++   |++++++||+.+++|....            ..... ..+..
T Consensus       145 ----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------~~~~~~~~~~~  202 (254)
T 1hdc_A          145 ----------LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE------------TGIRQGEGNYP  202 (254)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH------------HTCCCSTTSCT
T ss_pred             ----------CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccc------------cchhHHHHHHh
Confidence                      1235679999999999999988764   8999999999999874210            00000 00000


Q ss_pred             -ccCCCee-eHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          224 -LLNISMV-HIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       224 -~~~~~~i-~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                       .....+. +++|+|+++++++....   .+..+++.+.
T Consensus       203 ~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  241 (254)
T 1hdc_A          203 NTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG  241 (254)
T ss_dssp             TSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence             0012477 99999999999987642   2345667554

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.92  E-value=1.6e-23  Score=177.55  Aligned_cols=211  Identities=15%  Similarity=0.121  Sum_probs=153.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+|+||||||+|+||.+++++|+++|++|++++| +....            ...+.++.+|++|++++.++++      
T Consensus        13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (269)
T 3vtz_A           13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSL-DEKSD------------VNVSDHFKIDVTNEEEVKEAVEKTTKKY   79 (269)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CC--C------------TTSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-Cchhc------------cCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999 43222            1356788999999998887765      


Q ss_pred             -CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++||+||.....      .+.+ ...+++|+.++..+++++..    .+ ..+||++||...+..           
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-----------  146 (269)
T 3vtz_A           80 GRIDILVNNAGIEQYSPLHLTPTEIW-RRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAA-----------  146 (269)
T ss_dssp             SCCCEEEECCCCCCCCCGGGSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSB-----------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccC-----------
Confidence             789999999975422      1223 37789999999888887654    34 579999999877631           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCC-------CCchHHHHHHHHhCC
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPK-------FAGSVRSTLAMVLGN  217 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~-------~~~~~~~~~~~~~~~  217 (327)
                                 .+....|+.||...+.+.+.++.++  +++++.++||.+.++.....       ............. .
T Consensus       147 -----------~~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~  214 (269)
T 3vtz_A          147 -----------TKNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWG-R  214 (269)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHH-H
T ss_pred             -----------CCCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHH-h
Confidence                       1335679999999999999999887  89999999999998742110       0000111111111 0


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ..+.     ..+.+++|+|+++++++....   .+..++++|.
T Consensus       215 ~~p~-----~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  252 (269)
T 3vtz_A          215 QHPM-----GRIGRPEEVAEVVAFLASDRSSFITGACLTVDGG  252 (269)
T ss_dssp             HSTT-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCC-----CCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCC
Confidence            1111     368899999999999997543   2446777654

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.92  E-value=2.2e-24  Score=182.58  Aligned_cols=220  Identities=16%  Similarity=0.160  Sum_probs=155.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| +.+.... ...+...   ..++.++.+|++|++++.++++      
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A           11 DKVVVISGVGPALGTTLARRCAEQGADLVLAAR-TVERLEDVAKQVTDT---GRRALSVGTDITDDAQVAHLVDETMKAY   86 (264)
T ss_dssp             TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC-CHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999 4332222 2222221   3578999999999998887765      


Q ss_pred             -CCCEEEEccCCCC-------CCCCchHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 -GCAGVIHVAAPID-------IDGKETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 -~~d~vih~a~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                       ++|++||+||...       .+.+++. ..+++|+.++.++++++.+.-  +..++|++||...+..            
T Consensus        87 g~id~lv~nAg~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------  153 (264)
T 3ucx_A           87 GRVDVVINNAFRVPSMKPFANTTFEHMR-DAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHS------------  153 (264)
T ss_dssp             SCCSEEEECCCSCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCC------------
T ss_pred             CCCcEEEECCCCCCCCCCchhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccC------------
Confidence             6899999998642       1123344 789999999999998875431  0259999999876521            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC-------chHHHHHHHHhCC
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFA-------GSVRSTLAMVLGN  217 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~-------~~~~~~~~~~~~~  217 (327)
                                .++...|+.+|...+.+.+.++.+   .|++++.++||.+++|.......       ........... .
T Consensus       154 ----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~  222 (264)
T 3ucx_A          154 ----------QAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAA-A  222 (264)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHH-T
T ss_pred             ----------CCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHh-c
Confidence                      133567999999999999998877   48999999999999874221000       00011111111 1


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ..+.     ..+.+++|+|+++++++....   .+..+++++.
T Consensus       223 ~~p~-----~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  260 (264)
T 3ucx_A          223 GSDL-----KRLPTEDEVASAILFMASDLASGITGQALDVNCG  260 (264)
T ss_dssp             TSSS-----SSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCc-----ccCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            1111     368899999999999997543   2446677654

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.92  E-value=4.7e-24  Score=179.83  Aligned_cols=217  Identities=14%  Similarity=0.160  Sum_probs=154.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|+||||||+|+||.+++++|+++|++|+++++++...... ...+...   ..++.++.+|++|.+++.++++     
T Consensus        12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A           12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL---GFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            368999999999999999999999999999988534433322 2222222   2578999999999998887765     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||....      ..+++ ...+++|+.++.++++++    ++.+ ..+||++||...+..          
T Consensus        89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~----------  156 (256)
T 3ezl_A           89 VGEIDVLVNNAGITRDVVFRKMTREDW-QAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKG----------  156 (256)
T ss_dssp             TCCEEEEEECCCCCCCCCTTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGGS----------
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhccC----------
Confidence              68999999987542      12233 378999999987776665    4444 579999999776521          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .++...|+.+|...+.+++.++.+   .|+++++++||.+.++......+.....+.   ...  +. 
T Consensus       157 ------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~---~~~--~~-  218 (256)
T 3ezl_A          157 ------------QFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIV---ATI--PV-  218 (256)
T ss_dssp             ------------CSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHH---HHS--TT-
T ss_pred             ------------CCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHH---hcC--CC-
Confidence                        133568999999999999998876   389999999999988753321111111111   111  11 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                          ..+..++|+|+++++++....   .+..++++|+
T Consensus       219 ----~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG  252 (256)
T 3ezl_A          219 ----RRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG  252 (256)
T ss_dssp             ----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----CCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCC
Confidence                268899999999999986532   2446677554

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.92  E-value=1.4e-23  Score=176.20  Aligned_cols=206  Identities=19%  Similarity=0.161  Sum_probs=148.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++|+||||||+|+||++++++|+++|++|++++| +++..             ..+.++.+|++|+++++++++      
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~-------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYR-SGEPP-------------EGFLAVKCDITDTEQVEQAYKEIEETH   85 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SSCCC-------------TTSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-ChHhh-------------ccceEEEecCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999 43221             236889999999998877765      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++||+||....      +.+++. ..+++|+.++.++++++.+    .+ .++||++||...+..           
T Consensus        86 g~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~-----------  152 (253)
T 2nm0_A           86 GPVEVLIANAGVTKDQLLMRMSEEDFT-SVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLG-----------  152 (253)
T ss_dssp             CSCSEEEEECSCCTTTC---CCTTTTH-HHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCC-----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCC-----------
Confidence             47999999986432      334555 8899999999998886654    34 579999999765521           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .++...|+.+|...+.+.+.++.++   ++++++++|+.+.++..........    ..... ..+.  
T Consensus       153 -----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~----~~~~~-~~p~--  214 (253)
T 2nm0_A          153 -----------SAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQR----ANIVS-QVPL--  214 (253)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CH----HHHHT-TCTT--
T ss_pred             -----------CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHH----HHHHh-cCCC--
Confidence                       0224579999999999999988774   7999999999998775321100111    11111 1111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                         ..++.++|+|+++++++..+.  ..| .+.+.|.
T Consensus       215 ---~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG  248 (253)
T 2nm0_A          215 ---GRYARPEEIAATVRFLASDDASYITGAVIPVDGG  248 (253)
T ss_dssp             ---CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCcCHHHHHHHHHHHhCccccCCcCcEEEECCc
Confidence               258899999999999997643  234 5566544

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=3.6e-24  Score=182.10  Aligned_cols=197  Identities=14%  Similarity=0.080  Sum_probs=146.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+++||||||+|+||.+++++|+++|++|++++| ++..... ...+...   ..++.++.+|++|++++.++++     
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDI-NKHGLEETAAKCKGL---GAKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEc-CHHHHHHHHHHHHhc---CCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999 4322222 1222211   2478999999999998877765     


Q ss_pred             --CCCEEEEccCCCCCCC-----CchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 --GCAGVIHVAAPIDIDG-----KETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 --~~d~vih~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                        ++|+||||||......     .+.....+++|+.++.++++++.    +.+ .++||++||...+..           
T Consensus       106 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~-----------  173 (272)
T 1yb1_A          106 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVS-----------  173 (272)
T ss_dssp             TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCC-----------
T ss_pred             CCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCC-----------
Confidence              6899999999754221     11223789999999877776654    344 689999999877631           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc------CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH------GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                 .++...|+.+|...+.+++.++.++      |++++++||+.+.++....   . .           ..
T Consensus       174 -----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~---~-~-----------~~  227 (272)
T 1yb1_A          174 -----------VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN---P-S-----------TS  227 (272)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC---T-H-----------HH
T ss_pred             -----------CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc---c-c-----------cc
Confidence                       1224579999999999999988764      7999999999999885321   0 0           00


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                      .     ..+++++|+|++++.++..+.
T Consensus       228 ~-----~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          228 L-----GPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             H-----CCCCCHHHHHHHHHHHHHTTC
T ss_pred             c-----cCCCCHHHHHHHHHHHHHcCC
Confidence            1     257899999999999998754

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=1.6e-24  Score=183.78  Aligned_cols=226  Identities=15%  Similarity=0.061  Sum_probs=151.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++++|||||+|+||++++++|+++|++|++++| ++..... ...+.... ...++.++.+|++|++++.++++      
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDW-NLEAGVQCKAALHEQF-EPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHTTTS-CGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhhc-CCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999999 4322211 11221110 02368899999999998887765      


Q ss_pred             -CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHH----HHHHHHhcC--CccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           78 -GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIG----ILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        78 -~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~----l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                       ++|++||+||...  .+++. +.+++|+.++..    +++.+++.+  ..++||++||...+..               
T Consensus        85 g~id~lv~~Ag~~~--~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------  146 (267)
T 2gdz_A           85 GRLDILVNNAGVNN--EKNWE-KTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP---------------  146 (267)
T ss_dssp             SCCCEEEECCCCCC--SSSHH-HHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC---------------
T ss_pred             CCCCEEEECCCCCC--hhhHH-HHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCC---------------
Confidence             5799999999753  34555 889999986554    455555432  1479999999876531               


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHH--H---HcCCcEEEEecCceecCCCCCCCCch-HHH---HHHHHhCCcccc
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFA--E---EHGLDLVTLIPSFVVGPFICPKFAGS-VRS---TLAMVLGNREEY  221 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~--~---~~~~~~~i~R~~~v~G~~~~~~~~~~-~~~---~~~~~~~~~~~~  221 (327)
                             .++...|+.+|...+.+++.++  .   ..|+++++++||.+.++......... ...   ...... .+  .
T Consensus       147 -------~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~--~  216 (267)
T 2gdz_A          147 -------VAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIK-DM--I  216 (267)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHH-HH--H
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHH-HH--h
Confidence                   1224579999999999988742  2   24899999999999887421100000 000   000000 00  0


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCCC-CceEEEec-cccCHHH
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPDA-KGRYICSS-AKLTIQE  263 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~y~~~~-~~~s~~e  263 (327)
                         ....+++++|+|+++++++..... +.++++++ +..++.|
T Consensus       217 ---~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          217 ---KYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             ---HHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             ---ccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccC
Confidence               012578999999999999987544 44677654 4555544

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.92  E-value=8.6e-24  Score=178.98  Aligned_cols=219  Identities=16%  Similarity=0.159  Sum_probs=152.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhh-hhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSF-LTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++.++++......+.. +...   ..++.++.+|++|+++++++++     
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA---GGKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999886644433332221 2211   2578899999999998887765     


Q ss_pred             --CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 --GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 --~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                        ++|++|||||.....      .+.+. ..+++|+.++.++++++.+.- ...++|++||...+..             
T Consensus       103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  168 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPLTTIAETGDAVFD-RVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLL-------------  168 (267)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHH-HHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHC-------------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccC-------------
Confidence              689999999975421      12233 778899999999998887642 1359999999776521             


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                               .+....|+.+|...+.+.+.++.++   |++++.++||.+..+..........   ..... ...+.    
T Consensus       169 ---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~~-~~~p~----  231 (267)
T 3u5t_A          169 ---------HPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEV---RDRFA-KLAPL----  231 (267)
T ss_dssp             ---------CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------C---HHHHH-TSSTT----
T ss_pred             ---------CCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHH---HHHHH-hcCCC----
Confidence                     1334679999999999999999875   8999999999998875322111111   11111 11111    


Q ss_pred             CCCeeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 020334          226 NISMVHIDDVARAHIFLLEYPDA--KG-RYICSSA  257 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~~  257 (327)
                       ..+..++|+|+++++++.....  .| .+++.|.
T Consensus       232 -~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          232 -ERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             -CSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred             -CCCcCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence             2688999999999999976432  34 5566554

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.92  E-value=1.7e-23  Score=177.42  Aligned_cols=216  Identities=15%  Similarity=0.151  Sum_probs=155.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      |+++||||||+|+||.+++++|+++|++|+++.+++...... ...+...   ..++.++.+|++|++++.++++     
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN---GGNGRLLSFDVANREQCREVLEHEIAQ  101 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999998877634322222 2222221   3578999999999998887765     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH-----hcCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL-----KSGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~-----~~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        ++|++||+||....      ..+++. ..+++|+.++.++++.+.     +.+ ..+||++||...+..         
T Consensus       102 ~g~id~li~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~~-~g~iv~isS~~~~~~---------  170 (267)
T 4iiu_A          102 HGAWYGVVSNAGIARDAAFPALSNDDWD-AVIHTNLDSFYNVIQPCIMPMIGARQ-GGRIITLSSVSGVMG---------  170 (267)
T ss_dssp             HCCCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTS-CEEEEEECCHHHHHC---------
T ss_pred             hCCccEEEECCCCCCCCccccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEEcchHhccC---------
Confidence              78999999997542      222333 789999999999988763     233 579999999776531         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .++...|+.+|...+.+.+.++.++   |+++++++||.+.++..... ...   ........  +.
T Consensus       171 -------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~---~~~~~~~~--p~  231 (267)
T 4iiu_A          171 -------------NRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME-ESA---LKEAMSMI--PM  231 (267)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC-HHH---HHHHHHTC--TT
T ss_pred             -------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc-HHH---HHHHHhcC--CC
Confidence                         1335679999999999998888765   89999999999999864321 111   11111111  11


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                           ..+..++|+|+++++++....   .+.+++++|+
T Consensus       232 -----~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          232 -----KRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             -----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence                 258899999999999997532   2446677654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.92  E-value=8.1e-24  Score=177.74  Aligned_cols=207  Identities=14%  Similarity=0.081  Sum_probs=141.4

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      ..++++|||||+|+||.+++++|+++|++|++++| +...... ...+...   ..++.++.+|++|++++.++++    
T Consensus         5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRR-NGEKLAPLVAEIEAA---GGRIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEES-SGGGGHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCeEEEEECcCCCHHHHHHHHHHHHh
Confidence            34688999999999999999999999999999999 4433322 2223222   3578999999999999888775    


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||....      +.+++. ..+++|+.++..+++++.    +.+ ..+||++||...+..          
T Consensus        81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----------  148 (252)
T 3h7a_A           81 HAPLEVTIFNVGANVNFPILETTDRVFR-KVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRG----------  148 (252)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCC----------
T ss_pred             hCCceEEEECCCcCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCC----------
Confidence              67999999997542      222333 789999999988888764    344 579999999875521          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcE-EEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDL-VTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~-~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                  .+....|+.||...+.+.+.++.++   |+++ +++.||.+..+..........    ....      
T Consensus       149 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~----~~~~------  206 (252)
T 3h7a_A          149 ------------GSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMF----GKDA------  206 (252)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------
T ss_pred             ------------CCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhh----hhhh------
Confidence                        1235679999999999999988775   7999 899999998875332111110    0000      


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCCC
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPDA  248 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~~  248 (327)
                       ......+..++|+|+++++++..+..
T Consensus       207 -~~~~~~~~~pedvA~~~~~l~s~~~~  232 (252)
T 3h7a_A          207 -LANPDLLMPPAAVAGAYWQLYQQPKS  232 (252)
T ss_dssp             --------CCHHHHHHHHHHHHHCCGG
T ss_pred             -hcCCccCCCHHHHHHHHHHHHhCchh
Confidence             00011288999999999999987643

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.92  E-value=1.2e-23  Score=178.99  Aligned_cols=219  Identities=13%  Similarity=0.169  Sum_probs=157.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++| +.+....+ ..+...   ..++.++.+|++|+++++++++     
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAAR-HSDALQVVADEIAGV---GGKALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-SGGGGHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999 44333222 222221   3478999999999999888775     


Q ss_pred             --CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||.....      .+++. ..+++|+.++..+++++.+.    +...++|++||...+....        
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~--------  177 (276)
T 3r1i_A          107 LGGIDIAVCNAGIVSVQAMLDMPLEEFQ-RIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI--------  177 (276)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC--------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC--------
Confidence              789999999975422      22333 77899999999988877643    2136899999976542110        


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  ..+...|+.||...+.+.+.++.+   .+++++.++||.|.++..... ...    ..... ...+. 
T Consensus       178 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~~----~~~~~-~~~p~-  238 (276)
T 3r1i_A          178 ------------PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL-ADY----HALWE-PKIPL-  238 (276)
T ss_dssp             ------------SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG-GGG----HHHHG-GGSTT-
T ss_pred             ------------CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc-hHH----HHHHH-hcCCC-
Confidence                        123467999999999999999887   489999999999998854321 111    11111 11122 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEeccc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSAK  258 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~~  258 (327)
                          ..+..++|+|+++++++....   .+.++++.|..
T Consensus       239 ----~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  273 (276)
T 3r1i_A          239 ----GRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGY  273 (276)
T ss_dssp             ----SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             ----CCCcCHHHHHHHHHHHcCccccCccCcEEEECcCc
Confidence                258899999999999997543   24466776543

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.92  E-value=8.6e-24  Score=178.38  Aligned_cols=219  Identities=16%  Similarity=0.136  Sum_probs=153.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC--cch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH--KKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| ++..  ... ...+...   ..++.++.+|++|++++.++++    
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADL-PQQEEQAAETIKLIEAA---DQKAVFVGLDVTDKANFDSAIDEAAE   77 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC-GGGHHHHHHHHHHHHTT---TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CcchHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999 4332  111 1222221   2478899999999998887765    


Q ss_pred             ---CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCc-cEEEEeccceeeeecCCCCCcc
Q 020334           78 ---GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS----GTV-KRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ---~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~-~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                         ++|++||+||....      +.+++. ..+++|+.++.++++++.+.    + . ++||++||...+..        
T Consensus        78 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~--------  147 (258)
T 3a28_C           78 KLGGFDVLVNNAGIAQIKPLLEVTEEDLK-QIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAIQG--------  147 (258)
T ss_dssp             HHTCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGTSC--------
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhccC--------
Confidence               78999999996542      122333 78999999999988887653    4 4 79999999876521        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC-------chHHHHHHH
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFA-------GSVRSTLAM  213 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~-------~~~~~~~~~  213 (327)
                                    .++...|+.+|...+.+.+.++.++   |+++++++||.+.++.......       .........
T Consensus       148 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  213 (258)
T 3a28_C          148 --------------FPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKE  213 (258)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHH
T ss_pred             --------------CCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHH
Confidence                          1235679999999999999988764   8999999999998763110000       000000011


Q ss_pred             HhCCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          214 VLGNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       214 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ... ..+.     ..+.+++|+|+++++++....   .+..+++.|.
T Consensus       214 ~~~-~~p~-----~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  254 (258)
T 3a28_C          214 YSS-SIAL-----GRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGG  254 (258)
T ss_dssp             HHT-TCTT-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HHh-cCCC-----CCccCHHHHHHHHHHHhCcccCCCCCCEEEECCC
Confidence            110 0111     258899999999999997642   2335666543

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.92  E-value=1.9e-24  Score=183.36  Aligned_cols=218  Identities=13%  Similarity=0.084  Sum_probs=155.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++| +..... ....+...   ..++.++.+|++|++++.++++     
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGT-DPSRVAQTVQEFRNV---GHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCS-CHHHHHHHHHHHHHT---TCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 433222 22223221   3578999999999998888775     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||....      +.+++. ..+++|+.++..+++++.+.    + ..+||++||...+..          
T Consensus       101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~~----------  168 (271)
T 4ibo_A          101 GIDVDILVNNAGIQFRKPMIELETADWQ-RVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSELA----------  168 (271)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSB----------
T ss_pred             CCCCCEEEECCCCCCCCCchhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCCC----------
Confidence              68999999997542      223344 78999999999997766543    4 579999999765421          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .++...|+.+|...+.+.+.++.+   .|++++.++||.+.++........  ......... ..+. 
T Consensus       169 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~-~~p~-  232 (271)
T 4ibo_A          169 ------------RATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN--PEFDAWVKA-RTPA-  232 (271)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC--HHHHHHHHH-HSTT-
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC--HHHHHHHHh-cCCC-
Confidence                        133567999999999999999877   489999999999998752210000  011111111 1111 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                          ..+..++|+|+++++++....   .|..++++|.
T Consensus       233 ----~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG  266 (271)
T 4ibo_A          233 ----KRWGKPQELVGTAVFLSASASDYVNGQIIYVDGG  266 (271)
T ss_dssp             ----CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----CCCcCHHHHHHHHHHHhCccccCCCCcEEEECCC
Confidence                267889999999999987543   2446777554

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.92  E-value=8.8e-24  Score=174.39  Aligned_cols=204  Identities=15%  Similarity=0.061  Sum_probs=150.5

Q ss_pred             CCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---C
Q 020334            2 EEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---G   78 (327)
Q Consensus         2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~   78 (327)
                      ...+|++|||||+|+||.+++++|+++|++|++++| +.                 .     +|++|+++++++++   +
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r-~~-----------------~-----~D~~~~~~v~~~~~~~g~   59 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASR-QT-----------------G-----LDISDEKSVYHYFETIGA   59 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESG-GG-----------------T-----CCTTCHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecC-Cc-----------------c-----cCCCCHHHHHHHHHHhCC
Confidence            334678999999999999999999999999999998 21                 1     89999999888775   6


Q ss_pred             CCEEEEccCCCC-------CCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           79 CAGVIHVAAPID-------IDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        79 ~d~vih~a~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                      +|++|||||...       .+.+++. ..+++|+.++..+++++.+.- +..++|++||...+..               
T Consensus        60 id~lv~nAg~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------------  123 (223)
T 3uce_A           60 FDHLIVTAGSYAPAGKVVDVEVTQAK-YAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKV---------------  123 (223)
T ss_dssp             EEEEEECCCCCCCCSCTTTSCHHHHH-HHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSC---------------
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHH-hhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccC---------------
Confidence            899999999652       1122333 779999999999999988752 1358999999876531               


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcC-CcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCe
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG-LDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISM  229 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (327)
                             .++...|+.+|...+.+.+.++.+++ ++++.++||.+.+|.................. ...+.     ..+
T Consensus       124 -------~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~  190 (223)
T 3uce_A          124 -------VANTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQ-SHLPV-----GKV  190 (223)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHH-HHSTT-----CSC
T ss_pred             -------CCCchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHh-hcCCC-----CCc
Confidence                   13356799999999999999998875 99999999999998644322211111111111 11111     268


Q ss_pred             eeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 020334          230 VHIDDVARAHIFLLEYPDAKG-RYICSSA  257 (327)
Q Consensus       230 i~v~D~a~~~~~~~~~~~~~~-~y~~~~~  257 (327)
                      .+++|+|++++++++.....| .+++++.
T Consensus       191 ~~~~dvA~~~~~l~~~~~~tG~~i~vdgG  219 (223)
T 3uce_A          191 GEASDIAMAYLFAIQNSYMTGTVIDVDGG  219 (223)
T ss_dssp             BCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHccCCCCCCcEEEecCC
Confidence            899999999999998655445 5667553

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.92  E-value=5.6e-24  Score=180.03  Aligned_cols=210  Identities=17%  Similarity=0.124  Sum_probs=150.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+|++|||||+|+||++++++|+++|++|++++| +....             .....+.+|++|.+++.++++      
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r-~~~~~-------------~~~~~~~~Dv~~~~~~~~~~~~~~~~~   92 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADR-AVAGI-------------AADLHLPGDLREAAYADGLPGAVAAGL   92 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSS-CCTTS-------------CCSEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHH-------------HhhhccCcCCCCHHHHHHHHHHHHHhc
Confidence            3578999999999999999999999999999999 33221             122445799999988776654      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++||+||....      ..+++. ..+++|+.++..+++++    ++.+ ..+||++||...+..           
T Consensus        93 g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~-----------  159 (266)
T 3uxy_A           93 GRLDIVVNNAGVISRGRITETTDADWS-LSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRP-----------  159 (266)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBC-----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCC-----------
Confidence             78999999997542      223333 78899999999999987    4444 679999999876521           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC---CchHHHHHHHHhCCccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKF---AGSVRSTLAMVLGNREE  220 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~  220 (327)
                                 .++...|+.+|...+.+.+.++.++   |+++++++||.+.+|......   ............ ...+
T Consensus       160 -----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~p  227 (266)
T 3uxy_A          160 -----------GPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELG-RTVP  227 (266)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHH-TTST
T ss_pred             -----------CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHH-hcCC
Confidence                       1335679999999999999998775   899999999999987421100   000001111111 1111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .     ..+.+++|+|+++++++....   .+..++++|.
T Consensus       228 ~-----~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 3uxy_A          228 L-----GRIAEPEDIADVVLFLASDAARYLCGSLVEVNGG  262 (266)
T ss_dssp             T-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C-----CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence            2     368899999999999997643   2446677543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.92  E-value=2.3e-23  Score=177.35  Aligned_cols=222  Identities=14%  Similarity=0.049  Sum_probs=156.0

Q ss_pred             CCC-CCCeEEEeCCc--chhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc
Q 020334            1 MEE-QKGKVCVTGGT--GFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         1 m~~-~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      |.. .+|++|||||+  |+||.+++++|+++|++|++++| +.........+...   .+++.++.+|++|++++.++++
T Consensus         1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~   76 (275)
T 2pd4_A            1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYL-NESLEKRVRPIAQE---LNSPYVYELDVSKEEHFKSLYN   76 (275)
T ss_dssp             -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEES-STTTHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEcCCCCHHHHHHHHH
Confidence            542 35789999999  99999999999999999999999 43322233333221   1247889999999998887765


Q ss_pred             -------CCCEEEEccCCCCC----------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCC
Q 020334           78 -------GCAGVIHVAAPIDI----------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKD  139 (327)
Q Consensus        78 -------~~d~vih~a~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~  139 (327)
                             ++|++||+||....          +.+++ ...+++|+.++..+++++.+.- ...+||++||...+..    
T Consensus        77 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----  151 (275)
T 2pd4_A           77 SVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAF-NTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY----  151 (275)
T ss_dssp             HHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHH-HHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB----
T ss_pred             HHHHHcCCCCEEEECCccCccccCCCCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC----
Confidence                   67999999986431          12233 3789999999999999998751 0259999999765421    


Q ss_pred             CCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhC
Q 020334          140 VDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLG  216 (327)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~  216 (327)
                                        .++...|+.+|...+.+.+.++.++   |+++++++||.+.++..... .. ..........
T Consensus       152 ------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~-~~~~~~~~~~  211 (275)
T 2pd4_A          152 ------------------MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI-AD-FRMILKWNEI  211 (275)
T ss_dssp             ------------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS-TT-HHHHHHHHHH
T ss_pred             ------------------CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhc-cc-cHHHHHHHHh
Confidence                              1234579999999999999988775   89999999999999853321 11 1111111111


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      . .+.     ..+..++|+|+++++++....   .+..+++.+.
T Consensus       212 ~-~p~-----~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg  249 (275)
T 2pd4_A          212 N-APL-----RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG  249 (275)
T ss_dssp             H-STT-----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             c-CCc-----CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            0 111     147799999999999987532   2335566554

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.92  E-value=1.2e-23  Score=178.26  Aligned_cols=223  Identities=15%  Similarity=0.111  Sum_probs=153.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---CC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---GC   79 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~   79 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++| +.... .....+.... ....+.++.+|++|++.+.++++   ++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~g~i   86 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGR-REENVNETIKEIRAQY-PDAILQPVVADLGTEQGCQDVIEKYPKV   86 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHHHC-TTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhC-CCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence            3578999999999999999999999999999999 43222 2222222110 12457889999999998888775   78


Q ss_pred             CEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           80 AGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        80 d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                      |++|||||.....      .+++. +.+++|+.++..+.+++.    +.+ ..++|++||...+..              
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--------------  150 (267)
T 3t4x_A           87 DILINNLGIFEPVEYFDIPDEDWF-KLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIMP--------------  150 (267)
T ss_dssp             SEEEECCCCCCCCCGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTSC--------------
T ss_pred             CEEEECCCCCCCCccccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhccC--------------
Confidence            9999999975421      22333 679999999777766554    344 679999999876521              


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCC-------CCCchHHHHHHH-HhC--
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICP-------KFAGSVRSTLAM-VLG--  216 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~-------~~~~~~~~~~~~-~~~--  216 (327)
                              .++...|+.+|...+.+.+.++.++   |+++..++||.+.++....       ............ ...  
T Consensus       151 --------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (267)
T 3t4x_A          151 --------SQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENR  222 (267)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHC
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccC
Confidence                    1335679999999999999998875   6999999999998863110       000000111110 000  


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ...+.     ..+.+++|+|+++++++....   .|..++++|.
T Consensus       223 ~~~~~-----~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  261 (267)
T 3t4x_A          223 PTSII-----QRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGG  261 (267)
T ss_dssp             TTCSS-----CSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             Ccccc-----cCccCHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence            00111     368999999999999987532   2446777554

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.91  E-value=9.8e-24  Score=179.55  Aligned_cols=216  Identities=19%  Similarity=0.148  Sum_probs=152.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| +...........     ..++.++.+|++|++++.++++       
T Consensus        29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (277)
T 3gvc_A           29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADI-DGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDACVAAFG  102 (277)
T ss_dssp             TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999 433222221111     2478999999999998877665       


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|++|||||....      +.+++. ..+++|+.++..+++++.+    .+ ..+||++||...+..            
T Consensus       103 ~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~------------  168 (277)
T 3gvc_A          103 GVDKLVANAGVVHLASLIDTTVEDFD-RVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQVA------------  168 (277)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSC------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccC------------
Confidence            68999999997542      223343 7899999999888887754    33 578999999765421            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC---CchHHH-HHHHHhCCccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKF---AGSVRS-TLAMVLGNREE  220 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~---~~~~~~-~~~~~~~~~~~  220 (327)
                                .++...|+.+|...+.+.+.++.+   .|+++++++||.+++|......   ...... ......  ..+
T Consensus       169 ----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~  236 (277)
T 3gvc_A          169 ----------VGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMI--ARL  236 (277)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHH--HHH
T ss_pred             ----------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhh--hcc
Confidence                      133568999999999999988876   4899999999999987421100   000000 000000  000


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .     ..+.+++|+|+++++++....   .+..++++|.
T Consensus       237 ~-----~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  271 (277)
T 3gvc_A          237 Q-----GRMAAPEEMAGIVVFLLSDDASMITGTTQIADGG  271 (277)
T ss_dssp             H-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             c-----cCCCCHHHHHHHHHHHcCCccCCccCcEEEECCc
Confidence            1     258899999999999997643   2446777554

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=9.9e-24  Score=180.13  Aligned_cols=225  Identities=15%  Similarity=0.074  Sum_probs=154.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++| ++...... ..+........++.++.+|++|++++.++++     
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGR-SSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999 43322221 2222210001168899999999998887765     


Q ss_pred             --CCCEEEEccCCCCCC----------CCchHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCCCcc
Q 020334           78 --GCAGVIHVAAPIDID----------GKETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 --~~d~vih~a~~~~~~----------~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                        ++|++||+||.....          .+.+ ...+++|+.++.++++++.+.-  +.++||++||...+...       
T Consensus        84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  155 (280)
T 1xkq_A           84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIY-HKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA-------  155 (280)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC-------
T ss_pred             cCCCCEEEECCCCCCCCCCCcccccCCHHHH-HHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCC-------
Confidence              689999999865321          1223 3789999999999998877531  01699999998765210       


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC-Cch----HHHHHHHHh
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKF-AGS----VRSTLAMVL  215 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~-~~~----~~~~~~~~~  215 (327)
                                    .++...|+.+|...+.+.+.++.+   .|+++++++||.+++|...... ...    ........ 
T Consensus       156 --------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-  220 (280)
T 1xkq_A          156 --------------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASH-  220 (280)
T ss_dssp             --------------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC-
T ss_pred             --------------CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHH-
Confidence                          022457999999999999998865   4899999999999998532110 000    00011111 


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcCC---C-CCceEEEecc
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEYP---D-AKGRYICSSA  257 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~-~~~~y~~~~~  257 (327)
                      ....+.     ..+.+++|+|+++++++...   . .+..+++.+.
T Consensus       221 ~~~~p~-----~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG  261 (280)
T 1xkq_A          221 KECIPI-----GAAGKPEHIANIILFLADRNLSFYILGQSIVADGG  261 (280)
T ss_dssp             TTTCTT-----SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HcCCCC-----CCCCCHHHHHHHHHHhcCcccccCccCCeEEECCC
Confidence            111111     26899999999999998754   2 3446667554

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.91  E-value=9.2e-24  Score=179.91  Aligned_cols=214  Identities=19%  Similarity=0.089  Sum_probs=150.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHH-CCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLD-HGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      .+++||||||+|+||++++++|++ .|++|++++| +..... ....+...   ..++.++.+|++|.+++.++++    
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~   78 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTAR-DVTRGQAAVQQLQAE---GLSPRFHQLDIDDLQSIRALRDFLRK   78 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEES-SHHHHHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeC-ChHHHHHHHHHHHhc---CCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            368999999999999999999999 9999999999 432221 22222211   2468899999999998888776    


Q ss_pred             ---CCCEEEEccCCCCCCC-----CchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCC---------
Q 020334           78 ---GCAGVIHVAAPIDIDG-----KETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKD---------  139 (327)
Q Consensus        78 ---~~d~vih~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~---------  139 (327)
                         ++|+||||||......     .......+++|+.++.++++++.+.- +.++||++||...+......         
T Consensus        79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~  158 (276)
T 1wma_A           79 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFR  158 (276)
T ss_dssp             HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred             hcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcc
Confidence               7899999998654211     12234789999999999999998763 13599999998776321000         


Q ss_pred             CCcccCCCCCChhH----------hhhcCCCchhhHhhhHHHHHHHHHHHHH-------cCCcEEEEecCceecCCCCCC
Q 020334          140 VDMLDETFWSDEDY----------IRKLDIWGKSYVLTKTLTERAALEFAEE-------HGLDLVTLIPSFVVGPFICPK  202 (327)
Q Consensus       140 ~~~~~E~~~~~~~~----------~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-------~~~~~~i~R~~~v~G~~~~~~  202 (327)
                      ...++|+++.....          ......|.+.|+.+|...+.+++.++.+       .++++++++||.+.++.... 
T Consensus       159 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~-  237 (276)
T 1wma_A          159 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP-  237 (276)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-
T ss_pred             ccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-
Confidence            01122221100000          0000123478999999999999888765       48999999999998874221 


Q ss_pred             CCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          203 FAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                                              ..+.+++|+|+++++++..+
T Consensus       238 ------------------------~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          238 ------------------------KATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             ------------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred             ------------------------cccCChhHhhhhHhhhhcCc
Confidence                                    14789999999999999754

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.91  E-value=2.8e-23  Score=174.00  Aligned_cols=205  Identities=18%  Similarity=0.136  Sum_probs=146.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|+||||||+|+||++++++|+++|++|++++| ++....             .+..+.+|++|++++.++++       
T Consensus        15 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~-------------~~~~~~~D~~~~~~~~~~~~~~~~~~g   80 (247)
T 1uzm_A           15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHR-GSGAPK-------------GLFGVEVDVTDSDAVDRAFTAVEEHQG   80 (247)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SSCCCT-------------TSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-ChHHHH-------------HhcCeeccCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999 433221             22247899999998877664       


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|++||+||....      ..+++ ...+++|+.++.++++++.+    .+ .++||++||...+...           
T Consensus        81 ~id~lv~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----------  147 (247)
T 1uzm_A           81 PVEVLVSNAGLSADAFLMRMTEEKF-EKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGI-----------  147 (247)
T ss_dssp             SCSEEEEECSCCC-----CCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC---------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhccCC-----------
Confidence            58999999986542      22233 38899999999999887754    33 6799999998665311           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                 ++...|+.+|...+.+.+.++.++   |+++++++||.+.++.... ...   ....... ...+.   
T Consensus       148 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~---~~~~~~~-~~~p~---  208 (247)
T 1uzm_A          148 -----------GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA-LDE---RIQQGAL-QFIPA---  208 (247)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-SCH---HHHHHHG-GGCTT---
T ss_pred             -----------CCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh-cCH---HHHHHHH-hcCCC---
Confidence                       224579999999999999988764   8999999999998764211 111   1111111 11111   


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          225 LNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                        ..+.+++|+|+++++++....   .+..+++.+.
T Consensus       209 --~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG  242 (247)
T 1uzm_A          209 --KRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG  242 (247)
T ss_dssp             --CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCcCHHHHHHHHHHHcCccccCCcCCEEEECCC
Confidence              258899999999999987532   2345667554

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.91  E-value=6.9e-24  Score=177.47  Aligned_cols=212  Identities=17%  Similarity=0.137  Sum_probs=153.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHH-CCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLD-HGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|+||.+++++|++ .|+.|++.+| +....            ...+.++.+|++|++++.++++     
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~-~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   69 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDI-QQSFS------------AENLKFIKADLTKQQDITNVLDIIKNV   69 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEES-SCCCC------------CTTEEEEECCTTCHHHHHHHHHHTTTC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecc-ccccc------------cccceEEecCcCCHHHHHHHHHHHHhC
Confidence            467899999999999999999999 7899999988 33211            1467899999999999988775     


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                      ++|++||+||....      +.+++. ..+++|+.++..+++++.+.- ...++|++||...+..               
T Consensus        70 ~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------------  133 (244)
T 4e4y_A           70 SFDGIFLNAGILIKGSIFDIDIESIK-KVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA---------------  133 (244)
T ss_dssp             CEEEEEECCCCCCCBCTTTSCHHHHH-HHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC---------------
T ss_pred             CCCEEEECCccCCCCCcccCCHHHHH-HHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC---------------
Confidence            68999999997531      222333 789999999999999988753 1248999999876531               


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCch-------HHHHHHHHhCCccc
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGS-------VRSTLAMVLGNREE  220 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~-------~~~~~~~~~~~~~~  220 (327)
                             .++...|+.||...+.+.+.++.+   .|+++++++||.+.+|.........       ......... ...+
T Consensus       134 -------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p  205 (244)
T 4e4y_A          134 -------KPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEE-KEFP  205 (244)
T ss_dssp             -------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHH-TTST
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHh-hcCC
Confidence                   133567999999999999999875   4899999999999887421100000       000111111 1111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .     ..+.+++|+|+++++++....   .+..++++|.
T Consensus       206 ~-----~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  240 (244)
T 4e4y_A          206 L-----NRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGG  240 (244)
T ss_dssp             T-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C-----CCCcCHHHHHHHHHHHhcCccccccCCeEeECCC
Confidence            1     368899999999999997543   2446667554

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.91  E-value=7.4e-23  Score=173.47  Aligned_cols=222  Identities=11%  Similarity=0.022  Sum_probs=158.7

Q ss_pred             CCCCeEEEeCCcch--hHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            3 EQKGKVCVTGGTGF--IGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      ..++++|||||+|+  ||.+++++|+++|++|++++| +......+..+..... ..++.++.+|++|++++.++++   
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYA-GERLEKSVHELAGTLD-RNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHHHTSS-SCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecC-chHHHHHHHHHHHhcC-CCCceEEeCCCCCHHHHHHHHHHHH
Confidence            34678999999988  999999999999999999999 4433333333322211 1368999999999998887765   


Q ss_pred             ----CCCEEEEccCCCC----------CCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCc
Q 020334           78 ----GCAGVIHVAAPID----------IDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDM  142 (327)
Q Consensus        78 ----~~d~vih~a~~~~----------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~  142 (327)
                          ++|++||+||...          .+.+.+ ...+++|+.++.++++++...- +..+||++||...+..       
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------  154 (266)
T 3oig_A           83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGF-LLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV-------  154 (266)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHH-HHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC-------
T ss_pred             HHhCCeeEEEEccccccccccccchhhccHHHH-HHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc-------
Confidence                6899999998653          112233 3788999999999999988753 1359999999776521       


Q ss_pred             ccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcc
Q 020334          143 LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNRE  219 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (327)
                                     .+....|+.+|...+.+.+.++.++   |++++.++||.+.++..... .. ........... .
T Consensus       155 ---------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~-~~~~~~~~~~~-~  216 (266)
T 3oig_A          155 ---------------MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGI-SD-FNSILKDIEER-A  216 (266)
T ss_dssp             ---------------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC-TT-HHHHHHHHHHH-S
T ss_pred             ---------------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc-cc-hHHHHHHHHhc-C
Confidence                           1235679999999999999988765   79999999999998754432 11 11111111111 1


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      +.     ..+..++|+|+++++++....   .+..++++|+
T Consensus       217 ~~-----~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG  252 (266)
T 3oig_A          217 PL-----RRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSG  252 (266)
T ss_dssp             TT-----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCC
Confidence            11     257899999999999997633   2446667554

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=7.4e-24  Score=180.88  Aligned_cols=209  Identities=20%  Similarity=0.154  Sum_probs=145.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++++|||||+|+||++++++|+++|++|++++| ++.....+ ..+... ....++.++.+|++|++++.++++      
T Consensus        32 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           32 DRLALVTGASGGIGAAVARALVQQGLKVVGCAR-TVGNIEELAAECKSA-GYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT-TCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEC-ChHHHHHHHHHHHhc-CCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999 43322222 122111 111357889999999998887765      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhH----HHHHHHHHHhcCCc--cEEEEeccceeeeecCCCCCccc
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNG----TIGILKSCLKSGTV--KRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~----~~~l~~~~~~~~~~--~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                       ++|+|||+||....      ..+.+ ...+++|+.+    ++.+++.+++.+ .  ++||++||...+...        
T Consensus       110 g~iD~vi~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~~~~~~~~~~l~~~~~~~-~~~g~iv~isS~~~~~~~--------  179 (279)
T 1xg5_A          110 SGVDICINNAGLARPDTLLSGSTSGW-KDMFNVNVLALSICTREAYQSMKERN-VDDGHIININSMSGHRVL--------  179 (279)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHTT-CCSCEEEEECCGGGTSCC--------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhcC-CCCceEEEEcChhhcccC--------
Confidence             78999999986532      12233 3789999999    667777777665 3  799999998765210        


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH-----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE-----HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNRE  219 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (327)
                         +         .++...|+.+|...+.+++.++.+     .++++++++|+.+.++............... .     
T Consensus       180 ---~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~-----  241 (279)
T 1xg5_A          180 ---P---------LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAA-T-----  241 (279)
T ss_dssp             ---S---------CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHH-H-----
T ss_pred             ---C---------CCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhh-h-----
Confidence               0         133567999999999998888765     3799999999999887421100100000000 0     


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                          .....+++++|+|+++++++..+.
T Consensus       242 ----~~~~~~~~~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          242 ----YEQMKCLKPEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             ----HC---CBCHHHHHHHHHHHHHSCT
T ss_pred             ----cccccCCCHHHHHHHHHHHhcCCc
Confidence                011257899999999999998754

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.91  E-value=8.8e-24  Score=179.01  Aligned_cols=220  Identities=14%  Similarity=0.086  Sum_probs=155.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++| +...... ...+...  ...++.++.+|++|+++++++++     
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   95 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGR-DVSELDAARRALGEQ--FGTDVHTVAIDLAEPDAPAELARRAAEA   95 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH--HCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHh--cCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 4332222 2222110  02578999999999998877665     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||....      +.+++. ..+++|+.++..+++++.+.    +...+||++||...+..          
T Consensus        96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~----------  164 (266)
T 4egf_A           96 FGGLDVLVNNAGISHPQPVVDTDPQLFD-ATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP----------  164 (266)
T ss_dssp             HTSCSEEEEECCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC----------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC----------
Confidence              78999999997542      122333 78999999999988877543    22369999999876521          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .++...|+.+|...+.+.+.++.++   |++++.++||.+.+|........  ........ ...+. 
T Consensus       165 ------------~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~-~~~p~-  228 (266)
T 4egf_A          165 ------------LPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGD--EAKSAPMI-ARIPL-  228 (266)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCS--HHHHHHHH-TTCTT-
T ss_pred             ------------CCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccC--hHHHHHHH-hcCCC-
Confidence                        1335679999999999999998774   89999999999988742211110  01111111 11122 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                          ..+..++|+|+++++++....   .+..+++++.
T Consensus       229 ----~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 4egf_A          229 ----GRFAVPHEVSDAVVWLASDAASMINGVDIPVDGG  262 (266)
T ss_dssp             ----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCC
Confidence                268899999999999997633   2446677553

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=6.6e-24  Score=183.39  Aligned_cols=222  Identities=14%  Similarity=0.103  Sum_probs=153.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCC--CCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNL--PGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      +++||||||+|+||++++++|+++|++|++++| +...... ...+...  .....++.++.+|++|++++.++++    
T Consensus        18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASR-KLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999 4322211 1222110  0013578999999999998887775    


Q ss_pred             ---CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcC---CccEEEEeccceeeeecCCCCCcccC
Q 020334           78 ---GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSG---TVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 ---~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                         ++|+||||||....      ..+++ ...+++|+.++.++++++.+..   ..+++|++||.. +. +         
T Consensus        97 ~~g~id~li~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~-~---------  164 (303)
T 1yxm_A           97 TFGKINFLVNNGGGQFLSPAEHISSKGW-HAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KA-G---------  164 (303)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TT-C---------
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-cc-C---------
Confidence               58999999995432      11223 3779999999999999876521   147899999976 31 1         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .+....|+.+|...+.+.+.+++++   |++++++||+.++||.................. ...+  
T Consensus       165 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~p--  229 (303)
T 1yxm_A          165 ------------FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSF-QKIP--  229 (303)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGG-GGST--
T ss_pred             ------------CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHH-hcCc--
Confidence                        1224579999999999999998875   899999999999998421111110000000000 0011  


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                         ...+.+++|+|+++++++....   .+..+++.+.
T Consensus       230 ---~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG  264 (303)
T 1yxm_A          230 ---AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG  264 (303)
T ss_dssp             ---TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---ccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCC
Confidence               1258899999999999997532   2346677554

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.91  E-value=1.3e-23  Score=177.85  Aligned_cols=224  Identities=17%  Similarity=0.060  Sum_probs=154.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++| +.+.... ...+.... ...++.++.+|++|++++.++++     
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCAR-DGERLRAAESALRQRF-PGARLFASVCDVLDALQVRAFAEACERT   84 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHHS-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHhc-CCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999 4332222 22222100 11358999999999998877664     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                        ++|++||+||....      +.+++. ..+++|+.++..+++++.+.   ....+||++||...+..           
T Consensus        85 ~g~id~lvnnAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  152 (265)
T 3lf2_A           85 LGCASILVNNAGQGRVSTFAETTDEAWS-EELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQP-----------  152 (265)
T ss_dssp             HCSCSEEEECCCCCCCBCTTTCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSC-----------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCC-----------
Confidence              68999999986532      223343 78999999999999887542   12578999999775521           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC------chHHHHHHHHh-C
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFA------GSVRSTLAMVL-G  216 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~------~~~~~~~~~~~-~  216 (327)
                                 .+....|+.+|...+.+.+.++.++   |++++.++||.+.+|.......      ........... .
T Consensus       153 -----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (265)
T 3lf2_A          153 -----------EPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARN  221 (265)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHH
T ss_pred             -----------CCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhc
Confidence                       1335679999999999999998775   8999999999998863211000      00011111111 1


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCCC--C-CceEEEecc
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYPD--A-KGRYICSSA  257 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~~  257 (327)
                      ...+.     ..+..++|+|+++++++....  . |..++++|.
T Consensus       222 ~~~p~-----~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  260 (265)
T 3lf2_A          222 KQIPL-----GRLGKPIEAARAILFLASPLSAYTTGSHIDVSGG  260 (265)
T ss_dssp             TTCTT-----CSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSS
T ss_pred             cCCCc-----CCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCC
Confidence            11122     268899999999999997533  2 335666554

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=4.9e-24  Score=183.29  Aligned_cols=236  Identities=15%  Similarity=0.080  Sum_probs=159.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++| ++..... ...+........++.++.+|++|++++.++++     
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGR-NEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999 4332222 12222110000168899999999998887765     


Q ss_pred             --CCCEEEEccCCCCCC--------CCchHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDID--------GKETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||.....        .+++ ...+++|+.++.++++++.+.-  +.++||++||...+...         
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~---------  173 (297)
T 1xhl_A          104 FGKIDILVNNAGANLADGTANTDQPVELY-QKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA---------  173 (297)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC---------
T ss_pred             cCCCCEEEECCCcCcCCCCccccCCHHHH-HHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCC---------
Confidence              689999999864321        1233 3789999999999988877541  02699999998765210         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC-CchH----HHHHHHHhCC
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKF-AGSV----RSTLAMVLGN  217 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~-~~~~----~~~~~~~~~~  217 (327)
                                  .++...|+.+|...+.+.+.++.+   .|+++++++||.+.++...... ....    ....... ..
T Consensus       174 ------------~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~  240 (297)
T 1xhl_A          174 ------------HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSR-KE  240 (297)
T ss_dssp             ------------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC-TT
T ss_pred             ------------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHH-Hh
Confidence                        022457999999999999998865   4899999999999987422110 0000    0011110 11


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCC---C-CCceEEEecc-ccCHHHHHHHH
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYP---D-AKGRYICSSA-KLTIQEMAEFL  268 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~-~~~~y~~~~~-~~s~~e~~~~i  268 (327)
                      ..+.     ..+..++|+|+++++++...   . .+..+++.+. ...+.+.+..+
T Consensus       241 ~~p~-----~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~  291 (297)
T 1xhl_A          241 CIPV-----GHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDL  291 (297)
T ss_dssp             TCTT-----SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCH
T ss_pred             cCCC-----CCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccch
Confidence            1111     26899999999999998754   2 3446667543 45555544333

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.91  E-value=5e-24  Score=183.68  Aligned_cols=214  Identities=17%  Similarity=0.104  Sum_probs=147.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++||||||+|+||.+++++|+++|++|++++| +...... ...+...   ..++.++.+|++|.+++.++++      
T Consensus        31 gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           31 GRAAVVTGGASGIGLATATEFARRGARLVLSDV-DQPALEQAVNGLRGQ---GFDAHGVVCDVRHLDEMVRLADEAFRLL  106 (301)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999999999 4332222 2222221   2578999999999998887765      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++|||||....      +.+++ ...+++|+.++.++++++..    .+...+||++||...+..           
T Consensus       107 g~id~lvnnAg~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  174 (301)
T 3tjr_A          107 GGVDVVFSNAGIVVAGPLAQMNHDDW-RWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP-----------  174 (301)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC-----------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHH-HHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-----------
Confidence             68999999997542      22233 37899999999999988654    222469999999876521           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc-cccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR-EEYS  222 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~  222 (327)
                                 .++...|+.||...+.+.+.++.++   |+++++++||.+.++......  ............+ ..+.
T Consensus       175 -----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~~  241 (301)
T 3tjr_A          175 -----------NAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSE--RIRGADYGMSATPEGAFG  241 (301)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHH--HHC---------------
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccc--cccchhhccccChhhhcc
Confidence                       1335679999999999999988765   899999999999876321100  0000000000000 0011


Q ss_pred             -cccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          223 -ILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       223 -~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                       ......+++++|+|++++.+++.+.
T Consensus       242 ~~~~~~~~~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          242 PLPTQDESVSADDVARLTADAILANR  267 (301)
T ss_dssp             -------CCCHHHHHHHHHHHHHHTC
T ss_pred             ccccccCCCCHHHHHHHHHHHHhcCC
Confidence             0112468999999999999998753

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.91  E-value=4.6e-23  Score=176.27  Aligned_cols=223  Identities=13%  Similarity=0.032  Sum_probs=154.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++|+....... ...+...   ..++.++.+|++|.+++.++++     
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN---GSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh---CCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999943221111 1222211   2468899999999988877654     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                        ++|++||+||....      +.+++. ..+++|+.++.++++++.+.  + .++||++||...+...           
T Consensus       105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~-----------  171 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVSFGHVKDVTPEEFD-RVFTINTRGQFFVAREAYKHLEI-GGRLILMGSITGQAKA-----------  171 (283)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHSCT-TCEEEEECCGGGTCSS-----------
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHhc-CCeEEEEechhhccCC-----------
Confidence              68999999997542      123333 78999999999999999876  3 5799999997654210           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC----Cc---hHHHHHHHHhC-
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKF----AG---SVRSTLAMVLG-  216 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~----~~---~~~~~~~~~~~-  216 (327)
                                ..+...|+.+|...+.+.+.++.++   |+++++++||.+.++......    +.   .-......+.. 
T Consensus       172 ----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (283)
T 1g0o_A          172 ----------VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAV  241 (283)
T ss_dssp             ----------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHH
T ss_pred             ----------CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhh
Confidence                      0125679999999999999988764   899999999999887321100    00   00011111111 


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ...+.     ..+.+++|+|+++++++....   .+..+++.|.
T Consensus       242 ~~~p~-----~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG  280 (283)
T 1g0o_A          242 QWSPL-----RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG  280 (283)
T ss_dssp             HSCTT-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCCC-----CCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCC
Confidence            01111     258899999999999997542   2335566544

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.91  E-value=2.8e-23  Score=176.31  Aligned_cols=222  Identities=14%  Similarity=0.093  Sum_probs=155.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|+++++++......+ ..+...   ..++.++.+|++|++++.++++      
T Consensus        18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   94 (270)
T 3is3_A           18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL---GSDAIAIKADIRQVPEIVKLFDQAVAHF   94 (270)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999888443322222 222221   3578999999999998887765      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                       ++|++||+||....      +.+++. ..+++|+.++.++++++.+.- ...++|++||......+             
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------  160 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFD-RVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFS-------------  160 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCC-------------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCC-------------
Confidence             68999999997542      223344 889999999999999988753 13599999996521100             


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC----CC---c-hHHHHHHHHhCCc
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPK----FA---G-SVRSTLAMVLGNR  218 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~----~~---~-~~~~~~~~~~~~~  218 (327)
                              .++...|+.+|...+.+.+.++.++   |++++.++||.+.++.....    .+   . .......... ..
T Consensus       161 --------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  231 (270)
T 3is3_A          161 --------VPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAA-HA  231 (270)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHH-HH
T ss_pred             --------CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHH-hc
Confidence                    1335679999999999999998874   89999999999998753210    00   0 0011111111 11


Q ss_pred             cccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          219 EEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       219 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .+.     ..+.+++|+|+++++++....   .|..++++|.
T Consensus       232 ~p~-----~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  268 (270)
T 3is3_A          232 SPL-----HRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG  268 (270)
T ss_dssp             STT-----CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCC-----CCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCC
Confidence            111     268899999999999997543   2345666543

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.91  E-value=2.2e-23  Score=176.19  Aligned_cols=217  Identities=18%  Similarity=0.141  Sum_probs=154.6

Q ss_pred             CCCC-CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQ-KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~-~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |..+ +|++|||||+|+||.+++++|+++|++|++++| +++..   .......  ..++.++.+|++|++++.++++  
T Consensus         1 m~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~---~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~   74 (263)
T 2a4k_A            1 MGRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDR-EERLL---AEAVAAL--EAEAIAVVADVSDPKAVEAVFAEA   74 (263)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHH---HHHHHTC--CSSEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHH---HHHHHHh--cCceEEEEcCCCCHHHHHHHHHHH
Confidence            4433 578999999999999999999999999999999 43222   2211111  1468899999999998887765  


Q ss_pred             -----CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccC
Q 020334           78 -----GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 -----~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                           ++|++||+||.....      .+++ ...+++|+.++.++++++.+.- +..+||++||...++ .         
T Consensus        75 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-~---------  143 (263)
T 2a4k_A           75 LEEFGRLHGVAHFAGVAHSALSWNLPLEAW-EKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG-A---------  143 (263)
T ss_dssp             HHHHSCCCEEEEGGGGTTTTC----CHHHH-HHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC-H---------
T ss_pred             HHHcCCCcEEEECCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcC-C---------
Confidence                 579999999865421      1223 3788999999999999987642 136999999987652 1         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                   ++...|+.+|...+.+.+.++.++   |+++++++||.+.++..... ..   ......... .+. 
T Consensus       144 -------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~---~~~~~~~~~-~p~-  204 (263)
T 2a4k_A          144 -------------FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL-PP---WAWEQEVGA-SPL-  204 (263)
T ss_dssp             -------------HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS-CH---HHHHHHHHT-STT-
T ss_pred             -------------CCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc-CH---HHHHHHHhc-CCC-
Confidence                         224579999999999999888764   89999999999999864321 11   111111111 111 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC--C-CceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD--A-KGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~~  257 (327)
                          ..+.+++|+|+++++++....  . +..+++.+.
T Consensus       205 ----~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG  238 (263)
T 2a4k_A          205 ----GRAGRPEEVAQAALFLLSEESAYITGQALYVDGG  238 (263)
T ss_dssp             ----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence                258899999999999987542  2 345667554

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.91  E-value=2.9e-23  Score=174.12  Aligned_cols=202  Identities=21%  Similarity=0.187  Sum_probs=144.9

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      .+++++|||||+|+||.+++++|+++|++|++++| +....... ..+........++.++.+|++|.+++.++++    
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIAR-SKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEES-CHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999 43332222 2221111112468899999999998877664    


Q ss_pred             ---CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 ---GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 ---~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                         ++|++||+||.....     .+++ ...+++|+.++..+++++.    +.+ ..++|++||...+...         
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~---------  152 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFMDGSLSEPVDNF-RKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYGF---------  152 (250)
T ss_dssp             HHCCEEEEEECCCCCCCCCCSCHHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC----------------
T ss_pred             hcCCCCEEEECCCcCCCCCCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCCC---------
Confidence               689999999975421     1223 3788999999998888774    334 5799999998765311         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                   .+...|+.+|...+.+.+.++.++   |++++.++||.+..+...            . ....... 
T Consensus       153 -------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~------------~-~~~~~~~-  205 (250)
T 3nyw_A          153 -------------ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAK------------K-AGTPFKD-  205 (250)
T ss_dssp             -------------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHH------------H-TTCCSCG-
T ss_pred             -------------CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhh------------h-cCCCccc-
Confidence                         224579999999999999988775   899999999998775211            0 0111111 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                          ..++.++|+|+++++++..+.
T Consensus       206 ----~~~~~p~dva~~v~~l~s~~~  226 (250)
T 3nyw_A          206 ----EEMIQPDDLLNTIRCLLNLSE  226 (250)
T ss_dssp             ----GGSBCHHHHHHHHHHHHTSCT
T ss_pred             ----ccCCCHHHHHHHHHHHHcCCC
Confidence                258899999999999998764

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.91  E-value=2.4e-23  Score=175.19  Aligned_cols=217  Identities=15%  Similarity=0.105  Sum_probs=150.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      |+|++|||||+|+||.+++++|+++|  +.|++.+| +......+....     ..++.++.+|++|++++.++++    
T Consensus         1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r-~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   74 (254)
T 3kzv_A            1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVAR-SEAPLKKLKEKY-----GDRFFYVVGDITEDSVLKQLVNAAVK   74 (254)
T ss_dssp             -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEES-CHHHHHHHHHHH-----GGGEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecC-CHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999884  78988888 433322222111     2468999999999998887765    


Q ss_pred             ---CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 ---GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ---~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                         ++|++|||||....       +.+++. ..+++|+.++..+++++    ++.+  .++|++||...+..        
T Consensus        75 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~--------  143 (254)
T 3kzv_A           75 GHGKIDSLVANAGVLEPVQNVNEIDVNAWK-KLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMY--------  143 (254)
T ss_dssp             HHSCCCEEEEECCCCCCCTTTTSCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCS--------
T ss_pred             hcCCccEEEECCcccCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccC--------
Confidence               68999999997431       122333 78999999999998887    4433  69999999876531        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc-CCcEEEEecCceecCCCCCCCCch-----HHHHHHHHhCC
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH-GLDLVTLIPSFVVGPFICPKFAGS-----VRSTLAMVLGN  217 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~R~~~v~G~~~~~~~~~~-----~~~~~~~~~~~  217 (327)
                                    .++...|+.+|...+.+.+.++.++ +++++.++||.+.++.........     -......... 
T Consensus       144 --------------~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-  208 (254)
T 3kzv_A          144 --------------FSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRG-  208 (254)
T ss_dssp             --------------SCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHH-
T ss_pred             --------------CCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHH-
Confidence                          1335679999999999999999876 899999999999998644321100     0111111110 


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCCC---CCc-eEEEecc
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYPD---AKG-RYICSSA  257 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~-~y~~~~~  257 (327)
                      ..+.     ..+.+++|+|+++++++....   ..| .+++.++
T Consensus       209 ~~~~-----~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~  247 (254)
T 3kzv_A          209 LKEN-----NQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDP  247 (254)
T ss_dssp             HHTT-----C----CHHHHHHHHHHHHHCCCGGGTTCEEETTCG
T ss_pred             HHhc-----CCcCCcccHHHHHHHHHhhcccCCCCccEEEecCc
Confidence            1111     268899999999999987653   234 5556544

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.91  E-value=3.8e-24  Score=180.01  Aligned_cols=214  Identities=14%  Similarity=0.103  Sum_probs=149.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|++|||||+|+||++++++|+++|++|++++| ++.....+....     ..++.++.+|++|++++.++++       
T Consensus         6 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (253)
T 1hxh_A            6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI-NEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECS-CHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999 432222211111     2468899999999998877665       


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|++||+||....      ..+++. ..+++|+.++..+.+++    ++.+  ++||++||...+..            
T Consensus        80 ~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~------------  144 (253)
T 1hxh_A           80 TLNVLVNNAGILLPGDMETGRLEDFS-RLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLP------------  144 (253)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSC------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHH-HHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCC------------
Confidence            47999999986542      122333 78899998777666654    4433  79999999876531            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc-----CCcEEEEecCceecCCCCCCCC-chHHHHHHHHhCC--cc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH-----GLDLVTLIPSFVVGPFICPKFA-GSVRSTLAMVLGN--RE  219 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~i~R~~~v~G~~~~~~~~-~~~~~~~~~~~~~--~~  219 (327)
                                .++...|+.+|...+.+.+.++.++     |++++++||+.+++|....... .....   .....  ..
T Consensus       145 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~~~~~  211 (253)
T 1hxh_A          145 ----------IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKE---MVLHDPKLN  211 (253)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHH---HHBCBTTTB
T ss_pred             ----------CCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHH---HHhhhhccC
Confidence                      1235679999999999999887663     8999999999999984221000 11000   01110  11


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      +.     ..+.+++|+|+++++++..+.   .+..+++.+.
T Consensus       212 p~-----~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  247 (253)
T 1hxh_A          212 RA-----GRAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             TT-----CCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             cc-----CCCCCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence            11     268999999999999997642   2345667654

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.91  E-value=1.5e-23  Score=178.03  Aligned_cols=217  Identities=17%  Similarity=0.165  Sum_probs=154.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++++|||||+|+||.+++++|+++|++|++++|+........ ..+..   ...++.++.+|++|.+++.++++      
T Consensus        25 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           25 KRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERD---AGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHT---TTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh---cCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999986343222221 11221   13578999999999998887765      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++||+||....      ..+++ ...+++|+.++.++++.+..    .+ ..+||++||...+..           
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-----------  168 (269)
T 3gk3_A          102 GKVDVLINNAGITRDATFMKMTKGDW-DAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRG-----------  168 (269)
T ss_dssp             SCCSEEEECCCCCCCBCTTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC-----------
T ss_pred             CCCCEEEECCCcCCCcchhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhccC-----------
Confidence             78999999987542      12233 37899999999988887653    34 579999999766521           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .++...|+.+|...+.+++.++.++   |+++++++||.+.++........    ...     ......
T Consensus       169 -----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----~~~-----~~~~~~  228 (269)
T 3gk3_A          169 -----------AFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQD----VLE-----AKILPQ  228 (269)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC----------------CCSGGG
T ss_pred             -----------CCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchh----HHH-----HHhhhc
Confidence                       1335679999999999999888764   89999999999998764321110    000     000111


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .....+..++|+|+++++++....   .+..++++|.
T Consensus       229 ~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG  265 (269)
T 3gk3_A          229 IPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGG  265 (269)
T ss_dssp             CTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTT
T ss_pred             CCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCC
Confidence            111367899999999999997653   2446777553

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.91  E-value=9.2e-24  Score=179.97  Aligned_cols=220  Identities=15%  Similarity=0.120  Sum_probs=154.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++|+..........+....  ..++.++.+|++|++++.++++       
T Consensus        27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT--GRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999993222122222221100  2478999999999998887765       


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|++|||||....      +.+++. ..+++|+.++.++++++..    .+ ..+||++||...+..            
T Consensus       105 ~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~------------  170 (277)
T 4fc7_A          105 RIDILINCAAGNFLCPAGALSFNAFK-TVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRG------------  170 (277)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHHT------------
T ss_pred             CCCEEEECCcCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCC------------
Confidence            68999999986432      223344 8899999999999988743    22 469999999876521            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                .+....|+.+|...+.+.+.++.++   |++++.++||.+.++.........-.........  .+.   
T Consensus       171 ----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~--~p~---  235 (277)
T 4fc7_A          171 ----------QALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTA--SPL---  235 (277)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHT--STT---
T ss_pred             ----------CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhcc--CCC---
Confidence                      1235679999999999999988775   8999999999999873111000000011111111  111   


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          225 LNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                        ..+..++|+|+++++++....   .|.+++++|.
T Consensus       236 --~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG  269 (277)
T 4fc7_A          236 --QRLGNKTEIAHSVLYLASPLASYVTGAVLVADGG  269 (277)
T ss_dssp             --SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCC
Confidence              268899999999999997532   2446667554

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.91  E-value=3.6e-24  Score=183.98  Aligned_cols=218  Identities=14%  Similarity=0.086  Sum_probs=155.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCC-CCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDP-EHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++|+.. .....+......  ...++.++.+|++|.+++.++++      
T Consensus        49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE--CGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH--TTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHH--cCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999988322 112222211111  12578999999999998877664      


Q ss_pred             -CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 -GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 -~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                       ++|++||+||....       +.+++. ..+++|+.++.++++++...- ...+||++||...+..             
T Consensus       127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~-------------  192 (294)
T 3r3s_A          127 GGLDILALVAGKQTAIPEIKDLTSEQFQ-QTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQP-------------  192 (294)
T ss_dssp             TCCCEEEECCCCCCCCSSGGGCCHHHHH-HHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSC-------------
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccC-------------
Confidence             68999999996431       223344 889999999999999998764 1349999999877631             


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC--CCchHHHHHHHHhCCcccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPK--FAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~  223 (327)
                               .+....|+.+|...+.+.+.++.++   |++++.++||.|+++.....  .......     .....+.  
T Consensus       193 ---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~-----~~~~~p~--  256 (294)
T 3r3s_A          193 ---------SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQ-----FGQQTPM--  256 (294)
T ss_dssp             ---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTT-----TTTTSTT--
T ss_pred             ---------CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHH-----HHhcCCC--
Confidence                     1335679999999999999998875   89999999999998741110  0000000     0011111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                         ..+..++|+|+++++++....   .+.+++++|.
T Consensus       257 ---~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  290 (294)
T 3r3s_A          257 ---KRAGQPAELAPVYVYLASQESSYVTAEVHGVCGG  290 (294)
T ss_dssp             ---SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence               368899999999999987543   2446777553

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.91  E-value=6.9e-23  Score=176.11  Aligned_cols=218  Identities=14%  Similarity=-0.014  Sum_probs=157.0

Q ss_pred             CCeEEEeCCcc--hhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGTG--FIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +|++|||||+|  +||.+++++|+++|++|++++| +......+..+...   .+++.++.+|++|++++.++++     
T Consensus        30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (296)
T 3k31_A           30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYL-SETFKKRVDPLAES---LGVKLTVPCDVSDAESVDNMFKVLAEE  105 (296)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHHHH---HTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHh---cCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            57899999997  9999999999999999999999 44333333332211   1356889999999998887765     


Q ss_pred             --CCCEEEEccCCCC----------CCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCccc
Q 020334           78 --GCAGVIHVAAPID----------IDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 --~~d~vih~a~~~~----------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        ++|++|||||...          .+.+++. ..+++|+.++..+++++...- ...+||++||...+..         
T Consensus       106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~---------  175 (296)
T 3k31_A          106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFL-TSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKV---------  175 (296)
T ss_dssp             HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC---------
T ss_pred             cCCCCEEEECCCcCCcccccCChhhCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccC---------
Confidence              6899999998753          1223344 889999999999999988653 1359999999776521         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .+....|+.+|...+.+.+.++.++   |++++.++||.+.++..... . ........... ..+.
T Consensus       176 -------------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~-~~~~~~~~~~~-~~p~  239 (296)
T 3k31_A          176 -------------VPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI-S-DFHYILTWNKY-NSPL  239 (296)
T ss_dssp             -------------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC-H-HHHHHHHHHHH-HSTT
T ss_pred             -------------CCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc-c-chHHHHHHHHh-cCCC
Confidence                         1234579999999999999988775   89999999999999864321 1 11111111111 1111


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                           ..+..++|+|+++++++....   .|..++++|.
T Consensus       240 -----~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  273 (296)
T 3k31_A          240 -----RRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCG  273 (296)
T ss_dssp             -----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCCCCHHHHHHHHHHHcCCccCCccCCEEEECCC
Confidence                 257899999999999997532   2446677554

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.91  E-value=1.9e-23  Score=177.54  Aligned_cols=228  Identities=16%  Similarity=0.055  Sum_probs=158.0

Q ss_pred             CCCeEEEeCCc--chhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            4 QKGKVCVTGGT--GFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         4 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      ..|+||||||+  |+||.+++++|+++|++|++++| +......+..+...   .+++.++.+|++|++++.++++    
T Consensus        13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYV-GDRFKDRITEFAAE---FGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEec-chhhHHHHHHHHHH---cCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            36899999999  99999999999999999999999 44333334333222   2357899999999998887775    


Q ss_pred             ---CCCEEEEccCCCCC----------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcc
Q 020334           78 ---GCAGVIHVAAPIDI----------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ---~~d~vih~a~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                         ++|++|||||....          ...+.....+++|+.++..+++++.+.- +..++|++||...+..        
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~--------  160 (271)
T 3ek2_A           89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA--------  160 (271)
T ss_dssp             HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB--------
T ss_pred             HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC--------
Confidence               57999999986531          1122234789999999999999987652 1358999999876531        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    .++...|+.+|...+.+.+.++.++   |+++++++||.+.++.....  ............ ..+
T Consensus       161 --------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~-~~~  223 (271)
T 3ek2_A          161 --------------IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI--KSFGKILDFVES-NSP  223 (271)
T ss_dssp             --------------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC--HHHHHHHHHHHH-HST
T ss_pred             --------------CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc--cchHHHHHHHHh-cCC
Confidence                          1234579999999999999988765   89999999999998754321  111111111111 111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC--C-CceEEEec-cccCHHHHH
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD--A-KGRYICSS-AKLTIQEMA  265 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~-~~~s~~e~~  265 (327)
                      .     ..+..++|+|+++++++....  . +..+++++ ...++.+++
T Consensus       224 ~-----~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~  267 (271)
T 3ek2_A          224 L-----KRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMA  267 (271)
T ss_dssp             T-----SSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC-
T ss_pred             c-----CCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhh
Confidence            1     257899999999999997532  2 44667754 455555544

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.91  E-value=3.6e-23  Score=171.92  Aligned_cols=196  Identities=19%  Similarity=0.139  Sum_probs=144.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| +...........     ..++.++.+|++|++++.++++       
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   76 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGR-RYQRLQQQELLL-----GNAVIGIVADLAHHEDVDVAFAAAVEWGG   76 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHH-----GGGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHh-----cCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            689999999999999999999999999999999 433322222111     1258899999999998887665       


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                      ++|++||+||....      +.+++. ..+++|+.++..+++++...  .+..++|++||...+..              
T Consensus        77 ~id~lvnnAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~--------------  141 (235)
T 3l6e_A           77 LPELVLHCAGTGEFGPVGVYTAEQIR-RVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVG--------------  141 (235)
T ss_dssp             SCSEEEEECCCC------CCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSS--------------
T ss_pred             CCcEEEECCCCCCCCChHhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCC--------------
Confidence            68999999997432      223344 78999999998888877542  11249999999776531              


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                              .+....|+.||...+.+.+.++.++   |++++.++||.+..+..... ..           .  ..     
T Consensus       142 --------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~-----------~--~~-----  194 (235)
T 3l6e_A          142 --------KANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT-DH-----------V--DP-----  194 (235)
T ss_dssp             --------CSSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------------
T ss_pred             --------CCCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc-CC-----------C--CC-----
Confidence                    1234679999999999999998864   79999999999977642210 00           0  00     


Q ss_pred             CCeeeHHHHHHHHHHhhcCCCC
Q 020334          227 ISMVHIDDVARAHIFLLEYPDA  248 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~~~  248 (327)
                      ..++.++|+|+++++++..+..
T Consensus       195 ~~~~~pedvA~~v~~l~~~~~~  216 (235)
T 3l6e_A          195 SGFMTPEDAAAYMLDALEARSS  216 (235)
T ss_dssp             --CBCHHHHHHHHHHHTCCCSS
T ss_pred             cCCCCHHHHHHHHHHHHhCCCC
Confidence            1578999999999999987643

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.91  E-value=3.9e-23  Score=173.15  Aligned_cols=208  Identities=19%  Similarity=0.168  Sum_probs=148.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      ++|++|||||+|+||.+++++|+++|++|++++| +++....+ ..+...   ..++.++.+|++|++++.++++     
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~   81 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAAR-RVEKLRALGDELTAA---GAKVHVLELDVADRQGVDAAVASTVEA   81 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc---CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 43322221 222211   2468899999999998887764     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                        ++|++||+||....      +.+++ ...+++|+.++.++++++.+.-  +..+||++||...+..            
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------  148 (247)
T 2jah_A           82 LGGLDILVNNAGIMLLGPVEDADTTDW-TRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVN------------  148 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCSTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCC------------
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCC------------
Confidence              68999999986532      12233 3789999999999988876431  0169999999765521            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                .++...|+.+|...+.+.+.++.++   |+++++++||.+.++.................       +  
T Consensus       149 ----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-------~--  209 (247)
T 2jah_A          149 ----------VRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQR-------I--  209 (247)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHH-------T--
T ss_pred             ----------CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhc-------c--
Confidence                      1234579999999999999888764   89999999999988753221111111111111       0  


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCC
Q 020334          225 LNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                      +...++.++|+|+++++++..+.
T Consensus       210 ~~~~~~~pedvA~~v~~l~s~~~  232 (247)
T 2jah_A          210 SQIRKLQAQDIAEAVRYAVTAPH  232 (247)
T ss_dssp             TTSCCBCHHHHHHHHHHHHHSCT
T ss_pred             cccCCCCHHHHHHHHHHHhCCCc
Confidence            11125899999999999998653

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.91  E-value=3e-23  Score=175.81  Aligned_cols=218  Identities=15%  Similarity=0.131  Sum_probs=151.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhh-hCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFL-TNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++| +....... ..+ ...   ..++.++.+|++|++++.++++    
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASR-NLEEASEAAQKLTEKY---GVETMAFRCDVSNYEEVKKLLEAVKE   95 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHHH---CCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHhc---CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999 43222211 111 110   2467889999999998887765    


Q ss_pred             ---CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccce-eeeecCCCCCcc
Q 020334           78 ---GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGS-TVYFSGKDVDML  143 (327)
Q Consensus        78 ---~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~-v~~~~~~~~~~~  143 (327)
                         ++|++||+||.....      .+++. ..+++|+.++.++++++.    +.+ .++||++||.. ... +       
T Consensus        96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~-~-------  165 (267)
T 1vl8_A           96 KFGKLDTVVNAAGINRRHPAEEFPLDEFR-QVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEV-T-------  165 (267)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCC-C-------
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhcc-C-------
Confidence               689999999975421      12333 788999999999888764    333 67999999976 221 0       


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    .++...|+.+|...+.+++.++.++   |+++++++||.+.++........  .......... .+
T Consensus       166 --------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~-~p  228 (267)
T 1vl8_A          166 --------------MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD--PEKLDYMLKR-IP  228 (267)
T ss_dssp             --------------SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC--HHHHHHHHHT-CT
T ss_pred             --------------CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccC--hHHHHHHHhh-CC
Confidence                          1235679999999999999988764   89999999999988742110000  0111111111 11


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC--C-CceEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD--A-KGRYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~~  257 (327)
                      .     ..++.++|+|+++++++....  . +..+.+.|.
T Consensus       229 ~-----~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  263 (267)
T 1vl8_A          229 L-----GRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG  263 (267)
T ss_dssp             T-----SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C-----CCCcCHHHHHHHHHHHcCccccCCcCCeEEECCC
Confidence            1     258899999999999987532  2 335566544

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.91  E-value=1.5e-23  Score=178.71  Aligned_cols=227  Identities=15%  Similarity=0.112  Sum_probs=155.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCC---------CCcchhhhhhC-CCCCCCCeEEEeCCCCChhHHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDP---------EHKKDLSFLTN-LPGASERLQIFNADLNDPESFDA   74 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~   74 (327)
                      +|++|||||+|+||.+++++|+++|++|++++|+..         .....+..... ......++.++.+|++|.+++.+
T Consensus        11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (277)
T 3tsc_A           11 GRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRK   90 (277)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            578999999999999999999999999999998311         01122211110 00113578999999999998887


Q ss_pred             Hhc-------CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecC
Q 020334           75 AIA-------GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSG  137 (327)
Q Consensus        75 ~~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~  137 (327)
                      +++       ++|++||+||....      +.+++. ..+++|+.++.++++++..    .++..+||++||...+..  
T Consensus        91 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--  167 (277)
T 3tsc_A           91 VVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFR-DVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM--  167 (277)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC--
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC--
Confidence            764       58999999997542      223344 7899999999998887543    222469999999876521  


Q ss_pred             CCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHH
Q 020334          138 KDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV  214 (327)
Q Consensus       138 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~  214 (327)
                                          .+....|+.+|...+.+.+.++.++   |++++.++||.+.+|....   ..........
T Consensus       168 --------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~~  224 (277)
T 3tsc_A          168 --------------------QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG---DMVTAVGQAM  224 (277)
T ss_dssp             --------------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH---HHHHHHHHHH
T ss_pred             --------------------CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc---hhhhhhhhcc
Confidence                                1335679999999999999998775   8999999999999875321   1111111111


Q ss_pred             hCCccc---cccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          215 LGNREE---YSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       215 ~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ...+..   +.......+.+++|+|+++++++....   .+..+++.|.
T Consensus       225 ~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  273 (277)
T 3tsc_A          225 ETNPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQG  273 (277)
T ss_dssp             HTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccHHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCC
Confidence            111110   111111248899999999999997643   2346667654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.91  E-value=1.2e-23  Score=182.73  Aligned_cols=217  Identities=14%  Similarity=0.074  Sum_probs=141.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++||||||+|+||.+++++|+++|++|++++| +....... ..+... ....++.++.+|++|++++.++++      
T Consensus         8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (319)
T 3ioy_A            8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADI-RQDSIDKALATLEAE-GSGPEVMGVQLDVASREGFKMAADEVEARF   85 (319)
T ss_dssp             TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH-TCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc-CCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence            568999999999999999999999999999999 43332222 222211 111278999999999998887765      


Q ss_pred             -CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhcC---------CccEEEEeccceeeeecCCCCCc
Q 020334           78 -GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKSG---------TVKRFVYTSSGSTVYFSGKDVDM  142 (327)
Q Consensus        78 -~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~---------~~~~~v~~SS~~v~~~~~~~~~~  142 (327)
                       ++|+|||+||.....     ..+.....+++|+.++.++++++....         ...+||++||...+..       
T Consensus        86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~-------  158 (319)
T 3ioy_A           86 GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA-------  158 (319)
T ss_dssp             CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC-------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC-------
Confidence             579999999965421     112233789999999999988776532         1457999999876631       


Q ss_pred             ccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC--CchHHHHHHHHhCC
Q 020334          143 LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKF--AGSVRSTLAMVLGN  217 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~--~~~~~~~~~~~~~~  217 (327)
                                     .+....|+.||...+.+.+.++.+   .|+++++++||.|.++......  +..+......... 
T Consensus       159 ---------------~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-  222 (319)
T 3ioy_A          159 ---------------AGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDK-  222 (319)
T ss_dssp             ---------------CSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC------------------------
T ss_pred             ---------------CCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhH-
Confidence                           122457999999777777776654   3899999999999987543211  1111000000000 


Q ss_pred             ccccccccC--CCeeeHHHHHHHHHHhhcCCC
Q 020334          218 REEYSILLN--ISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       218 ~~~~~~~~~--~~~i~v~D~a~~~~~~~~~~~  247 (327)
                       ........  ...+.++|+|++++.+++++.
T Consensus       223 -~~~~~~~~~~~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          223 -TAVERLAGVHEFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             -------CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred             -HHHHHHHHhhhcCCCHHHHHHHHHHHHHcCC
Confidence             00000000  123799999999999998853

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.91  E-value=1.5e-23  Score=178.24  Aligned_cols=220  Identities=15%  Similarity=0.041  Sum_probs=154.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++|+..........+...   ..++.++.+|++|.+++.++++      
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~g  108 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS---GGTAQELAGDLSEAGAGTDLIERAEAIA  108 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT---TCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            3688999999999999999999999999999999433322222333221   3578999999999988887765      


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|++||+||....      +.+++. ..+++|+.++.++++++.    +.+ ..+||++||...+..            
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~------------  174 (275)
T 4imr_A          109 PVDILVINASAQINATLSALTPNDLA-FQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLRP------------  174 (275)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCC------------
Confidence            68999999996432      222333 789999999999988874    334 579999999776520            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                ..+...|+.||...+.+.+.++.++   |++++.++||.+.++....... ..............+.   
T Consensus       175 ----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~p~---  240 (275)
T 4imr_A          175 ----------KSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRA-QDPEGWDEYVRTLNWM---  240 (275)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHH-HCHHHHHHHHHHHSTT---
T ss_pred             ----------CCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccc-cChHHHHHHHhhcCcc---
Confidence                      1335579999999999999998775   8999999999998863211000 0000011100000011   


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCC---CCceEEEec
Q 020334          225 LNISMVHIDDVARAHIFLLEYPD---AKGRYICSS  256 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~  256 (327)
                        ..+..++|+|+++++++....   .|..++++|
T Consensus       241 --~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG  273 (275)
T 4imr_A          241 --GRAGRPEEMVGAALFLASEACSFMTGETIFLTG  273 (275)
T ss_dssp             --CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             --CCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCC
Confidence              157789999999999997643   234566654

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.91  E-value=2.3e-23  Score=175.80  Aligned_cols=207  Identities=15%  Similarity=0.135  Sum_probs=144.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      ++|++|||||+|+||.+++++|+++|++|++++| +.+....+ ..+...   ..++.++.+|++|++++.++++     
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   78 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGAR-RQARIEAIATEIRDA---GGTALAQVLDVTDRHSVAAFAQAAVDT   78 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999 43322222 222221   2468889999999998887764     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++|||||....      +.+++. ..+++|+.++..+++++..    .+ ..+||++||...+..          
T Consensus        79 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~----------  146 (264)
T 3tfo_A           79 WGRIDVLVNNAGVMPLSPLAAVKVDEWE-RMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSV----------  146 (264)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCC----------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHccc----------
Confidence              68999999997542      223344 7899999999888777643    34 579999999876531          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc-CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH-GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                  .+....|+.+|...+.+.+.++.++ |++++.++||.+.++..............      . ..   
T Consensus       147 ------------~~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~------~-~~---  204 (264)
T 3tfo_A          147 ------------VPTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEETMAAM------D-TY---  204 (264)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC------------------------------
T ss_pred             ------------CCCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccchhHHHHH------H-hh---
Confidence                        1234579999999999999998876 89999999999988753221000000000      0 00   


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCCCC
Q 020334          225 LNISMVHIDDVARAHIFLLEYPDAK  249 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~~~  249 (327)
                       ...+..++|+|++++++++.+...
T Consensus       205 -~~~~~~pedvA~~v~~l~s~~~~~  228 (264)
T 3tfo_A          205 -RAIALQPADIARAVRQVIEAPQSV  228 (264)
T ss_dssp             ----CCCHHHHHHHHHHHHHSCTTE
T ss_pred             -hccCCCHHHHHHHHHHHhcCCccC
Confidence             012578999999999999987653

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.91  E-value=5.1e-24  Score=179.98  Aligned_cols=222  Identities=11%  Similarity=0.104  Sum_probs=149.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhC-CCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTN-LPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| .......+..+.. ......++.++.+|++|++++.++++      
T Consensus        11 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           11 NKVIVIAGGIKNLGALTAKTFALESVNLVLHYH-QAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHTTSSCEEEEEES-CGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEec-CccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999988 3322222222111 11113578999999999998887775      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                       ++|++|||||....      +.+++. ..+++|+.++..+++++.+.- +..++|++||...+...             
T Consensus        90 g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~-------------  155 (262)
T 3ksu_A           90 GKVDIAINTVGKVLKKPIVETSEAEFD-AMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYT-------------  155 (262)
T ss_dssp             CSEEEEEECCCCCCSSCGGGCCHHHHH-HHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHH-------------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCC-------------
Confidence             68999999996542      222333 788999999999999998741 14699999998765311             


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                               +....|+.+|...+.+.+.++.++   |++++.++||.+..+..........   ... .....+.     
T Consensus       156 ---------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~---~~~-~~~~~~~-----  217 (262)
T 3ksu_A          156 ---------GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKES---TAF-HKSQAMG-----  217 (262)
T ss_dssp             ---------CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC----------------CC-----
T ss_pred             ---------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHH---HHH-HHhcCcc-----
Confidence                     224469999999999999999876   8999999999987763211111100   000 0001111     


Q ss_pred             CCeeeHHHHHHHHHHhhcCCC-C-CceEEEecccc
Q 020334          227 ISMVHIDDVARAHIFLLEYPD-A-KGRYICSSAKL  259 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~~-~-~~~y~~~~~~~  259 (327)
                      ..+..++|+|+++++++.... . |..+++.|...
T Consensus       218 ~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg~~  252 (262)
T 3ksu_A          218 NQLTKIEDIAPIIKFLTTDGWWINGQTIFANGGYT  252 (262)
T ss_dssp             CCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTTCC
T ss_pred             cCCCCHHHHHHHHHHHcCCCCCccCCEEEECCCcc
Confidence            257889999999999997621 2 33566766543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.91  E-value=1.6e-23  Score=176.72  Aligned_cols=227  Identities=12%  Similarity=0.040  Sum_probs=143.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC----CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG----CA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----~d   80 (327)
                      ||+||||||+|+||.+++++|+++|++|++++| ++....            .  . +.+|++|.+++.+++++    +|
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~~~------------~--~-~~~Dl~~~~~v~~~~~~~~~~id   64 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDI-RDAEVI------------A--D-LSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SSSSEE------------C--C-TTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-Cchhhc------------c--c-cccCCCCHHHHHHHHHHhCCCCC
Confidence            468999999999999999999999999999999 433221            0  1 56899999999888864    59


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCC---CCCcccCCCCCChhH
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGK---DVDMLDETFWSDEDY  153 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~---~~~~~~E~~~~~~~~  153 (327)
                      ++||+||.... ...+. ..+++|+.++.++++++.+    .+ .++||++||...+.....   ....+.+.++.....
T Consensus        65 ~lv~~Ag~~~~-~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (257)
T 1fjh_A           65 GLVLCAGLGPQ-TKVLG-NVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARA  141 (257)
T ss_dssp             EEEECCCCCTT-CSSHH-HHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHH
T ss_pred             EEEECCCCCCC-cccHH-HHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhhcccchhhhhh
Confidence            99999997541 12344 8999999999999888763    33 579999999887621100   000011111000000


Q ss_pred             -hh--hcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCC
Q 020334          154 -IR--KLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNI  227 (327)
Q Consensus       154 -~~--~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (327)
                       ..  ...++...|+.||...+.+++.++.+   .|+++++++||.+.++...........  .........+.     .
T Consensus       142 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~~~~~~-----~  214 (257)
T 1fjh_A          142 IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRY--GESIAKFVPPM-----G  214 (257)
T ss_dssp             HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CCCST-----T
T ss_pred             hhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhH--HHHHHhccccc-----C
Confidence             00  00123568999999999999988776   489999999999998853321010000  00000001111     2


Q ss_pred             CeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          228 SMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       228 ~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      .+.+++|+|+++++++..+.  ..| .+++.+.
T Consensus       215 ~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG  247 (257)
T 1fjh_A          215 RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence            58899999999999997652  234 5566554

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.91  E-value=6e-23  Score=174.12  Aligned_cols=208  Identities=18%  Similarity=0.178  Sum_probs=153.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC---CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG---YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      .+++||||||+|+||++++++|+++|   ++|++++| +......+..+...   ..++.++.+|++|.+++.++++   
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r-~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~   95 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCR-NREQAKELEDLAKN---HSNIHILEIDLRNFDAYDKLVADIE   95 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEES-CTTSCHHHHHHHHH---CTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEec-ChhhhHHHHHhhcc---CCceEEEEecCCChHHHHHHHHHHH
Confidence            46899999999999999999999999   99999999 44433333333221   2478999999999998888776   


Q ss_pred             ------CCCEEEEccCCCC-CC-----CCchHHHHHHHHHhHHHHHHHHHHhc----------CC----ccEEEEeccce
Q 020334           78 ------GCAGVIHVAAPID-ID-----GKETEEVMTQRAVNGTIGILKSCLKS----------GT----VKRFVYTSSGS  131 (327)
Q Consensus        78 ------~~d~vih~a~~~~-~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~----~~~~v~~SS~~  131 (327)
                            ++|+||||||... ..     ..+.....+++|+.++.++++++.+.          +.    .++||++||..
T Consensus        96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  175 (267)
T 1sny_A           96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL  175 (267)
T ss_dssp             HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred             HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence                  6999999999654 11     11222378999999999999887653          10    36899999987


Q ss_pred             eeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHH
Q 020334          132 TVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVR  208 (327)
Q Consensus       132 v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~  208 (327)
                      .+....        .           ..+...|+.+|...+.+++.++.+   .+++++++||+.+..+....       
T Consensus       176 ~~~~~~--------~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------  229 (267)
T 1sny_A          176 GSIQGN--------T-----------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-------  229 (267)
T ss_dssp             GCSTTC--------C-----------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-------
T ss_pred             ccccCC--------C-----------CCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-------
Confidence            763110        0           123567999999999999998877   48999999999998764211       


Q ss_pred             HHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCceEE-Eecccc
Q 020334          209 STLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKGRYI-CSSAKL  259 (327)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~y~-~~~~~~  259 (327)
                                        ..++.++|+|+.++.++....  ..|.|. ..+..+
T Consensus       230 ------------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  265 (267)
T 1sny_A          230 ------------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL  265 (267)
T ss_dssp             ------------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred             ------------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCc
Confidence                              035678999999999987542  345454 444433

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.91  E-value=7.3e-23  Score=170.69  Aligned_cols=212  Identities=20%  Similarity=0.202  Sum_probs=149.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      |+|++|||||+|+||++++++|+++|++|++++| ++..  ....+        ++.++.+|++| +++.++++      
T Consensus         1 ~~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r-~~~~--~~~~~--------~~~~~~~D~~~-~~~~~~~~~~~~~~   68 (239)
T 2ekp_A            1 MERKALVTGGSRGIGRAIAEALVARGYRVAIASR-NPEE--AAQSL--------GAVPLPTDLEK-DDPKGLVKRALEAL   68 (239)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SCHH--HHHHH--------TCEEEECCTTT-SCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHH--HHHhh--------CcEEEecCCch-HHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999 4322  11111        26788999998 76655443      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++||+||....      +.+++. ..+++|+.++..+++++.    +.+ .+++|++||...+...  .       
T Consensus        69 g~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~--~-------  137 (239)
T 2ekp_A           69 GGLHVLVHAAAVNVRKPALELSYEEWR-RVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAG--G-------  137 (239)
T ss_dssp             TSCCEEEECCCCCCCCCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC--T-------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCC--C-------
Confidence             78999999986432      222343 789999999988888774    334 6899999998766311  0       


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .++...|+.+|...+.+.+.++.++   |++++++||+.+.++..... .. .......... ..+.  
T Consensus       138 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~-~~~~~~~~~~-~~p~--  201 (239)
T 2ekp_A          138 -----------PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPL-RQ-NPELYEPITA-RIPM--  201 (239)
T ss_dssp             -----------TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-HT-CHHHHHHHHT-TCTT--
T ss_pred             -----------CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcc-cc-CHHHHHHHHh-cCCC--
Confidence                       1335679999999999999988775   89999999999998752210 00 0111111111 1111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                         ..+..++|+|+++++++....  ..| .+++.|.
T Consensus       202 ---~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  235 (239)
T 2ekp_A          202 ---GRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGG  235 (239)
T ss_dssp             ---SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ---CCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCC
Confidence               258899999999999987532  234 5566554

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.91  E-value=2.5e-23  Score=176.57  Aligned_cols=204  Identities=15%  Similarity=0.111  Sum_probs=142.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| +.+..... ..+      ..++.++.+|++|++++.++++      
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  100 (272)
T 4dyv_A           28 KKIAIVTGAGSGVGRAVAVALAGAGYGVALAGR-RLDALQETAAEI------GDDALCVPTDVTDPDSVRALFTATVEKF  100 (272)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHH------TSCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHh------CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999 43222222 111      1478999999999998888775      


Q ss_pred             -CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHHhc----C-CccEEEEeccceeeeecCCCCCccc
Q 020334           78 -GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCLKS----G-TVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 -~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                       ++|++|||||....       +.+++. ..+++|+.++..+++++.+.    + +..+||++||...+..         
T Consensus       101 g~iD~lVnnAg~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~---------  170 (272)
T 4dyv_A          101 GRVDVLFNNAGTGAPAIPMEDLTFAQWK-QVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP---------  170 (272)
T ss_dssp             SCCCEEEECCCCCCCSSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSC---------
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHH-HHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCC---------
Confidence             79999999997432       122333 88999999988888766543    1 1369999999776521         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .++...|+.+|...+.+.+.++.++   ++++..++||.+.++........ ..   .. . .... 
T Consensus       171 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~---~~-~-~~~~-  230 (272)
T 4dyv_A          171 -------------RPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG-VP---QA-D-LSIK-  230 (272)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc-ch---hh-h-hccc-
Confidence                         1335679999999999999988774   89999999999988753221000 00   00 0 0011 


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCCCC
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPDAK  249 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~  249 (327)
                          ...++.++|+|+++++++..+...
T Consensus       231 ----~~~~~~pedvA~~v~fL~s~~~~~  254 (272)
T 4dyv_A          231 ----VEPVMDVAHVASAVVYMASLPLDA  254 (272)
T ss_dssp             ---------CHHHHHHHHHHHHHSCTTS
T ss_pred             ----ccCCCCHHHHHHHHHHHhCCCCcC
Confidence                125889999999999999987654

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.91  E-value=1.7e-22  Score=172.40  Aligned_cols=218  Identities=11%  Similarity=-0.009  Sum_probs=156.5

Q ss_pred             CCeEEEeCCcch--hHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGTGF--IGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +|++|||||+|+  ||.+++++|+++|++|++++| +. ....+..+...   ..++.++.+|++|.+++.++++     
T Consensus        26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r-~~-~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYV-GQ-FKDRVEKLCAE---FNPAAVLPCDVISDQEIKDLFVELGKV  100 (280)
T ss_dssp             TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEEC-TT-CHHHHHHHHGG---GCCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeC-ch-HHHHHHHHHHh---cCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            578999999977  999999999999999999999 43 33333333222   2458899999999998887764     


Q ss_pred             --CCCEEEEccCCCCC----------CCCchHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCCCcc
Q 020334           78 --GCAGVIHVAAPIDI----------DGKETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 --~~d~vih~a~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                        ++|++|||||....          ...+.....+++|+.++.++++++...-  +..+||++||...+..        
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~--------  172 (280)
T 3nrc_A          101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKA--------  172 (280)
T ss_dssp             CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSC--------
T ss_pred             cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccC--------
Confidence              57999999997542          1222233789999999999999887541  2469999999876521        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    .++...|+.+|...+.+.+.++.+   .|++++.++||.+.++..... .. .......... ..+
T Consensus       173 --------------~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~-~~~~~~~~~~-~~p  235 (280)
T 3nrc_A          173 --------------MPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGI-SN-FKKMLDYNAM-VSP  235 (280)
T ss_dssp             --------------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGC-TT-HHHHHHHHHH-HST
T ss_pred             --------------CCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcC-cc-hHHHHHHHHh-cCC
Confidence                          133567999999999999998876   489999999999999864321 11 1111111111 111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      .     ..+..++|+|+++++++....   .+.++++++.
T Consensus       236 ~-----~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG  270 (280)
T 3nrc_A          236 L-----KKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAG  270 (280)
T ss_dssp             T-----CSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             C-----CCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCC
Confidence            1     257899999999999997542   2446677554

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.91  E-value=3.1e-23  Score=175.32  Aligned_cols=198  Identities=18%  Similarity=0.149  Sum_probs=143.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ++++|||||+|+||.+++++|+++|++|++++| +....... ..+...   ..++.++.+|++|.+++.++++      
T Consensus        29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTAR-DVEKLRAVEREIVAA---GGEAESHACDLSHSDAIAAFATGVLAAH  104 (262)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999999 43332222 222221   2578999999999998887664      


Q ss_pred             -CCCEEEEccCCCC-------CCCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 -GCAGVIHVAAPID-------IDGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 -~~d~vih~a~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                       ++|+|||+||...       ...+++ ...+++|+.++.++++++..    .+ ..+||++||...+..          
T Consensus       105 g~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~----------  172 (262)
T 3rkr_A          105 GRCDVLVNNAGVGWFGGPLHTMKPAEW-DALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNP----------  172 (262)
T ss_dssp             SCCSEEEECCCCCCCSSCGGGSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSCC----------
T ss_pred             CCCCEEEECCCccCCCCCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCC----------
Confidence             5899999999622       122233 37899999999998887654    33 579999999876521          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .++...|+.+|...+.+++.++.+   .|+++++++||.+..+......            .. ..  
T Consensus       173 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~------------~~-~~--  225 (262)
T 3rkr_A          173 ------------VADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS------------AK-KS--  225 (262)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc------------cc-cc--
Confidence                        133567999999999999998876   4899999999999876422100            00 00  


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCCC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPDA  248 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~~  248 (327)
                         ...++.++|+|+++++++.....
T Consensus       226 ---~~~~~~p~dvA~~v~~l~s~~~~  248 (262)
T 3rkr_A          226 ---ALGAIEPDDIADVVALLATQADQ  248 (262)
T ss_dssp             ------CCCHHHHHHHHHHHHTCCTT
T ss_pred             ---cccCCCHHHHHHHHHHHhcCccc
Confidence               12578999999999999987543

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.91  E-value=2.9e-22  Score=171.60  Aligned_cols=224  Identities=17%  Similarity=0.138  Sum_probs=155.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC------------CcchhhhhhC-CCCCCCCeEEEeCCCCChhH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE------------HKKDLSFLTN-LPGASERLQIFNADLNDPES   71 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~   71 (327)
                      +|++|||||+|+||.+++++|+++|++|++++|+.+.            ....+..+.. ......++.++.+|++|+++
T Consensus        11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   90 (286)
T 3uve_A           11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDA   90 (286)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHH
Confidence            5789999999999999999999999999999994221            1112211110 01113578999999999998


Q ss_pred             HHHHhc-------CCCEEEEccCCCCCC-------CCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceee
Q 020334           72 FDAAIA-------GCAGVIHVAAPIDID-------GKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTV  133 (327)
Q Consensus        72 ~~~~~~-------~~d~vih~a~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~  133 (327)
                      +.++++       ++|++|||||.....       .+++. ..+++|+.++.++++++...    ++..+||++||...+
T Consensus        91 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  169 (286)
T 3uve_A           91 LKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWT-EMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGL  169 (286)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhc
Confidence            887765       689999999964422       22343 78999999999998877643    224699999998765


Q ss_pred             eecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC-------
Q 020334          134 YFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKF-------  203 (327)
Q Consensus       134 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~-------  203 (327)
                      ..                      .+....|+.+|...+.+.+.++.+   .|++++.++||.+.+|......       
T Consensus       170 ~~----------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~  227 (286)
T 3uve_A          170 KA----------------------YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRP  227 (286)
T ss_dssp             SC----------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCT
T ss_pred             cC----------------------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccc
Confidence            21                      123567999999999999999877   4899999999999988643200       


Q ss_pred             ---CchHHHHHHHH-hCCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          204 ---AGSVRSTLAMV-LGNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       204 ---~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                         ........... .....+      ..+.+++|+|+++++++....   .|..++++|.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~p------~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG  282 (286)
T 3uve_A          228 DLENPGPDDMAPICQMFHTLP------IPWVEPIDISNAVLFFASDEARYITGVTLPIDAG  282 (286)
T ss_dssp             TSSSCCHHHHHHHHHTTCSSS------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccccchhhHHHHHHhhhccC------CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCc
Confidence               00000000000 111111      368899999999999997543   2446677554

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.91  E-value=1.2e-23  Score=183.03  Aligned_cols=229  Identities=15%  Similarity=0.118  Sum_probs=162.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCC---------CCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSD---------PEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDA   74 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~   74 (327)
                      ++++|||||+|+||.++++.|+++|++|++++|+.         ...... ...+...   ..++.++.+|++|++++.+
T Consensus        27 gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           27 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA---GGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT---TCEEEEECCCTTSHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc---CCcEEEEECCCCCHHHHHH
Confidence            47899999999999999999999999999999841         111111 1222211   2468889999999998887


Q ss_pred             Hhc-------CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcC---------CccEEEEecccee
Q 020334           75 AIA-------GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSG---------TVKRFVYTSSGST  132 (327)
Q Consensus        75 ~~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~---------~~~~~v~~SS~~v  132 (327)
                      +++       ++|++|||||....      +.+++. ..+++|+.++..+++++...-         ...+||++||...
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~  182 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFD-AVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG  182 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH
Confidence            765       78999999997542      222344 789999999999988875431         0159999999876


Q ss_pred             eeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHH
Q 020334          133 VYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRS  209 (327)
Q Consensus       133 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~  209 (327)
                      +..                      .+....|+.||...+.+.+.++.+   .|++++.++|| +..+........... 
T Consensus       183 ~~~----------------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~-  238 (322)
T 3qlj_A          183 LQG----------------------SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA-  238 (322)
T ss_dssp             HHC----------------------BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC----
T ss_pred             ccC----------------------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh-
Confidence            521                      123567999999999999999887   48999999999 766543322221110 


Q ss_pred             HHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc------------------ccCHHHHHHHH
Q 020334          210 TLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA------------------KLTIQEMAEFL  268 (327)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~------------------~~s~~e~~~~i  268 (327)
                             ..     ...+.++.++|+|+++++++....   .+..++++|.                  ..++.|+++.+
T Consensus       239 -------~~-----~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~  306 (322)
T 3qlj_A          239 -------TQ-----DQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVV  306 (322)
T ss_dssp             -----------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHH
T ss_pred             -------cc-----ccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHH
Confidence                   00     011246789999999999987543   2445666443                  23789999999


Q ss_pred             HHhCC
Q 020334          269 SAKHP  273 (327)
Q Consensus       269 ~~~~~  273 (327)
                      .+.++
T Consensus       307 ~~~~~  311 (322)
T 3qlj_A          307 ADLLG  311 (322)
T ss_dssp             HHHHH
T ss_pred             HHHhh
Confidence            88776

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.91  E-value=4.7e-23  Score=172.83  Aligned_cols=208  Identities=14%  Similarity=0.054  Sum_probs=144.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCC-ChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN-DPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~~~d~v   82 (327)
                      .+|+||||||+|+||++++++|+++|++|++++| ++   .....+       .++.++ +|+. +.+.+.+.+.++|+|
T Consensus        18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r-~~---~~~~~~-------~~~~~~-~D~~~~~~~~~~~~~~iD~l   85 (249)
T 1o5i_A           18 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICAR-NE---ELLKRS-------GHRYVV-CDLRKDLDLLFEKVKEVDIL   85 (249)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CH---HHHHHT-------CSEEEE-CCTTTCHHHHHHHSCCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC-CH---HHHHhh-------CCeEEE-eeHHHHHHHHHHHhcCCCEE
Confidence            3688999999999999999999999999999999 43   222221       256667 9993 233333334489999


Q ss_pred             EEccCCCCC------CCCchHHHHHHHHHhHHHHHHH----HHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChh
Q 020334           83 IHVAAPIDI------DGKETEEVMTQRAVNGTIGILK----SCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDED  152 (327)
Q Consensus        83 ih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~----~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~  152 (327)
                      ||+||....      ..+++ ...+++|+.++..+.+    .+++.+ .++||++||...+..                 
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----------------  146 (249)
T 1o5i_A           86 VLNAGGPKAGFFDELTNEDF-KEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISP-----------------  146 (249)
T ss_dssp             EECCCCCCCBCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-----------------
T ss_pred             EECCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCC-----------------
Confidence            999986442      12233 3788999998766544    455555 689999999877631                 


Q ss_pred             HhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHH-HHhCCccccccccCCC
Q 020334          153 YIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLA-MVLGNREEYSILLNIS  228 (327)
Q Consensus       153 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  228 (327)
                           .++...|+.+|...+.+.+.++.+   .|+++++++||.++++........    ... .... ..+.     ..
T Consensus       147 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~~~~~~~~-~~p~-----~~  211 (249)
T 1o5i_A          147 -----IENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE----EKKKQVES-QIPM-----RR  211 (249)
T ss_dssp             -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH----HHHHHHHT-TSTT-----SS
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchh----hHHHHHHh-cCCC-----CC
Confidence                 123467999999999999998876   489999999999999853211011    111 1111 1111     26


Q ss_pred             eeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          229 MVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       229 ~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      +++++|+|+++++++....   .+..+++++.
T Consensus       212 ~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG  243 (249)
T 1o5i_A          212 MAKPEEIASVVAFLCSEKASYLTGQTIVVDGG  243 (249)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            8899999999999987532   2446677654

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.91  E-value=2.4e-22  Score=173.05  Aligned_cols=224  Identities=17%  Similarity=0.096  Sum_probs=155.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC--------Ccchhhhhh-CCCCCCCCeEEEeCCCCChhHHHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE--------HKKDLSFLT-NLPGASERLQIFNADLNDPESFDAA   75 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~   75 (327)
                      +|++|||||+|+||.++++.|+++|++|++++|+...        ....+.... .......++.++.+|++|++++.++
T Consensus        28 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  107 (299)
T 3t7c_A           28 GKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAA  107 (299)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            5789999999999999999999999999999994211        111111110 0001135789999999999988877


Q ss_pred             hc-------CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecC
Q 020334           76 IA-------GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSG  137 (327)
Q Consensus        76 ~~-------~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~  137 (327)
                      ++       ++|++|||||....       +.+++. ..+++|+.++..+++++...    +...+||++||...+..  
T Consensus       108 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~--  184 (299)
T 3t7c_A          108 VDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWR-DMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG--  184 (299)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC--
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC--
Confidence            65       68999999986542       122334 88999999999998886543    22579999999876521  


Q ss_pred             CCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC----------C
Q 020334          138 KDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKF----------A  204 (327)
Q Consensus       138 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~----------~  204 (327)
                                          .+....|+.+|...+.+.+.++.++   |++++.++||.|.+|......          .
T Consensus       185 --------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  244 (299)
T 3t7c_A          185 --------------------AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLEN  244 (299)
T ss_dssp             --------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSS
T ss_pred             --------------------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhcc
Confidence                                1235679999999999999998775   899999999999998643200          0


Q ss_pred             chHHHHHHH-HhCCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          205 GSVRSTLAM-VLGNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       205 ~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ......... ......+      ..+..++|+|+++++++....   .|..++++|.
T Consensus       245 ~~~~~~~~~~~~~~~~p------~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  295 (299)
T 3t7c_A          245 PTVEDFQVASRQMHVLP------IPYVEPADISNAILFLVSDDARYITGVSLPVDGG  295 (299)
T ss_dssp             CCHHHHHHHHHHHSSSS------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             chhhHHHHHhhhhcccC------cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCC
Confidence            001110000 0001111      258899999999999997643   2446677554

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.91  E-value=1.2e-22  Score=176.18  Aligned_cols=225  Identities=15%  Similarity=0.108  Sum_probs=154.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC--------CcchhhhhhC-CCCCCCCeEEEeCCCCChhHHHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE--------HKKDLSFLTN-LPGASERLQIFNADLNDPESFDAA   75 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~   75 (327)
                      +|++|||||+|+||.++++.|+++|++|++++|+...        ....+..... ......++.++.+|++|++++.++
T Consensus        46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  125 (317)
T 3oec_A           46 GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAV  125 (317)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            5789999999999999999999999999999984211        1111111100 001135789999999999988877


Q ss_pred             hc-------CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCC
Q 020334           76 IA-------GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGK  138 (327)
Q Consensus        76 ~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~  138 (327)
                      ++       ++|++|||||....      +.+++. ..+++|+.++..+++++...    +...+||++||...+..   
T Consensus       126 ~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~---  201 (317)
T 3oec_A          126 VDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWS-DILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG---  201 (317)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC---
Confidence            65       68999999997542      223344 78999999999988877542    22468999999876531   


Q ss_pred             CCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC---------C-Cc
Q 020334          139 DVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPK---------F-AG  205 (327)
Q Consensus       139 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~---------~-~~  205 (327)
                                         .+....|+.+|...+.+.+.++.++   |++++.++||.|.+|.....         . ..
T Consensus       202 -------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  262 (317)
T 3oec_A          202 -------------------APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENP  262 (317)
T ss_dssp             -------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSC
T ss_pred             -------------------CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhcccc
Confidence                               1235679999999999999998875   89999999999998742110         0 00


Q ss_pred             hHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          206 SVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ............. ..    ...+++++|+|+++++++....   .|.+++++|.
T Consensus       263 ~~~~~~~~~~~~~-~~----p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG  312 (317)
T 3oec_A          263 TREDAAELFSQLT-LL----PIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG  312 (317)
T ss_dssp             CHHHHHHHHTTTC-SS----SSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             chhHHHHHHhhhc-cC----CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcc
Confidence            0000000001110 00    1478999999999999987543   2446777654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.91  E-value=1.2e-22  Score=174.34  Aligned_cols=218  Identities=12%  Similarity=-0.006  Sum_probs=153.5

Q ss_pred             CCeEEEeCCcch--hHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGTGF--IGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +|++|||||+|+  ||.+++++|+++|++|++++| +......+..+...   ..++.++.+|++|.+++.++++     
T Consensus        31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (293)
T 3grk_A           31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQ-GDALKKRVEPLAEE---LGAFVAGHCDVADAASIDAVFETLEKK  106 (293)
T ss_dssp             TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEEC-SHHHHHHHHHHHHH---HTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHh---cCCceEEECCCCCHHHHHHHHHHHHHh
Confidence            578999999988  999999999999999999999 43222222222211   1467899999999998887765     


Q ss_pred             --CCCEEEEccCCCC----------CCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCccc
Q 020334           78 --GCAGVIHVAAPID----------IDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 --~~d~vih~a~~~~----------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        ++|++|||||...          .+.+++. ..+++|+.++..+++++.+.- ...+||++||...+..         
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~---------  176 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFT-NTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV---------  176 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB---------
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHH-HHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC---------
Confidence              6899999999753          1223343 789999999999999887642 1469999999876531         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .+....|+.+|...+.+.+.++.++   |++++.++||.+.++..... .. .......... ..+.
T Consensus       177 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~-~~~~~~~~~~-~~p~  240 (293)
T 3grk_A          177 -------------MPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGI-GD-FRYILKWNEY-NAPL  240 (293)
T ss_dssp             -------------CTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------CC-HHHHHHHHHH-HSTT
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcc-cc-hHHHHHHHHh-cCCC
Confidence                         1234579999999999999998774   89999999999998754321 11 1111111111 1111


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC--C-CceEEEecc
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD--A-KGRYICSSA  257 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~~  257 (327)
                           ..+..++|+|+++++++....  . +..+++.|.
T Consensus       241 -----~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  274 (293)
T 3grk_A          241 -----RRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSG  274 (293)
T ss_dssp             -----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCCCCHHHHHHHHHHHcCccccCCcceEEEECCC
Confidence                 257899999999999997532  2 346677554

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=1e-22  Score=172.84  Aligned_cols=221  Identities=17%  Similarity=0.140  Sum_probs=152.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| ++.....+..  ..    .++.++.+|++|++++.++++       
T Consensus         9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~--~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (270)
T 1yde_A            9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDK-DESGGRALEQ--EL----PGAVFILCDVTQEDDVKTLVSETIRRFG   81 (270)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--HC----TTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH--Hh----cCCeEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999 4322222111  11    257889999999998887765       


Q ss_pred             CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|++|||||....       +.+++ ...+++|+.++.++++++.+.   . .+++|++||...+. +           
T Consensus        82 ~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~-~-----------  147 (270)
T 1yde_A           82 RLDCVVNNAGHHPPPQRPEETSAQGF-RQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAI-G-----------  147 (270)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHH-C-----------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccC-C-----------
Confidence            68999999986432       11223 378999999999999887642   2 37999999976542 1           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCC---CCCchHHHHHHHHhCCcccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICP---KFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~  221 (327)
                                .+....|+.+|...+.+.+.++.+   .|+++++++||.+++|....   ...............  .++
T Consensus       148 ----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~p~  215 (270)
T 1yde_A          148 ----------QAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLA--QPL  215 (270)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHT--STT
T ss_pred             ----------CCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhc--CCC
Confidence                      122457999999999999998876   48999999999999974211   001111111111111  111


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCC-C-CCceEEEecc-ccCHHH
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYP-D-AKGRYICSSA-KLTIQE  263 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~-~-~~~~y~~~~~-~~s~~e  263 (327)
                           ..+..++|+|+++++++... . .+..+.+.|. .....+
T Consensus       216 -----~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~~  255 (270)
T 1yde_A          216 -----GRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGYGC  255 (270)
T ss_dssp             -----SSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC--
T ss_pred             -----CCCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecccCc
Confidence                 15789999999999998742 2 2336667543 444433

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.90  E-value=4.5e-23  Score=176.30  Aligned_cols=216  Identities=15%  Similarity=0.161  Sum_probs=152.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC---eEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY---FVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      +|++|||||+|+||.+++++|+++|+   +|++.+| +.+....+ ..+... ....++.++.+|++|++++.++++   
T Consensus        33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~  110 (287)
T 3rku_A           33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAAR-RLEKLEELKKTIDQE-FPNAKVHVAQLDITQAEKIKPFIENLP  110 (287)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEES-CHHHHHHHHHHHHHH-CTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEEC-CHHHHHHHHHHHHhh-CCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            57899999999999999999999987   9999999 43332222 222111 012468899999999999988875   


Q ss_pred             ----CCCEEEEccCCCC-C------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCc
Q 020334           78 ----GCAGVIHVAAPID-I------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDM  142 (327)
Q Consensus        78 ----~~d~vih~a~~~~-~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~  142 (327)
                          ++|++||+||... .      ..+++. +.+++|+.++..+++++.    +.+ ..+||++||...+..       
T Consensus       111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~-------  181 (287)
T 3rku_A          111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQ-DVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDA-------  181 (287)
T ss_dssp             GGGCSCCEEEECCCCCCCCCCTTSCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC-------
T ss_pred             HhcCCCCEEEECCCcCCCCCCcccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCC-------
Confidence                5799999999643 1      222344 889999999999998874    344 579999999775521       


Q ss_pred             ccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcc
Q 020334          143 LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNRE  219 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (327)
                                     .+....|+.+|...+.+.+.++.++   |++++.++||.|.++...................   
T Consensus       182 ---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---  243 (287)
T 3rku_A          182 ---------------YPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD---  243 (287)
T ss_dssp             ---------------CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT---
T ss_pred             ---------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc---
Confidence                           1335679999999999999999874   8999999999998874211000101111111111   


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCCC---CceEEEec
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPDA---KGRYICSS  256 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~  256 (327)
                             ...+.++|+|+++++++..+..   +.++++.+
T Consensus       244 -------~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~  276 (287)
T 3rku_A          244 -------TTPLMADDVADLIVYATSRKQNTVIADTLIFPT  276 (287)
T ss_dssp             -------SCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred             -------cCCCCHHHHHHHHHHHhCCCCCeEecceEEeeC
Confidence                   1345899999999999987653   33555543

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.90  E-value=8.2e-23  Score=171.59  Aligned_cols=196  Identities=13%  Similarity=0.074  Sum_probs=145.8

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .|+|+||||||+|+||++++++|+++|++|++++| +....              .-..+.+|++|.+++.++++     
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r-~~~~~--------------~~~~~~~d~~d~~~v~~~~~~~~~~   84 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDF-RENPN--------------ADHSFTIKDSGEEEIKSVIEKINSK   84 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SCCTT--------------SSEEEECSCSSHHHHHHHHHHHHTT
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-Ccccc--------------cccceEEEeCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999 43221              12456789999998887764     


Q ss_pred             --CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 --GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 --~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                        ++|+||||||....       ..+++ ...+++|+.++.++++++.+.- ...+||++||...+..            
T Consensus        85 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------  151 (251)
T 3orf_A           85 SIKVDTFVCAAGGWSGGNASSDEFLKSV-KGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR------------  151 (251)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHH-HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC------------
T ss_pred             cCCCCEEEECCccCCCCCcccccCHHHH-HHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC------------
Confidence              46999999996431       11233 3778999999999999988652 1358999999876521            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH-----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE-----HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                .++...|+.+|...+.+++.++.+     .++++++++||.+.++..            ...... ... 
T Consensus       152 ----------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~------------~~~~~~-~~~-  207 (251)
T 3orf_A          152 ----------TSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN------------RKYMSD-ANF-  207 (251)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH------------HHHCTT-SCG-
T ss_pred             ----------CCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch------------hhhccc-ccc-
Confidence                      133567999999999999999877     479999999999877631            111111 111 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcC---CCC-CceEEE
Q 020334          223 ILLNISMVHIDDVARAHIFLLEY---PDA-KGRYIC  254 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~---~~~-~~~y~~  254 (327)
                          ..+++++|+|+++++++..   ... +..+++
T Consensus       208 ----~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v  239 (251)
T 3orf_A          208 ----DDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKF  239 (251)
T ss_dssp             ----GGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred             ----cccCCHHHHHHHHHHHhcCccccCCcceEEEE
Confidence                2688999999999999987   223 335555

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.90  E-value=7.4e-23  Score=170.34  Aligned_cols=185  Identities=17%  Similarity=0.148  Sum_probs=139.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|++|||||+|+||++++++|+++|++|++++| ++....            ....++.+|++|++++.++++       
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   69 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDL-SANDQA------------DSNILVDGNKNWTEQEQSILEQTASSLQ   69 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEES-SCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec-Cccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            678999999999999999999999999999999 432211            235678899999988877664       


Q ss_pred             --CCCEEEEccCCCCCC-------CCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 --GCAGVIHVAAPIDID-------GKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 --~~d~vih~a~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                        ++|+|||+||.....       .+.+ ...+++|+.++.++++++.+.- ...+||++||...+..            
T Consensus        70 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------  136 (236)
T 1ooe_A           70 GSQVDGVFCVAGGWAGGSASSKDFVKNA-DLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP------------  136 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHH-HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC------------
T ss_pred             CCCCCEEEECCcccCCCCCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC------------
Confidence              689999999964311       1223 3778999999999999887642 1359999999876521            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc-----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH-----GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                .++...|+.+|...+.+++.++.++     |+++++++|+.+.++...            ...... .. 
T Consensus       137 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~------------~~~~~~-~~-  192 (236)
T 1ooe_A          137 ----------TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR------------KWMPNA-DH-  192 (236)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH------------HHSTTC-CG-
T ss_pred             ----------CCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchh------------hcCCCc-cc-
Confidence                      1335679999999999999998765     499999999999886311            000111 11 


Q ss_pred             cccCCCeeeHHHHHHHHHHhh
Q 020334          223 ILLNISMVHIDDVARAHIFLL  243 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~  243 (327)
                          ..++.++|+|++++.++
T Consensus       193 ----~~~~~~~dvA~~i~~~l  209 (236)
T 1ooe_A          193 ----SSWTPLSFISEHLLKWT  209 (236)
T ss_dssp             ----GGCBCHHHHHHHHHHHH
T ss_pred             ----cccCCHHHHHHHHHHHH
Confidence                14678899999998666

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.90  E-value=2.4e-23  Score=177.92  Aligned_cols=216  Identities=19%  Similarity=0.141  Sum_probs=152.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------C
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------G   78 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~   78 (327)
                      ++++|||||+|+||.+++++|+++|++|++++| +......+....     ..++.++.+|++|.+++.++++      +
T Consensus        30 ~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r-~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  103 (281)
T 3ppi_A           30 GASAIVSGGAGGLGEATVRRLHADGLGVVIADL-AAEKGKALADEL-----GNRAEFVSTNVTSEDSVLAAIEAANQLGR  103 (281)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHTTSSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            468999999999999999999999999999999 433322221111     2478999999999999887765      5


Q ss_pred             CCEEEEccC-CCCCC--------CC--chHHHHHHHHHhHHHHHHHHHHhc---------CCccEEEEeccceeeeecCC
Q 020334           79 CAGVIHVAA-PIDID--------GK--ETEEVMTQRAVNGTIGILKSCLKS---------GTVKRFVYTSSGSTVYFSGK  138 (327)
Q Consensus        79 ~d~vih~a~-~~~~~--------~~--~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~~~v~~SS~~v~~~~~~  138 (327)
                      +|++||+++ .....        ..  +...+.+++|+.++.++++++...         +...+||++||...+..   
T Consensus       104 id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---  180 (281)
T 3ppi_A          104 LRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG---  180 (281)
T ss_dssp             EEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC---
T ss_pred             CCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC---
Confidence            799999954 32211        11  112488999999999998877632         12469999999876521   


Q ss_pred             CCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHh
Q 020334          139 DVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVL  215 (327)
Q Consensus       139 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~  215 (327)
                                         .++...|+.+|...+.+.+.++.++   |++++.++||.+.++..........   .....
T Consensus       181 -------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~---~~~~~  238 (281)
T 3ppi_A          181 -------------------QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEAL---AKFAA  238 (281)
T ss_dssp             -------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHH---HHHHH
T ss_pred             -------------------CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHH---HHHHh
Confidence                               1235679999999999999888775   8999999999998764322111111   11111


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEYPDAKG-RYICSSA  257 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~  257 (327)
                      ..+  .    ...+.+++|+|+++++++......| +++++|.
T Consensus       239 ~~~--~----~~~~~~pedvA~~v~~l~s~~~~tG~~i~vdGG  275 (281)
T 3ppi_A          239 NIP--F----PKRLGTPDEFADAAAFLLTNGYINGEVMRLDGA  275 (281)
T ss_dssp             TCC--S----SSSCBCHHHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred             cCC--C----CCCCCCHHHHHHHHHHHHcCCCcCCcEEEECCC
Confidence            111  1    0268899999999999998766555 5567543

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.90  E-value=7.6e-23  Score=169.57  Aligned_cols=196  Identities=15%  Similarity=0.106  Sum_probs=141.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCC----C
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGC----A   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----d   80 (327)
                      ||++|||||+|+||.+++++|+++|++|++++| +.....   .+....  ..++.++.+|++|.+++.++++.+    |
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~~~---~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~d   74 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGR-SESKLS---TVTNCL--SNNVGYRARDLASHQEVEQLFEQLDSIPS   74 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEES-CHHHHH---HHHHTC--SSCCCEEECCTTCHHHHHHHHHSCSSCCS
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHH---HHHHHH--hhccCeEeecCCCHHHHHHHHHHHhhcCC
Confidence            468999999999999999999999999999999 432222   221111  257889999999999999988743    9


Q ss_pred             EEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCCCcccCCCCCChh
Q 020334           81 GVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDED  152 (327)
Q Consensus        81 ~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~  152 (327)
                      +|||+||....      +.+++ ...+++|+.++.++++++.+.-  +..++|++||...+..                 
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~-----------------  136 (230)
T 3guy_A           75 TVVHSAGSGYFGLLQEQDPEQI-QTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP-----------------  136 (230)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC-----------------
T ss_pred             EEEEeCCcCCCCccccCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC-----------------
Confidence            99999986542      12233 3789999999999998876542  1239999999876521                 


Q ss_pred             HhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCe
Q 020334          153 YIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISM  229 (327)
Q Consensus       153 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (327)
                           .++...|+.+|...+.+.+.++.++   |++++.++||.+..+......             ....     ...+
T Consensus       137 -----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------------~~~~-----~~~~  193 (230)
T 3guy_A          137 -----KAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG-------------KSLD-----TSSF  193 (230)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC----------------------------------C
T ss_pred             -----CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC-------------CCCC-----cccC
Confidence                 1335679999999999999998875   799999999999877422110             0011     1268


Q ss_pred             eeHHHHHHHHHHhhcCCC
Q 020334          230 VHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       230 i~v~D~a~~~~~~~~~~~  247 (327)
                      ..++|+|+++++++..+.
T Consensus       194 ~~~~dvA~~i~~l~~~~~  211 (230)
T 3guy_A          194 MSAEDAALMIHGALANIG  211 (230)
T ss_dssp             CCHHHHHHHHHHHCCEET
T ss_pred             CCHHHHHHHHHHHHhCcC
Confidence            899999999999998654

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.90  E-value=2.5e-22  Score=171.76  Aligned_cols=206  Identities=22%  Similarity=0.256  Sum_probs=147.9

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-------hhhhhhCCCCCCCCeEEEeCCCCChhHHH
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-------DLSFLTNLPGASERLQIFNADLNDPESFD   73 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~~~~D~~d~~~~~   73 (327)
                      |...++++|||||+|+||.+++++|+++|++|++++|+......       ....+...   ..++.++.+|++|++++.
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~   81 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA---GGQALPIVGDIRDGDAVA   81 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH---TSEEEEEECCTTSHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc---CCcEEEEECCCCCHHHHH
Confidence            44456899999999999999999999999999999994332111       11111111   247899999999999888


Q ss_pred             HHhc-------CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcC---CccEEEEeccceeeeecC
Q 020334           74 AAIA-------GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSG---TVKRFVYTSSGSTVYFSG  137 (327)
Q Consensus        74 ~~~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~v~~~~~  137 (327)
                      ++++       ++|++|||||....      +.+++ ...+++|+.++..+++++.+.-   ...++|++||...+... 
T Consensus        82 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-  159 (285)
T 3sc4_A           82 AAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRF-DLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK-  159 (285)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHH-HHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG-
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC-
Confidence            7765       78999999997542      12233 3778899999999999887651   25799999997654210 


Q ss_pred             CCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHH
Q 020334          138 KDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV  214 (327)
Q Consensus       138 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~  214 (327)
                                          ..+...|+.||...+.+.+.++.+   .|++++.++||.+...       ..    ....
T Consensus       160 --------------------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t-------~~----~~~~  208 (285)
T 3sc4_A          160 --------------------WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT-------AA----VQNL  208 (285)
T ss_dssp             --------------------GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC-------HH----HHHH
T ss_pred             --------------------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc-------HH----HHhh
Confidence                                022467999999999999999887   4899999999843321       11    1111


Q ss_pred             hCCccccccccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          215 LGNREEYSILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       215 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                      .......     ..+..++|+|+++++++....
T Consensus       209 ~~~~~~~-----~r~~~pedvA~~~~~l~s~~~  236 (285)
T 3sc4_A          209 LGGDEAM-----ARSRKPEVYADAAYVVLNKPS  236 (285)
T ss_dssp             HTSCCCC-----TTCBCTHHHHHHHHHHHTSCT
T ss_pred             ccccccc-----cCCCCHHHHHHHHHHHhCCcc
Confidence            1222112     257789999999999998764

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.90  E-value=9.6e-23  Score=170.77  Aligned_cols=201  Identities=20%  Similarity=0.265  Sum_probs=141.4

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------C
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------G   78 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   78 (327)
                      |++|||||+|+||.+++++|+++|++|++++| +++....+....     ..++.++.+|++|++++.++++       +
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   74 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGR-RQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWCN   74 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHTSCTTTCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999999999 432222221111     1368899999999999988875       5


Q ss_pred             CCEEEEccCCCC-------CCCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           79 CAGVIHVAAPID-------IDGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        79 ~d~vih~a~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      +|++||+||...       .+.+++. ..+++|+.++..+++++.    +.+ ..+||++||...+..            
T Consensus        75 iD~lvnnAg~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~------------  140 (248)
T 3asu_A           75 IDILVNNAGLALGMEPAHKASVEDWE-TMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWP------------  140 (248)
T ss_dssp             CCEEEECCCCCCCCSCGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC------------
T ss_pred             CCEEEECCCcCCCCCchhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhccC------------
Confidence            899999999642       1122333 789999999988888775    334 579999999765421            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceec-CCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVG-PFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                .++...|+.+|...+.+.+.++.++   |+++++++||.+.| +......... .....     . .+  
T Consensus       141 ----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~-~~~~~-----~-~~--  201 (248)
T 3asu_A          141 ----------YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGD-DGKAE-----K-TY--  201 (248)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------------
T ss_pred             ----------CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCc-hHHHH-----H-HH--
Confidence                      1234679999999999999988764   89999999999994 5321100000 00000     0 00  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCC
Q 020334          224 LLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                       ....++.++|+|+++++++..+
T Consensus       202 -~~~~~~~p~dvA~~v~~l~s~~  223 (248)
T 3asu_A          202 -QNTVALTPEDVSEAVWWVSTLP  223 (248)
T ss_dssp             ----CCBCHHHHHHHHHHHHHSC
T ss_pred             -hccCCCCHHHHHHHHHHHhcCC
Confidence             0113569999999999999864

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.90  E-value=3.3e-23  Score=173.48  Aligned_cols=209  Identities=19%  Similarity=0.174  Sum_probs=133.7

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHH---HHh-
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFD---AAI-   76 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~---~~~-   76 (327)
                      |...+|++|||||+|+||.+++++|++ |+.|++++| ++....   .+...    .++.++.+|+.+.+...   +.+ 
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r-~~~~~~---~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~   71 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGR-NPEHLA---ALAEI----EGVEPIESDIVKEVLEEGGVDKLK   71 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEES-CHHHHH---HHHTS----TTEEEEECCHHHHHHTSSSCGGGT
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeC-CHHHHH---HHHhh----cCCcceecccchHHHHHHHHHHHH
Confidence            666678999999999999999999988 899999999 433322   22221    46899999998875421   222 


Q ss_pred             --cCCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCCCcccCC
Q 020334           77 --AGCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        77 --~~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                        .++|++||+||.....      .+++ ...+++|+.++..+++++...-  ...++|++||...+..           
T Consensus        72 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------  139 (245)
T 3e9n_A           72 NLDHVDTLVHAAAVARDTTIEAGSVAEW-HAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGP-----------  139 (245)
T ss_dssp             TCSCCSEEEECC----------CHHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC------------------
T ss_pred             hcCCCCEEEECCCcCCCCchhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccC-----------
Confidence              2689999999875421      1223 3778999999888777764321  0268999999877641           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .++...|+.+|...+.+++.++.+   .|+++++++||.+.++........    .     .....   
T Consensus       140 -----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~-----~~~~~---  196 (245)
T 3e9n_A          140 -----------HPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDS----Q-----GTNFR---  196 (245)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------C---
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhh----h-----hcccc---
Confidence                       133567999999999999999876   489999999999998753221100    0     00011   


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCCCCceEEEe
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPDAKGRYICS  255 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~  255 (327)
                        ...+++++|+|++++++++.+..+.+|++.
T Consensus       197 --~~~~~~p~dvA~~i~~l~~~~~~~~~~~i~  226 (245)
T 3e9n_A          197 --PEIYIEPKEIANAIRFVIDAGETTQITNVD  226 (245)
T ss_dssp             --CGGGSCHHHHHHHHHHHHTSCTTEEEEEEE
T ss_pred             --cccCCCHHHHHHHHHHHHcCCCccceeeeE
Confidence              125889999999999999988777777754

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.90  E-value=4e-22  Score=165.80  Aligned_cols=220  Identities=15%  Similarity=0.138  Sum_probs=155.5

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |.+.+|++|||||++.||.++++.|++.|++|++.+| +.+... ..+++...   ..++.++.+|++|+++++++++  
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~-~~~~~~~~~~~i~~~---g~~~~~~~~Dvt~~~~v~~~~~~~   78 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVEL-LEDRLNQIVQELRGM---GKEVLGVKADVSKKKDVEEFVRRT   78 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC-CHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHH
Confidence            3455789999999999999999999999999999999 433322 22333322   3578999999999998887764  


Q ss_pred             -----CCCEEEEccCCCC-------CCCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCC
Q 020334           78 -----GCAGVIHVAAPID-------IDGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVD  141 (327)
Q Consensus        78 -----~~d~vih~a~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~  141 (327)
                           ++|++||+||...       .+.++|. ..+++|+.++..+.+++.    +.+ ..++|++||......      
T Consensus        79 ~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~-~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~------  150 (254)
T 4fn4_A           79 FETYSRIDVLCNNAGIMDGVTPVAEVSDELWE-RVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRG------  150 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCTTCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCS------
T ss_pred             HHHcCCCCEEEECCcccCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCC------
Confidence                 6899999998543       1233455 889999999877766554    444 579999999765421      


Q ss_pred             cccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC-ch--HHHHHHHHh
Q 020334          142 MLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFA-GS--VRSTLAMVL  215 (327)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~-~~--~~~~~~~~~  215 (327)
                                      .+....|+.+|.....+.+.++.++   ||++..+-||.+-.|....... ..  ........ 
T Consensus       151 ----------------~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~-  213 (254)
T 4fn4_A          151 ----------------GFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLM-  213 (254)
T ss_dssp             ----------------SSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHH-
T ss_pred             ----------------CCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcC-
Confidence                            1234579999999999998888765   8999999999998875332211 11  11111111 


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEYPDA--KG-RYICSSA  257 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~~  257 (327)
                         .+..     .+..++|+|+++++++.....  .| .+.+.|.
T Consensus       214 ---~~~~-----R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG  250 (254)
T 4fn4_A          214 ---SLSS-----RLAEPEDIANVIVFLASDEASFVNGDAVVVDGG  250 (254)
T ss_dssp             ---TTCC-----CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCC-----CCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCC
Confidence               1111     477899999999999975432  33 4455443

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.90  E-value=8.6e-22  Score=163.09  Aligned_cols=210  Identities=15%  Similarity=0.125  Sum_probs=151.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      |+|+||||||++.||.++++.|++.|++|++.+| +.+.   ...+...   ..++.++.+|++|+++++++++      
T Consensus         1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~-~~~~---~~~~~~~---~~~~~~~~~Dv~~~~~v~~~v~~~~~~~   73 (247)
T 3ged_A            1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDI-DEKR---SADFAKE---RPNLFYFHGDVADPLTLKKFVEYAMEKL   73 (247)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHTT---CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHh---cCCEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999 4322   2222221   3578899999999998887664      


Q ss_pred             -CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 -GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 -~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                       ++|++||+||...      .+.+++. ..+++|+.++..+.+++.+.  .+..++|++||...+..             
T Consensus        74 g~iDiLVNNAG~~~~~~~~~~~~e~~~-~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~-------------  139 (247)
T 3ged_A           74 QRIDVLVNNACRGSKGILSSLLYEEFD-YILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQS-------------  139 (247)
T ss_dssp             SCCCEEEECCCCCCCCGGGTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSC-------------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccC-------------
Confidence             6899999998654      2234555 88999999998887766543  11369999999765421             


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                               .+....|+.||.....+.+.++.++  ++++..+.||.+-.+....    .......     ..++.    
T Consensus       140 ---------~~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~----~~~~~~~-----~~Pl~----  197 (247)
T 3ged_A          140 ---------EPDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQE----FTQEDCA-----AIPAG----  197 (247)
T ss_dssp             ---------CTTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC-------CCHHHHH-----TSTTS----
T ss_pred             ---------CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHH----HHHHHHh-----cCCCC----
Confidence                     1224579999999999999888776  7999999999987664322    1111111     11222    


Q ss_pred             CCeeeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 020334          227 ISMVHIDDVARAHIFLLEYPDAKG-RYICSSA  257 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~  257 (327)
                       .+..++|+|++++++++.....| .+.+.|.
T Consensus       198 -R~g~pediA~~v~fL~s~~~iTG~~i~VDGG  228 (247)
T 3ged_A          198 -KVGTPKDISNMVLFLCQQDFITGETIIVDGG  228 (247)
T ss_dssp             -SCBCHHHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred             -CCcCHHHHHHHHHHHHhCCCCCCCeEEECcC
Confidence             57789999999999998654445 4455443

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.90  E-value=1.9e-22  Score=171.09  Aligned_cols=204  Identities=20%  Similarity=0.267  Sum_probs=140.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIAG----   78 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----   78 (327)
                      |+|++|||||+|+||.+++++|+++|++|++++| ++.....+ ..+..    ..++.++.+|++|++++.++++.    
T Consensus        20 ~~k~vlVTGas~gIG~aia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~   94 (272)
T 2nwq_A           20 MSSTLFITGATSGFGEACARRFAEAGWSLVLTGR-REERLQALAGELSA----KTRVLPLTLDVRDRAAMSAAVDNLPEE   94 (272)
T ss_dssp             -CCEEEESSTTTSSHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHTT----TSCEEEEECCTTCHHHHHHHHHTCCGG
T ss_pred             cCcEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHhhc----CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999 43322222 11211    13688999999999999888764    


Q ss_pred             ---CCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCcc-EEEEeccceeeeecCCCCCcc
Q 020334           79 ---CAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVK-RFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        79 ---~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~-~~v~~SS~~v~~~~~~~~~~~  143 (327)
                         +|++||+||....       ..+++. ..+++|+.++..+++++.    +.+ .. +||++||...+..        
T Consensus        95 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~--------  164 (272)
T 2nwq_A           95 FATLRGLINNAGLALGTDPAQSCDLDDWD-TMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWP--------  164 (272)
T ss_dssp             GSSCCEEEECCCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSC--------
T ss_pred             hCCCCEEEECCCCCCCCCCcccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccC--------
Confidence               5999999986431       122333 789999999877766654    444 46 9999999875521        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    .+....|+.+|...+.+.+.++.++   |+++++++||.+.++.......... .....      .
T Consensus       165 --------------~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~-~~~~~------~  223 (272)
T 2nwq_A          165 --------------YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQ-ARYDK------T  223 (272)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-------------------------
T ss_pred             --------------CCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccch-HHHHH------h
Confidence                          1234579999999999999988664   7999999999998875321100000 00000      0


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      +   ....++.++|+|+++++++..+
T Consensus       224 ~---~~~~~~~pedvA~~v~~l~s~~  246 (272)
T 2nwq_A          224 Y---AGAHPIQPEDIAETIFWIMNQP  246 (272)
T ss_dssp             -----CCCCBCHHHHHHHHHHHHTSC
T ss_pred             h---ccCCCCCHHHHHHHHHHHhCCC
Confidence            0   0113578999999999999864

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.90  E-value=1.1e-22  Score=171.92  Aligned_cols=207  Identities=16%  Similarity=0.148  Sum_probs=145.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| ++...... ..+...   ..++.++.+|++|++++.++++      
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDM-NREALEKAEASVREK---GVEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHTT---TSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999 43222221 222221   2468899999999998877664      


Q ss_pred             -CCCEEEEccCCC-CC------CCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 -GCAGVIHVAAPI-DI------DGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 -~~d~vih~a~~~-~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                       ++|++||+||.. ..      ..+++. ..+++|+.++.++++++.+.    + .++||++||...+..          
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----------  150 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFAPVQDYPSDDFA-RVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKG----------  150 (262)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSC----------
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccC----------
Confidence             789999999865 21      222333 78999999999988877653    3 579999999876531          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC------------CCchHHH-
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPK------------FAGSVRS-  209 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~------------~~~~~~~-  209 (327)
                                  .+....|+.+|...+.+.+.++.++   |+++++++||.+..+.....            .... .. 
T Consensus       151 ------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~  217 (262)
T 1zem_A          151 ------------PPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTD-PKV  217 (262)
T ss_dssp             ------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSS-HHH
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccC-HHH
Confidence                        1224579999999999998887654   89999999998877631110            0000 00 


Q ss_pred             HHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          210 TLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      ....... ..+.     ..+..++|+|+++++++...
T Consensus       218 ~~~~~~~-~~p~-----~r~~~p~dvA~~v~~l~s~~  248 (262)
T 1zem_A          218 VAQQMIG-SVPM-----RRYGDINEIPGVVAFLLGDD  248 (262)
T ss_dssp             HHHHHHH-TSTT-----SSCBCGGGSHHHHHHHHSGG
T ss_pred             HHHHHHh-cCCC-----CCCcCHHHHHHHHHHHcCch
Confidence            1011100 0111     25788999999999998753

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.90  E-value=2.5e-22  Score=167.68  Aligned_cols=197  Identities=12%  Similarity=0.074  Sum_probs=145.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|++|||||+|+||++++++|+++|++|++++| ++....            ....++.+|++|++++.++++       
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~~   73 (241)
T 1dhr_A            7 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDV-VENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLLG   73 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEES-SCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeC-Chhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999 432211            235678899999988877664       


Q ss_pred             --CCCEEEEccCCCCCC-------CCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 --GCAGVIHVAAPIDID-------GKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 --~~d~vih~a~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                        ++|++||+||.....       .+.+ ...+++|+.++..+++++.+.- ...+||++||...+..            
T Consensus        74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------  140 (241)
T 1dhr_A           74 DQKVDAILCVAGGWAGGNAKSKSLFKNC-DLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG------------  140 (241)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHH-HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC------------
T ss_pred             CCCCCEEEEcccccCCCCCcccCCHHHH-HHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC------------
Confidence              689999999964311       1223 3778999999999999887641 1369999999876531            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc-----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH-----GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                .++...|+.+|...+.+.+.++.++     |+++++++||.+-.+...            ...... .. 
T Consensus       141 ----------~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~------------~~~~~~-~~-  196 (241)
T 1dhr_A          141 ----------TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR------------KSMPEA-DF-  196 (241)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH------------HHSTTS-CG-
T ss_pred             ----------CCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccc------------ccCcch-hh-
Confidence                      1335679999999999999988653     599999999988775210            000111 11 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCCC---CceEEEe
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPDA---KGRYICS  255 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~y~~~  255 (327)
                          ..++.++|+|+++++++.....   +..+.+.
T Consensus       197 ----~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~  228 (241)
T 1dhr_A          197 ----SSWTPLEFLVETFHDWITGNKRPNSGSLIQVV  228 (241)
T ss_dssp             ----GGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEE
T ss_pred             ----ccCCCHHHHHHHHHHHhcCCCcCccceEEEEe
Confidence                1467899999999999976432   3355553

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.90  E-value=2.8e-22  Score=166.71  Aligned_cols=200  Identities=21%  Similarity=0.168  Sum_probs=146.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||++++++|+++|++|++++| +.+.... ...+...  ...++.++.+|++|++++.++++      
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGAR-SVDRLEKIAHELMQE--QGVEVFYHHLDVSKAESVEEFSKKVLERF   78 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH--HCCCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhh--cCCeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence            678999999999999999999999999999999 4332222 1222101  02578999999999999988876      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                       ++|++||+||....      +.+++ ...+++|+.++.++++++.+.  ....++|++||...+. .            
T Consensus        79 g~id~li~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~-~------------  144 (235)
T 3l77_A           79 GDVDVVVANAGLGYFKRLEELSEEEF-HEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSAR-L------------  144 (235)
T ss_dssp             SSCSEEEECCCCCCCCCTTTSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS-C------------
T ss_pred             CCCCEEEECCccccccCcccCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcc-c------------
Confidence             68999999997542      22333 378999999999999887642  1135777777765432 1            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc-CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCC
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH-GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNI  227 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (327)
                               .+....|+.+|...+.+.+.+..+. +++++.++||.+..+.......            .. ..     .
T Consensus       145 ---------~~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~------------~~-~~-----~  197 (235)
T 3l77_A          145 ---------IPYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG------------KP-KE-----K  197 (235)
T ss_dssp             ---------CTTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC------------CC-GG-----G
T ss_pred             ---------CCCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC------------cc-cc-----c
Confidence                     1224579999999999999885443 8999999999998775332110            00 00     1


Q ss_pred             CeeeHHHHHHHHHHhhcCCCC
Q 020334          228 SMVHIDDVARAHIFLLEYPDA  248 (327)
Q Consensus       228 ~~i~v~D~a~~~~~~~~~~~~  248 (327)
                      .++.++|+|++++++++.+..
T Consensus       198 ~~~~p~dva~~v~~l~~~~~~  218 (235)
T 3l77_A          198 GYLKPDEIAEAVRCLLKLPKD  218 (235)
T ss_dssp             TCBCHHHHHHHHHHHHTSCTT
T ss_pred             CCCCHHHHHHHHHHHHcCCCC
Confidence            578999999999999988654

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.89  E-value=1.8e-22  Score=172.29  Aligned_cols=222  Identities=18%  Similarity=0.155  Sum_probs=153.6

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |...+|++|||||+|+||.+++++|+++|++|++++| +......+....     ..++.++.+|++|++++.++++   
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~   74 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDK-SAERLRELEVAH-----GGNAVGVVGDVRSLQDQKRAAERCL   74 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHT-----BTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC-CHHHHHHHHHHc-----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            6666889999999999999999999999999999999 433222221111     2578999999999988877664   


Q ss_pred             ----CCCEEEEccCCCCCCC-------C----chHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCC
Q 020334           78 ----GCAGVIHVAAPIDIDG-------K----ETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDV  140 (327)
Q Consensus        78 ----~~d~vih~a~~~~~~~-------~----~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~  140 (327)
                          ++|++|||||......       +    .+ ...+++|+.++..+++++.+.-  +..++|++||...+..     
T Consensus        75 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~-~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----  148 (281)
T 3zv4_A           75 AAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAF-DDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYP-----  148 (281)
T ss_dssp             HHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSS-----
T ss_pred             HhcCCCCEEEECCCcCccccccccCChhhhHHHH-HHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccC-----
Confidence                6899999999753211       1    13 3778999999999988876431  1259999999875521     


Q ss_pred             CcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHH------HHH
Q 020334          141 DMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKFAGSVRS------TLA  212 (327)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~------~~~  212 (327)
                                       .+....|+.||...+.+.+.++.++  ++++..+.||.+..+............      ...
T Consensus       149 -----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  211 (281)
T 3zv4_A          149 -----------------NGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLAD  211 (281)
T ss_dssp             -----------------SSSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHH
T ss_pred             -----------------CCCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHH
Confidence                             1234579999999999999998875  499999999999887533211100000      001


Q ss_pred             HHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC----CCceEEEecc
Q 020334          213 MVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD----AKGRYICSSA  257 (327)
Q Consensus       213 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~----~~~~y~~~~~  257 (327)
                      .... ..+.     ..+..++|+|+++++++..+.    .+..+++.|.
T Consensus       212 ~~~~-~~p~-----~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG  254 (281)
T 3zv4_A          212 MLKS-VLPI-----GRMPALEEYTGAYVFFATRGDSLPATGALLNYDGG  254 (281)
T ss_dssp             HHHH-TCTT-----SSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSS
T ss_pred             HHHh-cCCC-----CCCCCHHHHHHHHHHhhcccccccccCcEEEECCC
Confidence            1111 1111     268899999999999998332    2335667554

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.89  E-value=1.8e-22  Score=172.99  Aligned_cols=216  Identities=17%  Similarity=0.117  Sum_probs=151.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhh-CCCCCCCCeEEEeCCCCC----hhHHHHHhc-
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLT-NLPGASERLQIFNADLND----PESFDAAIA-   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~~~~~~~D~~d----~~~~~~~~~-   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++|+.......+ ..+. ..   ..++.++.+|++|    ++++.++++ 
T Consensus        23 ~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~~Dv~~~~~~~~~v~~~~~~   99 (288)
T 2x9g_A           23 APAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER---SNTAVVCQADLTNSNVLPASCEEIINS   99 (288)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS---TTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc---CCceEEEEeecCCccCCHHHHHHHHHH
Confidence            578999999999999999999999999999999331222221 2221 11   2468899999999    888777664 


Q ss_pred             ------CCCEEEEccCCCCCCC-------C--------chHHHHHHHHHhHHHHHHHHHHhcC---C------ccEEEEe
Q 020334           78 ------GCAGVIHVAAPIDIDG-------K--------ETEEVMTQRAVNGTIGILKSCLKSG---T------VKRFVYT  127 (327)
Q Consensus        78 ------~~d~vih~a~~~~~~~-------~--------~~~~~~~~~nv~~~~~l~~~~~~~~---~------~~~~v~~  127 (327)
                            ++|++||+||......       .        +.....+++|+.++..+++++.+.-   .      ..+||++
T Consensus       100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~i  179 (288)
T 2x9g_A          100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL  179 (288)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence                  6899999998643211       1        1123678999999999988876542   1      3589999


Q ss_pred             ccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC
Q 020334          128 SSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFA  204 (327)
Q Consensus       128 SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~  204 (327)
                      ||...+..                      .++...|+.+|...+.+.+.++.++   |+++++++||.+++|. . ..+
T Consensus       180 sS~~~~~~----------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~~  235 (288)
T 2x9g_A          180 CDAMVDQP----------------------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MGE  235 (288)
T ss_dssp             CCTTTTSC----------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SCH
T ss_pred             ecccccCC----------------------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cCh
Confidence            99876521                      1335679999999999999888764   8999999999999986 2 111


Q ss_pred             chHHHHHHHHhCCccccccccCCCe-eeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          205 GSVRSTLAMVLGNREEYSILLNISM-VHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      .    ........ .+.     ..+ ..++|+|+++++++....  ..| .+++.|.
T Consensus       236 ~----~~~~~~~~-~p~-----~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  282 (288)
T 2x9g_A          236 E----EKDKWRRK-VPL-----GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGG  282 (288)
T ss_dssp             H----HHHHHHHT-CTT-----TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             H----HHHHHHhh-CCC-----CCCCCCHHHHHHHHHHHhCccccCccCCEEEECcc
Confidence            1    11111111 111     135 799999999999997532  234 4556543

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.89  E-value=2.3e-22  Score=175.14  Aligned_cols=216  Identities=14%  Similarity=0.038  Sum_probs=152.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEE-cCCCCCcchh-hhhh-CCCCCCCCeEEEeCCCCChh-----------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTV-RSDPEHKKDL-SFLT-NLPGASERLQIFNADLNDPE-----------   70 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~-~~~~-~~~~~~~~~~~~~~D~~d~~-----------   70 (327)
                      +|++|||||+|+||.++++.|+++|++|++++ | +......+ ..+. ..   ..++.++.+|++|++           
T Consensus        46 ~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r-~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~  121 (328)
T 2qhx_A           46 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR-SAAEANALSATLNARR---PNSAITVQADLSNVATAPVSGADGSA  121 (328)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHHHHHS---TTCEEEEECCCSSSCBCC-------C
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHHHhhc---CCeEEEEEeeCCCchhcccccccccc
Confidence            47899999999999999999999999999999 7 43322221 2221 11   246889999999988           


Q ss_pred             ------HHHHHhc-------CCCEEEEccCCCCCCC-------------------CchHHHHHHHHHhHHHHHHHHHHhc
Q 020334           71 ------SFDAAIA-------GCAGVIHVAAPIDIDG-------------------KETEEVMTQRAVNGTIGILKSCLKS  118 (327)
Q Consensus        71 ------~~~~~~~-------~~d~vih~a~~~~~~~-------------------~~~~~~~~~~nv~~~~~l~~~~~~~  118 (327)
                            ++.++++       ++|++|||||......                   .+.....+++|+.++..+++++.+.
T Consensus       122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  8877665       7899999998653211                   1122367899999999998877642


Q ss_pred             ---CC------ccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcE
Q 020334          119 ---GT------VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDL  186 (327)
Q Consensus       119 ---~~------~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~  186 (327)
                         ..      ..+||++||...+..                      .++...|+.+|...+.+.+.++.++   |+++
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~~----------------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrv  259 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQP----------------------LLGYTIYTMAKGALEGLTRSAALELAPLQIRV  259 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTSC----------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             HHhcCCcCCCCCcEEEEECchhhccC----------------------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence               11      369999999875521                      1235679999999999999988775   8999


Q ss_pred             EEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--C-CceEEEecc
Q 020334          187 VTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--A-KGRYICSSA  257 (327)
Q Consensus       187 ~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~~  257 (327)
                      ++++||.+.++. .. .    .......... .++.    ..+..++|+|+++++++....  . +..+++.|.
T Consensus       260 n~v~PG~v~T~~-~~-~----~~~~~~~~~~-~p~~----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  322 (328)
T 2qhx_A          260 NGVGPGLSVLVD-DM-P----PAVWEGHRSK-VPLY----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG  322 (328)
T ss_dssp             EEEEESSBSCCC-CS-C----HHHHHHHHTT-CTTT----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEecCcccCCc-cc-c----HHHHHHHHhh-CCCC----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            999999999886 21 1    1111211111 1110    147789999999999996532  2 335566554

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.89  E-value=2.3e-22  Score=168.97  Aligned_cols=212  Identities=21%  Similarity=0.168  Sum_probs=148.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCC--CChhHHHHHhc----
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADL--NDPESFDAAIA----   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~--~d~~~~~~~~~----   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| +....... ..+....  ..++.++.+|+  +|.+++.++++    
T Consensus        12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A           12 DRIILVTGASDGIGREAAMTYARYGATVILLGR-NEEKLRQVASHINEET--GRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHHH--SCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhc--CCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999 43322221 2221110  13678999999  88888777664    


Q ss_pred             ---CCCEEEEccCCCC----C---CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 ---GCAGVIHVAAPID----I---DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ---~~d~vih~a~~~~----~---~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                         ++|++||+||...    .   +.+++ ...+++|+.++..+++++.    +.+ ..+||++||...+..        
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~--------  158 (252)
T 3f1l_A           89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVW-QDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQG--------  158 (252)
T ss_dssp             HCSCCSEEEECCCCCCCCSCTTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSC--------
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHH-HHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccC--------
Confidence               6899999999642    1   12223 3789999999999988874    334 579999999775421        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcC--CcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG--LDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                    .++...|+.+|...+.+.+.++.+++  +++..+.||.+..+..            ........ .
T Consensus       159 --------------~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~------------~~~~~~~~-~  211 (252)
T 3f1l_A          159 --------------RANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMR------------ASAFPTED-P  211 (252)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHH------------HHHCTTCC-G
T ss_pred             --------------CCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchh------------hhhCCccc-h
Confidence                          13356799999999999999998863  8999999998876521            11111110 0


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEec-cccCH
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSS-AKLTI  261 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~-~~~s~  261 (327)
                           ..+..++|+|+++++++....   .+..+++.| ...++
T Consensus       212 -----~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~  250 (252)
T 3f1l_A          212 -----QKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGI  250 (252)
T ss_dssp             -----GGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC-----
T ss_pred             -----hccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCC
Confidence                 146789999999999987643   234666644 34443

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.89  E-value=7.9e-22  Score=166.08  Aligned_cols=220  Identities=16%  Similarity=0.132  Sum_probs=155.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|+++.+++...... ...+...   ..++.++.+|++|.+++.++++      
T Consensus         7 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            7 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN---GGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT---TCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc---CCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999876534433222 2222221   3568889999999988777654      


Q ss_pred             -------CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCccc
Q 020334           78 -------GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                             ++|++||+||.....     ..+.....+++|+.++..+++++.+.- +..++|++||...+..         
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~---------  154 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS---------  154 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC---------
T ss_pred             cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC---------
Confidence                   289999999975421     112223778999999999999988651 1468999999876531         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .+....|+.+|...+.+.+.++.++   +++++.++||.+.++..........  ....... ..++
T Consensus       155 -------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--~~~~~~~-~~~~  218 (255)
T 3icc_A          155 -------------LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPM--MKQYATT-ISAF  218 (255)
T ss_dssp             -------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHH--HHHHHHH-TSTT
T ss_pred             -------------CCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHH--HHHhhhc-cCCc
Confidence                         1234679999999999999988774   8999999999999886543222211  1111111 1111


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                           ..+..++|+|+++++++....   .+.+++++|.
T Consensus       219 -----~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG  252 (255)
T 3icc_A          219 -----NRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG  252 (255)
T ss_dssp             -----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             -----CCCCCHHHHHHHHHHHhCcccCCccCCEEEecCC
Confidence                 268899999999999986532   2446667554

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.89  E-value=2.1e-22  Score=171.70  Aligned_cols=212  Identities=15%  Similarity=0.109  Sum_probs=147.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| +...... ...+....  ...+.++.+|++|++++.++++      
T Consensus        33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  109 (281)
T 4dry_A           33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGR-RPDVLDAAAGEIGGRT--GNIVRAVVCDVGDPDQVAALFAAVRAEF  109 (281)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhcC--CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999 4322222 22221110  1235889999999998887764      


Q ss_pred             -CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHHhc----C-CccEEEEeccceeeeecCCCCCccc
Q 020334           78 -GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCLKS----G-TVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 -~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                       ++|++|||||....       +.+++. ..+++|+.++..+.+++.+.    + ...+||++||...+..         
T Consensus       110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~---------  179 (281)
T 4dry_A          110 ARLDLLVNNAGSNVPPVPLEEVTFEQWN-GIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP---------  179 (281)
T ss_dssp             SCCSEEEECCCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC---------
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC---------
Confidence             67999999986432       223333 78999999988877766543    1 1369999999765421         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .++...|+.+|...+.+.+.++.+   .|+++..++||.+..+........           .....
T Consensus       180 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----------~~~~~  235 (281)
T 4dry_A          180 -------------RPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTG-----------VLQAN  235 (281)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CE-----------EECTT
T ss_pred             -------------CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcch-----------hhhhh
Confidence                         133567999999999999998876   489999999999988743211000           00000


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCCCCceEE
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPDAKGRYI  253 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~  253 (327)
                      .......++.++|+|+++++++..+....+.+
T Consensus       236 ~~~~~~~~~~pedvA~~v~fL~s~~~~~~i~~  267 (281)
T 4dry_A          236 GEVAAEPTIPIEHIAEAVVYMASLPLSANVLT  267 (281)
T ss_dssp             SCEEECCCBCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred             hcccccCCCCHHHHHHHHHHHhCCCccCcccc
Confidence            00001257899999999999999877655443

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.89  E-value=2.3e-22  Score=169.12  Aligned_cols=217  Identities=11%  Similarity=0.053  Sum_probs=144.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHH----HhcCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDA----AIAGCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~----~~~~~d   80 (327)
                      ||++|||||+|+||.+++++|+++|++|++++| ++........+...   ..++..+  |..+.+.+.+    .+.++|
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~l~~~---~~~~~~~--d~~~v~~~~~~~~~~~g~iD   74 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDE-SFKQKDELEAFAET---YPQLKPM--SEQEPAELIEAVTSAYGQVD   74 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCG-GGGSHHHHHHHHHH---CTTSEEC--CCCSHHHHHHHHHHHHSCCC
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHhc---CCcEEEE--CHHHHHHHHHHHHHHhCCCC
Confidence            468999999999999999999999999999999 44333322222111   1234443  5554433322    223799


Q ss_pred             EEEEccCCC-CC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           81 GVIHVAAPI-DI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        81 ~vih~a~~~-~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                      ++||+||.. ..      +.+++ ...+++|+.++..+++++.    +.+ ..+||++||...+..              
T Consensus        75 ~lv~nAg~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--------------  138 (254)
T 1zmt_A           75 VLVSNDIFAPEFQPIDKYAVEDY-RGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGP--------------  138 (254)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSC--------------
T ss_pred             EEEECCCcCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccC--------------
Confidence            999999975 31      11233 3789999999999888775    333 579999999776521              


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchH----HHHHHHHhCCccccc
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSV----RSTLAMVLGNREEYS  222 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~----~~~~~~~~~~~~~~~  222 (327)
                              .++...|+.+|...+.+.+.++.++   |+++++++||.++||.........+    ......... ..+. 
T Consensus       139 --------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~-~~p~-  208 (254)
T 1zmt_A          139 --------WKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKK-VTAL-  208 (254)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHH-HSSS-
T ss_pred             --------CCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhc-cCCC-
Confidence                    1234579999999999999988764   8999999999999886543221111    001111100 0111 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                          ..+..++|+|+++++++....   .+..+++.+.
T Consensus       209 ----~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG  242 (254)
T 1zmt_A          209 ----QRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG  242 (254)
T ss_dssp             ----SSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred             ----CCCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence                257899999999999997643   2345666554

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.89  E-value=4.8e-21  Score=157.49  Aligned_cols=213  Identities=15%  Similarity=0.123  Sum_probs=151.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---CCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---GCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~   81 (327)
                      +|++|||||++.||.++++.|++.|++|++.+| +.+.....        ...++..+.+|++|+++++++++   ++|+
T Consensus        11 GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~-~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi   81 (242)
T 4b79_A           11 GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGL-DADGVHAP--------RHPRIRREELDITDSQRLQRLFEALPRLDV   81 (242)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-STTSTTSC--------CCTTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHhhh--------hcCCeEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            689999999999999999999999999999999 43322211        13578999999999999988775   6899


Q ss_pred             EEEccCCCC----CCCCchHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCCCcccCCCCCChhHhh
Q 020334           82 VIHVAAPID----IDGKETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIR  155 (327)
Q Consensus        82 vih~a~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~  155 (327)
                      +|||||...    .+.++|. ..+++|+.++..+.+++.+.-  +..++|++||..... +                   
T Consensus        82 LVNNAGi~~~~~~~~~~~w~-~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~-~-------------------  140 (242)
T 4b79_A           82 LVNNAGISRDREEYDLATFE-RVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTF-G-------------------  140 (242)
T ss_dssp             EEECCCCCCGGGGGSHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTS-C-------------------
T ss_pred             EEECCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccC-C-------------------
Confidence            999999754    2234455 889999999888777655321  136999999976542 1                   


Q ss_pred             hcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeH
Q 020334          156 KLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHI  232 (327)
Q Consensus       156 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  232 (327)
                        .+....|+.||.....+.+.++.++   ||++..+.||.+..|........ . .....+.. ..++.     .+..+
T Consensus       141 --~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~-~-~~~~~~~~-~~Plg-----R~g~p  210 (242)
T 4b79_A          141 --SADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKAD-V-EATRRIMQ-RTPLA-----RWGEA  210 (242)
T ss_dssp             --CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCC-H-HHHHHHHH-TCTTC-----SCBCH
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCC-H-HHHHHHHh-cCCCC-----CCcCH
Confidence              1234579999999999999888765   89999999999988753322111 1 11111111 12222     57889


Q ss_pred             HHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          233 DDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       233 ~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      +|+|+++++++....  ..| .+.+.|.
T Consensus       211 eeiA~~v~fLaSd~a~~iTG~~l~VDGG  238 (242)
T 4b79_A          211 PEVASAAAFLCGPGASFVTGAVLAVDGG  238 (242)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHhCchhcCccCceEEECcc
Confidence            999999999997643  233 4556543

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.89  E-value=9.2e-22  Score=166.82  Aligned_cols=220  Identities=15%  Similarity=0.080  Sum_probs=156.0

Q ss_pred             CCCeEEEeCCc--chhHHHHHHHHHHCCCeEEEEEcCCCCC-cchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            4 QKGKVCVTGGT--GFIGSWLIMRLLDHGYFVTTTVRSDPEH-KKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         4 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      .++++|||||+  |+||.+++++|+++|++|++++|+.... ......+....  ..++.++.+|++|++++.++++   
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY--GIKAKAYKCQVDSYESCEKLVKDVV   96 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH--CCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc--CCceeEEecCCCCHHHHHHHHHHHH
Confidence            46899999999  9999999999999999999999944332 22333332111  2478999999999998887765   


Q ss_pred             ----CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 ----GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ----~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                          ++|++||+||....      +.+++ ...+++|+.++.++++++    ++.+ ..++|++||...+....      
T Consensus        97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------  168 (267)
T 3gdg_A           97 ADFGQIDAFIANAGATADSGILDGSVEAW-NHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANF------  168 (267)
T ss_dssp             HHTSCCSEEEECCCCCCCSCTTTSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCS------
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHH-HHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccCC------
Confidence                57999999986542      12233 378999999999998887    3444 57999999976542110      


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcC--CcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG--LDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                    ..+...|+.+|...+.+++.++.+++  ++++.+.||.+..+..... ...   ...... ...+.
T Consensus       169 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~-~~~---~~~~~~-~~~~~  229 (267)
T 3gdg_A          169 --------------PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFV-PKE---TQQLWH-SMIPM  229 (267)
T ss_dssp             --------------SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGS-CHH---HHHHHH-TTSTT
T ss_pred             --------------CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhC-CHH---HHHHHH-hcCCC
Confidence                          12356799999999999999998763  7999999999988753221 111   111111 11122


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC--C-CceEEEecc
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD--A-KGRYICSSA  257 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~~  257 (327)
                           ..+.+++|+|+++++++....  . +..++++|+
T Consensus       230 -----~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG  263 (267)
T 3gdg_A          230 -----GRDGLAKELKGAYVYFASDASTYTTGADLLIDGG  263 (267)
T ss_dssp             -----SSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred             -----CCCcCHHHHHhHhheeecCccccccCCEEEECCc
Confidence                 268899999999999997643  2 335666543

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.88  E-value=6.9e-22  Score=169.22  Aligned_cols=200  Identities=14%  Similarity=0.060  Sum_probs=143.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +++||||||+|+||.+++++|+++|++|++++| ++.....+ ..+....  ..++.++.+|++|.+++.++++      
T Consensus        28 ~k~vlITGasggIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           28 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTAR-SKETLQKVVSHCLELG--AASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHHT--CSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHHhC--CCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999 43322221 1111110  1367899999999988877664      


Q ss_pred             -CCCEEEEc-cCCCCCC----CCchHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           78 -GCAGVIHV-AAPIDID----GKETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        78 -~~d~vih~-a~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                       ++|+|||+ |+.....    ..+.....+++|+.++.++++++.+.-  ..++||++||...+..              
T Consensus       105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~--------------  170 (286)
T 1xu9_A          105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA--------------  170 (286)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC--------------
T ss_pred             CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccC--------------
Confidence             68999999 5543321    112223779999999999988776431  1369999999875521              


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc-----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH-----GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                              .++...|+.+|...+.+++.++.++     ++++++++||.+.++...           . .....      
T Consensus       171 --------~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~-----------~-~~~~~------  224 (286)
T 1xu9_A          171 --------YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM-----------K-AVSGI------  224 (286)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH-----------H-HSCGG------
T ss_pred             --------CCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHH-----------H-hcccc------
Confidence                    1235679999999999998887664     899999999988765310           0 00000      


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCC
Q 020334          225 LNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                      ....+++++|+|+.++.+++.+.
T Consensus       225 ~~~~~~~~~~vA~~i~~~~~~~~  247 (286)
T 1xu9_A          225 VHMQAAPKEECALEIIKGGALRQ  247 (286)
T ss_dssp             GGGGCBCHHHHHHHHHHHHHTTC
T ss_pred             ccCCCCCHHHHHHHHHHHHhcCC
Confidence            01257899999999999998754

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.88  E-value=5.2e-21  Score=159.87  Aligned_cols=224  Identities=21%  Similarity=0.220  Sum_probs=154.2

Q ss_pred             CCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            2 EEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      .+.+|++|||||++.||.++++.|++.|++|++.+| +.+.......+...   ..++.++.+|++|+++++++++    
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r-~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~v~~~~~   79 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFAR-HAPDGAFLDALAQR---QPRATYLPVELQDDAQCRDAVAQTIA   79 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SCCCHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC-CcccHHHHHHHHhc---CCCEEEEEeecCCHHHHHHHHHHHHH
Confidence            445789999999999999999999999999999999 44333333333322   3578999999999988877664    


Q ss_pred             ---CCCEEEEccCCCC-----CCCCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 ---GCAGVIHVAAPID-----IDGKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ---~~d~vih~a~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                         ++|++||+||...     ...+++. ..+++|+.++..+.+++.+.  .+..++|++||..... +           
T Consensus        80 ~~G~iDiLVNnAGi~~~~~~~~~~e~~~-~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~-~-----------  146 (258)
T 4gkb_A           80 TFGRLDGLVNNAGVNDGIGLDAGRDAFV-ASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVT-G-----------  146 (258)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHH-C-----------
T ss_pred             HhCCCCEEEECCCCCCCCCccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhcc-C-----------
Confidence               6899999998643     1223444 78999999988877765532  0126899999987542 1           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCch--HHHHHHHHhCCccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGS--VRSTLAMVLGNREEYS  222 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~  222 (327)
                                .+....|+.+|.....+.+.++.++   ||++..+.||.+-.|.........  ........... .++ 
T Consensus       147 ----------~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~-~pl-  214 (258)
T 4gkb_A          147 ----------QGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAK-VPL-  214 (258)
T ss_dssp             ----------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTT-CTT-
T ss_pred             ----------CCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhc-CCC-
Confidence                      1234579999999999999888764   899999999999887543211100  00011111111 111 


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                         .+.+..++|+|+++++++....  ..| .+.+.|.
T Consensus       215 ---g~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG  249 (258)
T 4gkb_A          215 ---GRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGG  249 (258)
T ss_dssp             ---TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCCcCHHHHHHHHHHHhCchhcCccCCeEEECCC
Confidence               0247789999999999987543  234 4556544

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.88  E-value=4.6e-22  Score=167.95  Aligned_cols=209  Identities=16%  Similarity=0.128  Sum_probs=139.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| ++..... ...+...   ..++.++.+|++|++++.++++      
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            5 GQVCVVTGASRGIGRGIALQLCKAGATVYITGR-HLDTLRVVAQEAQSL---GGQCVPVVCDSSQESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH---SSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHc---CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            688999999999999999999999999999999 4322221 1222111   2467889999999988776543      


Q ss_pred             --CCCEEEEccC--CC--------C---CCCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCC
Q 020334           78 --GCAGVIHVAA--PI--------D---IDGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGK  138 (327)
Q Consensus        78 --~~d~vih~a~--~~--------~---~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~  138 (327)
                        ++|++||+||  ..        .   ...+.+. ..+++|+.++..+.+++.    +.+ ..+||++||...+.    
T Consensus        81 ~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~----  154 (260)
T 2qq5_A           81 QGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWD-DINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQ----  154 (260)
T ss_dssp             TTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHH-HHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTS----
T ss_pred             CCCceEEEECCccccccccccCCCccccCCHHHHH-HHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcC----
Confidence              5799999994  21        1   1223344 778889888876665543    444 57999999976542    


Q ss_pred             CCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHh
Q 020334          139 DVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVL  215 (327)
Q Consensus       139 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~  215 (327)
                                         ..+...|+.+|...+.+.+.++.+   .|+++++++||.+.++..................
T Consensus       155 -------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  215 (260)
T 2qq5_A          155 -------------------YMFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLK  215 (260)
T ss_dssp             -------------------CCSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------
T ss_pred             -------------------CCCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHH
Confidence                               122457999999999999998865   3899999999999887532211100000000000


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                      .....+.     .+..++|+|+++++++....
T Consensus       216 ~~~~~~~-----~~~~pe~va~~v~~l~s~~~  242 (260)
T 2qq5_A          216 QFKSAFS-----SAETTELSGKCVVALATDPN  242 (260)
T ss_dssp             ------C-----HHHHHHHHHHHHHHHHTCTT
T ss_pred             HHHhhhc-----cCCCHHHHHHHHHHHhcCcc
Confidence            0000011     24679999999999997653

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.88  E-value=4.3e-21  Score=164.58  Aligned_cols=216  Identities=14%  Similarity=0.066  Sum_probs=151.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEE-cCCCCCcchh-hhhh-CCCCCCCCeEEEeCCCCChh-----------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTV-RSDPEHKKDL-SFLT-NLPGASERLQIFNADLNDPE-----------   70 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~-~~~~-~~~~~~~~~~~~~~D~~d~~-----------   70 (327)
                      +|++|||||+|+||.+++++|+++|++|++++ | +....... ..+. ..   ..++.++.+|++|++           
T Consensus         9 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r-~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (291)
T 1e7w_A            9 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR-SAAEANALSATLNARR---PNSAITVQADLSNVATAPVSGADGSA   84 (291)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHHHHHS---TTCEEEEECCCSSSCBCCCC----CC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHHhhhc---CCeeEEEEeecCCccccccccccccc
Confidence            57899999999999999999999999999999 8 43222221 2221 11   247899999999998           


Q ss_pred             ------HHHHHhc-------CCCEEEEccCCCCCC-----C--------------CchHHHHHHHHHhHHHHHHHHHHhc
Q 020334           71 ------SFDAAIA-------GCAGVIHVAAPIDID-----G--------------KETEEVMTQRAVNGTIGILKSCLKS  118 (327)
Q Consensus        71 ------~~~~~~~-------~~d~vih~a~~~~~~-----~--------------~~~~~~~~~~nv~~~~~l~~~~~~~  118 (327)
                            ++.++++       ++|++|||||.....     .              .+.....+++|+.++..+++++.+.
T Consensus        85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  164 (291)
T 1e7w_A           85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  164 (291)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                  8877665       789999999865321     1              1222377899999999998887642


Q ss_pred             ---CC------ccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcE
Q 020334          119 ---GT------VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDL  186 (327)
Q Consensus       119 ---~~------~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~  186 (327)
                         ..      ..+||++||...+..                      .+....|+.+|...+.+.+.++.++   |+++
T Consensus       165 m~~~~~~~~~~~g~Iv~isS~~~~~~----------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~v  222 (291)
T 1e7w_A          165 VAGTPAKHRGTNYSIINMVDAMTNQP----------------------LLGYTIYTMAKGALEGLTRSAALELAPLQIRV  222 (291)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTTSC----------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             HHhcCCCCCCCCcEEEEEechhhcCC----------------------CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEE
Confidence               11      369999999875521                      1235679999999999999988764   8999


Q ss_pred             EEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          187 VTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       187 ~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      +.++||.+..+. .  ..   .......... .+..    ..+..++|+|+++++++....  ..| .+++.+.
T Consensus       223 n~v~PG~v~T~~-~--~~---~~~~~~~~~~-~p~~----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  285 (291)
T 1e7w_A          223 NGVGPGLSVLVD-D--MP---PAVWEGHRSK-VPLY----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG  285 (291)
T ss_dssp             EEEEESSBCCGG-G--SC---HHHHHHHHTT-CTTT----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEeeCCccCCc-c--CC---HHHHHHHHhh-CCCC----CCCCCHHHHHHHHHHHhCCcccCccCcEEEECCC
Confidence            999999998775 2  21   1111111111 1110    037789999999999997532  234 5556544

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.88  E-value=9.7e-22  Score=163.55  Aligned_cols=219  Identities=12%  Similarity=0.058  Sum_probs=153.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||++.||.++++.|+++|++|++.+| +.+.. .....+...   ..++.++.+|++|+++++++++     
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~-~~~~~~~~~~~l~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDI-RATLLAESVDTLTRK---GYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCS-CHHHHHHHHHHHHHT---TCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc---CCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999 43322 222333322   3578899999999998887764     


Q ss_pred             --CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||...      .+.++|. ..+++|+.++..+.+++.    +.+...++|++||......          
T Consensus        84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~-~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~----------  152 (255)
T 4g81_D           84 GIHVDILINNAGIQYRKPMVELELENWQ-KVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAA----------  152 (255)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSB----------
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCC----------
Confidence              5899999998654      2334555 889999999888777553    2222579999999765421          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .+....|+.+|.....+.+.++.++   ||++..+.||.+..|........  ........ ...++.
T Consensus       153 ------------~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~--~~~~~~~~-~~~Pl~  217 (255)
T 4g81_D          153 ------------RPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIED--KQFDSWVK-SSTPSQ  217 (255)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTC--HHHHHHHH-HHSTTC
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCC--HHHHHHHH-hCCCCC
Confidence                        1224579999999999999888764   89999999999987742211000  01111111 111222


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                           .+..++|+|+++++++....  ..| .+.+.|.
T Consensus       218 -----R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG  250 (255)
T 4g81_D          218 -----RWGRPEELIGTAIFLSSKASDYINGQIIYVDGG  250 (255)
T ss_dssp             -----SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCcCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence                 57788999999999986543  233 5556554

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.88  E-value=3.8e-21  Score=163.51  Aligned_cols=207  Identities=18%  Similarity=0.186  Sum_probs=145.0

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc---hhhhhhC-CCCCCCCeEEEeCCCCChhHHHHHh
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK---DLSFLTN-LPGASERLQIFNADLNDPESFDAAI   76 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~   76 (327)
                      |...+|++|||||+|+||.+++++|+++|++|++++|+......   .+..... ......++.++.+|++|++++.+++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            55567899999999999999999999999999999994332111   1111100 0000246889999999999888776


Q ss_pred             c-------CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCC
Q 020334           77 A-------GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKD  139 (327)
Q Consensus        77 ~-------~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~  139 (327)
                      +       ++|++|||||....      +.+++ ...+++|+.++..+.+++..    .+ ..++|++||...+...   
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~---  156 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRF-DLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPA---  156 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHH-HHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHH---
T ss_pred             HHHHHHcCCCCEEEECCCcccCCCcccCCHHHH-HHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCC---
Confidence            5       68999999997542      12233 37889999999999888754    33 5799999997765310   


Q ss_pred             CCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhC
Q 020334          140 VDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLG  216 (327)
Q Consensus       140 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~  216 (327)
                        +               .++...|+.||...+.+.+.++.++   |++++.+.||.+......           .....
T Consensus       157 --~---------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~-----------~~~~~  208 (274)
T 3e03_A          157 --W---------------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI-----------NMLPG  208 (274)
T ss_dssp             --H---------------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------C
T ss_pred             --C---------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh-----------hhccc
Confidence              0               0224579999999999999988774   899999999954332111           00011


Q ss_pred             CccccccccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          217 NREEYSILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       217 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                      ..  .     ..+..++|+|+++++++....
T Consensus       209 ~~--~-----~~~~~pedvA~~v~~l~s~~~  232 (274)
T 3e03_A          209 VD--A-----AACRRPEIMADAAHAVLTREA  232 (274)
T ss_dssp             CC--G-----GGSBCTHHHHHHHHHHHTSCC
T ss_pred             cc--c-----cccCCHHHHHHHHHHHhCccc
Confidence            11  1     136789999999999997643

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.87  E-value=4.1e-21  Score=167.20  Aligned_cols=220  Identities=19%  Similarity=0.162  Sum_probs=148.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhh-C---CCCCCCCeEEEeCCCCChhHHHHHhcC--
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLT-N---LPGASERLQIFNADLNDPESFDAAIAG--   78 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~---~~~~~~~~~~~~~D~~d~~~~~~~~~~--   78 (327)
                      +++||||||+|+||.+++++|+++|++|+++.| +........... .   ......++.++.+|++|.+++.++++.  
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYA-TLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEE-EESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEe-ecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            578999999999999999999999999988888 332322221111 0   001124789999999999999988864  


Q ss_pred             ---CCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           79 ---CAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        79 ---~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                         +|++|||||....      ..+++ ...+++|+.++.++++++    ++.+ .++||++||...+..          
T Consensus        81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~~----------  148 (327)
T 1jtv_A           81 EGRVDVLVCNAGLGLLGPLEALGEDAV-ASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMG----------  148 (327)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSC----------
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccccC----------
Confidence               8999999986432      11233 478999999999999885    3344 679999999865521          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCch----------HHHHHH
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE---HGLDLVTLIPSFVVGPFICPKFAGS----------VRSTLA  212 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~v~G~~~~~~~~~~----------~~~~~~  212 (327)
                                  .+....|+.||...+.+.+.++.+   .|+++++++||.|.++.........          ......
T Consensus       149 ------------~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (327)
T 1jtv_A          149 ------------LPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFY  216 (327)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHH
T ss_pred             ------------CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHH
Confidence                        122457999999999999998875   4899999999999887533211110          000000


Q ss_pred             HHhCC-ccccccccCCCeeeHHHHHHHHHHhhcCCCCCceEE
Q 020334          213 MVLGN-REEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYI  253 (327)
Q Consensus       213 ~~~~~-~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~  253 (327)
                      ..... ...+.    +-...++|+|+++++++..+.....|.
T Consensus       217 ~~~~~~~~~~~----~~~~~pedvA~~i~~l~~~~~~~~~~~  254 (327)
T 1jtv_A          217 QYLAHSKQVFR----EAAQNPEEVAEVFLTALRAPKPTLRYF  254 (327)
T ss_dssp             HHHHHHHHHHH----HHCBCHHHHHHHHHHHHHCSSCCSEEE
T ss_pred             HHHHHHHHhhh----hcCCCHHHHHHHHHHHHcCCCCCeEEE
Confidence            00000 00000    012589999999999998765444554

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.87  E-value=3.9e-21  Score=161.42  Aligned_cols=218  Identities=16%  Similarity=0.107  Sum_probs=152.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|.+|||||++.||.++++.|++.|++|++.+| +.+.... ..++      ..++..+.+|++|+++++++++     
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r-~~~~l~~~~~~~------g~~~~~~~~Dv~~~~~v~~~~~~~~~~  100 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGR-RKDVLDAAIAEI------GGGAVGIQADSANLAELDRLYEKVKAE  100 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHH------CTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHc------CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 4322222 2222      2567899999999998887764     


Q ss_pred             --CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 --GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 --~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                        ++|++||+||...      .+.++|. ..+++|+.++..+.+++.+.= +..++|++||..... +            
T Consensus       101 ~G~iDiLVNNAG~~~~~~~~~~~~e~w~-~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~-~------------  166 (273)
T 4fgs_A          101 AGRIDVLFVNAGGGSMLPLGEVTEEQYD-DTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGST-G------------  166 (273)
T ss_dssp             HSCEEEEEECCCCCCCCCTTSCCHHHHH-HHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGS-C------------
T ss_pred             cCCCCEEEECCCCCCCCChhhccHHHHH-HHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhcc-C------------
Confidence              5899999998644      2234555 889999999999999877541 245899999976542 1            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCch---HHHHHHHHhCCccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGS---VRSTLAMVLGNREEYS  222 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~  222 (327)
                               .+....|+.+|.....+.+.++.++   ||++..+.||.+..|.........   .......+. ...++.
T Consensus       167 ---------~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~~Plg  236 (273)
T 4fgs_A          167 ---------TPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALA-AQVPMG  236 (273)
T ss_dssp             ---------CTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHH-HHSTTS
T ss_pred             ---------CCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHH-hcCCCC
Confidence                     1224579999999999999998775   799999999999887533221111   111111111 112222


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                           .+..++|+|+++++++....  ..| .+.+.|.
T Consensus       237 -----R~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG  269 (273)
T 4fgs_A          237 -----RVGRAEEVAAAALFLASDDSSFVTGAELFVDGG  269 (273)
T ss_dssp             -----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCcCHHHHHHHHHHHhCchhcCccCCeEeECcC
Confidence                 57789999999999997643  234 4456544

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.87  E-value=5.8e-21  Score=167.08  Aligned_cols=210  Identities=19%  Similarity=0.227  Sum_probs=149.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-------hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-------DLSFLTNLPGASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++|+......       ....+...   ..++.++.+|++|++++.++++
T Consensus        45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~---g~~~~~~~~Dv~d~~~v~~~~~  121 (346)
T 3kvo_A           45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV---GGKALPCIVDVRDEQQISAAVE  121 (346)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc---CCeEEEEEccCCCHHHHHHHHH
Confidence            5789999999999999999999999999999994332111       11112111   3578899999999998887765


Q ss_pred             -------CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCC
Q 020334           78 -------GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDV  140 (327)
Q Consensus        78 -------~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~  140 (327)
                             ++|++|||||....      +.+.+ ...+++|+.++..+++++..    .+ ..+||++||...+...    
T Consensus       122 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~~----  195 (346)
T 3kvo_A          122 KAIKKFGGIDILVNNASAISLTNTLDTPTKRL-DLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPV----  195 (346)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHH-HHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCGG----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCCC----
Confidence                   78999999996542      12233 37899999999999998753    33 5799999998765310    


Q ss_pred             CcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc
Q 020334          141 DMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR  218 (327)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~  218 (327)
                       +               ......|+.+|...+.+.+.++.++  +++++.+.|+.+....       .    .....+ .
T Consensus       196 -~---------------~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~-------~----~~~~~~-~  247 (346)
T 3kvo_A          196 -W---------------FKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA-------A----MDMLGG-P  247 (346)
T ss_dssp             -G---------------TSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH-------H----HHHHCC--
T ss_pred             -C---------------CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH-------H----HHhhcc-c
Confidence             0               1335679999999999999998875  7999999999633321       1    111111 1


Q ss_pred             cccccccCCCeeeHHHHHHHHHHhhcCCC-CCceEEEec
Q 020334          219 EEYSILLNISMVHIDDVARAHIFLLEYPD-AKGRYICSS  256 (327)
Q Consensus       219 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~y~~~~  256 (327)
                      ...     ..+..++|+|+++++++.... ..|.+.+.+
T Consensus       248 ~~~-----~r~~~pedvA~~v~~L~s~~~~itG~~ivdg  281 (346)
T 3kvo_A          248 GIE-----SQCRKVDIIADAAYSIFQKPKSFTGNFVIDE  281 (346)
T ss_dssp             -CG-----GGCBCTHHHHHHHHHHHTSCTTCCSCEEEHH
T ss_pred             ccc-----ccCCCHHHHHHHHHHHHhcCCCCCceEEECC
Confidence            111     147789999999999998722 245554543

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.87  E-value=3e-21  Score=161.70  Aligned_cols=197  Identities=17%  Similarity=0.150  Sum_probs=142.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCC--CChhHHHHHhc----
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADL--NDPESFDAAIA----   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~--~d~~~~~~~~~----   77 (327)
                      +|++|||||+|+||.+++++|+++|++|++++| +....... ..+....  ..++.++.+|+  +|.+++.++++    
T Consensus        14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~--~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGR-TEASLAEVSDQIKSAG--QPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTT--SCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEec-CHHHHHHHHHHHHhcC--CCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999 43332222 2222211  13567777777  88887776654    


Q ss_pred             ---CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 ---GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ---~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                         ++|++||+||....       +.+++ .+.+++|+.++..+++++.    +.+ ..++|++||...+..        
T Consensus        91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~--------  160 (247)
T 3i1j_A           91 EFGRLDGLLHNASIIGPRTPLEQLPDEDF-MQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKG--------  160 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCSCGGGSCHHHH-HHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSC--------
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCC--------
Confidence               78999999997431       12233 3789999999999998874    333 579999999765421        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH----GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNRE  219 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (327)
                                    .++...|+.+|...+.+++.++.++    +++++.++||.+..+..            ........
T Consensus       161 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~------------~~~~~~~~  214 (247)
T 3i1j_A          161 --------------RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMR------------AQAYPDEN  214 (247)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHH------------HHHSTTSC
T ss_pred             --------------CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccc------------hhcccccC
Confidence                          1335679999999999999988764    68999999998866521            11111111


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      .      ..+..++|+|+++++++...
T Consensus       215 ~------~~~~~p~dva~~~~~l~s~~  235 (247)
T 3i1j_A          215 P------LNNPAPEDIMPVYLYLMGPD  235 (247)
T ss_dssp             G------GGSCCGGGGTHHHHHHHSGG
T ss_pred             c------cCCCCHHHHHHHHHHHhCch
Confidence            1      14667899999999998753

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.86  E-value=8.1e-21  Score=156.48  Aligned_cols=218  Identities=17%  Similarity=0.188  Sum_probs=154.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~   81 (327)
                      .+|++|||||++.||.++++.|++.|++|.+.+|+..  ......+...   ..++..+.+|++|+++++++++  ++|+
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~---g~~~~~~~~Dv~d~~~v~~~~~~g~iDi   82 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD---GGNASALLIDFADPLAAKDSFTDAGFDI   82 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT---TCCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh---CCcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence            4689999999999999999999999999999999432  2223333322   3578999999999998887765  6899


Q ss_pred             EEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCCCCCh
Q 020334           82 VIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDE  151 (327)
Q Consensus        82 vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~  151 (327)
                      +|||||...      .+.++|. ..+++|+.++..+.+++.    +.++..++|++||..... +               
T Consensus        83 LVNNAGi~~~~~~~~~~~~~w~-~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~-g---------------  145 (247)
T 4hp8_A           83 LVNNAGIIRRADSVEFSELDWD-EVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQ-G---------------  145 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-C---------------
T ss_pred             EEECCCCCCCCCcccccHHHHH-HHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCC-C---------------
Confidence            999998754      2334565 889999999888877643    333347999999976542 1               


Q ss_pred             hHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCC
Q 020334          152 DYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNIS  228 (327)
Q Consensus       152 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (327)
                            .+....|+.||.....+.+.++.++   ||++..+-||.+-.|.........  .....+. ...++.     .
T Consensus       146 ------~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~--~~~~~~~-~~~Plg-----R  211 (247)
T 4hp8_A          146 ------GIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADA--ARNKAIL-ERIPAG-----R  211 (247)
T ss_dssp             ------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSH--HHHHHHH-TTCTTS-----S
T ss_pred             ------CCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCH--HHHHHHH-hCCCCC-----C
Confidence                  1224579999999999999888765   899999999999877422100000  0111111 122222     5


Q ss_pred             eeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 020334          229 MVHIDDVARAHIFLLEYPDA--KG-RYICSSA  257 (327)
Q Consensus       229 ~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~~  257 (327)
                      +..++|+|.++++++.....  .| .+.+.|.
T Consensus       212 ~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG  243 (247)
T 4hp8_A          212 WGHSEDIAGAAVFLSSAAADYVHGAILNVDGG  243 (247)
T ss_dssp             CBCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCchhcCCcCCeEEECcc
Confidence            78899999999999876432  33 4556543

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.86  E-value=4.9e-20  Score=154.43  Aligned_cols=213  Identities=15%  Similarity=0.119  Sum_probs=147.2

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +.+|++|||||++.||.++++.|+++|++|++.+|+..+..             ....++++|++|+++++++++     
T Consensus         9 L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-------------~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (261)
T 4h15_A            9 LRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL-------------PEELFVEADLTTKEGCAIVAEATRQR   75 (261)
T ss_dssp             CTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS-------------CTTTEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC-------------CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999433211             234578899999998877664     


Q ss_pred             --CCCEEEEccCCCCC--------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 --GCAGVIHVAAPIDI--------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 --~~d~vih~a~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                        ++|++||+||....        +.+++. ..+++|+.++..+.+++.    +.+ ..++|++||.......       
T Consensus        76 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~-~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~~-------  146 (261)
T 4h15_A           76 LGGVDVIVHMLGGSSAAGGGFSALSDDDWY-NELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLPL-------  146 (261)
T ss_dssp             TSSCSEEEECCCCCCCCSSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-------
T ss_pred             cCCCCEEEECCCCCccCCCCcccCCHHHHH-HHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccCC-------
Confidence              58999999985431        223444 789999999877776554    444 5799999997643200       


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC--------C--chHHHH
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKF--------A--GSVRST  210 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~--------~--~~~~~~  210 (327)
                                    +.....|+.||...+.+.+.++.++   ||++..+.||.+-.|......        .  ......
T Consensus       147 --------------~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~  212 (261)
T 4h15_A          147 --------------PESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKI  212 (261)
T ss_dssp             --------------TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred             --------------CCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHH
Confidence                          1124579999999999999888764   899999999988776311000        0  000001


Q ss_pred             HHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--C-CceEEEecc
Q 020334          211 LAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--A-KGRYICSSA  257 (327)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~~  257 (327)
                      .... ....++.     .+..++|+|+++++++....  . |..+.+.|.
T Consensus       213 ~~~~-~~~~Plg-----R~g~peevA~~v~fLaS~~a~~itG~~i~VDGG  256 (261)
T 4h15_A          213 IMDG-LGGIPLG-----RPAKPEEVANLIAFLASDRAASITGAEYTIDGG  256 (261)
T ss_dssp             HHHH-TTCCTTS-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHH-hcCCCCC-----CCcCHHHHHHHHHHHhCchhcCccCcEEEECCc
Confidence            1111 1112222     58899999999999996543  2 335566654

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.86  E-value=1.5e-20  Score=162.76  Aligned_cols=220  Identities=17%  Similarity=0.181  Sum_probs=147.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh-hHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP-ESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~------   77 (327)
                      +++||||||+|+||.+++++|+++|++|++++|+..........+....  ..++.++.+|++|+ +.+.++++      
T Consensus        12 ~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           12 RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN--HENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999993322222233333221  24789999999998 76665553      


Q ss_pred             -CCCEEEEccCCCCC------------------------------------CCCchHHHHHHHHHhHHHHHHHHHHh---
Q 020334           78 -GCAGVIHVAAPIDI------------------------------------DGKETEEVMTQRAVNGTIGILKSCLK---  117 (327)
Q Consensus        78 -~~d~vih~a~~~~~------------------------------------~~~~~~~~~~~~nv~~~~~l~~~~~~---  117 (327)
                       ++|++|||||....                                    ..+.+ ...+++|+.++..+++++..   
T Consensus        90 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           90 GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELA-EECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHH-HHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhh-hhheeeeeehHHHHHHHhhHhhc
Confidence             78999999997532                                    11122 36799999998888887753   


Q ss_pred             -cCCccEEEEeccceeeeecCCCC----CcccCCCCCChhH-----------------hhhcCCCchhhHhhhHHHHHHH
Q 020334          118 -SGTVKRFVYTSSGSTVYFSGKDV----DMLDETFWSDEDY-----------------IRKLDIWGKSYVLTKTLTERAA  175 (327)
Q Consensus       118 -~~~~~~~v~~SS~~v~~~~~~~~----~~~~E~~~~~~~~-----------------~~~~~~~~~~Y~~sK~~~e~~~  175 (327)
                       .+ ..+||++||...+.......    ...+++.+.....                 ......+...|+.||...+.++
T Consensus       169 ~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~  247 (311)
T 3o26_A          169 LSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT  247 (311)
T ss_dssp             TSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHH
T ss_pred             cCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHH
Confidence             33 57999999987653110000    0000000000000                 0000133468999999999999


Q ss_pred             HHHHHHc-CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCceE
Q 020334          176 LEFAEEH-GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKGRY  252 (327)
Q Consensus       176 ~~~~~~~-~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~y  252 (327)
                      +.++.++ +++++.+.||.|.++.....                         .....++.++.++.++..+.  .++.|
T Consensus       248 ~~la~e~~~i~v~~v~PG~v~T~~~~~~-------------------------~~~~~~~~a~~~~~~~~~~~~~~~g~~  302 (311)
T 3o26_A          248 RVLANKIPKFQVNCVCPGLVKTEMNYGI-------------------------GNYTAEEGAEHVVRIALFPDDGPSGFF  302 (311)
T ss_dssp             HHHHHHCTTSEEEEECCCSBCSGGGTTC-------------------------CSBCHHHHHHHHHHHHTCCSSCCCSCE
T ss_pred             HHHHhhcCCceEEEecCCceecCCcCCC-------------------------CCCCHHHHHHHHHHHHhCCCCCCCceE
Confidence            9999886 79999999999987742210                         12467889998888876543  23444


Q ss_pred             E
Q 020334          253 I  253 (327)
Q Consensus       253 ~  253 (327)
                      .
T Consensus       303 ~  303 (311)
T 3o26_A          303 Y  303 (311)
T ss_dssp             E
T ss_pred             e
Confidence            4

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.86  E-value=3.9e-21  Score=162.19  Aligned_cols=210  Identities=15%  Similarity=0.055  Sum_probs=144.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHH---CCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLD---HGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      +|++|||||+|+||.+++++|++   +|++|++++| +...... ...+.... ...++.++.+|++|++++.++++   
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r-~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSAR-SESMLRQLKEELGAQQ-PDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEES-CHHHHHHHHHHHHHHC-TTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeC-CHHHHHHHHHHHHhhC-CCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            57899999999999999999999   8999999999 4322221 12221100 01468899999999998877653   


Q ss_pred             ------CCC--EEEEccCCCCC---------CCCchHHHHHHHHHhHHHHHHHHHHhcC-----CccEEEEeccceeeee
Q 020334           78 ------GCA--GVIHVAAPIDI---------DGKETEEVMTQRAVNGTIGILKSCLKSG-----TVKRFVYTSSGSTVYF  135 (327)
Q Consensus        78 ------~~d--~vih~a~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-----~~~~~v~~SS~~v~~~  135 (327)
                            ++|  ++|||||....         +.+++ ...+++|+.++.++++++.+.-     ...+||++||...+..
T Consensus        84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEV-NNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHH-HHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             hccccccCCccEEEECCcccCCCCcchhccCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC
Confidence                  358  99999996431         11233 3789999999999999886531     1468999999876521


Q ss_pred             cCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc-CCcEEEEecCceecCCCCCCCC-chHHHHHHH
Q 020334          136 SGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH-GLDLVTLIPSFVVGPFICPKFA-GSVRSTLAM  213 (327)
Q Consensus       136 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~R~~~v~G~~~~~~~~-~~~~~~~~~  213 (327)
                                            .++...|+.+|...+.+.+.++.++ +++++.+.||.+-.+....... ..-......
T Consensus       163 ----------------------~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  220 (259)
T 1oaa_A          163 ----------------------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSK  220 (259)
T ss_dssp             ----------------------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHH
T ss_pred             ----------------------CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHH
Confidence                                  1335679999999999999999876 5899999999876652110000 000000000


Q ss_pred             HhCCccccccccCCCeeeHHHHHHHHHHhhcC
Q 020334          214 VLGNREEYSILLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       214 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                      ... ..+.     ..+..++|+|+++++++..
T Consensus       221 ~~~-~~p~-----~~~~~p~dvA~~v~~l~~~  246 (259)
T 1oaa_A          221 LQK-LKSD-----GALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             HHH-HHHT-----TCSBCHHHHHHHHHHHHHH
T ss_pred             HHH-hhhc-----CCcCCHHHHHHHHHHHHhh
Confidence            000 0011     2578999999999999864

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.86  E-value=9e-20  Score=153.23  Aligned_cols=224  Identities=13%  Similarity=0.051  Sum_probs=153.7

Q ss_pred             CCCCCCeEEEeCCcc--hhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-
Q 020334            1 MEEQKGKVCVTGGTG--FIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-   77 (327)
                      |.+.+|++|||||+|  .||.++++.|+++|++|++.+| +......+....... ...++.++.+|++|++++.++++ 
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~   79 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYR-KERSRKELEKLLEQL-NQPEAHLYQIDVQSDEEVINGFEQ   79 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHHGGG-TCSSCEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc-CCCcEEEEEccCCCHHHHHHHHHH
Confidence            345578999999887  8999999999999999999999 443333333222111 12478899999999998877664 


Q ss_pred             ------CCCEEEEccCCCCC----------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCC
Q 020334           78 ------GCAGVIHVAAPIDI----------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDV  140 (327)
Q Consensus        78 ------~~d~vih~a~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~  140 (327)
                            ++|++||+||....          ..+++. ..+++|+.++..+...+...- +..++|++||......     
T Consensus        80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~-~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~-----  153 (256)
T 4fs3_A           80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFL-LAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFA-----  153 (256)
T ss_dssp             HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSC-----
T ss_pred             HHHHhCCCCEEEeccccccccccccccccCCHHHHH-HHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccC-----
Confidence                  68999999986431          111222 557888888888887776542 2469999999764320     


Q ss_pred             CcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCC
Q 020334          141 DMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGN  217 (327)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~  217 (327)
                                       .+....|+.+|...+.+.+.++.++   ||++..+.||.+-.|...... . .......... 
T Consensus       154 -----------------~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~-~-~~~~~~~~~~-  213 (256)
T 4fs3_A          154 -----------------VQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG-G-FNTILKEIKE-  213 (256)
T ss_dssp             -----------------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT-T-HHHHHHHHHH-
T ss_pred             -----------------cccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc-C-CHHHHHHHHh-
Confidence                             1234579999999999999888764   899999999999887543311 1 1111221111 


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      ..++.     .+..++|+|+++++++....  ..| .+.+.|.
T Consensus       214 ~~Pl~-----R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG  251 (256)
T 4fs3_A          214 RAPLK-----RNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG  251 (256)
T ss_dssp             HSTTS-----SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCCC-----CCcCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence            11222     57789999999999997543  234 4556544

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.85  E-value=6.5e-22  Score=172.24  Aligned_cols=177  Identities=15%  Similarity=0.076  Sum_probs=127.7

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCC-------eEEEEEcCCCC--Ccc-hhhhhhCCCCCCCCeEEEeCCCCChh
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGY-------FVTTTVRSDPE--HKK-DLSFLTNLPGASERLQIFNADLNDPE   70 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~   70 (327)
                      |. ++|||+||||+||||++++..|+++|+       +|.++++ .+.  ... ....+..     ..+.++ +|+.+..
T Consensus         1 m~-~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~-~~~~~~~~g~~~dl~~-----~~~~~~-~di~~~~   72 (327)
T 1y7t_A            1 MK-APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEI-PQAMKALEGVVMELED-----CAFPLL-AGLEATD   72 (327)
T ss_dssp             CC-CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC-GGGHHHHHHHHHHHHT-----TTCTTE-EEEEEES
T ss_pred             CC-CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeC-CCchhhccchhhhhhc-----cccccc-CCeEecc
Confidence            44 356899999999999999999999886       8999888 321  111 1112211     112223 5777766


Q ss_pred             HHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCccc-CCCC
Q 020334           71 SFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLD-ETFW  148 (327)
Q Consensus        71 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~-E~~~  148 (327)
                      .+.+.++++|+|||+||.......... ++++.|+.++.++++++++.+ ...+++++|+..-.      ..++. |..+
T Consensus        73 ~~~~a~~~~D~Vih~Ag~~~~~~~~~~-~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~------~~~~~~~~~~  145 (327)
T 1y7t_A           73 DPKVAFKDADYALLVGAAPRKAGMERR-DLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANT------NALIAYKNAP  145 (327)
T ss_dssp             CHHHHTTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH------HHHHHHHTCT
T ss_pred             ChHHHhCCCCEEEECCCcCCCCCCCHH-HHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhh------hHHHHHHHcC
Confidence            677888999999999997654444444 899999999999999999974 34588888764310      01111 1110


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                              ..+|.++|+.+|+.+|++...+++.+|++.+++|+++||||+..
T Consensus       146 --------~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~  189 (327)
T 1y7t_A          146 --------GLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS  189 (327)
T ss_dssp             --------TSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred             --------CCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence                    02456679999999999999999888999999999999999754

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.85  E-value=3.6e-20  Score=167.58  Aligned_cols=215  Identities=15%  Similarity=0.083  Sum_probs=148.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      ..+++|||||+|.||.+++++|+++|++|++++| +... ..+......    .+++++.+|++|.+++.++++      
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r-~~~~-~~l~~~~~~----~~~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDV-DGAA-EDLKRVADK----VGGTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEEC-GGGH-HHHHHHHHH----HTCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeC-CccH-HHHHHHHHH----cCCeEEEEecCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999998 3221 222222111    246789999999998887664      


Q ss_pred             -C-CCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcC---CccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -G-CAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSG---TVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~-~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       + +|+|||+||....      +.+.+. ..+++|+.++.++.+++....   +..+||++||...+..           
T Consensus       286 g~~id~lV~nAGv~~~~~~~~~~~~~~~-~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g-----------  353 (454)
T 3u0b_A          286 GGKVDILVNNAGITRDKLLANMDEKRWD-AVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAG-----------  353 (454)
T ss_dssp             TTCCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHC-----------
T ss_pred             CCCceEEEECCcccCCCccccCCHHHHH-HHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCC-----------
Confidence             3 8999999997642      223333 789999999999999988651   2579999999876521           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .+....|+.+|...+.+.+.++.++   |++++.+.||.+.++..... +.........    ....  
T Consensus       354 -----------~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~----~~~l--  415 (454)
T 3u0b_A          354 -----------NRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI-PLATREVGRR----LNSL--  415 (454)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----------CHHHHH----SBTT--
T ss_pred             -----------CCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc-chhhHHHHHh----hccc--
Confidence                       1235679999998888888887654   89999999999988753221 1110011110    0111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                         ..+..++|+++++++++....   .+.++++.|+
T Consensus       416 ---~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG  449 (454)
T 3u0b_A          416 ---FQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQ  449 (454)
T ss_dssp             ---SSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSS
T ss_pred             ---cCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCc
Confidence               246789999999999987532   2335566554

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.84  E-value=1.9e-20  Score=170.94  Aligned_cols=221  Identities=21%  Similarity=0.194  Sum_probs=153.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCe-EEEEEcCCCCC--cch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCC-
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYF-VTTTVRSDPEH--KKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIAGC-   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~--~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-   79 (327)
                      +++||||||+|+||.+++++|+++|++ |++++|+.+..  ... ...+...   ..++.++.+|++|++++.++++++ 
T Consensus       226 ~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~---g~~v~~~~~Dv~d~~~v~~~~~~i~  302 (486)
T 2fr1_A          226 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL---GARTTVAACDVTDRESVRELLGGIG  302 (486)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc---CCEEEEEEeCCCCHHHHHHHHHHHH
Confidence            578999999999999999999999995 99999943211  111 1222221   247889999999999999888754 


Q ss_pred             -----CEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           80 -----AGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        80 -----d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                           |+|||+||.....     ..+.....++.|+.++.++.+++++.+ .++||++||...+...             
T Consensus       303 ~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~SS~a~~~g~-------------  368 (486)
T 2fr1_A          303 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGA-------------  368 (486)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCC-------------
T ss_pred             hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcChHhcCCC-------------
Confidence                 9999999975421     112233778899999999999998876 8899999997654211             


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCe
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISM  229 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (327)
                               .....|+.+|...+.+...+.. .|+++++++|+.+.+++....   ..   ......        ....+
T Consensus       369 ---------~g~~~Yaaaka~l~~la~~~~~-~gi~v~~i~pG~~~~~gm~~~---~~---~~~~~~--------~g~~~  424 (486)
T 2fr1_A          369 ---------PGLGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMAEG---PV---ADRFRR--------HGVIE  424 (486)
T ss_dssp             ---------TTCTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC------------------CTT--------TTEEC
T ss_pred             ---------CCCHHHHHHHHHHHHHHHHHHh-cCCeEEEEECCeeCCCcccch---hH---HHHHHh--------cCCCC
Confidence                     2235699999999988876654 699999999999987642210   00   000000        11358


Q ss_pred             eeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHH
Q 020334          230 VHIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSA  270 (327)
Q Consensus       230 i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~  270 (327)
                      ++++|+++++..++..+..  .+.+.  .+.+..+...+..
T Consensus       425 i~~e~~a~~l~~~l~~~~~--~~~v~--~~d~~~~~~~~~~  461 (486)
T 2fr1_A          425 MPPETACRALQNALDRAEV--CPIVI--DVRWDRFLLAYTA  461 (486)
T ss_dssp             BCHHHHHHHHHHHHHTTCS--SCEEC--EECHHHHHHHHTS
T ss_pred             CCHHHHHHHHHHHHhCCCC--eEEEE--eCCHHHHhhhhcc
Confidence            9999999999999987543  22222  2456676665543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.84  E-value=1e-19  Score=166.74  Aligned_cols=222  Identities=19%  Similarity=0.184  Sum_probs=156.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCc---chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC--
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHK---KDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG--   78 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--   78 (327)
                      +++||||||+|+||.+++++|+++|+ +|++++|+.+...   .....+...   ..++.++.+|++|.+++.+++++  
T Consensus       259 ~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~---g~~v~~~~~Dvtd~~~v~~~~~~~~  335 (511)
T 2z5l_A          259 SGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH---GCEVVHAACDVAERDALAALVTAYP  335 (511)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT---TCEEEEEECCSSCHHHHHHHHHHSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc---CCEEEEEEeCCCCHHHHHHHHhcCC
Confidence            57899999999999999999999999 5888999432111   111222221   34688999999999999998874  


Q ss_pred             CCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhc-CCccEEEEeccceeeeecCCCCCcccCCCCCChh
Q 020334           79 CAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKS-GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDED  152 (327)
Q Consensus        79 ~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~  152 (327)
                      +|+|||+||.....     ..+.....++.|+.++.++.+++... + .++||++||...+. +                
T Consensus       336 ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~-~~~~V~~SS~a~~~-g----------------  397 (511)
T 2z5l_A          336 PNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKG-LDAFVLFSSVTGTW-G----------------  397 (511)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTT-CCCEEEEEEGGGTT-C----------------
T ss_pred             CcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeCHHhcC-C----------------
Confidence            99999999975422     11223377899999999999998876 4 78999999975432 1                


Q ss_pred             HhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeH
Q 020334          153 YIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHI  232 (327)
Q Consensus       153 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  232 (327)
                           ......|+.+|...+.+++.+. ..|+++++++||.+-+.+...   ....   .....        ....++++
T Consensus       398 -----~~g~~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~~---~~~~---~~~~~--------~g~~~l~~  457 (511)
T 2z5l_A          398 -----NAGQGAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGGMAA---GAGE---ESLSR--------RGLRAMDP  457 (511)
T ss_dssp             -----CTTBHHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCCC---CHHH---HHHHH--------HTBCCBCH
T ss_pred             -----CCCCHHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCcccc---cccH---HHHHh--------cCCCCCCH
Confidence                 1224579999999999988764 469999999999874332211   1111   11110        11257899


Q ss_pred             HHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHh
Q 020334          233 DDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAK  271 (327)
Q Consensus       233 ~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~~  271 (327)
                      +|+++++..++..+..  .+.+.  .+.+..+...+...
T Consensus       458 e~~a~~l~~al~~~~~--~v~v~--~~d~~~~~~~~~~~  492 (511)
T 2z5l_A          458 DAAVDALLGAMGRNDV--CVTVV--DVDWERFAPATNAI  492 (511)
T ss_dssp             HHHHHHHHHHHHHTCS--EEEEC--CBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCC--EEEEE--eCCHHHHHhhhccc
Confidence            9999999999987532  22232  34577776666544

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.83  E-value=1.5e-19  Score=150.94  Aligned_cols=213  Identities=15%  Similarity=0.124  Sum_probs=138.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEE-E--cCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHH-HHh---c
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTT-V--RSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFD-AAI---A   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~-~~~---~   77 (327)
                      +|++|||||+|+||.+++++|+++|++|+++ +  | +++........  .    .+....  |..+.+.+. ++.   .
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r-~~~~~~~~~~~--~----~~~~~~--~~~~v~~~~~~~~~~~g   71 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFA-DAAERQRFESE--N----PGTIAL--AEQKPERLVDATLQHGE   71 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGG-SHHHHHHHHHH--S----TTEEEC--CCCCGGGHHHHHGGGSS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcC-CHHHHHHHHHH--h----CCCccc--CHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999 5  8 43222221111  0    122222  444443332 232   2


Q ss_pred             CCCEEEEccCCCCC---C------CCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 GCAGVIHVAAPIDI---D------GKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 ~~d~vih~a~~~~~---~------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                      ++|++||+||....   .      .+++ ...+++|+.++..+++++.    +.+ .++||++||...+..         
T Consensus        72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~---------  140 (244)
T 1zmo_A           72 AIDTIVSNDYIPRPMNRLPLEGTSEADI-RQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKP---------  140 (244)
T ss_dssp             CEEEEEECCCCCTTGGGCCSTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSC---------
T ss_pred             CCCEEEECCCcCCCCCCCCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCC---------
Confidence            68999999986433   1      1233 3789999999999888775    333 579999999876531         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHH--HHHHHHhCCcc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVR--STLAMVLGNRE  219 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~--~~~~~~~~~~~  219 (327)
                                   .+....|+.+|...+.+.+.++.++   |+++++++||.+..+....  ...+.  ...........
T Consensus       141 -------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~~~  205 (244)
T 1zmo_A          141 -------------LAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFP--TSDWENNPELRERVDRDV  205 (244)
T ss_dssp             -------------CTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBC--HHHHHHCHHHHHHHHHHC
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc--cccccchHHHHHHHhcCC
Confidence                         1224579999999999999988764   8999999999998774200  01010  00111110001


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPDA--KG-RYICSSA  257 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~~  257 (327)
                      +.     ..+..++|+|+++++++.....  .| .+.+.|.
T Consensus       206 p~-----~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG  241 (244)
T 1zmo_A          206 PL-----GRLGRPDEMGALITFLASRRAAPIVGQFFAFTGG  241 (244)
T ss_dssp             TT-----CSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred             CC-----CCCcCHHHHHHHHHHHcCccccCccCCEEEeCCC
Confidence            11     1578999999999999976432  24 4456544

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.83  E-value=1e-19  Score=154.32  Aligned_cols=219  Identities=12%  Similarity=0.007  Sum_probs=149.3

Q ss_pred             CCeEEEeCC--cchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGG--TGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +|++|||||  +|+||.+++++|+++|++|++++| +....  +..+....  ..++.++.+|++|+++++++++     
T Consensus         7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r-~~~~~--~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (269)
T 2h7i_A            7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGF-DRLRL--IQRITDRL--PAKAPLLELDVQNEEHLASLAGRVTEA   81 (269)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEEC-SCHHH--HHHHHTTS--SSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEec-ChHHH--HHHHHHhc--CCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999  999999999999999999999999 43221  11221111  2367889999999998887765     


Q ss_pred             -----CCCEEEEccCCCC-----------CCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCC
Q 020334           78 -----GCAGVIHVAAPID-----------IDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDV  140 (327)
Q Consensus        78 -----~~d~vih~a~~~~-----------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~  140 (327)
                           ++|++|||||...           .+.+++. ..+++|+.++..+++++.+.- ...+||++||...++      
T Consensus        82 ~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~------  154 (269)
T 2h7i_A           82 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVS-KGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA------  154 (269)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC------
T ss_pred             hCCCCCceEEEECCccCccccccccccccCCHHHHH-HHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc------
Confidence                 7899999998643           1122333 778999999999999987642 125999999865431      


Q ss_pred             CcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC----CCchHH----H
Q 020334          141 DMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPK----FAGSVR----S  209 (327)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~----~~~~~~----~  209 (327)
                                       .+....|+.+|...+.+.+.++.++   |++++.++||.+..+.....    ......    .
T Consensus       155 -----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  217 (269)
T 2h7i_A          155 -----------------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQL  217 (269)
T ss_dssp             -----------------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHH
T ss_pred             -----------------cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHH
Confidence                             1234579999999999999988764   89999999999877631100    000000    0


Q ss_pred             HHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          210 TLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      ....... ..+.    .+.+..++|+|+++++++....  ..| .+.+.|.
T Consensus       218 ~~~~~~~-~~p~----~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  263 (269)
T 2h7i_A          218 LEEGWDQ-RAPI----GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG  263 (269)
T ss_dssp             HHHHHHH-HCTT----CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred             HHHhhhc-cCCc----ccCCCCHHHHHHHHHHHhCchhccCcceEEEecCC
Confidence            0010100 0011    1136788999999999997543  234 4456543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.82  E-value=1.2e-19  Score=157.17  Aligned_cols=204  Identities=14%  Similarity=0.160  Sum_probs=138.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCC--------CCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHH
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSD--------PEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDA   74 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~   74 (327)
                      .+|++|||||+|+||.+++++|+++|++|++.+|..        ...... ...+...     . ....+|+.|.+++.+
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~-----~-~~~~~D~~~~~~~~~   81 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-----G-GKAVANYDSVEAGEK   81 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-----T-CEEEEECCCGGGHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh-----C-CeEEEeCCCHHHHHH
Confidence            357899999999999999999999999999986621        111111 1122111     1 123579999876655


Q ss_pred             Hh-------cCCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecC
Q 020334           75 AI-------AGCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSG  137 (327)
Q Consensus        75 ~~-------~~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~  137 (327)
                      ++       .++|++||+||.....      .+.+. ..+++|+.++.++++++.    +.+ ..+||++||..... + 
T Consensus        82 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~-~-  157 (319)
T 1gz6_A           82 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWD-IIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIY-G-  157 (319)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH-C-
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcc-C-
Confidence            54       2689999999965422      22333 789999999888888764    344 57999999975432 1 


Q ss_pred             CCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHH
Q 020334          138 KDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV  214 (327)
Q Consensus       138 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~  214 (327)
                                          .++...|+.+|...+.+.+.++.++   |+++++++|+.+ .+......+.   .     
T Consensus       158 --------------------~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~~---~-----  208 (319)
T 1gz6_A          158 --------------------NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMPE---D-----  208 (319)
T ss_dssp             --------------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSCH---H-----
T ss_pred             --------------------CCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCCh---h-----
Confidence                                1224579999999999999988764   899999999976 4321100000   0     


Q ss_pred             hCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCceEEEecc
Q 020334          215 LGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKGRYICSSA  257 (327)
Q Consensus       215 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~y~~~~~  257 (327)
                            .     ..++.++|+|.++++++..+.  .+.+|++++.
T Consensus       209 ------~-----~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          209 ------L-----VEALKPEYVAPLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             ------H-----HHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             ------h-----hccCCHHHHHHHHHHHhCchhhcCCCEEEECCC
Confidence                  0     124678899999999987642  2345666554

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.82  E-value=9.6e-19  Score=150.47  Aligned_cols=224  Identities=11%  Similarity=0.013  Sum_probs=141.5

Q ss_pred             CCCCCeEEEeCCc--chhHHHHHHHHHHCCCeEEEEEcCC----------CCCcchhhhhhCCCCCCCCeEEEeCC----
Q 020334            2 EEQKGKVCVTGGT--GFIGSWLIMRLLDHGYFVTTTVRSD----------PEHKKDLSFLTNLPGASERLQIFNAD----   65 (327)
Q Consensus         2 ~~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~----------~~~~~~~~~~~~~~~~~~~~~~~~~D----   65 (327)
                      ...+|++|||||+  |+||.+++++|+++|++|++++|+.          .........+... ........+.+|    
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDG-SLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTS-SBCCEEEEEEECTTCC
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccc-cccccccccccceecc
Confidence            3346789999999  9999999999999999999998621          1111111111100 000012333333    


Q ss_pred             ----CC----C--------hhHHHHHh-------cCCCEEEEccCCCC--------CCCCchHHHHHHHHHhHHHHHHHH
Q 020334           66 ----LN----D--------PESFDAAI-------AGCAGVIHVAAPID--------IDGKETEEVMTQRAVNGTIGILKS  114 (327)
Q Consensus        66 ----~~----d--------~~~~~~~~-------~~~d~vih~a~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~  114 (327)
                          +.    |        ++++.+++       .++|++|||||...        .+.+++. ..+++|+.++..++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~  162 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYL-AAISASSYSFVSLLSH  162 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHH-HHHHHHTHHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHH-HHHHHhhhHHHHHHHH
Confidence                22    1        33344333       36899999998531        1222343 7899999999999999


Q ss_pred             HHhcC-CccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc-hhhHhhhHHHHHHHHHHHHH----cCCcEEE
Q 020334          115 CLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG-KSYVLTKTLTERAALEFAEE----HGLDLVT  188 (327)
Q Consensus       115 ~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~-~~Y~~sK~~~e~~~~~~~~~----~~~~~~i  188 (327)
                      +.+.- ...++|++||...+...                      +.. ..|+.+|...+.+.+.++.+    .|++++.
T Consensus       163 ~~~~m~~~g~iv~isS~~~~~~~----------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~  220 (297)
T 1d7o_A          163 FLPIMNPGGASISLTYIASERII----------------------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNT  220 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGGTSCC----------------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred             HHHHhccCceEEEEeccccccCC----------------------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEE
Confidence            98651 12689999997654210                      112 36999999999999888765    5899999


Q ss_pred             EecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 020334          189 LIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD---AKGRYICSSA  257 (327)
Q Consensus       189 ~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  257 (327)
                      ++||.+.+|.....  ............. .+.     ..+..++|+|+++++++....   .+..+++.+.
T Consensus       221 v~PG~v~T~~~~~~--~~~~~~~~~~~~~-~p~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG  284 (297)
T 1d7o_A          221 ISAGPLGSRAAKAI--GFIDTMIEYSYNN-API-----QKTLTADEVGNAAAFLVSPLASAITGATIYVDNG  284 (297)
T ss_dssp             EEECCCBCCCSSCC--SHHHHHHHHHHHH-SSS-----CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             Eeccccccchhhhc--cccHHHHHHhhcc-CCC-----CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            99999999864321  1111111111111 111     147799999999999987532   2345667554

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.80  E-value=4.3e-19  Score=161.44  Aligned_cols=204  Identities=21%  Similarity=0.193  Sum_probs=147.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCc---chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHK---KDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |++++|||||+|+||.+++++|+++|+ .|+++.|+.+...   .....+...   ..++.++.+|++|++++.++++  
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~---g~~v~~~~~Dvtd~~~v~~~~~~i  314 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL---GVRVTIAACDAADREALAALLAEL  314 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc---CCeEEEEEccCCCHHHHHHHHHHH
Confidence            348999999999999999999999998 7888888432211   111222221   3578999999999999998885  


Q ss_pred             ----CCCEEEEccCCC-CCC-----CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 ----GCAGVIHVAAPI-DID-----GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ----~~d~vih~a~~~-~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                          .+|+|||+||.. ...     ..+.....++.|+.++.++.+.++... .++||++||...+. +           
T Consensus       315 ~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a~~~-g-----------  381 (496)
T 3mje_A          315 PEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFVLFSSGAAVW-G-----------  381 (496)
T ss_dssp             CTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHHHHT-T-----------
T ss_pred             HHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChHhcC-C-----------
Confidence                379999999976 311     112224789999999999999999876 78999999976542 1           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCC
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNI  227 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (327)
                                ......|+.+|...+.+.+.+. ..|++++++.||.+.+++.... ....    ..+...+        .
T Consensus       382 ----------~~g~~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm~~~-~~~~----~~l~~~g--------~  437 (496)
T 3mje_A          382 ----------SGGQPGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGMATD-PEVH----DRLVRQG--------V  437 (496)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC-------C----HHHHHTT--------E
T ss_pred             ----------CCCcHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCccccC-hHHH----HHHHhcC--------C
Confidence                      1234579999999999888765 4699999999998877653321 1101    1111111        1


Q ss_pred             CeeeHHHHHHHHHHhhcCCC
Q 020334          228 SMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       228 ~~i~v~D~a~~~~~~~~~~~  247 (327)
                      ..+..++.++++..++..+.
T Consensus       438 ~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          438 LAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             EEECHHHHHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHHHHHcCCC
Confidence            35788999999999998754

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.75  E-value=2e-17  Score=143.30  Aligned_cols=223  Identities=15%  Similarity=0.059  Sum_probs=137.7

Q ss_pred             CCeEEEeCC--cchhHHHHHHHHHHCCCeEEEEEcCCCC--------CcchhhhhhCCCCCC--CCeEEEeCCC------
Q 020334            5 KGKVCVTGG--TGFIGSWLIMRLLDHGYFVTTTVRSDPE--------HKKDLSFLTNLPGAS--ERLQIFNADL------   66 (327)
Q Consensus         5 ~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~~~~~~~~~~~--~~~~~~~~D~------   66 (327)
                      +|++|||||  +|+||.+++++|+++|++|++++| ++.        ....+..+.......  ..+.++.+|+      
T Consensus         9 gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~   87 (315)
T 2o2s_A            9 GQTAFVAGVADSHGYGWAIAKHLASAGARVALGTW-PPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPE   87 (315)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEEC-HHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTT
T ss_pred             CCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEec-ccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccc
Confidence            578999999  899999999999999999999987 210        001111111110000  0124444443      


Q ss_pred             ------CC--------hhHHHHHh-------cCCCEEEEccCCCC--------CCCCchHHHHHHHHHhHHHHHHHHHHh
Q 020334           67 ------ND--------PESFDAAI-------AGCAGVIHVAAPID--------IDGKETEEVMTQRAVNGTIGILKSCLK  117 (327)
Q Consensus        67 ------~d--------~~~~~~~~-------~~~d~vih~a~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~  117 (327)
                            +|        ++++.+++       .++|++|||||...        .+.+++. ..+++|+.++..+++++.+
T Consensus        88 ~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~  166 (315)
T 2o2s_A           88 DVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYL-AASSNSAYSFVSLLQHFGP  166 (315)
T ss_dssp             SSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHST
T ss_pred             hhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHH-HHHhhhhHHHHHHHHHHHH
Confidence                  21        33444433       36899999998542        1122333 7899999999999999876


Q ss_pred             cC-CccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc-hhhHhhhHHHHHHHHHHHHH----cCCcEEEEec
Q 020334          118 SG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG-KSYVLTKTLTERAALEFAEE----HGLDLVTLIP  191 (327)
Q Consensus       118 ~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~-~~Y~~sK~~~e~~~~~~~~~----~~~~~~i~R~  191 (327)
                      .- ...+||++||...+...                      +.. ..|+.+|...+.+.+.++.+    .|++++.++|
T Consensus       167 ~m~~~g~Iv~isS~~~~~~~----------------------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~P  224 (315)
T 2o2s_A          167 IMNEGGSAVTLSYLAAERVV----------------------PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISA  224 (315)
T ss_dssp             TEEEEEEEEEEEEGGGTSCC----------------------TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             HHhcCCEEEEEecccccccC----------------------CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEec
Confidence            41 12699999997654210                      112 36999999999998887755    4899999999


Q ss_pred             CceecCCCCCC----CCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          192 SFVVGPFICPK----FAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       192 ~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      |.|..+.....    .............. ..+..     .+..++|+|+++++++....  ..| .+.+.|.
T Consensus       225 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~-----r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  291 (315)
T 2o2s_A          225 GPLKSRAASAIGKSGEKSFIDYAIDYSYN-NAPLR-----RDLHSDDVGGAALFLLSPLARAVSGVTLYVDNG  291 (315)
T ss_dssp             CCCCCHHHHHTTCSSSSCHHHHHHHHHHH-HSSSC-----CCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ccccchhhhhccccccchhHHHHHHHHhc-cCCCC-----CCCCHHHHHHHHHHHhCchhccCcCCEEEECCC
Confidence            99877631100    01111111111110 01111     46789999999999987532  234 4456554

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.75  E-value=2.1e-17  Score=143.53  Aligned_cols=224  Identities=13%  Similarity=-0.010  Sum_probs=120.6

Q ss_pred             CCeEEEeCC--cchhHHHHHHHHHHCCCeEEEEEcCC----------CCCcchh------------hhhhCCCCCCCCeE
Q 020334            5 KGKVCVTGG--TGFIGSWLIMRLLDHGYFVTTTVRSD----------PEHKKDL------------SFLTNLPGASERLQ   60 (327)
Q Consensus         5 ~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~----------~~~~~~~------------~~~~~~~~~~~~~~   60 (327)
                      +|++|||||  +|+||.++++.|+++|++|++++|+.          .......            ..+...........
T Consensus         9 ~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (319)
T 2ptg_A            9 GKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDK   88 (319)
T ss_dssp             TCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSE
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccccc
Confidence            478999999  89999999999999999999998621          1110100            00000000000134


Q ss_pred             EEeCCC--CC------------------hhHHHHHh-------cCCCEEEEccCCCC--------CCCCchHHHHHHHHH
Q 020334           61 IFNADL--ND------------------PESFDAAI-------AGCAGVIHVAAPID--------IDGKETEEVMTQRAV  105 (327)
Q Consensus        61 ~~~~D~--~d------------------~~~~~~~~-------~~~d~vih~a~~~~--------~~~~~~~~~~~~~nv  105 (327)
                      ++.+|+  .+                  .+++.+++       .++|++|||||...        ...+.+. ..+++|+
T Consensus        89 ~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~-~~~~vN~  167 (319)
T 2ptg_A           89 IYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYL-AAVSSSS  167 (319)
T ss_dssp             EEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHH-HHHHHHT
T ss_pred             cccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHH-HHHhHhh
Confidence            444442  22                  22344333       36899999998531        1222333 7899999


Q ss_pred             hHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc-hhhHhhhHHHHHHHHHHHHH--
Q 020334          106 NGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG-KSYVLTKTLTERAALEFAEE--  181 (327)
Q Consensus       106 ~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~-~~Y~~sK~~~e~~~~~~~~~--  181 (327)
                      .++..+++++.+.- ...+||++||...+...                      +.. ..|+.+|...+.+.+.++.+  
T Consensus       168 ~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~----------------------~~~~~~Y~asKaal~~l~~~la~el~  225 (319)
T 2ptg_A          168 YSFVSLLQHFLPLMKEGGSALALSYIASEKVI----------------------PGYGGGMSSAKAALESDCRTLAFEAG  225 (319)
T ss_dssp             HHHHHHHHHHGGGEEEEEEEEEEEECC----------------------------------------THHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCceEEEEecccccccc----------------------CccchhhHHHHHHHHHHHHHHHHHhc
Confidence            99999999988651 12699999997654210                      112 36999999999888887755  


Q ss_pred             --cCCcEEEEecCceecCCCCCCCC----chHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eE
Q 020334          182 --HGLDLVTLIPSFVVGPFICPKFA----GSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKG-RY  252 (327)
Q Consensus       182 --~~~~~~i~R~~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y  252 (327)
                        .|++++.++||.+..+.......    ........... ...+.     ..+..++|+|+++++++....  ..| .+
T Consensus       226 ~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~~p~-----~r~~~peevA~~v~~L~s~~~~~itG~~i  299 (319)
T 2ptg_A          226 RARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSE-ANAPL-----QKELESDDVGRAALFLLSPLARAVTGATL  299 (319)
T ss_dssp             HHHCCEEEEEEECCCC-------------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             cccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHh-ccCCC-----CCCCCHHHHHHHHHHHhCcccCCccCCEE
Confidence              48999999999998874221100    00000000000 00111     146789999999999997532  234 44


Q ss_pred             EEecc
Q 020334          253 ICSSA  257 (327)
Q Consensus       253 ~~~~~  257 (327)
                      .+.|.
T Consensus       300 ~vdGG  304 (319)
T 2ptg_A          300 YVDNG  304 (319)
T ss_dssp             EESTT
T ss_pred             EECCC
Confidence            56554

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.74  E-value=1.4e-17  Score=156.40  Aligned_cols=193  Identities=14%  Similarity=0.089  Sum_probs=129.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCC--------CCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHH
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSD--------PEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDA   74 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~   74 (327)
                      .+|++|||||+|+||.+++++|+++|++|++++|..        .... .....+...   ..   .+.+|++|.+++.+
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~---~~---~~~~D~~d~~~~~~   91 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA---GG---EAVADYNSVIDGAK   91 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT---TC---CEEECCCCGGGHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh---CC---eEEEEeCCHHHHHH
Confidence            468899999999999999999999999999998721        1111 112222211   11   23479999888877


Q ss_pred             Hhc-------CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecC
Q 020334           75 AIA-------GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSG  137 (327)
Q Consensus        75 ~~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~  137 (327)
                      +++       ++|++|||||....      +.+++. ..+++|+.++..+++++    ++.+ ..+||++||...+. + 
T Consensus        92 ~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~-~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~~~-~-  167 (613)
T 3oml_A           92 VIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWN-LVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIY-G-  167 (613)
T ss_dssp             HHC----------CEECCCCCCCCCCSTTCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHHHH-C-
T ss_pred             HHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcC-C-
Confidence            765       57999999997542      223344 88999999999998887    4444 57999999976542 1 


Q ss_pred             CCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHH
Q 020334          138 KDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV  214 (327)
Q Consensus       138 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~  214 (327)
                                          ......|+.+|...+.+.+.++.++   |++++.+.|+.+ .+......+.    .    
T Consensus       168 --------------------~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~----~----  218 (613)
T 3oml_A          168 --------------------NFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPD----I----  218 (613)
T ss_dssp             --------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCH----H----
T ss_pred             --------------------CCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccch----h----
Confidence                                1234579999999999999988765   899999999853 2211110010    0    


Q ss_pred             hCCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          215 LGNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       215 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                            .     ...+.++|+|.++++++...
T Consensus       219 ------~-----~~~~~pedvA~~v~~L~s~~  239 (613)
T 3oml_A          219 ------L-----FNELKPKLIAPVVAYLCHES  239 (613)
T ss_dssp             ------H-----HTTCCGGGTHHHHHHTTSTT
T ss_pred             ------h-----hhcCCHHHHHHHHHHhcCCC
Confidence                  0     13457889999999998764

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.74  E-value=3.1e-17  Score=150.96  Aligned_cols=222  Identities=16%  Similarity=0.127  Sum_probs=149.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCe-EEEE-EcCCCC-------------CcchhhhhhCCCCCCCCeEEEeCCCCCh
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYF-VTTT-VRSDPE-------------HKKDLSFLTNLPGASERLQIFNADLNDP   69 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~-~r~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~D~~d~   69 (327)
                      .+++|||||+|.||.+++++|+++|++ |+.+ +|+.+.             .......+...   ..++.++.+|++|.
T Consensus       251 ~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          251 DGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL---GATATVVTCDLTDA  327 (525)
T ss_dssp             TSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH---TCEEEEEECCTTSH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc---CCEEEEEECCCCCH
Confidence            578999999999999999999999998 5555 674221             11112222221   35789999999999


Q ss_pred             hHHHHHhcC------CCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhcCC----ccEEEEeccceeee
Q 020334           70 ESFDAAIAG------CAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKSGT----VKRFVYTSSGSTVY  134 (327)
Q Consensus        70 ~~~~~~~~~------~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~~----~~~~v~~SS~~v~~  134 (327)
                      +++.++++.      +|+|||+||.....     ..+.....+++|+.++.++.+++.....    ..+||++||...+.
T Consensus       328 ~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~  407 (525)
T 3qp9_A          328 EAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW  407 (525)
T ss_dssp             HHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred             HHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence            999988863      69999999975421     1122347899999999999999886531    46899999987652


Q ss_pred             ecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHH
Q 020334          135 FSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV  214 (327)
Q Consensus       135 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~  214 (327)
                      .                      ......|+.+|...+.+...+. ..|++++++.||.+-++. ..  .......   .
T Consensus       408 g----------------------~~g~~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~~tgm-~~--~~~~~~~---~  458 (525)
T 3qp9_A          408 G----------------------GAGQGAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPWEGSR-VT--EGATGER---L  458 (525)
T ss_dssp             C----------------------CTTCHHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCBTTSG-GG--SSHHHHH---H
T ss_pred             C----------------------CCCCHHHHHHHHHHHHHHHHHH-hCCCCEEEEECCcccccc-cc--chhhHHH---H
Confidence            1                      1235679999999988876553 358999999999882221 10  1111111   1


Q ss_pred             hCCccccccccCCCeeeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHH
Q 020334          215 LGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSA  270 (327)
Q Consensus       215 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~  270 (327)
                      ...+        ...+..+++++++..++..+..  ...+  ..+.+..+...+..
T Consensus       459 ~~~g--------~~~l~pee~a~~l~~~l~~~~~--~v~v--~~~dw~~~~~~~~~  502 (525)
T 3qp9_A          459 RRLG--------LRPLAPATALTALDTALGHGDT--AVTI--ADVDWSSFAPGFTT  502 (525)
T ss_dssp             HHTT--------BCCBCHHHHHHHHHHHHHHTCS--EEEE--CCBCHHHHHHHHHS
T ss_pred             HhcC--------CCCCCHHHHHHHHHHHHhCCCC--eEEE--EeCCHHHHHhhccc
Confidence            1111        1467899999999999987532  1112  23456666655544

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.71  E-value=1.5e-16  Score=138.67  Aligned_cols=171  Identities=9%  Similarity=-0.059  Sum_probs=119.0

Q ss_pred             CCeEEEeCCcc--hhHHHHHHHHHHCCCeEEEEEcCC--------CCCcchhhhhhCC-CCCCCCeEEEeCCCCCh--h-
Q 020334            5 KGKVCVTGGTG--FIGSWLIMRLLDHGYFVTTTVRSD--------PEHKKDLSFLTNL-PGASERLQIFNADLNDP--E-   70 (327)
Q Consensus         5 ~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~--~-   70 (327)
                      +|++|||||++  .||.+++++|+++|++|++.+|+.        ............. ......+.++.+|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            57899999875  999999999999999999877621        0011111111111 11123467888999877  5 


Q ss_pred             -----------------HHHHHhc-------CCCEEEEccCCCC--------CCCCchHHHHHHHHHhHHHHHHHHHHhc
Q 020334           71 -----------------SFDAAIA-------GCAGVIHVAAPID--------IDGKETEEVMTQRAVNGTIGILKSCLKS  118 (327)
Q Consensus        71 -----------------~~~~~~~-------~~d~vih~a~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~  118 (327)
                                       ++.++++       ++|++||+||...        .+.+.+. ..+++|+.++..+.+++...
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYL-DALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHH
Confidence                             5555443       6899999998531        1222343 88999999999999988764


Q ss_pred             C-CccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch-hhHhhhHHHHHHHHHHHHH----cCCcEEEEecC
Q 020334          119 G-TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK-SYVLTKTLTERAALEFAEE----HGLDLVTLIPS  192 (327)
Q Consensus       119 ~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~-~Y~~sK~~~e~~~~~~~~~----~~~~~~i~R~~  192 (327)
                      - ...++|++||...+..                      .+... .|+.||...+.+.+.++.+    .|++++.+.||
T Consensus       161 m~~~g~Iv~isS~~~~~~----------------------~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG  218 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQKV----------------------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAG  218 (329)
T ss_dssp             EEEEEEEEEEECGGGTSC----------------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HhhCCeEEEEeCccccCC----------------------CCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecc
Confidence            2 1258999999765421                      01122 6999999998888877654    48999999999


Q ss_pred             ceecCC
Q 020334          193 FVVGPF  198 (327)
Q Consensus       193 ~v~G~~  198 (327)
                      .|..+.
T Consensus       219 ~v~T~~  224 (329)
T 3lt0_A          219 PLKSRA  224 (329)
T ss_dssp             CCCCHH
T ss_pred             eeechh
Confidence            998763

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.64  E-value=2.7e-15  Score=151.84  Aligned_cols=207  Identities=14%  Similarity=0.085  Sum_probs=139.7

Q ss_pred             CCCCeEEEeCCcch-hHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhh-CCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            3 EQKGKVCVTGGTGF-IGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLT-NLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      ..++++|||||+|. ||.++++.|++.|++|+++++++...... ...+. .......++.++.+|++|.+++.++++  
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i  752 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  752 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence            34678999999999 99999999999999999985424432221 12221 111112468899999999998877653  


Q ss_pred             -----------CCCEEEEccCCCCCC---------CCchHHHHHHHHHhHHHHHHHHHHhcC-----CccEEEEecccee
Q 020334           78 -----------GCAGVIHVAAPIDID---------GKETEEVMTQRAVNGTIGILKSCLKSG-----TVKRFVYTSSGST  132 (327)
Q Consensus        78 -----------~~d~vih~a~~~~~~---------~~~~~~~~~~~nv~~~~~l~~~~~~~~-----~~~~~v~~SS~~v  132 (327)
                                 ++|++|||||.....         .+.+ ...+++|+.++..+++.++...     ...+||++||...
T Consensus       753 ~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~-~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag  831 (1887)
T 2uv8_A          753 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFA-HRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG  831 (1887)
T ss_dssp             HSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHH-HHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTT
T ss_pred             HHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHH-HHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHh
Confidence                       489999999975432         1223 4789999999999999874322     1369999999754


Q ss_pred             eeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHH-HHHHHHHcC--CcEEEEecCceecCCCCCCCCchHHH
Q 020334          133 VYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERA-ALEFAEEHG--LDLVTLIPSFVVGPFICPKFAGSVRS  209 (327)
Q Consensus       133 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~-~~~~~~~~~--~~~~i~R~~~v~G~~~~~~~~~~~~~  209 (327)
                      +.                        .....|+.+|...+.+ .+.++++++  ++++.+.||.+.|...... ......
T Consensus       832 ~~------------------------gg~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~-~~~~~~  886 (1887)
T 2uv8_A          832 TF------------------------GGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA-NNIIAE  886 (1887)
T ss_dssp             CS------------------------SCBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC------CCTTHH
T ss_pred             cc------------------------CCCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccccccccc-chhHHH
Confidence            42                        0134699999999998 666665443  9999999999985321110 111111


Q ss_pred             HHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          210 TLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      ..   ...+.        .+..++|+|+++++++...
T Consensus       887 ~~---~~~pl--------r~~sPEEVA~avlfLaSd~  912 (1887)
T 2uv8_A          887 GI---EKMGV--------RTFSQKEMAFNLLGLLTPE  912 (1887)
T ss_dssp             HH---HTTSC--------CCEEHHHHHHHHHGGGSHH
T ss_pred             HH---HhcCC--------CCCCHHHHHHHHHHHhCCC
Confidence            11   11111        3558999999999998764

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.63  E-value=4e-16  Score=153.23  Aligned_cols=207  Identities=14%  Similarity=0.089  Sum_probs=137.0

Q ss_pred             CCCCeEEEeCCcch-hHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCC-CCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            3 EQKGKVCVTGGTGF-IGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNL-PGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      ..++++|||||+|. ||.++++.|++.|++|+++++++..... ....+... .....++.++.+|++|.+++.++++  
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I  553 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  553 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence            34578999999998 9999999999999999998543443322 22223111 1113468889999999998877653  


Q ss_pred             -----------CCCEEEEccCCCCCC---------CCchHHHHHHHHHhHHHHHHHHHHhcC-----CccEEEEecccee
Q 020334           78 -----------GCAGVIHVAAPIDID---------GKETEEVMTQRAVNGTIGILKSCLKSG-----TVKRFVYTSSGST  132 (327)
Q Consensus        78 -----------~~d~vih~a~~~~~~---------~~~~~~~~~~~nv~~~~~l~~~~~~~~-----~~~~~v~~SS~~v  132 (327)
                                 .+|++||+||.....         .+.+ ...+++|+.++..++++++...     +..+||++||...
T Consensus       554 ~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~-~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG  632 (1688)
T 2pff_A          554 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFA-HRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG  632 (1688)
T ss_dssp             HSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHH-HHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTT
T ss_pred             HHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHH-HHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHh
Confidence                       489999999965322         1223 4788999999999988873221     1368999999654


Q ss_pred             eeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHH-HHHHHHHcC--CcEEEEecCceecCCCCCCCCchHHH
Q 020334          133 VYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERA-ALEFAEEHG--LDLVTLIPSFVVGPFICPKFAGSVRS  209 (327)
Q Consensus       133 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~-~~~~~~~~~--~~~~i~R~~~v~G~~~~~~~~~~~~~  209 (327)
                      ..                        .....|+.||...+.+ .+.++++++  ++++.+.||.+.|...... ......
T Consensus       633 ~~------------------------Gg~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~-~e~~~~  687 (1688)
T 2pff_A          633 TF------------------------GGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA-NNIIAE  687 (1688)
T ss_dssp             TS------------------------SCBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCT-TTTCST
T ss_pred             cc------------------------CCchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCC-chHHHH
Confidence            31                        0134699999999998 444444332  8888999999885321110 000000


Q ss_pred             HHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          210 TLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      .    . ....      ..+..++|+|+++++++...
T Consensus       688 ~----l-~~ip------lR~~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          688 G----I-EKMG------VRTFSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             T----T-SSSS------CCCCCCCTTHHHHHHHTSTT
T ss_pred             H----H-HhCC------CCCCCHHHHHHHHHHHhCCC
Confidence            0    0 0000      12447899999999999765

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.61  E-value=6.6e-15  Score=148.77  Aligned_cols=208  Identities=13%  Similarity=0.046  Sum_probs=138.4

Q ss_pred             CCCCCeEEEeCCcch-hHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhh-hCCCCCCCCeEEEeCCCCChhHHHHHhc-
Q 020334            2 EEQKGKVCVTGGTGF-IGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFL-TNLPGASERLQIFNADLNDPESFDAAIA-   77 (327)
Q Consensus         2 ~~~~~~ilVtGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~-   77 (327)
                      ...++++|||||+|. ||.++++.|++.|++|+++++++..... ....+ ........++.++.+|++|.+++.++++ 
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~  728 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY  728 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence            334688999999999 9999999999999999998753443221 11122 1111112468899999999998887663 


Q ss_pred             ----------CCCEEEEccCCCCCC----CC----chHHHHHHHHHhHHHHHHHHHHhcC-----CccEEEEeccceeee
Q 020334           78 ----------GCAGVIHVAAPIDID----GK----ETEEVMTQRAVNGTIGILKSCLKSG-----TVKRFVYTSSGSTVY  134 (327)
Q Consensus        78 ----------~~d~vih~a~~~~~~----~~----~~~~~~~~~nv~~~~~l~~~~~~~~-----~~~~~v~~SS~~v~~  134 (327)
                                .+|+||||||.....    ..    +.....+++|+.++..+++.++...     +..+||++||...+.
T Consensus       729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~  808 (1878)
T 2uv9_A          729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF  808 (1878)
T ss_dssp             HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred             HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence                      489999999965322    11    1224789999999998887643211     136999999976442


Q ss_pred             ecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH-c--CCcEEEEecCcee-cCCCCCCCCchHHHH
Q 020334          135 FSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE-H--GLDLVTLIPSFVV-GPFICPKFAGSVRST  210 (327)
Q Consensus       135 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~--~~~~~i~R~~~v~-G~~~~~~~~~~~~~~  210 (327)
                      .                        ....|+.+|...+.+++.+..+ +  +++++.+.||.+- ++...    . ....
T Consensus       809 g------------------------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~----~-~~~~  859 (1878)
T 2uv9_A          809 G------------------------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMS----A-NNLV  859 (1878)
T ss_dssp             S------------------------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCS----H-HHHT
T ss_pred             C------------------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccc----c-chhh
Confidence            0                        1235999999999987765443 2  3999999999887 44211    1 0000


Q ss_pred             HHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          211 LAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      .......+.        .+..++|+|+++++++...
T Consensus       860 ~~~~~~~pl--------r~~sPeEVA~avlfLaSd~  887 (1878)
T 2uv9_A          860 AEGVEKLGV--------RTFSQQEMAFNLLGLMAPA  887 (1878)
T ss_dssp             HHHHHTTTC--------CCBCHHHHHHHHHHHHSHH
T ss_pred             HHHHHhcCC--------CCCCHHHHHHHHHHHhCCc
Confidence            111111111        2458999999999998654

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.60  E-value=2.3e-14  Score=124.97  Aligned_cols=207  Identities=14%  Similarity=0.013  Sum_probs=134.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHH-CCCeEEEEEcCCCCCcch-----------hh-hhhCCCCCCCCeEEEeCCCCChhH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLD-HGYFVTTTVRSDPEHKKD-----------LS-FLTNLPGASERLQIFNADLNDPES   71 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~-----------~~-~~~~~~~~~~~~~~~~~D~~d~~~   71 (327)
                      +|++|||||++.||.++++.|++ .|++|++++|+.......           .. .+...   ...+..+.+|++|+++
T Consensus        47 gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~---G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           47 PKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK---GLYAKSINGDAFSDEI  123 (405)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT---TCCEEEEESCTTSHHH
T ss_pred             CCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc---CCceEEEECCCCCHHH
Confidence            67899999999999999999999 999999999843322111           11 11111   2467889999999988


Q ss_pred             HHHHhc-------CCCEEEEccCCC-------------C---------------------------CCCCchHHHHHHHH
Q 020334           72 FDAAIA-------GCAGVIHVAAPI-------------D---------------------------IDGKETEEVMTQRA  104 (327)
Q Consensus        72 ~~~~~~-------~~d~vih~a~~~-------------~---------------------------~~~~~~~~~~~~~n  104 (327)
                      +.++++       ++|++||+||..             .                           .+.+++. ..+++|
T Consensus       124 v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~-~~v~Vn  202 (405)
T 3zu3_A          124 KQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEID-STVAVM  202 (405)
T ss_dssp             HHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHH-HHHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHH-HHHHhh
Confidence            877664       589999999863             0                           1222344 667888


Q ss_pred             HhHHH-HHHHHHHhcC---CccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHH
Q 020334          105 VNGTI-GILKSCLKSG---TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE  180 (327)
Q Consensus       105 v~~~~-~l~~~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  180 (327)
                      ..+.. .++.++....   +..++|++||.......     +               ......|+.+|...+.+.+.++.
T Consensus       203 ~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~-----p---------------~~~~~aY~AaKaal~~ltrsLA~  262 (405)
T 3zu3_A          203 GGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITH-----D---------------IYWNGSIGAAKKDLDQKVLAIRE  262 (405)
T ss_dssp             SSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGT-----T---------------TTTTSHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcC-----C---------------CccchHHHHHHHHHHHHHHHHHH
Confidence            87765 5555543221   13589999996543100     0               01125799999999999988887


Q ss_pred             Hc----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcC
Q 020334          181 EH----GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       181 ~~----~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                      ++    |+++..+-|+.+-.+.... .+. .......+..   ++.     .+-..+|+++++.+++..
T Consensus       263 Ela~~~GIRVNaVaPG~i~T~~s~~-ip~-~p~y~~~l~~---~mk-----r~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          263 SLAAHGGGDARVSVLKAVVSQASSA-IPM-MPLYLSLLFK---VMK-----EKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             HHHTTTSCEEEEEECCCCCCHHHHT-STT-HHHHHHHHHH---HHH-----HHTCCCCHHHHHHHHHHH
T ss_pred             HhCcccCeEEEEEEeCCCcCchhhc-CCC-CcHHHHHHHH---HHh-----cCCCcHHHHHHHHHHHhc
Confidence            63    7999999999988774321 111 1111110000   011     233345899999998865

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.59  E-value=3.4e-14  Score=125.11  Aligned_cols=209  Identities=14%  Similarity=-0.018  Sum_probs=134.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHH-CCCeEEEEEcCCCCCcch-----------h-hhhhCCCCCCCCeEEEeCCCCChh
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLD-HGYFVTTTVRSDPEHKKD-----------L-SFLTNLPGASERLQIFNADLNDPE   70 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~D~~d~~   70 (327)
                      .+|++|||||++.||.++++.|++ .|++|++++|+.......           + ..+...   ...+..+.+|++|++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~---G~~a~~i~~Dvtd~~  136 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA---GLYSKSINGDAFSDA  136 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT---TCCEEEEESCTTSHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc---CCcEEEEEecCCCHH
Confidence            468899999999999999999999 999999999944322211           1 122211   246788999999998


Q ss_pred             HHHHHh--------cCCCEEEEccCCC-------------C---C------------------------CCCchHHHHHH
Q 020334           71 SFDAAI--------AGCAGVIHVAAPI-------------D---I------------------------DGKETEEVMTQ  102 (327)
Q Consensus        71 ~~~~~~--------~~~d~vih~a~~~-------------~---~------------------------~~~~~~~~~~~  102 (327)
                      ++++++        .++|++||+||..             .   .                        +.+++. ..++
T Consensus       137 ~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~-~~v~  215 (422)
T 3s8m_A          137 ARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIE-DTIT  215 (422)
T ss_dssp             HHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHH-HHHH
T ss_pred             HHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHH-HHHH
Confidence            776654        3579999999862             0   1                        112333 5566


Q ss_pred             HHHhHHH-HHHHHHHhcC---CccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHH
Q 020334          103 RAVNGTI-GILKSCLKSG---TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEF  178 (327)
Q Consensus       103 ~nv~~~~-~l~~~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  178 (327)
                      +|..+.. .++.++....   +..++|++||.......                   + ......|+.||...+.+.+.+
T Consensus       216 Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~-------------------p-~~~~~aY~ASKaAl~~lTrsL  275 (422)
T 3s8m_A          216 VMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITW-------------------P-IYWHGALGKAKVDLDRTAQRL  275 (422)
T ss_dssp             HHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGH-------------------H-HHTSHHHHHHHHHHHHHHHHH
T ss_pred             hhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccC-------------------C-CccchHHHHHHHHHHHHHHHH
Confidence            6666554 5555554321   13589999997543100                   0 011257999999999999988


Q ss_pred             HHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          179 AEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       179 ~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      +.++   |+++..+.||.+-.+.... .+. ......... .  ++.     ...-.+|+++++.+++...
T Consensus       276 A~Ela~~GIRVNaVaPG~i~T~~~~~-ip~-~~~~~~~~~-~--~m~-----r~G~pEdva~~v~~L~sd~  336 (422)
T 3s8m_A          276 NARLAKHGGGANVAVLKSVVTQASAA-IPV-MPLYISMVY-K--IMK-----EKGLHEGTIEQLDRLFRER  336 (422)
T ss_dssp             HHHHHTTTCEEEEEEECCCCCTTGGG-STH-HHHHHHHHH-H--HHH-----HTTCCCCHHHHHHHHHHHT
T ss_pred             HHHhCccCEEEEEEEcCCCcChhhhc-CCC-ChHHHHHHH-h--hhc-----CCcChHHHHHHHHHHhcch
Confidence            8765   8999999999998875332 111 111111000 0  111     1223468999999988653

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.57  E-value=9.6e-15  Score=140.62  Aligned_cols=202  Identities=19%  Similarity=0.197  Sum_probs=142.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHH-HCCC-eEEEEEcCCCCC---cchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLL-DHGY-FVTTTVRSDPEH---KKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~-~~g~-~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-   77 (327)
                      +.+++|||||+|.||.++++.|+ ++|+ +|+.++|+.+..   ......+...   ..++.++.+|++|.++++++++ 
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~---G~~v~~~~~Dvsd~~~v~~~~~~  605 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY---GAEVSLQACDVADRETLAKVLAS  605 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHHT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc---CCcEEEEEeecCCHHHHHHHHHH
Confidence            36789999999999999999999 7898 588899942221   1222233222   3578999999999999998875 


Q ss_pred             -----CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -----GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -----~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                           .+|+|||+||....      +.+++. ..++.|+.++.++.+++.. . . +||++||...+. +          
T Consensus       606 ~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~-~~~~~nv~G~~~l~~~~~~-~-l-~iV~~SS~ag~~-g----------  670 (795)
T 3slk_A          606 IPDEHPLTAVVHAAGVLDDGVSESLTVERLD-QVLRPKVDGARNLLELIDP-D-V-ALVLFSSVSGVL-G----------  670 (795)
T ss_dssp             SCTTSCEEEEEECCCCCCCCCGGGCCHHHHH-HHHCCCCCHHHHHHHHSCT-T-S-EEEEEEETHHHH-T----------
T ss_pred             HHHhCCCEEEEECCCcCCCCchhhCCHHHHH-HHHHHHHHHHHHHHHHHhh-C-C-EEEEEccHHhcC-C----------
Confidence                 36999999987542      223344 7889999999999999843 2 3 899999987542 1          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHH-HHHHHhCCcccccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRS-TLAMVLGNREEYSILL  225 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  225 (327)
                                 .+....|+.+|...+.+.+.+.. .|++++.+-||.+-+++..    ..+.. ....+...+       
T Consensus       671 -----------~~g~~~YaAaka~~~alA~~~~~-~Gi~v~sI~pG~v~t~g~~----~~~~~~~~~~~~~~g-------  727 (795)
T 3slk_A          671 -----------SGGQGNYAAANSFLDALAQQRQS-RGLPTRSLAWGPWAEHGMA----STLREAEQDRLARSG-------  727 (795)
T ss_dssp             -----------CSSCHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCCSCCCHH----HHHHHHHHHHHHHTT-------
T ss_pred             -----------CCCCHHHHHHHHHHHHHHHHHHH-cCCeEEEEECCeECcchhh----ccccHHHHHHHHhcC-------
Confidence                       13356799999988888877654 6999999999987655311    11110 111111111       


Q ss_pred             CCCeeeHHHHHHHHHHhhcCCC
Q 020334          226 NISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                       ...+..++....+..++..+.
T Consensus       728 -~~~l~~~e~~~~~~~~l~~~~  748 (795)
T 3slk_A          728 -LLPISTEEGLSQFDAACGGAH  748 (795)
T ss_dssp             -BCCCCHHHHHHHHHHHHTSSC
T ss_pred             -CCCCCHHHHHHHHHHHHhCCC
Confidence             145778899999998887754

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.55  E-value=4.6e-14  Score=132.01  Aligned_cols=204  Identities=15%  Similarity=0.129  Sum_probs=135.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCC-CChhHHH-HH---hcC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL-NDPESFD-AA---IAG   78 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~d~~~~~-~~---~~~   78 (327)
                      .+|.++||||++.||.++++.|+++|++|++.+|+..  ......+...   ..++..+.+|+ .+.+.+. .+   +.+
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~--~~~~~~i~~~---g~~~~~~~~Dv~~~~~~~~~~~~~~~G~  395 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDA--TKTVDEIKAA---GGEAWPDQHDVAKDSEAIIKNVIDKYGT  395 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHHT---TCEEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccH--HHHHHHHHhc---CCeEEEEEcChHHHHHHHHHHHHHhcCC
Confidence            3578999999999999999999999999999886221  2222233221   23566778888 6554432 22   347


Q ss_pred             CCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           79 CAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        79 ~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      +|++|||||....      +.+++. ..+++|+.++..+.+++..    .+ ..++|++||..... +            
T Consensus       396 iDiLVnNAGi~~~~~~~~~~~~~~~-~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~-~------------  460 (604)
T 2et6_A          396 IDILVNNAGILRDRSFAKMSKQEWD-SVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIY-G------------  460 (604)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHS-C------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcc-C------------
Confidence            9999999996431      223444 8899999998888776543    33 46999999976432 1            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL  225 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (327)
                               .+....|+.||.....+.+.++.++   |+++..+.|+. -.+..    ....    .    ..  .    
T Consensus       461 ---------~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~----~~~~----~----~~--~----  512 (604)
T 2et6_A          461 ---------NFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMT----LSIM----R----EQ--D----  512 (604)
T ss_dssp             ---------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC---------------------------
T ss_pred             ---------CCCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccc----cccC----c----hh--h----
Confidence                     1224579999999999988888764   89999999983 22210    0000    0    00  0    


Q ss_pred             CCCeeeHHHHHHHHHHhhcCCC-CCc-eEEEec
Q 020334          226 NISMVHIDDVARAHIFLLEYPD-AKG-RYICSS  256 (327)
Q Consensus       226 ~~~~i~v~D~a~~~~~~~~~~~-~~~-~y~~~~  256 (327)
                       .....++|+|.++++++.... ..| ++.+.+
T Consensus       513 -~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdG  544 (604)
T 2et6_A          513 -KNLYHADQVAPLLVYLGTDDVPVTGETFEIGG  544 (604)
T ss_dssp             -CCSSCGGGTHHHHHHTTSTTCCCCSCEEEEET
T ss_pred             -ccCCCHHHHHHHHHHHhCCccCCCCcEEEECC
Confidence             134578999999999986533 233 444543

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.53  E-value=1.9e-13  Score=121.31  Aligned_cols=212  Identities=10%  Similarity=-0.094  Sum_probs=134.6

Q ss_pred             CCeEEEeCCcchhHHH--HHHHHHHCCCeEEEEEcCCCCCc-----------chhhhhhCCCCCCCCeEEEeCCCCChhH
Q 020334            5 KGKVCVTGGTGFIGSW--LIMRLLDHGYFVTTTVRSDPEHK-----------KDLSFLTNLPGASERLQIFNADLNDPES   71 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~D~~d~~~   71 (327)
                      +|++|||||++.||.+  +++.|++.|++|++++|+.....           ..+......  ....+..+.+|++|.++
T Consensus        60 gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           60 PKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKK--KGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHH--TTCCEEEEESCTTCHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHH--cCCcEEEEEeeCCCHHH
Confidence            6889999999999999  99999999999999999443221           122222111  12468899999999988


Q ss_pred             HHHHhc-------CCCEEEEccCCC-------------C---C------------------------CCCchHHHHHHHH
Q 020334           72 FDAAIA-------GCAGVIHVAAPI-------------D---I------------------------DGKETEEVMTQRA  104 (327)
Q Consensus        72 ~~~~~~-------~~d~vih~a~~~-------------~---~------------------------~~~~~~~~~~~~n  104 (327)
                      ++++++       ++|++||+||..             .   .                        ..+++. ..+++|
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~-~~~~vn  216 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIE-ETRKVM  216 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHH-HHHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHH-HHHHHh
Confidence            877664       579999999863             0   1                        112222 456666


Q ss_pred             HhHHH-HHHHHHHhcC---CccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHH
Q 020334          105 VNGTI-GILKSCLKSG---TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE  180 (327)
Q Consensus       105 v~~~~-~l~~~~~~~~---~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  180 (327)
                      ..+.. .++.++....   +..++|++||.......     +               ......|+.+|...+.+.+.++.
T Consensus       217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~-----p---------------~~~~~aY~ASKaAL~~ltrsLA~  276 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTY-----K---------------IYREGTIGIAKKDLEDKAKLINE  276 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGT-----T---------------TTTTSHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCC-----C---------------ccccHHHHHHHHHHHHHHHHHHH
Confidence            65544 4555544322   13589999986532100     0               01125799999999888888775


Q ss_pred             H----cCCcEEEEecCceecCCCCCCCCc---hHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCCCCceE
Q 020334          181 E----HGLDLVTLIPSFVVGPFICPKFAG---SVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRY  252 (327)
Q Consensus       181 ~----~~~~~~i~R~~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y  252 (327)
                      +    .|+++.++.||.+-.+.... .+.   ........++.            .--.+|+++++.+++...-.+|.+
T Consensus       277 ELa~~~GIrVN~V~PG~v~T~~s~~-ip~~p~y~~~~~~~mk~------------~G~~E~v~e~~~~L~sd~~~~g~~  342 (418)
T 4eue_A          277 KLNRVIGGRAFVSVNKALVTKASAY-IPTFPLYAAILYKVMKE------------KNIHENCIMQIERMFSEKIYSNEK  342 (418)
T ss_dssp             HHHHHHSCEEEEEECCCCCCHHHHT-STTHHHHHHHHHHHHHH------------TTCCCCHHHHHHHHHHHTTSSSSC
T ss_pred             HhCCccCeEEEEEECCcCcChhhhc-CCCCcHHHHHHHHHHhh------------cCChHHHHHHHHHHhhccccCCCc
Confidence            5    57999999999998764221 111   11111111111            122458999999988764444444

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.51  E-value=1.8e-13  Score=127.95  Aligned_cols=192  Identities=17%  Similarity=0.177  Sum_probs=125.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCC--------CCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDP--------EHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAA   75 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~   75 (327)
                      +|.++||||++.||.++++.|+++|++|++.+|+..        ..... ...+...   ...+.   .|+.|.++++++
T Consensus         8 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~---g~~~~---~d~~d~~~~~~~   81 (604)
T 2et6_A            8 DKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN---GGVAV---ADYNNVLDGDKI   81 (604)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT---TCEEE---EECCCTTCHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc---CCeEE---EEcCCHHHHHHH
Confidence            578999999999999999999999999999887321        11111 1222211   12222   455555333222


Q ss_pred             -------hcCCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCC
Q 020334           76 -------IAGCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGK  138 (327)
Q Consensus        76 -------~~~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~  138 (327)
                             +.++|++|||||...      .+.+++. ..+++|+.++..+.+++.    +.+ ..+||++||..... +  
T Consensus        82 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~-~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~-~--  156 (604)
T 2et6_A           82 VETAVKNFGTVHVIINNAGILRDASMKKMTEKDYK-LVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLY-G--  156 (604)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH-C--
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcC-C--
Confidence                   337999999999643      1223444 889999999888777654    333 46999999976432 1  


Q ss_pred             CCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHh
Q 020334          139 DVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVL  215 (327)
Q Consensus       139 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~  215 (327)
                                         .+....|+.||.....+.+.++.++   |+++..+.|+ +..+.        .    ..  
T Consensus       157 -------------------~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m--------~----~~--  202 (604)
T 2et6_A          157 -------------------NFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRM--------T----ES--  202 (604)
T ss_dssp             -------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHH--------H----HT--
T ss_pred             -------------------CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCcc--------c----cc--
Confidence                               1224579999999999999888764   8999999996 22110        0    00  


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      ......     .....++|++.++++++...
T Consensus       203 ~~~~~~-----~~~~~pe~vA~~v~~L~s~~  228 (604)
T 2et6_A          203 IMPPPM-----LEKLGPEKVAPLVLYLSSAE  228 (604)
T ss_dssp             TSCHHH-----HTTCSHHHHHHHHHHHTSSS
T ss_pred             cCChhh-----hccCCHHHHHHHHHHHhCCc
Confidence            000000     02357899999999998764

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.47  E-value=5.6e-14  Score=121.87  Aligned_cols=177  Identities=14%  Similarity=0.025  Sum_probs=118.5

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCC-------eEEEEEcCC----CCCc-chhhhhhCCCCCCCCeEEEeCCCCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGY-------FVTTTVRSD----PEHK-KDLSFLTNLPGASERLQIFNADLND   68 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~----~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d   68 (327)
                      |+.+++||+||||+||+|++++..|+..|.       +|.++++ +    ..+. .....+.+..   ..+   ..|+..
T Consensus         1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di-~~~~~~~~~~g~~~dl~~~~---~~~---~~~i~~   73 (329)
T 1b8p_A            1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEI-PNEKAQKALQGVMMEIDDCA---FPL---LAGMTA   73 (329)
T ss_dssp             --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC-SCHHHHHHHHHHHHHHHTTT---CTT---EEEEEE
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcC-CCccccccchhhHHHHhhhc---ccc---cCcEEE
Confidence            654567999999999999999999998885       7888887 3    2111 1112222210   011   135544


Q ss_pred             hhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCC
Q 020334           69 PESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        69 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ..++.+.++++|+|||+|+.......... +.+..|+..++++++.+++.+ +..+||++|...-.-     -....+.+
T Consensus        74 ~~~~~~al~~aD~Vi~~ag~~~~~g~~r~-dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~-----t~~~~~~~  147 (329)
T 1b8p_A           74 HADPMTAFKDADVALLVGARPRGPGMERK-DLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTN-----AYIAMKSA  147 (329)
T ss_dssp             ESSHHHHTTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH-----HHHHHHTC
T ss_pred             ecCcHHHhCCCCEEEEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHH-----HHHHHHHc
Confidence            45677889999999999997554444444 889999999999999999984 456999998632100     00000000


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCC
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPF  198 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~  198 (327)
                      +        .-++...++.+++...++...+++..|++...++...|+|..
T Consensus       148 ~--------~~p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~H  190 (329)
T 1b8p_A          148 P--------SLPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNH  190 (329)
T ss_dssp             T--------TSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred             C--------CCCHHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence            0        002234588888888888888888889888888877788864

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.38  E-value=2.5e-12  Score=94.25  Aligned_cols=96  Identities=25%  Similarity=0.279  Sum_probs=75.6

Q ss_pred             CCCCCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            2 EEQKGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      ..|+++|+|+|+ |++|+++++.|.+.| ++|++++| ++.....   +.     ..++.++.+|+.+.+.+.++++++|
T Consensus         2 ~~~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r-~~~~~~~---~~-----~~~~~~~~~d~~~~~~~~~~~~~~d   71 (118)
T 3ic5_A            2 NAMRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADH-DLAALAV---LN-----RMGVATKQVDAKDEAGLAKALGGFD   71 (118)
T ss_dssp             CTTCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEES-CHHHHHH---HH-----TTTCEEEECCTTCHHHHHHHTTTCS
T ss_pred             CCCcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeC-CHHHHHH---HH-----hCCCcEEEecCCCHHHHHHHHcCCC
Confidence            346789999999 999999999999999 99999999 4433222   22     1467889999999999999999999


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEE
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFV  125 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v  125 (327)
                      +|||+++..                 ....+++.+.+.+ ++.+.
T Consensus        72 ~vi~~~~~~-----------------~~~~~~~~~~~~g-~~~~~   98 (118)
T 3ic5_A           72 AVISAAPFF-----------------LTPIIAKAAKAAG-AHYFD   98 (118)
T ss_dssp             EEEECSCGG-----------------GHHHHHHHHHHTT-CEEEC
T ss_pred             EEEECCCch-----------------hhHHHHHHHHHhC-CCEEE
Confidence            999998631                 1357788888887 55444

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.28  E-value=8.3e-12  Score=132.72  Aligned_cols=165  Identities=16%  Similarity=0.129  Sum_probs=117.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCe-EEEEEcCCCCCc---chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYF-VTTTVRSDPEHK---KDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      .+++|||||+|.||.++++.|+++|++ |++++|+.....   .....+...   ..++..+.+|++|.++++++++   
T Consensus      1884 ~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~---g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A         1884 HKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ---GVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT---TCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC---CCEEEEEecCCCCHHHHHHHHHHHH
Confidence            578999999999999999999999997 777888433221   112222221   2467889999999998877664   


Q ss_pred             ---CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 ---GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ---~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                         .+|+|||+||...      .+.+++. ..+++|+.++.++.++++..- ...+||++||..... +           
T Consensus      1961 ~~g~id~lVnnAgv~~~~~~~~~t~e~~~-~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~-g----------- 2027 (2512)
T 2vz8_A         1961 QLGPVGGVFNLAMVLRDAVLENQTPEFFQ-DVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGR-G----------- 2027 (2512)
T ss_dssp             HHSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHT-T-----------
T ss_pred             hcCCCcEEEECCCcCCCCchhhCCHHHHH-HHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcC-C-----------
Confidence               5899999998643      2233444 778999999999988876542 146999999976542 1           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceec
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVG  196 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G  196 (327)
                                .+....|+.+|...+.+.+.... .|++...+-++.+-+
T Consensus      2028 ----------~~g~~~Y~aaKaal~~l~~~rr~-~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2028 ----------NAGQANYGFANSAMERICEKRRH-DGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHH-TTSCCCEEEECCBCT
T ss_pred             ----------CCCcHHHHHHHHHHHHHHHHHHH-CCCcEEEEEccCcCC
Confidence                      12245799999999999986654 589999888876543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.25  E-value=3.1e-10  Score=120.95  Aligned_cols=230  Identities=16%  Similarity=0.079  Sum_probs=140.7

Q ss_pred             CCCeEEEeCCcch-hHHHHHHHHHHCCCeEEEEEcCCCCCc-chhhhhh-CCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            4 QKGKVCVTGGTGF-IGSWLIMRLLDHGYFVTTTVRSDPEHK-KDLSFLT-NLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         4 ~~~~ilVtGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      .+|++|||||++. ||.++++.|++.|++|++.+|+..... ..+..+. .......++..+.+|++|.++++++++   
T Consensus      2135 ~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~ 2214 (3089)
T 3zen_D         2135 XDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVG 2214 (3089)
T ss_dssp             CCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            4688999999999 999999999999999999999432210 1011111 111113457889999999998877642   


Q ss_pred             --------CCCEEEEccCCC----C-------CCCCchH---HHHHHHHHhHHHHHHHHHHhc----CC--ccEEEEecc
Q 020334           78 --------GCAGVIHVAAPI----D-------IDGKETE---EVMTQRAVNGTIGILKSCLKS----GT--VKRFVYTSS  129 (327)
Q Consensus        78 --------~~d~vih~a~~~----~-------~~~~~~~---~~~~~~nv~~~~~l~~~~~~~----~~--~~~~v~~SS  129 (327)
                              ++|++|||||..    .       ...+++.   +..+++|+.++..++..+...    +.  ...++..+|
T Consensus      2215 ~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~s 2294 (3089)
T 3zen_D         2215 TEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGS 2294 (3089)
T ss_dssp             SCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEEC
T ss_pred             hhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECC
Confidence                    479999999961    1       1122222   244888998888887766542    20  112222221


Q ss_pred             ceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH--c--CCcEEEEecCceecCCCCCCCCc
Q 020334          130 GSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE--H--GLDLVTLIPSFVVGPFICPKFAG  205 (327)
Q Consensus       130 ~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~--~~~~~i~R~~~v~G~~~~~~~~~  205 (327)
                      .. .+       .               ......|+.||...+.+.+.++.+  +  +++++.+.||.+-+....... .
T Consensus      2295 s~-~g-------~---------------~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~-~ 2350 (3089)
T 3zen_D         2295 PN-RG-------M---------------FGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQN-D 2350 (3089)
T ss_dssp             SS-TT-------S---------------CSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTT-T
T ss_pred             cc-cc-------c---------------CCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccc-h
Confidence            10 10       0               011236999999999999999988  4  588889999998854322111 1


Q ss_pred             hHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCCC---Cc--eE-EEecc----ccCHHHHHHHH
Q 020334          206 SVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDA---KG--RY-ICSSA----KLTIQEMAEFL  268 (327)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~--~y-~~~~~----~~s~~e~~~~i  268 (327)
                      .....   ....+       . .....+|+|.++++++.....   .+  ++ .++|.    ...+.++...+
T Consensus      2351 ~~~~~---~~~~~-------~-r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~ 2412 (3089)
T 3zen_D         2351 AIVSA---VEEAG-------V-TTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKA 2412 (3089)
T ss_dssp             TTHHH---HGGGS-------C-BCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHH
T ss_pred             hHHHH---HHhcC-------C-CCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHH
Confidence            11111   11111       1 233899999999999875321   11  23 23332    35788777655

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.25  E-value=5.5e-11  Score=102.79  Aligned_cols=117  Identities=15%  Similarity=0.064  Sum_probs=82.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      +++||+||||+||+|++++..|+.+|  ++|.++++ ++. ......+..... ...+.   + +.+..++.++++++|+
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di-~~~-~~~~~dL~~~~~-~~~v~---~-~~~t~d~~~al~gaDv   79 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDV-VNA-PGVTADISHMDT-GAVVR---G-FLGQQQLEAALTGMDL   79 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEES-SSH-HHHHHHHHTSCS-SCEEE---E-EESHHHHHHHHTTCSE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeC-CCc-HhHHHHhhcccc-cceEE---E-EeCCCCHHHHcCCCCE
Confidence            45789999999999999999999988  88999988 433 222222222110 01122   1 2345567788999999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      |||+|+.......... +.+..|+.+++++++.+++.+ .+.+|+++|
T Consensus        80 Vi~~ag~~~~~g~~r~-dl~~~N~~~~~~i~~~i~~~~-p~~~viv~S  125 (326)
T 1smk_A           80 IIVPAGVPRKPGMTRD-DLFKINAGIVKTLCEGIAKCC-PRAIVNLIS  125 (326)
T ss_dssp             EEECCCCCCCSSCCCS-HHHHHHHHHHHHHHHHHHHHC-TTSEEEECC
T ss_pred             EEEcCCcCCCCCCCHH-HHHHHHHHHHHHHHHHHHhhC-CCeEEEEEC
Confidence            9999986543333333 778999999999999999988 566666665

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=99.03  E-value=8.6e-10  Score=94.35  Aligned_cols=170  Identities=12%  Similarity=0.020  Sum_probs=99.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEc--CCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVR--SDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      |||+||||+||+|++++..|+.+|.  ++..+++  +..........+.+.......++....   +    .+.++++|+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~---~----~~a~~~aDv   73 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQG---G----YEDTAGSDV   73 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEEC---C----GGGGTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeC---C----HHHhCCCCE
Confidence            4799999999999999999998875  5666666  211000101111111000123333332   2    234778999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      |||+|+.......... +.+..|+.+++++++++++.+ .+.+|+++|-=+-- .  .........          -++.
T Consensus        74 Vi~~ag~~~~~g~~r~-dl~~~N~~i~~~i~~~i~~~~-p~~~viv~SNPv~~-~--~~~~~~~~~----------~p~~  138 (303)
T 1o6z_A           74 VVITAGIPRQPGQTRI-DLAGDNAPIMEDIQSSLDEHN-DDYISLTTSNPVDL-L--NRHLYEAGD----------RSRE  138 (303)
T ss_dssp             EEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHTTC-SCCEEEECCSSHHH-H--HHHHHHHSS----------SCGG
T ss_pred             EEEcCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHC-CCcEEEEeCChHHH-H--HHHHHHHcC----------CCHH
Confidence            9999996553333434 789999999999999999987 56666666531100 0  000000000          1223


Q ss_pred             hhhHh-hhHHHHHHHHHHHHHcCCcEEEEecCceecCC
Q 020334          162 KSYVL-TKTLTERAALEFAEEHGLDLVTLIPSFVVGPF  198 (327)
Q Consensus       162 ~~Y~~-sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~  198 (327)
                      ...|. +-+..-++....++..+++..-++ ..++|..
T Consensus       139 rviG~gt~Ld~~r~~~~la~~l~v~~~~v~-~~v~G~H  175 (303)
T 1o6z_A          139 QVIGFGGRLDSARFRYVLSEEFDAPVQNVE-GTILGEH  175 (303)
T ss_dssp             GEEECCHHHHHHHHHHHHHHHHTCCGGGEE-CCEEECS
T ss_pred             HeeecccchhHHHHHHHHHHHhCcCHHHeE-EEEEeCC
Confidence            34555 444455555566666777666666 6688854

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.03  E-value=4.9e-10  Score=96.39  Aligned_cols=172  Identities=13%  Similarity=0.083  Sum_probs=102.7

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCC-cch-hhhhhCC-CCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEH-KKD-LSFLTNL-PGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~-~~~-~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      |||+||||+||+|++++..|+.+|.  ++..+++..... ... ...+... +.....+.+...+    +++.+.++++|
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~gaD   76 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDESD   76 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTCS
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCCC
Confidence            4799999999999999999998874  566676611110 110 1111110 0001122322211    12455688999


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      +|||+||.......... +.+..|+.+++++++++++.+  +.+|+++|-=+-- .  .........          -++
T Consensus        77 ~Vi~~Ag~~~~~g~~r~-dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SNPv~~-~--t~~~~k~~~----------~p~  140 (313)
T 1hye_A           77 VVIITSGVPRKEGMSRM-DLAKTNAKIVGKYAKKIAEIC--DTKIFVITNPVDV-M--TYKALVDSK----------FER  140 (313)
T ss_dssp             EEEECCSCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHC--CCEEEECSSSHHH-H--HHHHHHHHC----------CCT
T ss_pred             EEEECCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHHhC--CeEEEEecCcHHH-H--HHHHHHhhC----------cCh
Confidence            99999997554333444 789999999999999999987  4455555421110 0  000000000          133


Q ss_pred             chhhHh-hhHHHHHHHHHHHHHcCCcEEEEecCceecCC
Q 020334          161 GKSYVL-TKTLTERAALEFAEEHGLDLVTLIPSFVVGPF  198 (327)
Q Consensus       161 ~~~Y~~-sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~  198 (327)
                      ...+|. +.+...++...+++..|++..-++. .++|..
T Consensus       141 ~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~-~v~G~H  178 (313)
T 1hye_A          141 NQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRT-RIIGEH  178 (313)
T ss_dssp             TSEEECTTHHHHHHHHHHHHHHHTCCGGGEEC-CEEECS
T ss_pred             hcEEEeCccHHHHHHHHHHHHHhCcCHHHeEE-EEeecc
Confidence            456787 7777778888888877876666665 566644

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.89  E-value=7.3e-09  Score=78.35  Aligned_cols=101  Identities=13%  Similarity=0.034  Sum_probs=71.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi   83 (327)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++++| ++...   ..+..     .....+.+|..+++.+.++ +.++|+||
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~-~~~~~---~~~~~-----~~~~~~~~d~~~~~~l~~~~~~~~d~vi   75 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDI-NEEKV---NAYAS-----YATHAVIANATEENELLSLGIRNFEYVI   75 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEES-CHHHH---HTTTT-----TCSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeC-CHHHH---HHHHH-----hCCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence            568999998 99999999999999999999998 43222   22211     2456788999998888765 67899999


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS  131 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~  131 (327)
                      ++++..           .+.|    ..+.+.+++.+ .++++..++..
T Consensus        76 ~~~~~~-----------~~~~----~~~~~~~~~~~-~~~ii~~~~~~  107 (144)
T 2hmt_A           76 VAIGAN-----------IQAS----TLTTLLLKELD-IPNIWVKAQNY  107 (144)
T ss_dssp             ECCCSC-----------HHHH----HHHHHHHHHTT-CSEEEEECCSH
T ss_pred             ECCCCc-----------hHHH----HHHHHHHHHcC-CCeEEEEeCCH
Confidence            998731           1122    23555666666 56777666543

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.88  E-value=1.4e-09  Score=92.49  Aligned_cols=80  Identities=21%  Similarity=0.182  Sum_probs=62.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      .+++++||||+|++|+++++.|++.|++|++++| +..+...+ ..+...    .++.++.+|++|.+++.++++++|+|
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R-~~~~~~~l~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~Dvl  192 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGR-KLDKAQAAADSVNKR----FKVNVTAAETADDASRAEAVKGAHFV  192 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHHH----HTCCCEEEECCSHHHHHHHTTTCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEEC-CHHHHHHHHHHHHhc----CCcEEEEecCCCHHHHHHHHHhCCEE
Confidence            3578999999999999999999999999999999 43332222 111110    14567789999999999999999999


Q ss_pred             EEccCC
Q 020334           83 IHVAAP   88 (327)
Q Consensus        83 ih~a~~   88 (327)
                      ||+++.
T Consensus       193 Vn~ag~  198 (287)
T 1lu9_A          193 FTAGAI  198 (287)
T ss_dssp             EECCCT
T ss_pred             EECCCc
Confidence            999974

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.81  E-value=2.1e-08  Score=88.32  Aligned_cols=94  Identities=20%  Similarity=0.171  Sum_probs=72.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+|||+|+|| |++|+.+++.|.+ .++|.+.+| +......+   .      ..+..+..|+.|.+++.++++++|+||
T Consensus        15 ~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~-~~~~~~~~---~------~~~~~~~~d~~d~~~l~~~~~~~DvVi   82 (365)
T 3abi_A           15 RHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDV-NNENLEKV---K------EFATPLKVDASNFDKLVEVMKEFELVI   82 (365)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEES-CHHHHHHH---T------TTSEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEc-CHHHHHHH---h------ccCCcEEEecCCHHHHHHHHhCCCEEE
Confidence            4578999998 9999999999865 489999999 43333222   1      356788999999999999999999999


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      +++++.-                 ...++++|.+.+  ++++=+|
T Consensus        83 ~~~p~~~-----------------~~~v~~~~~~~g--~~yvD~s  108 (365)
T 3abi_A           83 GALPGFL-----------------GFKSIKAAIKSK--VDMVDVS  108 (365)
T ss_dssp             ECCCGGG-----------------HHHHHHHHHHHT--CEEEECC
T ss_pred             EecCCcc-----------------cchHHHHHHhcC--cceEeee
Confidence            9987420                 246788888887  6766554

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.80  E-value=3.4e-08  Score=84.74  Aligned_cols=174  Identities=18%  Similarity=0.136  Sum_probs=103.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      |||.|+||+|++|+.++..|+..|  .+|.++++ ++ .......+.+... ..+++...+    ..+++++++++|+||
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di-~~-~~~~a~dL~~~~~-~~~l~~~~~----t~d~~~a~~~aDvVv   73 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDI-AH-TPGVAADLSHIET-RATVKGYLG----PEQLPDCLKGCDVVV   73 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEES-SS-HHHHHHHHTTSSS-SCEEEEEES----GGGHHHHHTTCSEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeC-Cc-cHHHHHHHhccCc-CceEEEecC----CCCHHHHhCCCCEEE
Confidence            479999999999999999999888  78999999 43 2222222322110 011222111    234677889999999


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchh
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS  163 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  163 (327)
                      ++++.......... +.+..|+..++.+++.+.+..+..++|++|-..-.-.. -....+....         .-++...
T Consensus        74 i~ag~~~~~g~~r~-dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~-i~~~~~~~~~---------~~p~~rv  142 (314)
T 1mld_A           74 IPAGVPRKPGMTRD-DLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTIP-ITAEVFKKHG---------VYNPNKI  142 (314)
T ss_dssp             ECCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHH-HHHHHHHHTT---------CCCTTSE
T ss_pred             ECCCcCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCcchhHH-HHHHHHHHcC---------CCCcceE
Confidence            99987553333434 67899999999999999998755688877642110000 0000000000         0012233


Q ss_pred             hHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCC
Q 020334          164 YVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPF  198 (327)
Q Consensus       164 Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~  198 (327)
                      .|.+-+..-++....++..+++..-++ ..++|..
T Consensus       143 ig~t~Ld~~r~~~~la~~l~v~~~~v~-~~v~G~H  176 (314)
T 1mld_A          143 FGVTTLDIVRANAFVAELKGLDPARVS-VPVIGGH  176 (314)
T ss_dssp             EECCHHHHHHHHHHHHHHTTCCGGGCB-CCEEECS
T ss_pred             EEeecccHHHHHHHHHHHhCcChHhEE-EEEccCC
Confidence            455444455555556666677655555 5677865

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.79  E-value=1.4e-08  Score=76.59  Aligned_cols=73  Identities=21%  Similarity=0.266  Sum_probs=58.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi   83 (327)
                      |++|+|+|+ |.+|+++++.|.+.|++|+++++ +++...   .+..     .++.++.+|.++++.+.++ +.++|+||
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~-~~~~~~---~~~~-----~~~~~~~gd~~~~~~l~~~~~~~~d~vi   75 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDK-SKEKIE---LLED-----EGFDAVIADPTDESFYRSLDLEGVSAVL   75 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEES-CHHHHH---HHHH-----TTCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEEC-CHHHHH---HHHH-----CCCcEEECCCCCHHHHHhCCcccCCEEE
Confidence            568999997 99999999999999999999999 443322   2221     3578899999999988775 45799999


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      .+.+
T Consensus        76 ~~~~   79 (141)
T 3llv_A           76 ITGS   79 (141)
T ss_dssp             ECCS
T ss_pred             EecC
Confidence            8765

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.75  E-value=2.7e-07  Score=79.98  Aligned_cols=82  Identities=11%  Similarity=-0.054  Sum_probs=62.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHH-HCCCeEEEEEcCCCCCcchh------------hhhhCCCCCCCCeEEEeCCCCChhH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLL-DHGYFVTTTVRSDPEHKKDL------------SFLTNLPGASERLQIFNADLNDPES   71 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~~~~~~~~~~~D~~d~~~   71 (327)
                      +|++|||||+..+|.+.+..|+ +.|..|+++.+..+......            +.+..   .+.....+.+|+.|++.
T Consensus        50 pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~---~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           50 PKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKR---EGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH---HTCCEEEEESCTTSHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHH---cCCCceeEeCCCCCHHH
Confidence            5899999999999999999998 67999999998544332211            11111   13567899999999998


Q ss_pred             HHHHhc-------CCCEEEEccCCC
Q 020334           72 FDAAIA-------GCAGVIHVAAPI   89 (327)
Q Consensus        72 ~~~~~~-------~~d~vih~a~~~   89 (327)
                      ++++++       ++|++||++|..
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccc
Confidence            887764       689999999854

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.75  E-value=3.9e-08  Score=88.62  Aligned_cols=105  Identities=21%  Similarity=0.205  Sum_probs=74.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +++|+|+| +|++|+++++.|++.|++|++++| ++.+.   ..+...   ..++..+.+|+.|.+++.+++.++|+|||
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R-~~~~a---~~la~~---~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn   74 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACR-TLESA---KKLSAG---VQHSTPISLDVNDDAALDAEVAKHDLVIS   74 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEES-SHHHH---HHTTTT---CTTEEEEECCTTCHHHHHHHHTTSSEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEEC-CHHHH---HHHHHh---cCCceEEEeecCCHHHHHHHHcCCcEEEE
Confidence            67899998 799999999999999999999999 43322   222111   13477889999999999999999999999


Q ss_pred             ccCCCCCCCCchHHHHHHH--HH-------hHHHHHHHHHHhcC
Q 020334           85 VAAPIDIDGKETEEVMTQR--AV-------NGTIGILKSCLKSG  119 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~--nv-------~~~~~l~~~~~~~~  119 (327)
                      |++.....  ......++.  |+       ..+.++++++++.+
T Consensus        75 ~a~~~~~~--~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aG  116 (450)
T 1ff9_A           75 LIPYTFHA--TVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAG  116 (450)
T ss_dssp             CCC--CHH--HHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTT
T ss_pred             CCccccch--HHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCC
Confidence            99853211  011122222  21       25688889998887

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.71  E-value=3.6e-08  Score=87.83  Aligned_cols=101  Identities=20%  Similarity=0.312  Sum_probs=72.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC---CeEEEEEcCCCCCcchhh-hhhCCCCCCCCeEEEeCCCCChhHHHHHhcC--
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG---YFVTTTVRSDPEHKKDLS-FLTNLPGASERLQIFNADLNDPESFDAAIAG--   78 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--   78 (327)
                      |++|+|+|| |++|+.+++.|++.|   .+|.+.+| +..+...+. .+....  ..++..+.+|++|.+++.+++++  
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r-~~~~~~~la~~l~~~~--~~~~~~~~~D~~d~~~l~~~l~~~~   76 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASR-TLSKCQEIAQSIKAKG--YGEIDITTVDADSIEELVALINEVK   76 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEES-CHHHHHHHHHHHHHTT--CCCCEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEEC-CHHHHHHHHHHhhhhc--CCceEEEEecCCCHHHHHHHHHhhC
Confidence            468999998 999999999999988   38999999 543333322 221110  13578999999999999999986  


Q ss_pred             CCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           79 CAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        79 ~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      +|+||||+++..                 ...++++|.+.+  ++++-++
T Consensus        77 ~DvVin~ag~~~-----------------~~~v~~a~l~~g--~~vvD~a  107 (405)
T 4ina_A           77 PQIVLNIALPYQ-----------------DLTIMEACLRTG--VPYLDTA  107 (405)
T ss_dssp             CSEEEECSCGGG-----------------HHHHHHHHHHHT--CCEEESS
T ss_pred             CCEEEECCCccc-----------------ChHHHHHHHHhC--CCEEEec
Confidence            999999997421                 135677777777  4455443

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.66  E-value=2.9e-07  Score=69.09  Aligned_cols=74  Identities=19%  Similarity=0.161  Sum_probs=56.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi   83 (327)
                      .|+|+|+|+ |++|+.+++.|.+.|++|++++| ++.....   +...    .++..+.+|..+++.+.+. +.++|+||
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~-~~~~~~~---~~~~----~~~~~~~~d~~~~~~l~~~~~~~~d~vi   74 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDI-DKDICKK---ASAE----IDALVINGDCTKIKTLEDAGIEDADMYI   74 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHHHHH---HHHH----CSSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEC-CHHHHHH---HHHh----cCcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence            468999997 99999999999999999999999 4433222   2110    1457788999998877654 67899999


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      ++..
T Consensus        75 ~~~~   78 (140)
T 1lss_A           75 AVTG   78 (140)
T ss_dssp             ECCS
T ss_pred             EeeC
Confidence            9965

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.65  E-value=1.1e-07  Score=72.73  Aligned_cols=77  Identities=21%  Similarity=0.304  Sum_probs=59.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi   83 (327)
                      .++|+|+|+ |.+|+.+++.|.+.|++|++++++.+.....+....     ..++.++.+|.+|++.+.++ +.++|.||
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a~i~~ad~vi   76 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence            578999996 999999999999999999999993222222222211     13678999999999999876 78999999


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      -+.+
T Consensus        77 ~~~~   80 (153)
T 1id1_A           77 ALSD   80 (153)
T ss_dssp             ECSS
T ss_pred             EecC
Confidence            7765

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.64  E-value=2e-08  Score=86.60  Aligned_cols=174  Identities=16%  Similarity=0.049  Sum_probs=103.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC--e-----EEEEEcCCCC--C-cchhhhhhCCCCCCCCeEEEeCCCCChhHHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY--F-----VTTTVRSDPE--H-KKDLSFLTNLPGASERLQIFNADLNDPESFDA   74 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~~--~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~   74 (327)
                      .+||+||||+|+||++++..|+..|.  +     +..+++ .+.  . ......+.+..  .+-...    +.......+
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di-~~~~~~~~g~a~DL~~~~--~~~~~~----~~~~~~~~~   75 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDI-TPMMGVLDGVLMELQDCA--LPLLKD----VIATDKEEI   75 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECC-GGGHHHHHHHHHHHHHTC--CTTEEE----EEEESCHHH
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeC-CCccccchhhHhhhHhhh--hcccCC----EEEcCCcHH
Confidence            56899999999999999999998764  4     788877 321  1 11112222210  011111    111223456


Q ss_pred             HhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCcc-EEEEeccceeeeecCCCCCcccCCCCCChhH
Q 020334           75 AIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVK-RFVYTSSGSTVYFSGKDVDMLDETFWSDEDY  153 (327)
Q Consensus        75 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~  153 (327)
                      .++++|+|||+||.......... +.++.|+..+++++++++++++.. +++.+|...-.-     -...-+...     
T Consensus        76 ~~~daDvVvitAg~prkpG~tR~-dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd~~-----t~~~~~~~~-----  144 (333)
T 5mdh_A           76 AFKDLDVAILVGSMPRRDGMERK-DLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTN-----CLTASKSAP-----  144 (333)
T ss_dssp             HTTTCSEEEECCSCCCCTTCCTT-TTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH-----HHHHHHTCT-----
T ss_pred             HhCCCCEEEEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchHHH-----HHHHHHHcC-----
Confidence            68899999999986543333444 778999999999999999988333 677777421000     000001100     


Q ss_pred             hhhcCCCchhh-HhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          154 IRKLDIWGKSY-VLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       154 ~~~~~~~~~~Y-~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                          ..|.... +.+-+..-++-...+++.+++...++-..|+|...+
T Consensus       145 ----~~p~~~ig~~t~LDs~R~~~~la~~l~v~~~~v~~~vV~GeHgd  188 (333)
T 5mdh_A          145 ----SIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSS  188 (333)
T ss_dssp             ----TSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred             ----CCCcCEEEEEEhHHHHHHHHHHHHHhCcCHHHeeecEEEEcCCC
Confidence                0111122 345555556666666777877777776656887543

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.59  E-value=1.7e-07  Score=75.79  Aligned_cols=77  Identities=25%  Similarity=0.360  Sum_probs=54.4

Q ss_pred             CCCeEEEeCC----------------cchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCC
Q 020334            4 QKGKVCVTGG----------------TGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN   67 (327)
Q Consensus         4 ~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   67 (327)
                      .+|+||||||                ||.+|.+++++|+++|++|+.+.|... ....         ...++..+  |+.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~-~~~~---------~~~~~~~~--~v~   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRA-LKPE---------PHPNLSIR--EIT   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTS-CCCC---------CCTTEEEE--ECC
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcc-cccc---------CCCCeEEE--EHh
Confidence            3689999999                999999999999999999999999322 1110         01245554  344


Q ss_pred             ChhHH----HHHhcCCCEEEEccCCCCCC
Q 020334           68 DPESF----DAAIAGCAGVIHVAAPIDID   92 (327)
Q Consensus        68 d~~~~----~~~~~~~d~vih~a~~~~~~   92 (327)
                      ..+++    .+.+.++|++||+||..++.
T Consensus        70 s~~em~~~v~~~~~~~Dili~aAAvsD~~   98 (232)
T 2gk4_A           70 NTKDLLIEMQERVQDYQVLIHSMAVSDYT   98 (232)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECSBCCSEE
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCcccccc
Confidence            44433    33455799999999976643

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.53  E-value=2.1e-06  Score=65.71  Aligned_cols=74  Identities=14%  Similarity=0.090  Sum_probs=57.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi   83 (327)
                      .++|+|+|+ |.+|..+++.|.+.|++|++++| ++.....+.   .    ..++..+.+|..+++.+.+. +.++|+||
T Consensus        19 ~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~-~~~~~~~~~---~----~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi   89 (155)
T 2g1u_A           19 SKYIVIFGC-GRLGSLIANLASSSGHSVVVVDK-NEYAFHRLN---S----EFSGFTVVGDAAEFETLKECGMEKADMVF   89 (155)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CGGGGGGSC---T----TCCSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCeEEEEEC-CHHHHHHHH---h----cCCCcEEEecCCCHHHHHHcCcccCCEEE
Confidence            578999996 99999999999999999999999 543332221   0    12456788999888777665 67899999


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      .+.+
T Consensus        90 ~~~~   93 (155)
T 2g1u_A           90 AFTN   93 (155)
T ss_dssp             ECSS
T ss_pred             EEeC
Confidence            8876

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.51  E-value=3.9e-07  Score=78.73  Aligned_cols=169  Identities=11%  Similarity=-0.011  Sum_probs=100.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      ++||.|+|++|++|+.++..|+..|  .+|..+++ +..+... ...+........++.+       ..++.+.++++|+
T Consensus         8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi-~~~k~~g~a~DL~~~~~~~~~i~~-------t~d~~~al~dADv   79 (343)
T 3fi9_A            8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDP-FAVGLEGVAEEIRHCGFEGLNLTF-------TSDIKEALTDAKY   79 (343)
T ss_dssp             SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECS-CHHHHHHHHHHHHHHCCTTCCCEE-------ESCHHHHHTTEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeC-CchhHHHHHHhhhhCcCCCCceEE-------cCCHHHHhCCCCE
Confidence            5789999999999999999999888  58999988 4322221 1112111100112221       1235567889999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCcc-EEEEeccce---eeeecCCCCCcccCCCCCChhHhhhc
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVK-RFVYTSSGS---TVYFSGKDVDMLDETFWSDEDYIRKL  157 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~v~~SS~~---v~~~~~~~~~~~~E~~~~~~~~~~~~  157 (327)
                      ||.+||.......... +.+..|+...+.+++.+.+..+.. .++.+|...   +|-.       .....          
T Consensus        80 VvitaG~p~kpG~~R~-dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPvd~~t~i~-------~k~sg----------  141 (343)
T 3fi9_A           80 IVSSGGAPRKEGMTRE-DLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADITGLVT-------LIYSG----------  141 (343)
T ss_dssp             EEECCC-------CHH-HHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSHHHHHHHH-------HHHHT----------
T ss_pred             EEEccCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhccCcEEEEEecCchHHHHHHH-------HHHcC----------
Confidence            9999986543333333 789999999999999999987444 356665321   0100       00000          


Q ss_pred             CCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCC
Q 020334          158 DIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFI  199 (327)
Q Consensus       158 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~  199 (327)
                      -++....+.+-+..-++....+++.+++..-++-..|+|...
T Consensus       142 ~p~~rv~g~t~LDs~R~~~~la~~l~v~~~~v~~~~ViGeHg  183 (343)
T 3fi9_A          142 LKPSQVTTLAGLDSTRLQSELAKHFGIKQSLVTNTRTYGGHG  183 (343)
T ss_dssp             CCGGGEEEECCHHHHHHHHHHHHHHTSCGGGEECCCEEESSG
T ss_pred             CCcceEEEecCcHHHHHHHHHHHHhCcCHHHcccceEEEcCC
Confidence            011222344555555666666777787776676556888654

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.48  E-value=2.9e-07  Score=83.15  Aligned_cols=76  Identities=21%  Similarity=0.260  Sum_probs=60.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      .+++|+|+|| |++|+++++.|++. |++|++++| ++++...+.   ..    .++..+.+|+.|.+++.+++.++|+|
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R-~~~ka~~la---~~----~~~~~~~~D~~d~~~l~~~l~~~DvV   92 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACR-TLANAQALA---KP----SGSKAISLDVTDDSALDKVLADNDVV   92 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEES-SHHHHHHHH---GG----GTCEEEECCTTCHHHHHHHHHTSSEE
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEEC-CHHHHHHHH---Hh----cCCcEEEEecCCHHHHHHHHcCCCEE
Confidence            4678999997 99999999999998 789999999 443332221   11    14677889999998999889999999


Q ss_pred             EEccCC
Q 020334           83 IHVAAP   88 (327)
Q Consensus        83 ih~a~~   88 (327)
                      |||++.
T Consensus        93 In~tp~   98 (467)
T 2axq_A           93 ISLIPY   98 (467)
T ss_dssp             EECSCG
T ss_pred             EECCch
Confidence            999875

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.48  E-value=7.2e-07  Score=76.62  Aligned_cols=174  Identities=16%  Similarity=0.128  Sum_probs=104.2

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcch-hhhhhCC-CCCCCCeEEEeCCCCChhHHHHHh
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKD-LSFLTNL-PGASERLQIFNADLNDPESFDAAI   76 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~   76 (327)
                      |+..++||.|+|+ |++|+.++..|+..|.  +|.++++ +.+.... ...+... +....+++....|.       +.+
T Consensus         1 m~~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~-~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~-------~a~   71 (326)
T 3pqe_A            1 MNKHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDV-NKEKAMGDVMDLNHGKAFAPQPVKTSYGTY-------EDC   71 (326)
T ss_dssp             -CCSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-CHHHHHHHHHHHHHTGGGSSSCCEEEEECG-------GGG
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEec-chHHHHHHHHHHHhccccccCCeEEEeCcH-------HHh
Confidence            6555789999996 9999999999999886  8999998 4332222 1112111 10012344433331       357


Q ss_pred             cCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhh
Q 020334           77 AGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRK  156 (327)
Q Consensus        77 ~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~  156 (327)
                      +++|+||.+||.......... +.+..|+...+.+++.+.+..+...++.+|-..-.         +++-.      ...
T Consensus        72 ~~aDvVvi~ag~p~kpG~~R~-dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPvd~---------~t~~~------~k~  135 (326)
T 3pqe_A           72 KDADIVCICAGANQKPGETRL-ELVEKNLKIFKGIVSEVMASGFDGIFLVATNPVDI---------LTYAT------WKF  135 (326)
T ss_dssp             TTCSEEEECCSCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHH---------HHHHH------HHH
T ss_pred             CCCCEEEEecccCCCCCccHH-HHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChHHH---------HHHHH------HHh
Confidence            789999999986443333333 78999999999999999998755567766632100         00000      000


Q ss_pred             c-CCCchhhHh-hhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          157 L-DIWGKSYVL-TKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       157 ~-~~~~~~Y~~-sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                      . -++....|. +-+..-++....++..|++..-++- .|+|....
T Consensus       136 ~g~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~V~~-~V~GeHG~  180 (326)
T 3pqe_A          136 SGLPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVCA-HIIGEHGD  180 (326)
T ss_dssp             HCCCGGGEEECTTHHHHHHHHHHHHHHHTCCGGGEEC-CEEBSSST
T ss_pred             cCCCHHHEEeeccccHHHHHHHHHHHHhCCCHHHcee-eeeecCCC
Confidence            0 012223454 4444455555566667777666665 58887633

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.43  E-value=9.1e-07  Score=71.38  Aligned_cols=73  Identities=19%  Similarity=0.152  Sum_probs=53.9

Q ss_pred             CCCeEEEeCC----------------cchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCC
Q 020334            4 QKGKVCVTGG----------------TGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN   67 (327)
Q Consensus         4 ~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   67 (327)
                      .+++||||||                ||.+|.++++.|+++|++|+++.+.. . .. .         ..++.  ..|+.
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~-~-l~-~---------~~g~~--~~dv~   72 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV-S-LP-T---------PPFVK--RVDVM   72 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC-C-CC-C---------CTTEE--EEECC
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc-c-cc-c---------CCCCe--EEccC
Confidence            3689999999                79999999999999999999988832 1 10 0         12333  35777


Q ss_pred             ChhHHHHH----hcCCCEEEEccCCCC
Q 020334           68 DPESFDAA----IAGCAGVIHVAAPID   90 (327)
Q Consensus        68 d~~~~~~~----~~~~d~vih~a~~~~   90 (327)
                      +.+++.+.    +.++|++||+||..+
T Consensus        73 ~~~~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           73 TALEMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             cHHHHHHHHHHhcCCCCEEEECCcccC
Confidence            76655433    347999999999754

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=98.38  E-value=4.2e-06  Score=71.86  Aligned_cols=115  Identities=12%  Similarity=0.122  Sum_probs=73.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      +++||.|+|+ |++|..++..|+..|.  +|..+++ +.++... ...+.+.......+++..   .+.    +.++++|
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di-~~~~~~g~~~dl~~~~~~~~~~~i~~---~~~----~a~~~aD   76 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDV-FKEKAIGEAMDINHGLPFMGQMSLYA---GDY----SDVKDCD   76 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECC-C---CCHHHHHHTTSCCCTTCEEEC-----CG----GGGTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-ChHHHHHHHHHHHHhHHhcCCeEEEE---CCH----HHhCCCC
Confidence            3568999998 9999999999999886  8999999 4433322 233322211112333322   222    3478999


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      +||.+++.......... +.+..|+...+.+++.+.+..+...++.+|
T Consensus        77 vVii~~g~p~k~g~~r~-dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (318)
T 1y6j_A           77 VIVVTAGANRKPGETRL-DLAKKNVMIAKEVTQNIMKYYNHGVILVVS  123 (318)
T ss_dssp             EEEECCCC------CHH-HHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EEEEcCCCCCCCCcCHH-HHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence            99999986432233333 778999999999999999876445666543

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.34  E-value=1.5e-06  Score=65.21  Aligned_cols=74  Identities=15%  Similarity=0.139  Sum_probs=59.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~v   82 (327)
                      ++++|+|.|+ |.+|..+++.|.+.|++|+++++ +++....+.   .     .++..+.+|.++++.+.++ +.++|.|
T Consensus         6 ~~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~-~~~~~~~~~---~-----~g~~~i~gd~~~~~~l~~a~i~~ad~v   75 (140)
T 3fwz_A            6 ICNHALLVGY-GRVGSLLGEKLLASDIPLVVIET-SRTRVDELR---E-----RGVRAVLGNAANEEIMQLAHLECAKWL   75 (140)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEES-CHHHHHHHH---H-----TTCEEEESCTTSHHHHHHTTGGGCSEE
T ss_pred             CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEEC-CHHHHHHHH---H-----cCCCEEECCCCCHHHHHhcCcccCCEE
Confidence            4578999996 99999999999999999999999 544333222   1     3678899999999988765 5688999


Q ss_pred             EEccC
Q 020334           83 IHVAA   87 (327)
Q Consensus        83 ih~a~   87 (327)
                      |-+.+
T Consensus        76 i~~~~   80 (140)
T 3fwz_A           76 ILTIP   80 (140)
T ss_dssp             EECCS
T ss_pred             EEECC
Confidence            87765

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.31  E-value=4.1e-06  Score=65.93  Aligned_cols=73  Identities=18%  Similarity=0.215  Sum_probs=58.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH--hcCCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA--IAGCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~--~~~~d~   81 (327)
                      +++|+|+| .|.+|..+++.|.+. |++|+++++ ++.....   +..     .++..+.+|.++++.+.++  +.++|.
T Consensus        39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~-~~~~~~~---~~~-----~g~~~~~gd~~~~~~l~~~~~~~~ad~  108 (183)
T 3c85_A           39 HAQVLILG-MGRIGTGAYDELRARYGKISLGIEI-REEAAQQ---HRS-----EGRNVISGDATDPDFWERILDTGHVKL  108 (183)
T ss_dssp             TCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEES-CHHHHHH---HHH-----TTCCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEEC-CHHHHHH---HHH-----CCCCEEEcCCCCHHHHHhccCCCCCCE
Confidence            46899999 599999999999999 999999999 5433322   221     2567788999999888776  778999


Q ss_pred             EEEccC
Q 020334           82 VIHVAA   87 (327)
Q Consensus        82 vih~a~   87 (327)
                      ||.+.+
T Consensus       109 vi~~~~  114 (183)
T 3c85_A          109 VLLAMP  114 (183)
T ss_dssp             EEECCS
T ss_pred             EEEeCC
Confidence            998765

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.28  E-value=1.9e-06  Score=69.98  Aligned_cols=73  Identities=21%  Similarity=0.236  Sum_probs=57.9

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVIH   84 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vih   84 (327)
                      |+|+|+|+ |.+|+++++.|.+.|++|+++++ +++....+...       .++.++.+|.++++.+.++ +.++|.||-
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~-~~~~~~~l~~~-------~~~~~i~gd~~~~~~l~~a~i~~ad~vi~   71 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINK-DRELCEEFAKK-------LKATIIHGDGSHKEILRDAEVSKNDVVVI   71 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEES-CHHHHHHHHHH-------SSSEEEESCTTSHHHHHHHTCCTTCEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEC-CHHHHHHHHHH-------cCCeEEEcCCCCHHHHHhcCcccCCEEEE
Confidence            46999996 99999999999999999999999 54433322211       2568899999999998876 678999996


Q ss_pred             ccC
Q 020334           85 VAA   87 (327)
Q Consensus        85 ~a~   87 (327)
                      +.+
T Consensus        72 ~~~   74 (218)
T 3l4b_C           72 LTP   74 (218)
T ss_dssp             CCS
T ss_pred             ecC
Confidence            654

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=98.27  E-value=2.2e-06  Score=73.48  Aligned_cols=172  Identities=15%  Similarity=0.130  Sum_probs=91.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      .++||.|+|+ |.+|++++..|+..|.  +|..+++ +.+.... ...+.+.......++...+|.       +.++++|
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~-~~~k~~g~a~DL~~~~~~~~~~~i~~~~~-------~a~~~aD   78 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDI-FKDKTKGDAIDLEDALPFTSPKKIYSAEY-------SDAKDAD   78 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-CHHHHHHHHHHHHTTGGGSCCCEEEECCG-------GGGTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeC-ChHHHHHHHhhHhhhhhhcCCcEEEECcH-------HHhcCCC
Confidence            3578999996 9999999999998876  8999988 4332221 112221100012344443332       3477899


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      +||++||.......... +.++.|+...+.+.+.+.+..+...++.+|-..-         .+++-.+   . . ..-++
T Consensus        79 iVvi~ag~~~kpG~tR~-dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPvd---------i~t~~~~---k-~-~g~p~  143 (326)
T 3vku_A           79 LVVITAGAPQKPGETRL-DLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVD---------ILTYATW---K-L-SGFPK  143 (326)
T ss_dssp             EEEECCCCC-----------------CHHHHHHHHHTTTCCSEEEECSSSHH---------HHHHHHH---H-H-HCCCG
T ss_pred             EEEECCCCCCCCCchHH-HHHHHHHHHHHHHHHHHHhcCCceEEEEccCchH---------HHHHHHH---H-h-cCCCH
Confidence            99999986433233333 7789999999999999999875556776663210         0000000   0 0 00012


Q ss_pred             chhhHh-hhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          161 GKSYVL-TKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       161 ~~~Y~~-sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                      ....|. +-+..-++....++..|++..-++- .|+|....
T Consensus       144 ~rviG~gt~LD~~R~~~~la~~lgv~~~~V~~-~ViGeHGd  183 (326)
T 3vku_A          144 NRVVGSGTSLDTARFRQSIAKMVNVDARSVHA-YIMGEHGD  183 (326)
T ss_dssp             GGEEECTTHHHHHHHHHHHHHHHTSCGGGEEC-CEEBSSST
T ss_pred             HHeeeecccCcHHHHHHHHHHHhCCCHHHCeE-EEEcCCCC
Confidence            223443 4444445555566666776666665 58887643

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.22  E-value=1.1e-06  Score=73.56  Aligned_cols=37  Identities=24%  Similarity=0.413  Sum_probs=29.0

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHH-CCCeEEEEEc
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLD-HGYFVTTTVR   37 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r   37 (327)
                      |...++||.|+|++|.+|+.+++.+.+ .|+++.++..
T Consensus         1 ~~~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d   38 (273)
T 1dih_A            1 MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALE   38 (273)
T ss_dssp             -CCCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEEC
T ss_pred             CCCCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            553357999999999999999999885 4788875554

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=98.22  E-value=4.6e-06  Score=71.29  Aligned_cols=119  Identities=18%  Similarity=0.115  Sum_probs=78.2

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCC-CCCcchh-hhhhCC---CCCCCCeEEEeCCCCChhHHHH
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSD-PEHKKDL-SFLTNL---PGASERLQIFNADLNDPESFDA   74 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~-~~~~~~~-~~~~~~---~~~~~~~~~~~~D~~d~~~~~~   74 (327)
                      |+..+++|.|+|+ |.+|+.++..|+..|+ +|..++++. ....... ..+...   .....++.. ..|   .    +
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d---~----~   74 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD---Y----A   74 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC---G----G
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC---H----H
Confidence            4333568999996 9999999999999999 999999931 2111111 111100   000112221 122   2    3


Q ss_pred             HhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           75 AIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        75 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      .++++|+||-++|.......... +.+..|+...+.+.+.+.+..+...++.+|.
T Consensus        75 a~~~aDvVIiaag~p~kpg~~R~-dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           75 DTADSDVVVITAGIARKPGMSRD-DLVATNSKIMKSITRDIAKHSPNAIIVVLTN  128 (315)
T ss_dssp             GGTTCSEEEECCSCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             HhCCCCEEEEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence            57789999999986543344444 8899999999999999998875557776663

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=98.19  E-value=1.2e-05  Score=68.46  Aligned_cols=173  Identities=17%  Similarity=0.074  Sum_probs=102.2

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHC-C--CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDH-G--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      |||.|+||+|++|..++..|..+ +  .++..+++ ++........+.+.+   ...+.....-.+   ..+.++++|+|
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di-~~~~~G~a~Dl~~~~---~~~~v~~~~~~~---~~~~~~~aDiv   73 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDI-APVTPGVAVDLSHIP---TAVKIKGFSGED---ATPALEGADVV   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECS-STTHHHHHHHHHTSC---SSEEEEEECSSC---CHHHHTTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEec-CCCchhHHHHhhCCC---CCceEEEecCCC---cHHHhCCCCEE
Confidence            47999999999999999999875 4  57888888 432222223333321   122221100011   23457789999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcc-cCCCCCChhHhhhcCCCc
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDML-DETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~-~E~~~~~~~~~~~~~~~~  161 (327)
                      |.+||.......... +.++.|+...+.+.+.+.+..+...++.+|-..-.      ..++ .|..    . ....-++.
T Consensus        74 ii~ag~~rkpG~~R~-dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd~------~t~~a~~~~----k-~sg~~p~~  141 (312)
T 3hhp_A           74 LISAGVARKPGMDRS-DLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNT------TVAIAAEVL----K-KAGVYDKN  141 (312)
T ss_dssp             EECCSCSCCTTCCHH-HHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHH------HHHHHHHHH----H-HTTCCCTT
T ss_pred             EEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcchh------HHHHHHHHH----H-HcCCCCcc
Confidence            999986543344444 88999999999999999988745567766632100      0000 0000    0 00000223


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCC
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPF  198 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~  198 (327)
                      ...|..-+..-++....++..+++..-++ ..|+|..
T Consensus       142 rv~G~~~LD~~R~~~~la~~lgv~~~~v~-~~V~G~H  177 (312)
T 3hhp_A          142 KLFGVTTLDIIRSNTFVAELKGKQPGEVE-VPVIGGH  177 (312)
T ss_dssp             SEEECCHHHHHHHHHHHHHHHTCCGGGCC-CCEEECS
T ss_pred             eEEEEechhHHHHHHHHHHHhCcChhHcc-eeEEecc
Confidence            34555533445555556666787777777 6788876

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.15  E-value=4.9e-06  Score=66.37  Aligned_cols=97  Identities=15%  Similarity=0.089  Sum_probs=62.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhH---HHHHhc--CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPES---FDAAIA--GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~--~~   79 (327)
                      +++|||+||+|.||..+++.+...|++|++++| +++.....   ...     +... ..|..+.+.   +.+...  ++
T Consensus        39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~-~~~~~~~~---~~~-----g~~~-~~d~~~~~~~~~~~~~~~~~~~  108 (198)
T 1pqw_A           39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAG-SDAKREML---SRL-----GVEY-VGDSRSVDFADEILELTDGYGV  108 (198)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES-SHHHHHHH---HTT-----CCSE-EEETTCSTHHHHHHHHTTTCCE
T ss_pred             CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeC-CHHHHHHH---HHc-----CCCE-EeeCCcHHHHHHHHHHhCCCCC
Confidence            578999999999999999999999999999998 43322222   221     1111 135555433   333332  58


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS  131 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~  131 (327)
                      |+||++++.          ..       ....++.++..   .+++.+++..
T Consensus       109 D~vi~~~g~----------~~-------~~~~~~~l~~~---G~~v~~g~~~  140 (198)
T 1pqw_A          109 DVVLNSLAG----------EA-------IQRGVQILAPG---GRFIELGKKD  140 (198)
T ss_dssp             EEEEECCCT----------HH-------HHHHHHTEEEE---EEEEECSCGG
T ss_pred             eEEEECCch----------HH-------HHHHHHHhccC---CEEEEEcCCC
Confidence            999999872          11       23445555543   4899888743

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=98.15  E-value=2.3e-05  Score=67.69  Aligned_cols=118  Identities=16%  Similarity=0.093  Sum_probs=75.6

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcch-hhhhhC---CCCCCCCeEEEeCCCCChhHHHHH
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKD-LSFLTN---LPGASERLQIFNADLNDPESFDAA   75 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~   75 (327)
                      |..+++||.|+|| |.+|+.++..|+..|+ +|..+++ +++.... ...+.+   ......+++..       .++++.
T Consensus         5 ~~~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~-~~~~~~~~~~~l~~~~~~~~~~~~i~~t-------~d~~ea   75 (331)
T 1pzg_A            5 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDV-VKGMPEGKALDLSHVTSVVDTNVSVRAE-------YSYEAA   75 (331)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECS-SSSHHHHHHHHHHHHHHHTTCCCCEEEE-------CSHHHH
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEEC-ChhHHHHHHHHHHhhhhccCCCCEEEEe-------CCHHHH
Confidence            3334468999998 9999999999999998 9999998 5433332 111111   00011222211       224456


Q ss_pred             hcCCCEEEEccCCCCCCCC-----chHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           76 IAGCAGVIHVAAPIDIDGK-----ETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        76 ~~~~d~vih~a~~~~~~~~-----~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      ++++|+||-+++.......     ... +....|+...+.+.+.+.+..+...++.+|
T Consensus        76 ~~~aDiVi~a~g~p~~~g~~~~~~~r~-dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  132 (331)
T 1pzg_A           76 LTGADCVIVTAGLTKVPGKPDSEWSRN-DLLPFNSKIIREIGQNIKKYCPKTFIIVVT  132 (331)
T ss_dssp             HTTCSEEEECCSCSSCTTCCGGGCCGG-GGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             hCCCCEEEEccCCCCCCCcccCCCCHH-HHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            8899999999975432222     233 667889999999999999886334555443

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=98.11  E-value=1.7e-05  Score=67.81  Aligned_cols=113  Identities=13%  Similarity=0.098  Sum_probs=69.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcch-hhhhhCC---CCCCCCeEEEeCCCCChhHHHHHhcC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKD-LSFLTNL---PGASERLQIFNADLNDPESFDAAIAG   78 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~   78 (327)
                      |++||.|+|| |.+|+.++..|+..|+ +|..+++ +++.... ...+...   .....++.. ..|      + +.+++
T Consensus         1 M~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di-~~~~~~g~~~dl~~~~~~~~~~~~i~~-t~d------~-~a~~~   70 (309)
T 1ur5_A            1 MRKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDI-VEGVPQGKALDLYEASPIEGFDVRVTG-TNN------Y-ADTAN   70 (309)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS-SSSHHHHHHHHHHTTHHHHTCCCCEEE-ESC------G-GGGTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-CccHHHHHHHhHHHhHhhcCCCeEEEE-CCC------H-HHHCC
Confidence            3578999998 9999999999999996 8888888 4433221 1122111   000112221 123      2 34778


Q ss_pred             CCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEe
Q 020334           79 CAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYT  127 (327)
Q Consensus        79 ~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~  127 (327)
                      +|+||.+++.......... +....|+...+.+.+.+.+..+...++.+
T Consensus        71 aD~Vi~a~g~p~~~g~~r~-dl~~~n~~i~~~i~~~i~~~~p~a~vi~~  118 (309)
T 1ur5_A           71 SDVIVVTSGAPRKPGMSRE-DLIKVNADITRACISQAAPLSPNAVIIMV  118 (309)
T ss_dssp             CSEEEECCCC--------C-HHHHHHHHHHHHHHHHHGGGCTTCEEEEC
T ss_pred             CCEEEEcCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHhhCCCeEEEEc
Confidence            9999999986442222222 66788999999999999988733344443

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=98.08  E-value=2.9e-05  Score=67.00  Aligned_cols=173  Identities=17%  Similarity=0.058  Sum_probs=105.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCC-------eEEEEEcCCCCCc--ch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHH
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGY-------FVTTTVRSDPEHK--KD-LSFLTNLPGASERLQIFNADLNDPESFDAA   75 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~--~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~   75 (327)
                      -||.|+||+|.||++|+-.|+....       ++..++. .+...  .. ...+..... ........++  |   ..+.
T Consensus        25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di-~~~~~~~~Gva~DL~~~~~-~~~~~~~~~~--~---~~~a   97 (345)
T 4h7p_A           25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDI-EPALKALAGVEAELEDCAF-PLLDKVVVTA--D---PRVA   97 (345)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECC-GGGHHHHHHHHHHHHHTTC-TTEEEEEEES--C---HHHH
T ss_pred             CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECC-CCccccchhhhhhhhhcCc-cCCCcEEEcC--C---hHHH
Confidence            4899999999999999999887532       6777776 32111  11 112222110 0112222221  2   3456


Q ss_pred             hcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccce---eeeecCCCCCcccCCCCCCh
Q 020334           76 IAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGS---TVYFSGKDVDMLDETFWSDE  151 (327)
Q Consensus        76 ~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~---v~~~~~~~~~~~~E~~~~~~  151 (327)
                      ++++|+||-+||...-...... +.++.|....+.+.+.+.+.. +..+++.+|-..   +|-       ......    
T Consensus        98 ~~~advVvi~aG~prkpGmtR~-DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~i-------~~~~~~----  165 (345)
T 4h7p_A           98 FDGVAIAIMCGAFPRKAGMERK-DLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALI-------LLKSAQ----  165 (345)
T ss_dssp             TTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHH-------HHHHTT----
T ss_pred             hCCCCEEEECCCCCCCCCCCHH-HHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHHH-------HHHHcc----
Confidence            8899999999997654444555 889999999999999998864 234566666321   010       000000    


Q ss_pred             hHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCC
Q 020334          152 DYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICP  201 (327)
Q Consensus       152 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~  201 (327)
                          ...++...-+.+-+..-++-...+++.+++..-++-..|.|.....
T Consensus       166 ----g~~~~r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~t  211 (345)
T 4h7p_A          166 ----GKLNPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHSST  211 (345)
T ss_dssp             ----TCSCGGGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSSTT
T ss_pred             ----CCCCcceeeeccchhHHHHHHHHHHHHCcChhheecceeecCCCCe
Confidence                0012344456666666676667777788887777777788876443

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=98.07  E-value=3e-05  Score=65.54  Aligned_cols=166  Identities=12%  Similarity=0.084  Sum_probs=99.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcch----hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKD----LSFLTNLPGASERLQIFNADLNDPESFDAAIAGC   79 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~   79 (327)
                      |||.|+|+ |.+|++++..|+..|+  +|..+++ +++....    +.+.....  ....+....  .|    .+.++++
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~-~~~~~~g~~~dl~~~~~~~--~~~~~i~~t--~d----~~a~~~a   70 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDI-AEDLAVGEAMDLAHAAAGI--DKYPKIVGG--AD----YSLLKGS   70 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECS-SHHHHHHHHHHHHHHHHTT--TCCCEEEEE--SC----GGGGTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEEC-ChHHHHHHHHHHHhhhhhc--CCCCEEEEe--CC----HHHhCCC
Confidence            47999998 9999999999999887  8999999 4433221    11111100  012222211  12    2357789


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |+||.+++.......... +.+..|+...+.+.+.+.+.++...++.+|-..-.-    .........          -+
T Consensus        71 DiVViaag~~~kpG~~R~-dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPvd~~----t~~~~k~~g----------~p  135 (294)
T 1oju_A           71 EIIVVTAGLARKPGMTRL-DLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVM----TYIMWKESG----------KP  135 (294)
T ss_dssp             SEEEECCCCCCCSSCCHH-HHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHH----HHHHHHHSC----------CC
T ss_pred             CEEEECCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcchHH----HHHHHHhcC----------CC
Confidence            999999986543333444 889999999999999999987556777776421000    000000000          01


Q ss_pred             CchhhHh-hhHHHHHHHHHHHHHcCCcEEEEecCceecCCC
Q 020334          160 WGKSYVL-TKTLTERAALEFAEEHGLDLVTLIPSFVVGPFI  199 (327)
Q Consensus       160 ~~~~Y~~-sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~  199 (327)
                      +....|. +-+..-++-...+ +.+++...  -..|+|...
T Consensus       136 ~~rviG~gt~LD~~R~~~~la-~l~v~~~~--~~~V~G~Hg  173 (294)
T 1oju_A          136 RNEVFGMGNQLDSQRLKERLY-NAGARNIR--RAWIIGEHG  173 (294)
T ss_dssp             TTSEEECSHHHHHHHHHHHHH-HTTCBSCC--CCCEEBCSS
T ss_pred             HHHEeecccccHHHHHHHHHH-HhCCCccC--ceEEEecCC
Confidence            2233455 3454555555556 67777666  566888763

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=98.05  E-value=3.5e-05  Score=66.08  Aligned_cols=115  Identities=12%  Similarity=0.008  Sum_probs=77.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcc-hhhhhhCCCC-CCCCeEEE-eCCCCChhHHHHHhcCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKK-DLSFLTNLPG-ASERLQIF-NADLNDPESFDAAIAGCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-~~~~~~~~~~-~~~~~~~~-~~D~~d~~~~~~~~~~~d   80 (327)
                      ++||.|+|+ |.+|+.++..|+..|. +|..+++ +++... ....+.+... .....+.. ..|   .    +.++++|
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di-~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d---~----~a~~~aD   75 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDI-AQGMPNGKALDLLQTCPIEGVDFKVRGTND---Y----KDLENSD   75 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECS-SSSHHHHHHHHHHTTHHHHTCCCCEEEESC---G----GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeC-ChHHHHHHHHHHHhhhhhcCCCcEEEEcCC---H----HHHCCCC
Confidence            578999995 9999999999999887 9999998 544322 1122221100 00122222 122   2    3577899


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      +||.+++.......... +.+..|+...+.+++.+.+..+-..++.+|-
T Consensus        76 vVIi~ag~p~k~G~~R~-dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  123 (321)
T 3p7m_A           76 VVIVTAGVPRKPGMSRD-DLLGINIKVMQTVGEGIKHNCPNAFVICITN  123 (321)
T ss_dssp             EEEECCSCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EEEEcCCcCCCCCCCHH-HHHHHhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            99999986543333443 7889999999999999999875557776653

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=98.04  E-value=2e-05  Score=67.57  Aligned_cols=118  Identities=15%  Similarity=0.166  Sum_probs=75.8

Q ss_pred             CCCC-CCeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcch-hhhhhC-CCCCCCCeEEEeCCCCChhHHHHH
Q 020334            1 MEEQ-KGKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKD-LSFLTN-LPGASERLQIFNADLNDPESFDAA   75 (327)
Q Consensus         1 m~~~-~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~   75 (327)
                      |..| ++||.|+|| |.+|..++..|+..|  .+|..+++ ++..... ...+.. .+.....++... |  +    .+.
T Consensus         1 m~~m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di-~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a   71 (317)
T 3d0o_A            1 MNKFKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDL-DTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSD   71 (317)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECS-CHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGG
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-ChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHH
Confidence            5433 468999998 999999999999887  48888888 4322221 111111 000012333332 2  2    234


Q ss_pred             hcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           76 IAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        76 ~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      ++++|+||.+++.......... +.+..|+...+.+.+.+.+..+-..++.+|
T Consensus        72 ~~~aDvVvi~ag~~~~~g~~r~-dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           72 CHDADLVVICAGAAQKPGETRL-DLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             GTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             hCCCCEEEECCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            7799999999986543333444 778999999999999999887555666654

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=98.03  E-value=3e-05  Score=66.49  Aligned_cols=114  Identities=16%  Similarity=0.051  Sum_probs=75.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcch-hhhhhCC---CCCCCCeEEEeCCCCChhHHHHHhcCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKD-LSFLTNL---PGASERLQIFNADLNDPESFDAAIAGC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~   79 (327)
                      ++||.|+|| |.+|+.++..|+..|+ +|..+++ +++.... ...+.+.   .....++.. ..|   .    +.++++
T Consensus         7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di-~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~----~a~~~a   76 (324)
T 3gvi_A            7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDI-AEGTPQGKGLDIAESSPVDGFDAKFTG-AND---Y----AAIEGA   76 (324)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECS-SSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---G----GGGTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeC-CchhHHHHHHHHhchhhhcCCCCEEEE-eCC---H----HHHCCC
Confidence            568999998 9999999999999998 9999999 5443221 1111110   000112221 123   2    357789


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      |+||.+++.......... +.+..|+...+.+++.+.+..+-..++.+|-
T Consensus        77 DiVIiaag~p~k~G~~R~-dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           77 DVVIVTAGVPRKPGMSRD-DLLGINLKVMEQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             SEEEECCSCCCC-----C-HHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CEEEEccCcCCCCCCCHH-HHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence            999999986443323333 6788999999999999999875557776664

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.99  E-value=3.2e-05  Score=66.50  Aligned_cols=169  Identities=15%  Similarity=0.118  Sum_probs=98.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      +++||.|+|| |.+|+.++..|+..+.  +|..+++ +.++... ...+.+.......+++.. |  +    .+.++++|
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di-~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~aD   78 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDI-FKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKDAD   78 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-CHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeC-CchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCC
Confidence            3578999998 9999999999988775  8999988 4332222 222222110012333332 2  2    23477899


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhc-CC
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKL-DI  159 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~-~~  159 (327)
                      +||.+++.......... +.+..|+...+.+.+.+.+..+-.+++.+|-..-.         +++-.      .... -+
T Consensus        79 vVii~ag~~~k~g~~R~-dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~---------~t~~~------~k~s~~p  142 (326)
T 2zqz_A           79 LVVITAGAPQKPGETRL-DLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDI---------LTYAT------WKLSGFP  142 (326)
T ss_dssp             EEEECCCCC-----CHH-HHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHH---------HHHHH------HHHHCCC
T ss_pred             EEEEcCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcHHH---------HHHHH------HHHcCCC
Confidence            99999986443333333 77899999999999999988755677766532110         00000      0000 01


Q ss_pred             CchhhHh-hhHHHHHHHHHHHHHcCCcEEEEecCceecCC
Q 020334          160 WGKSYVL-TKTLTERAALEFAEEHGLDLVTLIPSFVVGPF  198 (327)
Q Consensus       160 ~~~~Y~~-sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~  198 (327)
                      +....|. +-...-++....++..|++..-++ ..++|..
T Consensus       143 ~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~-~~v~G~H  181 (326)
T 2zqz_A          143 KNRVVGSGTSLDTARFRQSIAEMVNVDARSVH-AYIMGEH  181 (326)
T ss_dssp             GGGEEECTTHHHHHHHHHHHHHHHTCCGGGEE-CCEEBSS
T ss_pred             HHHEEEccccchHHHHHHHHHHHhCCChhheE-EEEeccc
Confidence            1223344 334444555556666677666666 6788864

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.96  E-value=4.6e-05  Score=65.45  Aligned_cols=171  Identities=16%  Similarity=0.076  Sum_probs=100.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      .+||.|+|+ |.+|+.++..|+.+|.  +|..+++ +...... ...+.+...-......+..+  |.+    .++++|+
T Consensus        19 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di-~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~~----~~~~aDi   90 (331)
T 4aj2_A           19 QNKITVVGV-GAVGMACAISILMKDLADELALVDV-IEDKLKGEMMDLQHGSLFLKTPKIVSSK--DYS----VTANSKL   90 (331)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-CHHHHHHHHHHHHHTGGGCSCCEEEECS--SGG----GGTTEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeC-ChHHHHHHHHhhhhhhhccCCCeEEEcC--CHH----HhCCCCE
Confidence            578999997 9999999999999886  8999988 4322221 11121110000111222221  222    3778999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhc-CCC
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKL-DIW  160 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~-~~~  160 (327)
                      ||.+||.......... +.+..|+...+.+.+.+.+..+...++.+|-..-.         +++-.      .... -++
T Consensus        91 Vvi~aG~~~kpG~tR~-dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvdi---------~t~~~------~k~sg~p~  154 (331)
T 4aj2_A           91 VIITAGARQQEGESRL-NLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPVDI---------LTYVA------WKISGFPK  154 (331)
T ss_dssp             EEECCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHH---------HHHHH------HHHHCCCG
T ss_pred             EEEccCCCCCCCccHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHHH---------HHHHH------HHHhCCCH
Confidence            9999986544344444 78999999999999999998755677776642100         00000      0000 011


Q ss_pred             chhhHh-hhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          161 GKSYVL-TKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       161 ~~~Y~~-sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                      ....|. +-+..-++....++..+++..-++. .|+|....
T Consensus       155 ~rviG~gt~LD~~R~~~~la~~lgv~~~~V~~-~ViGeHG~  194 (331)
T 4aj2_A          155 NRVIGSGCNLDSARFRYLMGERLGVHPLSCHG-WVLGEHGD  194 (331)
T ss_dssp             GGEEECTTHHHHHHHHHHHHHHHTSCGGGCBC-CEEBCSST
T ss_pred             HHEEeeccccHHHHHHHHHHHHhCCCHHHCEE-eEEecCCC
Confidence            222344 3444455555566666776665665 47887643

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.95  E-value=1.9e-05  Score=67.41  Aligned_cols=115  Identities=10%  Similarity=0.041  Sum_probs=73.2

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcch-hhhhhCCC-CCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKD-LSFLTNLP-GASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      |||.|+|+ |.+|+.++..|+..|.  +|..+++ ++..... ...+.+.. ......+....|  +    .+.++++|+
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~-~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDv   72 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDI-KDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDV   72 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECS-STTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-chHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCE
Confidence            57999996 9999999999998876  8999999 4433221 11111100 000122332111  1    235778999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      ||.+||.......... +.+..|+...+.+.+.+.+..+...++.+|-
T Consensus        73 Vii~ag~~~kpG~~R~-dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           73 CIITAGLPRSPGMSRD-DLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             EEECCCC-------CH-HHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred             EEECCCCCCCCCCCHH-HHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence            9999986543333344 7889999999999999999875566776663

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.95  E-value=2.3e-05  Score=67.23  Aligned_cols=168  Identities=14%  Similarity=0.143  Sum_probs=95.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      ++||.|+|| |.+|+.++..|+..+.  +|..+++ +.++... ...+.+.......+++.. |  +    .+.++++|+
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di-~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv   75 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDV-VKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADL   75 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeC-CchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCE
Confidence            468999998 9999999999998775  8999988 4332221 222221110012333332 2  2    234788999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhc-CCC
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKL-DIW  160 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~-~~~  160 (327)
                      ||.+++.......... +.+..|+...+.+.+.+.+..+-.+++.+|-..-.         +++-.      .... -++
T Consensus        76 Vii~ag~~~~~g~~R~-dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~---------~t~~~------~k~s~~p~  139 (318)
T 1ez4_A           76 VVITAGAPQKPGESRL-DLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDI---------LTYAT------WKFSGFPK  139 (318)
T ss_dssp             EEECCCC-----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHH---------HHHHH------HHHHCCCG
T ss_pred             EEECCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHHH---------HHHHH------HHHcCCCH
Confidence            9999986443223333 67889999999999999998756677766532110         00000      0000 011


Q ss_pred             chhhHh-hhHHHHHHHHHHHHHcCCcEEEEecCceecCC
Q 020334          161 GKSYVL-TKTLTERAALEFAEEHGLDLVTLIPSFVVGPF  198 (327)
Q Consensus       161 ~~~Y~~-sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~  198 (327)
                      ....|. +-...-++....++..|++..-++ ..++|..
T Consensus       140 ~rviG~gt~LD~~R~~~~la~~lgv~~~~v~-~~v~G~H  177 (318)
T 1ez4_A          140 ERVIGSGTSLDSSRLRVALGKQFNVDPRSVD-AYIMGEH  177 (318)
T ss_dssp             GGEEECTTHHHHHHHHHHHHHHHTCCGGGEE-CCEESSS
T ss_pred             HHEEeccccchHHHHHHHHHHHhCcChhHEE-EEEeccc
Confidence            223344 334444555555666677666666 6788864

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.95  E-value=9.4e-06  Score=66.58  Aligned_cols=71  Identities=15%  Similarity=0.114  Sum_probs=56.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi   83 (327)
                      .++|+|+|+ |.+|+.+++.|.+.|+ |+++++ ++....   .+.      .++.++.+|.+|++.+.++ +.++|.||
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~-~~~~~~---~~~------~~~~~i~gd~~~~~~l~~a~i~~ad~vi   76 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAED-ENVRKK---VLR------SGANFVHGDPTRVSDLEKANVRGARAVI   76 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESC-GGGHHH---HHH------TTCEEEESCTTCHHHHHHTTCTTCSEEE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEEC-CHHHHH---HHh------cCCeEEEcCCCCHHHHHhcCcchhcEEE
Confidence            568999997 9999999999999999 999988 443322   222      2578999999999998876 78999999


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      .+.+
T Consensus        77 ~~~~   80 (234)
T 2aef_A           77 VDLE   80 (234)
T ss_dssp             ECCS
T ss_pred             EcCC
Confidence            7754

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.85  E-value=9.6e-05  Score=63.10  Aligned_cols=114  Identities=14%  Similarity=0.142  Sum_probs=77.2

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      +||.|+|| |.+|+.++..|+..+  .+|..+++ +.++... ...+.+.......+++.. +  +.    +.++++|+|
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di-~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~----~a~~~aD~V   71 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDL-DRKLAQAHAEDILHATPFAHPVWVWA-G--SY----GDLEGARAV   71 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-SHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG----GGGTTEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-ChhHHHHHHHHHHHhHhhcCCeEEEE-C--CH----HHhCCCCEE
Confidence            57999998 999999999999886  68999998 4332221 222222110012333333 2  22    247889999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      |.+++.......... +.+..|+...+.+.+.+.+..+..+++.+|-
T Consensus        72 ii~ag~~~~~g~~r~-dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (310)
T 2xxj_A           72 VLAAGVAQRPGETRL-QLLDRNAQVFAQVVPRVLEAAPEAVLLVATN  117 (310)
T ss_dssp             EECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EECCCCCCCCCcCHH-HHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            999986543333444 7789999999999999999875567776653

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.84  E-value=5.8e-05  Score=65.44  Aligned_cols=98  Identities=13%  Similarity=0.152  Sum_probs=58.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-----C-eEEEEEcCCCCCcchhhhhh-CCCCCCCCeEEEeCCCCChhHHHHHhc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-----Y-FVTTTVRSDPEHKKDLSFLT-NLPGASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-----~-~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      |+||+|.||||++|+.|++.|.+++     + +|.++.++.. ..+.+.... .... ...+.+  .|+ +++    .+.
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~-agk~~~~~~~~l~~-~~~~~~--~~~-~~~----~~~   79 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATS-AGSTLGEHHPHLTP-LAHRVV--EPT-EAA----VLG   79 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSC-TTSBGGGTCTTCGG-GTTCBC--EEC-CHH----HHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCc-CCCchhhhcccccc-cceeee--ccC-CHH----Hhc
Confidence            4689999999999999999999887     3 7777764221 111111110 0000 001121  122 222    245


Q ss_pred             CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce
Q 020334           78 GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS  131 (327)
Q Consensus        78 ~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~  131 (327)
                      ++|+||.|.+...                 +..++..+ +.+  .++|-+|+..
T Consensus        80 ~~DvVf~alg~~~-----------------s~~~~~~~-~~G--~~vIDlSa~~  113 (352)
T 2nqt_A           80 GHDAVFLALPHGH-----------------SAVLAQQL-SPE--TLIIDCGADF  113 (352)
T ss_dssp             TCSEEEECCTTSC-----------------CHHHHHHS-CTT--SEEEECSSTT
T ss_pred             CCCEEEECCCCcc-----------------hHHHHHHH-hCC--CEEEEECCCc
Confidence            8999998887421                 23556666 666  5788888875

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.84  E-value=6.8e-05  Score=63.92  Aligned_cols=166  Identities=17%  Similarity=0.156  Sum_probs=90.1

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      |||.|+|| |.+|+.++..|+..|+  +|..+++ ++..... ...+..........+...   .+.    +.++++|+|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~-~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~----~a~~~aDvV   71 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDR-DEDRAQAEAEDIAHAAPVSHGTRVWH---GGH----SELADAQVV   71 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-SHHHHHHHHHHHTTSCCTTSCCEEEE---ECG----GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-CHHHHHHHHHhhhhhhhhcCCeEEEE---CCH----HHhCCCCEE
Confidence            47999998 9999999999999998  9999999 4332221 112211110011223222   122    247789999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      |.+++.......... +.+..|+...+.+++.+.+..+...++.+|-..-..     ...+.+.           .+|..
T Consensus        72 Ii~~~~~~~~g~~r~-dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~-----~~~~~~~-----------~~~~r  134 (304)
T 2v6b_A           72 ILTAGANQKPGESRL-DLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLL-----TDLATQL-----------APGQP  134 (304)
T ss_dssp             EECC-------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHH-----HHHHHHH-----------SCSSC
T ss_pred             EEcCCCCCCCCCcHH-HHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHH-----HHHHHHh-----------CChhc
Confidence            999975432222333 667889999999999998876344555544321000     0000000           01122


Q ss_pred             hhHh-hhHHHHHHHHHHHHHcCCcEEEEecCceecCC
Q 020334          163 SYVL-TKTLTERAALEFAEEHGLDLVTLIPSFVVGPF  198 (327)
Q Consensus       163 ~Y~~-sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~  198 (327)
                      ..|. +-....++...+++..|++..-++. .+.|..
T Consensus       135 viG~gt~Ld~~r~~~~la~~l~v~~~~v~~-~v~G~H  170 (304)
T 2v6b_A          135 VIGSGTVLDSARFRHLMAQHAGVDGTHAHG-YVLGEH  170 (304)
T ss_dssp             EEECTTHHHHHHHHHHHHHHHTSCGGGEEC-CEEESS
T ss_pred             EEeCCcCchHHHHHHHHHHHhCcCHHHceE-EEecCC
Confidence            2333 3334445555566666776556666 677765

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.83  E-value=7.9e-06  Score=65.92  Aligned_cols=73  Identities=21%  Similarity=0.227  Sum_probs=48.1

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      |+|+|+||+|++|+++++.|++.|++|++++| +++....+......     .+.  ..|+. ..++.+.++++|+||++
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~-----~~~--~~~~~-~~~~~~~~~~~D~Vi~~   71 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSR-REEKAEAKAAEYRR-----IAG--DASIT-GMKNEDAAEACDIAVLT   71 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEES-SHHHHHHHHHHHHH-----HHS--SCCEE-EEEHHHHHHHCSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHhcc-----ccc--cCCCC-hhhHHHHHhcCCEEEEe
Confidence            47999999999999999999999999999999 44332222110000     000  01222 23355667789999998


Q ss_pred             cC
Q 020334           86 AA   87 (327)
Q Consensus        86 a~   87 (327)
                      ..
T Consensus        72 ~~   73 (212)
T 1jay_A           72 IP   73 (212)
T ss_dssp             SC
T ss_pred             CC
Confidence            75

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.82  E-value=6.7e-05  Score=64.19  Aligned_cols=115  Identities=18%  Similarity=0.071  Sum_probs=76.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEE-eCCCCChhHHHHHhcCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKD-LSFLTNLPGASERLQIF-NADLNDPESFDAAIAGCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~d   80 (327)
                      .+||.|+|+ |.+|+.++..|+..|.  +|..+++ +.+.... ...+.+........... ..|..       .++++|
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di-~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~-------~~~daD   91 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDV-MEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS-------VSAGSK   91 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECS-CHHHHHHHHHHHHHHGGGSCCSEEEEESSSC-------SCSSCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEEC-CHHHHHHHHHHhhhhhhcccCCeEEEcCCHH-------HhCCCC
Confidence            578999998 9999999999999886  8999988 4332221 11111100000111222 34432       167899


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      +||-+||.......... +.+..|+...+.+.+.+.+..+...++.+|-
T Consensus        92 iVIitaG~p~kpG~tR~-dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           92 LVVITAGARQQEGESRL-NLVQRNVNIFKFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             EEEECCSCCCCSSCCTT-GGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEEEeCCCCCCCCCCHH-HHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence            99999986543334444 7789999999999999998875566776664

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.80  E-value=9.6e-05  Score=63.36  Aligned_cols=118  Identities=17%  Similarity=0.226  Sum_probs=75.2

Q ss_pred             CCC-CCCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcch-hhhhhCC-CCCCCCeEEEeCCCCChhHHHHH
Q 020334            1 MEE-QKGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKD-LSFLTNL-PGASERLQIFNADLNDPESFDAA   75 (327)
Q Consensus         1 m~~-~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~   75 (327)
                      |.. +++||.|+|+ |.+|+.++..|+..|.  +|.++++ +++.... ...+.+. ......+++...   +.    +.
T Consensus         1 m~~~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di-~~~~~~~~~~dl~~~~~~~~~~~~i~~~---~~----~a   71 (316)
T 1ldn_A            1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDA-NESKAIGDAMDFNHGKVFAPKPVDIWHG---DY----DD   71 (316)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHHHTTSSSSCCEEEEC---CG----GG
T ss_pred             CCCCCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeC-CcchHHHHHhhHHHHhhhcCCCeEEEcC---cH----HH
Confidence            554 3469999998 9999999999988764  8999999 4322221 1122111 111113333321   22    34


Q ss_pred             hcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           76 IAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        76 ~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      ++++|+||-+++.......... +.+..|......+++.+.+..+...++.+|
T Consensus        72 l~~aDvViia~~~~~~~g~~r~-dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t  123 (316)
T 1ldn_A           72 CRDADLVVICAGANQKPGETRL-DLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (316)
T ss_dssp             TTTCSEEEECCSCCCCTTTCSG-GGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             hCCCCEEEEcCCCCCCCCCCHH-HHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence            7789999999976543333333 567889999999999998876444555554

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.78  E-value=9.4e-05  Score=63.96  Aligned_cols=94  Identities=16%  Similarity=0.149  Sum_probs=55.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC---eEEEEE-cCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY---FVTTTV-RSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGC   79 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~   79 (327)
                      |+++|+|.||||++|+.+++.|.++++   ++.++. +++......   +       .+......|. +++.    +.++
T Consensus         5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~---~-------~g~~i~~~~~-~~~~----~~~~   69 (340)
T 2hjs_A            5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG---F-------AESSLRVGDV-DSFD----FSSV   69 (340)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE---E-------TTEEEECEEG-GGCC----GGGC
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc---c-------CCcceEEecC-CHHH----hcCC
Confidence            346899999999999999999997654   455554 212211110   0       1111111122 2221    4579


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS  131 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~  131 (327)
                      |+||.|.+..                 ....++..+.+.+ + ++|-+|+..
T Consensus        70 DvV~~a~g~~-----------------~s~~~a~~~~~aG-~-kvId~Sa~~  102 (340)
T 2hjs_A           70 GLAFFAAAAE-----------------VSRAHAERARAAG-C-SVIDLSGAL  102 (340)
T ss_dssp             SEEEECSCHH-----------------HHHHHHHHHHHTT-C-EEEETTCTT
T ss_pred             CEEEEcCCcH-----------------HHHHHHHHHHHCC-C-EEEEeCCCC
Confidence            9999887621                 1356666677777 4 578888754

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.77  E-value=0.00013  Score=64.95  Aligned_cols=73  Identities=22%  Similarity=0.279  Sum_probs=59.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi   83 (327)
                      .++|+|+|+ |-+|+.+++.|.+.|++|+++++ ++.....+.   .     .++..+.||.++++.+.++ +.++|+||
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~-d~~~v~~~~---~-----~g~~vi~GDat~~~~L~~agi~~A~~vi   73 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDH-DPDHIETLR---K-----FGMKVFYGDATRMDLLESAGAAKAEVLI   73 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEEC-CHHHHHHHH---H-----TTCCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEEC-CHHHHHHHH---h-----CCCeEEEcCCCCHHHHHhcCCCccCEEE
Confidence            467999996 99999999999999999999999 544333322   1     3677899999999999876 67899998


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      -+..
T Consensus        74 v~~~   77 (413)
T 3l9w_A           74 NAID   77 (413)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            7764

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.77  E-value=2.9e-05  Score=68.24  Aligned_cols=103  Identities=15%  Similarity=0.043  Sum_probs=66.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      .++|+|+|+ |.+|..+++.|...|++|++++| ++.....+....     ...   +..|..+.+.+.+++.++|+||+
T Consensus       166 ~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~-~~~~~~~~~~~~-----g~~---~~~~~~~~~~l~~~~~~~DvVi~  235 (369)
T 2eez_A          166 PASVVILGG-GTVGTNAAKIALGMGAQVTILDV-NHKRLQYLDDVF-----GGR---VITLTATEANIKKSVQHADLLIG  235 (369)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHT-----TTS---EEEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEEC-CHHHHHHHHHhc-----Cce---EEEecCCHHHHHHHHhCCCEEEE
Confidence            578999999 99999999999999999999999 443322222111     011   34567778888888889999999


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccc
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSG  130 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~  130 (327)
                      +++.......          .......++.+++   ...+|.+|+.
T Consensus       236 ~~g~~~~~~~----------~li~~~~l~~mk~---gg~iV~v~~~  268 (369)
T 2eez_A          236 AVLVPGAKAP----------KLVTRDMLSLMKE---GAVIVDVAVD  268 (369)
T ss_dssp             CCC-----------------CCSCHHHHTTSCT---TCEEEECC--
T ss_pred             CCCCCccccc----------hhHHHHHHHhhcC---CCEEEEEecC
Confidence            9985321000          0012334444543   2578988864

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.76  E-value=0.00022  Score=61.25  Aligned_cols=172  Identities=15%  Similarity=0.044  Sum_probs=95.5

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchh-hhhhCC---CCCCCCeEEEeCCCCChhHHHHH
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDL-SFLTNL---PGASERLQIFNADLNDPESFDAA   75 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~   75 (327)
                      |.. ++||.|+|| |.+|+.++..|+..|+ +|..+++ +++..... ..+...   .....+++.. .|      + +.
T Consensus         1 m~~-~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di-~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~a   69 (322)
T 1t2d_A            1 MAP-KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDI-VKNMPHGKALDTSHTNVMAYSNCKVSGS-NT------Y-DD   69 (322)
T ss_dssp             -CC-CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECS-SSSHHHHHHHHHHTHHHHHTCCCCEEEE-CC------G-GG
T ss_pred             CCC-CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHHHhhhhhcCCCcEEEEC-CC------H-HH
Confidence            443 468999998 9999999999999998 8888888 44333221 111110   0001122211 22      2 34


Q ss_pred             hcCCCEEEEccCCCCCCCCc-----hHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           76 IAGCAGVIHVAAPIDIDGKE-----TEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        76 ~~~~d~vih~a~~~~~~~~~-----~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                      ++++|+||-+++........     .. +....|+...+.+.+.+.+..+-..++.+|-..-.         .++-.   
T Consensus        70 l~~aD~Vi~a~g~p~k~g~~~qe~~r~-dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~---------~t~~~---  136 (322)
T 1t2d_A           70 LAGADVVIVTAGFTKAPGKSDKEWNRD-DLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDV---------MVQLL---  136 (322)
T ss_dssp             GTTCSEEEECCSCSSCTTCCSTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHH---------HHHHH---
T ss_pred             hCCCCEEEEeCCCCCCCCCCcccccHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHH---------HHHHH---
Confidence            77899999999754321111     22 56788888999999998887644466655432110         00000   


Q ss_pred             hhHhhhcCCCchhhHh-hhHHHHHHHHHHHHHcCCcEEEEecCceecCCC
Q 020334          151 EDYIRKLDIWGKSYVL-TKTLTERAALEFAEEHGLDLVTLIPSFVVGPFI  199 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~-sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~  199 (327)
                       .... .-+|....|. +-...-++....++..|++..-++.. ++|...
T Consensus       137 -~~~~-g~~~~rviG~gt~ld~~R~~~~la~~lgv~~~~v~~~-v~G~HG  183 (322)
T 1t2d_A          137 -HQHS-GVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAH-IVGAHG  183 (322)
T ss_dssp             -HHHH-CCCGGGEEECCHHHHHHHHHHHHHHHHTSCGGGEECC-EEBCSS
T ss_pred             -HHhc-CCChHHEEeccCcccHHHHHHHHHHHhCCCHHHeEEE-EEcCCC
Confidence             0000 0022233444 44444445555566667765556554 888643

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.76  E-value=7.8e-05  Score=62.87  Aligned_cols=114  Identities=14%  Similarity=0.110  Sum_probs=75.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCc-chhhhhhCC-CCCCCCeEEEe-CCCCChhHHHHHhcCCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHK-KDLSFLTNL-PGASERLQIFN-ADLNDPESFDAAIAGCA   80 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~~~~-~~~~~~~~~~~-~D~~d~~~~~~~~~~~d   80 (327)
                      |||.|+|| |+||+.++..|+.++  .++..++. .+... .....+.+. +.......... .|.   +    .++++|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di-~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~---~----~~~~aD   71 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDI-AEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---S----LLKGSE   71 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECS-SHHHHHHHHHHHHHHHGGGTCCCEEEEESCG---G----GGTTCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeC-CCCcchhhhhhhhcccccCCCCCeEecCCCH---H----HhCCCC
Confidence            57999995 999999999998776  47888888 43211 111111110 00011222222 232   2    467899


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      +||-+||...-...... +.+..|....+.+.+.+.++.+...++.+|-
T Consensus        72 vVvitAG~prkpGmtR~-dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           72 IIVVTAGLARKPGMTRL-DLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EEEECCCCCCCSSSCHH-HHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EEEEecCCCCCCCCchH-HHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence            99999997654445555 8899999999999999999875556666663

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.75  E-value=4.9e-05  Score=66.20  Aligned_cols=73  Identities=21%  Similarity=0.268  Sum_probs=50.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHh----c-CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAI----A-GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~----~-~~   79 (327)
                      .++|||+||+|.+|..+++.+...|++|++++| ++.+......+        +... ..|..+.+++.+.+    . ++
T Consensus       170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~-~~~~~~~~~~~--------g~~~-~~d~~~~~~~~~~~~~~~~~~~  239 (347)
T 2hcy_A          170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDG-GEGKEELFRSI--------GGEV-FIDFTKEKDIVGAVLKATDGGA  239 (347)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-STTHHHHHHHT--------TCCE-EEETTTCSCHHHHHHHHHTSCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcC-CHHHHHHHHHc--------CCce-EEecCccHhHHHHHHHHhCCCC
Confidence            578999999999999999999999999999998 44433333221        1111 13655433333322    2 68


Q ss_pred             CEEEEccC
Q 020334           80 AGVIHVAA   87 (327)
Q Consensus        80 d~vih~a~   87 (327)
                      |+||++++
T Consensus       240 D~vi~~~g  247 (347)
T 2hcy_A          240 HGVINVSV  247 (347)
T ss_dssp             EEEEECSS
T ss_pred             CEEEECCC
Confidence            99999987

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.73  E-value=4.9e-05  Score=64.81  Aligned_cols=82  Identities=12%  Similarity=0.084  Sum_probs=55.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ..+++||+|+ |.+|++++..|++.|. +|++++| +++...+...+...............++.+.+.+.+.+.++|+|
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR-~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiI  230 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNR-KDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIF  230 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEEC-SSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEEC-CCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEE
Confidence            3689999997 8999999999999998 8999999 42212222222100000012233345666767788888899999


Q ss_pred             EEccC
Q 020334           83 IHVAA   87 (327)
Q Consensus        83 ih~a~   87 (327)
                      |++..
T Consensus       231 INaTp  235 (315)
T 3tnl_A          231 TNATG  235 (315)
T ss_dssp             EECSS
T ss_pred             EECcc
Confidence            98874

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.72  E-value=0.0002  Score=61.68  Aligned_cols=114  Identities=13%  Similarity=0.022  Sum_probs=72.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchh-hhhhC---CCCCCCCeEEEeCCCCChhHHHHHhcC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDL-SFLTN---LPGASERLQIFNADLNDPESFDAAIAG   78 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~~~~~~~D~~d~~~~~~~~~~   78 (327)
                      |++||.|+|| |.+|+.++..|+..|+ +|...++ +++..... ..+..   ......+++.. .|      + +.+++
T Consensus        13 ~~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di-~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~al~~   82 (328)
T 2hjr_A           13 MRKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDI-IEGVPQGKALDLNHCMALIGSPAKIFGE-NN------Y-EYLQN   82 (328)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECS-STTHHHHHHHHHHHHHHHHTCCCCEEEE-SC------G-GGGTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEEC-CHHHHHHHHHHHHhHhhccCCCCEEEEC-CC------H-HHHCC
Confidence            3468999998 9999999999999998 9999999 44333321 11111   00001223321 22      2 34778


Q ss_pred             CCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           79 CAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        79 ~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      +|+||-+++.......... +....|+...+.+.+.+.+..+...++.+|
T Consensus        83 aD~VI~avg~p~k~g~tr~-dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           83 SDVVIITAGVPRKPNMTRS-DLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             CSEEEECCSCCCCTTCCSG-GGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCEEEEcCCCCCCCCCchh-hHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999999875432222222 556788888999999888876344555554

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.71  E-value=0.00036  Score=59.63  Aligned_cols=114  Identities=15%  Similarity=0.053  Sum_probs=72.8

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHC--CCeEEEEEcCCCCCcchhh-hhhCCCC-CCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDH--GYFVTTTVRSDPEHKKDLS-FLTNLPG-ASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~-~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      |||.|+|+ |.+|+.++..|+..  |++|.++++ ++....... .+..... ......+...  .|.   ++ ++++|+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~-~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~---~~-l~~aDv   72 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDV-VEGIPQGKALDMYESGPVGLFDTKVTGS--NDY---AD-TANSDI   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-SSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG---GG-GTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-ChhHHHHHHHhHHhhhhcccCCcEEEEC--CCH---HH-HCCCCE
Confidence            47999998 99999999999985  799999999 544333221 1111000 0011111110  222   22 678999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      ||-+++.......... +.+..|+.....+++.+.+..+...++.+|
T Consensus        73 Viiav~~p~~~g~~r~-dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           73 VIITAGLPRKPGMTRE-DLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             EEECCSCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            9999975332222233 778899999999999998876445666654

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.68  E-value=4.5e-05  Score=66.02  Aligned_cols=73  Identities=16%  Similarity=0.115  Sum_probs=49.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHH----Hhc-CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDA----AIA-GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~----~~~-~~   79 (327)
                      +++|||+||+|.||..+++.+...|++|++++| ++.+......+        +.. ...|..+.+++.+    +.. ++
T Consensus       146 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~-~~~~~~~~~~~--------g~~-~~~d~~~~~~~~~~~~~~~~~~~  215 (333)
T 1v3u_A          146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG-SDEKIAYLKQI--------GFD-AAFNYKTVNSLEEALKKASPDGY  215 (333)
T ss_dssp             SCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHT--------TCS-EEEETTSCSCHHHHHHHHCTTCE
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHhc--------CCc-EEEecCCHHHHHHHHHHHhCCCC
Confidence            578999999999999999999999999999998 43333222221        111 1235555222322    222 58


Q ss_pred             CEEEEccC
Q 020334           80 AGVIHVAA   87 (327)
Q Consensus        80 d~vih~a~   87 (327)
                      |+||+++|
T Consensus       216 d~vi~~~g  223 (333)
T 1v3u_A          216 DCYFDNVG  223 (333)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999998

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.68  E-value=0.00013  Score=63.66  Aligned_cols=73  Identities=16%  Similarity=0.074  Sum_probs=50.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChh---HHHHHhc--CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPE---SFDAAIA--GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~~   79 (327)
                      .++|||+||+|.+|..+++.+...|++|++++| ++.+......+        +... ..|..+.+   .+.+...  ++
T Consensus       171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~~--------ga~~-~~d~~~~~~~~~~~~~~~~~~~  240 (351)
T 1yb5_A          171 GESVLVHGASGGVGLAACQIARAYGLKILGTAG-TEEGQKIVLQN--------GAHE-VFNHREVNYIDKIKKYVGEKGI  240 (351)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHT--------TCSE-EEETTSTTHHHHHHHHHCTTCE
T ss_pred             cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHc--------CCCE-EEeCCCchHHHHHHHHcCCCCc
Confidence            578999999999999999999999999999998 44333322221        1111 13444433   2333333  68


Q ss_pred             CEEEEccC
Q 020334           80 AGVIHVAA   87 (327)
Q Consensus        80 d~vih~a~   87 (327)
                      |+||+|+|
T Consensus       241 D~vi~~~G  248 (351)
T 1yb5_A          241 DIIIEMLA  248 (351)
T ss_dssp             EEEEESCH
T ss_pred             EEEEECCC
Confidence            99999997

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.67  E-value=0.00067  Score=58.95  Aligned_cols=173  Identities=12%  Similarity=-0.005  Sum_probs=100.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-----eEEEEEcCCCCC----cchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-----FVTTTVRSDPEH----KKDLSFLTNLPGASERLQIFNADLNDPESFDAA   75 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-----~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~   75 (327)
                      +.||.|+||+|+||++++-.|+..+.     .|...+.+.+..    ......+.+...  +-...+..  .+  ...+.
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~--p~~~~v~i--~~--~~y~~  105 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY--PLLREVSI--GI--DPYEV  105 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC--TTEEEEEE--ES--CHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhh--hhcCCcEE--ec--CCHHH
Confidence            46899999999999999999988752     265555422221    111122222110  11111111  11  12456


Q ss_pred             hcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhc-CCccEEEEeccce---eeeecCCCCCcccCCCCCCh
Q 020334           76 IAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKS-GTVKRFVYTSSGS---TVYFSGKDVDMLDETFWSDE  151 (327)
Q Consensus        76 ~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~---v~~~~~~~~~~~~E~~~~~~  151 (327)
                      ++++|+||-+||...-...... +.++.|+...+.+.+.+.+. ++...++.+|...   +|-.       ......   
T Consensus       106 ~~daDvVVitag~prkpG~tR~-DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~ia-------~k~sg~---  174 (375)
T 7mdh_A          106 FEDVDWALLIGAKPRGPGMERA-ALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALIC-------LKNAPD---  174 (375)
T ss_dssp             TTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH-------HHTCTT---
T ss_pred             hCCCCEEEEcCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHHHH-------HHHcCC---
Confidence            8899999999986543444444 88999999999999999986 4455677766421   0100       000000   


Q ss_pred             hHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 020334          152 DYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       152 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~  200 (327)
                            .++...-+.+-+..-++-...+++.|++..-++-..|+|....
T Consensus       175 ------~~~rvig~gT~LDsaR~r~~lA~~lgv~~~~V~~v~V~GeHgd  217 (375)
T 7mdh_A          175 ------IPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST  217 (375)
T ss_dssp             ------SCGGGEEECCHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSST
T ss_pred             ------CCccEEEeeehHHHHHHHHHHHHHhCcChhhcccceEEecCCC
Confidence                  1112233445555666666667777876666665468887543

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.65  E-value=0.00014  Score=63.55  Aligned_cols=74  Identities=11%  Similarity=-0.002  Sum_probs=50.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChh---HHHHHhc--CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPE---SFDAAIA--GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~~   79 (327)
                      +++|||+||+|.||..+++.+...|++|++++| ++.+...+..+.      .. ..  .|..+.+   .+.+...  ++
T Consensus       163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~~g------~~-~~--~~~~~~~~~~~~~~~~~~~~~  232 (354)
T 2j8z_A          163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG-SQKKLQMAEKLG------AA-AG--FNYKKEDFSEATLKFTKGAGV  232 (354)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHT------CS-EE--EETTTSCHHHHHHHHTTTSCE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHcC------Cc-EE--EecCChHHHHHHHHHhcCCCc
Confidence            578999999999999999999999999999999 443333332221      11 12  3444433   3333332  58


Q ss_pred             CEEEEccCC
Q 020334           80 AGVIHVAAP   88 (327)
Q Consensus        80 d~vih~a~~   88 (327)
                      |+||+|+|.
T Consensus       233 d~vi~~~G~  241 (354)
T 2j8z_A          233 NLILDCIGG  241 (354)
T ss_dssp             EEEEESSCG
T ss_pred             eEEEECCCc
Confidence            999999983

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.64  E-value=4.1e-05  Score=64.76  Aligned_cols=70  Identities=19%  Similarity=0.237  Sum_probs=48.9

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      |..|||+|.|+|+||.+|+.+++.|.+.|++|++.+| ++.....+..   .     ++.     ..+   ..+.++++|
T Consensus         7 ~~~mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~---~-----g~~-----~~~---~~~~~~~aD   69 (286)
T 3c24_A            7 NDVGPKTVAILGAGGKMGARITRKIHDSAHHLAAIEI-APEGRDRLQG---M-----GIP-----LTD---GDGWIDEAD   69 (286)
T ss_dssp             CSCCCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECC-SHHHHHHHHH---T-----TCC-----CCC---SSGGGGTCS
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEC-CHHHHHHHHh---c-----CCC-----cCC---HHHHhcCCC
Confidence            4556679999999999999999999999999999988 4333222221   1     111     122   223566899


Q ss_pred             EEEEccC
Q 020334           81 GVIHVAA   87 (327)
Q Consensus        81 ~vih~a~   87 (327)
                      +||-+..
T Consensus        70 vVi~av~   76 (286)
T 3c24_A           70 VVVLALP   76 (286)
T ss_dssp             EEEECSC
T ss_pred             EEEEcCC
Confidence            9997764

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.63  E-value=6.1e-05  Score=67.79  Aligned_cols=36  Identities=19%  Similarity=0.219  Sum_probs=31.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH   42 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   42 (327)
                      +|+|.|+|+ |++|..++..|++.|++|++++| ++..
T Consensus         2 ~mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~-~~~~   37 (450)
T 3gg2_A            2 SLDIAVVGI-GYVGLVSATCFAELGANVRCIDT-DRNK   37 (450)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-CHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhcCCEEEEEEC-CHHH
Confidence            468999994 99999999999999999999999 5433

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.63  E-value=0.00019  Score=61.54  Aligned_cols=117  Identities=15%  Similarity=0.072  Sum_probs=73.6

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchh-hhhhCC---CCCCCCeEEEeCCCCChhHHHHH
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDL-SFLTNL---PGASERLQIFNADLNDPESFDAA   75 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~~~~---~~~~~~~~~~~~D~~d~~~~~~~   75 (327)
                      |. ++++|.|+|+ |.+|+.++..|+..|+ +|.++++ +++..... ..+...   .....++... .|      + +.
T Consensus         1 M~-~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~-~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~a   69 (317)
T 2ewd_A            1 MI-ERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDI-AEGIPQGKALDITHSMVMFGSTSKVIGT-DD------Y-AD   69 (317)
T ss_dssp             CC-CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECS-SSSHHHHHHHHHHHHHHHHTCCCCEEEE-SC------G-GG
T ss_pred             CC-CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeC-CchHHHHHHHHHHhhhhhcCCCcEEEEC-CC------H-HH
Confidence            55 3568999997 9999999999999998 9999999 44333221 011000   0001122211 22      2 34


Q ss_pred             hcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           76 IAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        76 ~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      ++++|+||-+++.......... +....|....+.+++.+.+..+-..++.+|.
T Consensus        70 ~~~aDiVi~avg~p~~~g~~r~-d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           70 ISGSDVVIITASIPGRPKDDRS-ELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             GTTCSEEEECCCCSSCCSSCGG-GGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             hCCCCEEEEeCCCCCCCCCcHH-HHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            6789999999975443323333 5567788888888888887764445665554

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.62  E-value=0.00019  Score=62.21  Aligned_cols=98  Identities=13%  Similarity=0.090  Sum_probs=58.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      |+||.|.||||++|+.+++.|.+.+ .++.++.+ .......+.......   .+..  ...+.+.+   + +.++|+|+
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s-~~~~g~~~~~~~~~~---~g~~--~~~~~~~~---~-~~~vDvV~   73 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTS-RRFAGEPVHFVHPNL---RGRT--NLKFVPPE---K-LEPADILV   73 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBC-STTTTSBGGGTCGGG---TTTC--CCBCBCGG---G-CCCCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEEC-chhhCchhHHhCchh---cCcc--cccccchh---H-hcCCCEEE
Confidence            4789999999999999999999775 47777766 222222222110000   0000  01122222   2 46899999


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS  131 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~  131 (327)
                      .|.+...                 ...++..+.+.|  +++|-.|+..
T Consensus        74 ~a~g~~~-----------------s~~~a~~~~~aG--~~VId~Sa~~  102 (345)
T 2ozp_A           74 LALPHGV-----------------FAREFDRYSALA--PVLVDLSADF  102 (345)
T ss_dssp             ECCCTTH-----------------HHHTHHHHHTTC--SEEEECSSTT
T ss_pred             EcCCcHH-----------------HHHHHHHHHHCC--CEEEEcCccc
Confidence            8886321                 345555666666  5688888753

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.60  E-value=0.00035  Score=57.68  Aligned_cols=105  Identities=17%  Similarity=0.114  Sum_probs=64.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCC------------------CCcchh-hhhhCCCCCCCCeEEEeC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDP------------------EHKKDL-SFLTNLPGASERLQIFNA   64 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~------------------~~~~~~-~~~~~~~~~~~~~~~~~~   64 (327)
                      .++|+|+|+ |.+|+++++.|+..|. +|++++++.-                  .+...+ ..+... +..-.++.+..
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~~~v~~~~~  108 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRI-NPHIAITPVNA  108 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH-CTTSEEEEECS
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHH-CCCcEEEEEec
Confidence            468999996 8999999999999996 8888888431                  111111 111111 00123455566


Q ss_pred             CCCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccc
Q 020334           65 DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSG  130 (327)
Q Consensus        65 D~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~  130 (327)
                      ++. .+.+.+++.++|+||.+...       .  +       .-..+.+.|++.+  ..+|+.+..
T Consensus       109 ~~~-~~~~~~~~~~~DvVi~~~d~-------~--~-------~~~~l~~~~~~~~--~p~i~~~~~  155 (249)
T 1jw9_B          109 LLD-DAELAALIAEHDLVLDCTDN-------V--A-------VRNQLNAGCFAAK--VPLVSGAAI  155 (249)
T ss_dssp             CCC-HHHHHHHHHTSSEEEECCSS-------H--H-------HHHHHHHHHHHHT--CCEEEEEEE
T ss_pred             cCC-HhHHHHHHhCCCEEEEeCCC-------H--H-------HHHHHHHHHHHcC--CCEEEeeec
Confidence            665 45567788899999988642       1  1       1234556666666  456665543

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.58  E-value=0.00012  Score=63.55  Aligned_cols=96  Identities=14%  Similarity=0.124  Sum_probs=62.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChh---HHHHHhc--CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPE---SFDAAIA--GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~~   79 (327)
                      .++|||+||+|.+|..+++.+...|++|++++| ++.+...+..+.      .. ..  .|..+.+   .+.++..  ++
T Consensus       167 g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~~g------a~-~~--~d~~~~~~~~~~~~~~~~~~~  236 (343)
T 2eih_A          167 GDDVLVMAAGSGVSVAAIQIAKLFGARVIATAG-SEDKLRRAKALG------AD-ET--VNYTHPDWPKEVRRLTGGKGA  236 (343)
T ss_dssp             TCEEEECSTTSTTHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHT------CS-EE--EETTSTTHHHHHHHHTTTTCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHhcC------CC-EE--EcCCcccHHHHHHHHhCCCCc
Confidence            578999999999999999999999999999999 443333332221      11 12  3554432   3334432  68


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccc
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSG  130 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~  130 (327)
                      |+||++++. .    .            ....++.++..   .+++.+++.
T Consensus       237 d~vi~~~g~-~----~------------~~~~~~~l~~~---G~~v~~g~~  267 (343)
T 2eih_A          237 DKVVDHTGA-L----Y------------FEGVIKATANG---GRIAIAGAS  267 (343)
T ss_dssp             EEEEESSCS-S----S------------HHHHHHHEEEE---EEEEESSCC
T ss_pred             eEEEECCCH-H----H------------HHHHHHhhccC---CEEEEEecC
Confidence            999999982 1    1            23445555554   488887753

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.57  E-value=0.00012  Score=66.08  Aligned_cols=73  Identities=19%  Similarity=0.293  Sum_probs=57.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~v   82 (327)
                      ..|+|+|.|+ |-+|+++++.|.+.|++|+++++ +++....+..   .    -.+..+.||.++++.++++ ++++|.+
T Consensus         2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~-d~~~~~~~~~---~----~~~~~i~Gd~~~~~~L~~Agi~~ad~~   72 (461)
T 4g65_A            2 NAMKIIILGA-GQVGGTLAENLVGENNDITIVDK-DGDRLRELQD---K----YDLRVVNGHASHPDVLHEAGAQDADML   72 (461)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHTCSTTEEEEEEES-CHHHHHHHHH---H----SSCEEEESCTTCHHHHHHHTTTTCSEE
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHHCCCCEEEEEC-CHHHHHHHHH---h----cCcEEEEEcCCCHHHHHhcCCCcCCEE
Confidence            3578999996 99999999999999999999999 5443333221   1    2578899999999999876 5689998


Q ss_pred             EEc
Q 020334           83 IHV   85 (327)
Q Consensus        83 ih~   85 (327)
                      |-+
T Consensus        73 ia~   75 (461)
T 4g65_A           73 VAV   75 (461)
T ss_dssp             EEC
T ss_pred             EEE
Confidence            844

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.54  E-value=0.00049  Score=59.05  Aligned_cols=115  Identities=18%  Similarity=0.190  Sum_probs=71.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      ++|+|.|+|+ |.+|+.++..|+..|+  +|.+++| ++..... ...+...............  .+.+    .+.++|
T Consensus         6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~-~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~----~~~~aD   77 (319)
T 1lld_A            6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDI-AKERVEAEVLDMQHGSSFYPTVSIDGS--DDPE----ICRDAD   77 (319)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-SHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGG----GGTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-ChhHHHHHHHHHHhhhhhcCCeEEEeC--CCHH----HhCCCC
Confidence            4578999997 9999999999999998  9999999 4322220 0011110000012222211  1222    356899


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEe
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYT  127 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~  127 (327)
                      +||-+++.......... +.+..|+.....+++.+++..+...++.+
T Consensus        78 ~Vii~v~~~~~~g~~r~-~~~~~n~~~~~~~~~~i~~~~~~~~vi~~  123 (319)
T 1lld_A           78 MVVITAGPRQKPGQSRL-ELVGATVNILKAIMPNLVKVAPNAIYMLI  123 (319)
T ss_dssp             EEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             EEEECCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCceEEEe
Confidence            99999875443333333 77889999999999988876523344433

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.53  E-value=0.00025  Score=61.32  Aligned_cols=95  Identities=14%  Similarity=0.016  Sum_probs=61.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh---hHHHHHhc--CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP---ESFDAAIA--GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~--~~   79 (327)
                      ..+|||+||+|.+|..+++.+...|.+|+++++ ++.+......+       .....+  |..+.   +.+.++..  ++
T Consensus       149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~~-------ga~~~~--~~~~~~~~~~~~~~~~~~g~  218 (334)
T 3qwb_A          149 GDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS-TDEKLKIAKEY-------GAEYLI--NASKEDILRQVLKFTNGKGV  218 (334)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHT-------TCSEEE--ETTTSCHHHHHHHHTTTSCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHc-------CCcEEE--eCCCchHHHHHHHHhCCCCc
Confidence            578999999999999999999999999999999 44333333222       111222  33332   33444432  58


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      |+||+++|..                 .....++.++..+   +++.++.
T Consensus       219 D~vid~~g~~-----------------~~~~~~~~l~~~G---~iv~~G~  248 (334)
T 3qwb_A          219 DASFDSVGKD-----------------TFEISLAALKRKG---VFVSFGN  248 (334)
T ss_dssp             EEEEECCGGG-----------------GHHHHHHHEEEEE---EEEECCC
T ss_pred             eEEEECCChH-----------------HHHHHHHHhccCC---EEEEEcC
Confidence            9999999831                 1234455555544   7887765

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.53  E-value=0.00033  Score=60.73  Aligned_cols=74  Identities=15%  Similarity=0.162  Sum_probs=51.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh---hHHHHHhc--CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP---ESFDAAIA--GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~--~~   79 (327)
                      ..+|||+||+|.+|..+++.+...|++|+++++ ++.+...+..+.      .. ..+  |..+.   +.+.++..  ++
T Consensus       145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~lg------a~-~~~--~~~~~~~~~~~~~~~~~~g~  214 (340)
T 3gms_A          145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTR-NNKHTEELLRLG------AA-YVI--DTSTAPLYETVMELTNGIGA  214 (340)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES-SSTTHHHHHHHT------CS-EEE--ETTTSCHHHHHHHHTTTSCE
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHhCC------Cc-EEE--eCCcccHHHHHHHHhCCCCC
Confidence            578999999999999999999889999999999 555544444331      11 222  33332   23333333  68


Q ss_pred             CEEEEccCC
Q 020334           80 AGVIHVAAP   88 (327)
Q Consensus        80 d~vih~a~~   88 (327)
                      |+||+|+|.
T Consensus       215 Dvvid~~g~  223 (340)
T 3gms_A          215 DAAIDSIGG  223 (340)
T ss_dssp             EEEEESSCH
T ss_pred             cEEEECCCC
Confidence            999999983

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.53  E-value=0.00022  Score=62.29  Aligned_cols=73  Identities=15%  Similarity=0.059  Sum_probs=48.7

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChh---HHHHHhc-CCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPE---SFDAAIA-GCA   80 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~-~~d   80 (327)
                      ++|||+||+|.||..+++.+...|+ +|+++++ ++.+...+..  ..     +.. ...|..+.+   .+.+... ++|
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~-~~~~~~~~~~--~~-----g~~-~~~d~~~~~~~~~~~~~~~~~~d  232 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICG-THEKCILLTS--EL-----GFD-AAINYKKDNVAEQLRESCPAGVD  232 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEES-CHHHHHHHHH--TS-----CCS-EEEETTTSCHHHHHHHHCTTCEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeC-CHHHHHHHHH--Hc-----CCc-eEEecCchHHHHHHHHhcCCCCC
Confidence            7899999999999999999999999 9999999 4322222221  01     111 123554432   2333322 589


Q ss_pred             EEEEccC
Q 020334           81 GVIHVAA   87 (327)
Q Consensus        81 ~vih~a~   87 (327)
                      +||+|+|
T Consensus       233 ~vi~~~G  239 (357)
T 2zb4_A          233 VYFDNVG  239 (357)
T ss_dssp             EEEESCC
T ss_pred             EEEECCC
Confidence            9999998

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.52  E-value=0.0004  Score=59.60  Aligned_cols=113  Identities=19%  Similarity=0.154  Sum_probs=72.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcchhh-hhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKDLS-FLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      |+|.|+|+ |.+|+.++..|+..|+  +|.++++ +++...... .+..............   .|.+    .++++|+|
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~-~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~~----~~~~aDvV   71 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDV-DKKRAEGDALDLIHGTPFTRRANIYA---GDYA----DLKGSDVV   71 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHHHGGGSCCCEEEE---CCGG----GGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeC-ChHHHHHHHHHHHhhhhhcCCcEEEe---CCHH----HhCCCCEE
Confidence            47999998 9999999999999998  9999999 443222211 1110000001122222   2322    36789999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      |-+++.......... +....|+.....+++.+.+..+...+|.+|
T Consensus        72 iiav~~~~~~g~~r~-dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t  116 (319)
T 1a5z_A           72 IVAAGVPQKPGETRL-QLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (319)
T ss_dssp             EECCCCCCCSSCCHH-HHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEccCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            999875443222333 778889999999999998875344566554

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.51  E-value=0.00035  Score=61.12  Aligned_cols=98  Identities=16%  Similarity=0.046  Sum_probs=61.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh-hHHHHHh-cCCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP-ESFDAAI-AGCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~-~~~d~v   82 (327)
                      ..+|||+||+|.+|..+++.+...|++|+++++ ++.+...+..+       .--..+..+-.+. +.+.+.. .++|+|
T Consensus       164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~-~~~~~~~~~~~-------Ga~~~~~~~~~~~~~~~~~~~~~g~D~v  235 (362)
T 2c0c_A          164 GKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS-SDEKSAFLKSL-------GCDRPINYKTEPVGTVLKQEYPEGVDVV  235 (362)
T ss_dssp             TCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHT-------TCSEEEETTTSCHHHHHHHHCTTCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC-CHHHHHHHHHc-------CCcEEEecCChhHHHHHHHhcCCCCCEE
Confidence            578999999999999999999999999999998 43333322221       1112222211121 2222222 268999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccc
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSG  130 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~  130 (327)
                      |++++.          .       .....++.++..+   +++.+++.
T Consensus       236 id~~g~----------~-------~~~~~~~~l~~~G---~iv~~g~~  263 (362)
T 2c0c_A          236 YESVGG----------A-------MFDLAVDALATKG---RLIVIGFI  263 (362)
T ss_dssp             EECSCT----------H-------HHHHHHHHEEEEE---EEEECCCG
T ss_pred             EECCCH----------H-------HHHHHHHHHhcCC---EEEEEeCC
Confidence            999882          1       1234556665544   88888764

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.50  E-value=0.00018  Score=62.25  Aligned_cols=74  Identities=15%  Similarity=0.120  Sum_probs=50.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChh---HHHHHhc--CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPE---SFDAAIA--GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~~   79 (327)
                      .++|||+||+|.+|..+++.+...|++|++++| ++.+...+..+.      .. ..  .|..+.+   .+.+...  ++
T Consensus       146 g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~~g------~~-~~--~d~~~~~~~~~i~~~~~~~~~  215 (333)
T 1wly_A          146 GDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS-TEEKAETARKLG------CH-HT--INYSTQDFAEVVREITGGKGV  215 (333)
T ss_dssp             TCEEEETTTTSTTHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHT------CS-EE--EETTTSCHHHHHHHHHTTCCE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHcC------CC-EE--EECCCHHHHHHHHHHhCCCCC
Confidence            578999999999999999999999999999999 443333222221      11 12  2444433   3333332  68


Q ss_pred             CEEEEccCC
Q 020334           80 AGVIHVAAP   88 (327)
Q Consensus        80 d~vih~a~~   88 (327)
                      |+||+|+|.
T Consensus       216 d~vi~~~g~  224 (333)
T 1wly_A          216 DVVYDSIGK  224 (333)
T ss_dssp             EEEEECSCT
T ss_pred             eEEEECCcH
Confidence            999999984

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.50  E-value=0.00016  Score=62.40  Aligned_cols=73  Identities=10%  Similarity=0.036  Sum_probs=50.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhH---HHHHhc--CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPES---FDAAIA--GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~--~~   79 (327)
                      .++|||+||+|.||..+++.+...|++|++++| ++.+...+..+.      .. ..  .|..+.+.   +.+...  ++
T Consensus       141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~-~~~~~~~~~~~g------~~-~~--~~~~~~~~~~~~~~~~~~~~~  210 (327)
T 1qor_A          141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG-TAQKAQSALKAG------AW-QV--INYREEDLVERLKEITGGKKV  210 (327)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES-SHHHHHHHHHHT------CS-EE--EETTTSCHHHHHHHHTTTCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHcC------CC-EE--EECCCccHHHHHHHHhCCCCc
Confidence            578999999999999999999999999999999 443333332221      11 12  34444333   333332  58


Q ss_pred             CEEEEccC
Q 020334           80 AGVIHVAA   87 (327)
Q Consensus        80 d~vih~a~   87 (327)
                      |+||+++|
T Consensus       211 D~vi~~~g  218 (327)
T 1qor_A          211 RVVYDSVG  218 (327)
T ss_dssp             EEEEECSC
T ss_pred             eEEEECCc
Confidence            99999998

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.49  E-value=0.00039  Score=58.84  Aligned_cols=34  Identities=38%  Similarity=0.405  Sum_probs=30.1

Q ss_pred             CCe-EEEe-CCc-----------------chhHHHHHHHHHHCCCeEEEEEcC
Q 020334            5 KGK-VCVT-GGT-----------------GFIGSWLIMRLLDHGYFVTTTVRS   38 (327)
Q Consensus         5 ~~~-ilVt-Gat-----------------G~iG~~l~~~L~~~g~~V~~~~r~   38 (327)
                      +++ |||| |+|                 |-.|.+++++++++|++|+.+.+.
T Consensus        36 gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~   88 (313)
T 1p9o_A           36 GRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA   88 (313)
T ss_dssp             TCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence            456 8988 667                 999999999999999999999984

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.48  E-value=0.00053  Score=60.35  Aligned_cols=69  Identities=16%  Similarity=0.246  Sum_probs=53.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ++++|+|+|+ |.+|..+++.+.+.|++|++++..........           --.++.+|..|.+.+.++++++|+|.
T Consensus        11 ~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~-----------ad~~~~~~~~d~~~l~~~~~~~dvi~   78 (377)
T 3orq_A           11 FGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV-----------AHEFIQAKYDDEKALNQLGQKCDVIT   78 (377)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG-----------SSEEEECCTTCHHHHHHHHHHCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhh-----------CCEEEECCCCCHHHHHHHHHhCCcce
Confidence            3578999995 99999999999999999999988322111111           12567799999999999988899875


Q ss_pred             E
Q 020334           84 H   84 (327)
Q Consensus        84 h   84 (327)
                      .
T Consensus        79 ~   79 (377)
T 3orq_A           79 Y   79 (377)
T ss_dssp             E
T ss_pred             e
Confidence            4

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.47  E-value=0.00047  Score=57.42  Aligned_cols=33  Identities=24%  Similarity=0.345  Sum_probs=28.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CCeEEE-EEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GYFVTT-TVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~-~~r   37 (327)
                      |+||.|+||+|.+|+.+++.+.+. ++++.+ ++|
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~   41 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDR   41 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCC
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEe
Confidence            578999999999999999999876 677766 455

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.45  E-value=0.00017  Score=62.70  Aligned_cols=74  Identities=12%  Similarity=0.139  Sum_probs=48.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh----hHHHHHh-cCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP----ESFDAAI-AGC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~----~~~~~~~-~~~   79 (327)
                      .++|||+||+|.+|..+++.+...|++|++++| ++.+...+..  ..     +... ..|..+.    +.+.++. .++
T Consensus       156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~-~~~~~~~~~~--~~-----g~~~-~~d~~~~~~~~~~~~~~~~~~~  226 (345)
T 2j3h_A          156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAG-SKEKVDLLKT--KF-----GFDD-AFNYKEESDLTAALKRCFPNGI  226 (345)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHH--TS-----CCSE-EEETTSCSCSHHHHHHHCTTCE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH--Hc-----CCce-EEecCCHHHHHHHHHHHhCCCC
Confidence            578999999999999999999999999999998 4333222220  11     1111 1244432    2233322 268


Q ss_pred             CEEEEccC
Q 020334           80 AGVIHVAA   87 (327)
Q Consensus        80 d~vih~a~   87 (327)
                      |+||+++|
T Consensus       227 d~vi~~~g  234 (345)
T 2j3h_A          227 DIYFENVG  234 (345)
T ss_dssp             EEEEESSC
T ss_pred             cEEEECCC
Confidence            99999987

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.45  E-value=0.00071  Score=58.82  Aligned_cols=94  Identities=14%  Similarity=0.191  Sum_probs=61.1

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh---hHHHHHh--cCCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP---ESFDAAI--AGCA   80 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~--~~~d   80 (327)
                      ++++|+||+|.+|..+++.+...|.+|+++++ ++.+...+..+-       -...+  |..+.   +.+.++.  .++|
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~-~~~~~~~~~~~G-------a~~~~--~~~~~~~~~~v~~~~~~~g~D  235 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVR-RDEQIALLKDIG-------AAHVL--NEKAPDFEATLREVMKAEQPR  235 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEES-CGGGHHHHHHHT-------CSEEE--ETTSTTHHHHHHHHHHHHCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHcC-------CCEEE--ECCcHHHHHHHHHHhcCCCCc
Confidence            68999999999999999999999999999998 544444333321       11222  33332   2233333  2799


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      +||+|++.          ..       ....++.++..+   +++.+++
T Consensus       236 ~vid~~g~----------~~-------~~~~~~~l~~~G---~iv~~G~  264 (349)
T 3pi7_A          236 IFLDAVTG----------PL-------ASAIFNAMPKRA---RWIIYGR  264 (349)
T ss_dssp             EEEESSCH----------HH-------HHHHHHHSCTTC---EEEECCC
T ss_pred             EEEECCCC----------hh-------HHHHHhhhcCCC---EEEEEec
Confidence            99999983          11       134455555544   8888775

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.42  E-value=0.00048  Score=60.00  Aligned_cols=34  Identities=35%  Similarity=0.434  Sum_probs=29.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r   37 (327)
                      |++||.|.||||++|+.+++.|.+.+ .+|.++.+
T Consensus         7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~   41 (354)
T 1ys4_A            7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAA   41 (354)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred             ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEc
Confidence            34689999999999999999998764 68888875

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.39  E-value=0.0003  Score=60.89  Aligned_cols=98  Identities=16%  Similarity=0.084  Sum_probs=61.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhH---HHHHh-cCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPES---FDAAI-AGCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~-~~~d   80 (327)
                      +++|||+||+|.||..+++.+...|++|++++| ++.+...+.  ...     +... ..|..+.+.   +.++. .++|
T Consensus       150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~--~~~-----g~~~-~~~~~~~~~~~~~~~~~~~~~d  220 (336)
T 4b7c_A          150 GETVVISGAAGAVGSVAGQIARLKGCRVVGIAG-GAEKCRFLV--EEL-----GFDG-AIDYKNEDLAAGLKRECPKGID  220 (336)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHH--HTT-----CCSE-EEETTTSCHHHHHHHHCTTCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHc-----CCCE-EEECCCHHHHHHHHHhcCCCce
Confidence            578999999999999999999999999999998 443332220  121     1111 124444332   22222 2589


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS  131 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~  131 (327)
                      +||+++|.          .       .....++.++..   .+++.+++..
T Consensus       221 ~vi~~~g~----------~-------~~~~~~~~l~~~---G~iv~~G~~~  251 (336)
T 4b7c_A          221 VFFDNVGG----------E-------ILDTVLTRIAFK---ARIVLCGAIS  251 (336)
T ss_dssp             EEEESSCH----------H-------HHHHHHTTEEEE---EEEEECCCGG
T ss_pred             EEEECCCc----------c-------hHHHHHHHHhhC---CEEEEEeecc
Confidence            99999982          1       123344444443   4888887644

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.37  E-value=0.00046  Score=58.97  Aligned_cols=113  Identities=17%  Similarity=0.080  Sum_probs=69.2

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchhh-hhhCC-CCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLS-FLTNL-PGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      |+|.|+| +|.+|+.++..|++.|  ++|.+++| +++....+. .+... ......++....|   .    +.++++|+
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~d---~----~~~~~aDv   72 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDA-NEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALADADV   72 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGTTCSE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcC-CHHHHHHHHHHHHhhhhhcCCCeEEEeCC---H----HHhCCCCE
Confidence            5899999 6999999999999998  79999999 443332221 11100 0000123332233   2    24678999


Q ss_pred             EEEccCCCCC----CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           82 VIHVAAPIDI----DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        82 vih~a~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      ||-+++....    ...... +....|+.....+++.+.+..+...++.+|
T Consensus        73 Viiav~~~~~~~~~~g~~r~-~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t  122 (309)
T 1hyh_A           73 VISTLGNIKLQQDNPTGDRF-AELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (309)
T ss_dssp             EEECCSCGGGTC-------C-TTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEecCCcccCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            9998875321    111122 457788888899999888765334555544

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=97.35  E-value=0.00068  Score=60.21  Aligned_cols=69  Identities=22%  Similarity=0.241  Sum_probs=53.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +++|+|+|+ |.+|..+++.+.+.|++|++++ ........+.         .....+.+|..|.+.+.++++.+|+|+.
T Consensus        24 ~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~a---------d~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           24 SRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAKQIS---------AHDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGC---------CSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhc---------cccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            578999996 8999999999999999999998 4433222221         1224567899999999999999998864

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.34  E-value=0.00062  Score=59.06  Aligned_cols=75  Identities=17%  Similarity=0.109  Sum_probs=51.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh-hHHHHHhc--CCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP-ESFDAAIA--GCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~--~~d~   81 (327)
                      ..+|||+||+|.+|..+++.+...|.+|+++++ ++.+......+.       --..+..+ .+. +.+.++..  ++|+
T Consensus       160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~~g-------a~~v~~~~-~~~~~~v~~~~~~~g~Dv  230 (342)
T 4eye_A          160 GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVN-RTAATEFVKSVG-------ADIVLPLE-EGWAKAVREATGGAGVDM  230 (342)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHT-------CSEEEESS-TTHHHHHHHHTTTSCEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHhcC-------CcEEecCc-hhHHHHHHHHhCCCCceE
Confidence            578999999999999999999999999999999 554444433321       11233333 222 23334433  5899


Q ss_pred             EEEccCC
Q 020334           82 VIHVAAP   88 (327)
Q Consensus        82 vih~a~~   88 (327)
                      ||+|+|.
T Consensus       231 vid~~g~  237 (342)
T 4eye_A          231 VVDPIGG  237 (342)
T ss_dssp             EEESCC-
T ss_pred             EEECCch
Confidence            9999984

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.34  E-value=0.00053  Score=59.71  Aligned_cols=98  Identities=16%  Similarity=0.174  Sum_probs=57.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +||.|.||+|++|+.+++.|.+.+ .++.++.+.. .....+.......  ...+   ..|+.-.+  .+.+.++|+|+.
T Consensus        17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~-~~g~~~~~~~~~~--~~~v---~~dl~~~~--~~~~~~vDvVf~   88 (359)
T 1xyg_A           17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADR-KAGQSMESVFPHL--RAQK---LPTLVSVK--DADFSTVDAVFC   88 (359)
T ss_dssp             EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCST-TTTSCHHHHCGGG--TTSC---CCCCBCGG--GCCGGGCSEEEE
T ss_pred             cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCch-hcCCCHHHhCchh--cCcc---cccceecc--hhHhcCCCEEEE
Confidence            589999999999999999999875 4777776622 2212221110000  0011   12332222  334567999998


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS  131 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~  131 (327)
                      |.+...                 +...+..+ +.|  .++|-.|+..
T Consensus        89 atp~~~-----------------s~~~a~~~-~aG--~~VId~sa~~  115 (359)
T 1xyg_A           89 CLPHGT-----------------TQEIIKEL-PTA--LKIVDLSADF  115 (359)
T ss_dssp             CCCTTT-----------------HHHHHHTS-CTT--CEEEECSSTT
T ss_pred             cCCchh-----------------HHHHHHHH-hCC--CEEEECCccc
Confidence            886321                 23455556 556  4688888753

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.33  E-value=0.00054  Score=61.14  Aligned_cols=68  Identities=19%  Similarity=0.285  Sum_probs=52.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +++|+|+|+ |.+|..+++.+.+.|++|++++. .+....  ...        .-..+..|..|.+.+.++++++|+|+.
T Consensus        35 ~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~-~~~~p~--~~~--------ad~~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           35 GAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDP-DPASPA--GAV--------ADRHLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-CTTCHH--HHH--------SSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEECC-CCcCch--hhh--------CCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence            578999995 89999999999999999999976 332221  111        125667899999999998888999883

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.33  E-value=6.1e-05  Score=56.63  Aligned_cols=71  Identities=17%  Similarity=0.186  Sum_probs=49.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      .++|+|+|+ |.+|+.+++.|.+.|++|++.+| ++.+...+....       ++...     ..+++.+.+.++|+||.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r-~~~~~~~~a~~~-------~~~~~-----~~~~~~~~~~~~Divi~   86 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGR-NIDHVRAFAEKY-------EYEYV-----LINDIDSLIKNNDVIIT   86 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEES-CHHHHHHHHHHH-------TCEEE-----ECSCHHHHHHTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC-CHHHHHHHHHHh-------CCceE-----eecCHHHHhcCCCEEEE
Confidence            578999996 99999999999999999999999 543333222111       12221     12235566778999999


Q ss_pred             ccCCC
Q 020334           85 VAAPI   89 (327)
Q Consensus        85 ~a~~~   89 (327)
                      +.+..
T Consensus        87 at~~~   91 (144)
T 3oj0_A           87 ATSSK   91 (144)
T ss_dssp             CSCCS
T ss_pred             eCCCC
Confidence            87643

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=97.33  E-value=0.0011  Score=56.57  Aligned_cols=167  Identities=14%  Similarity=0.111  Sum_probs=97.0

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcch-hhhhhCCC-CCCCCeEEEe-CCCCChhHHHHHhcCCCEE
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKD-LSFLTNLP-GASERLQIFN-ADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~-~~~~~~~~~~-~D~~d~~~~~~~~~~~d~v   82 (327)
                      ||.|+|| |.+|+.++..|+..|. +|..+++ +.+.... ...+.... ......++.. .|   .    +.++++|+|
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di-~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d---~----~a~~~aD~V   71 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIAR-TPGKPQGEALDLAHAAAELGVDIRISGSNS---Y----EDMRGSDIV   71 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECS-STTHHHHHHHHHHHHHHHHTCCCCEEEESC---G----GGGTTCSEE
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcC-ChhhHHHHHHHHHHhhhhcCCCeEEEECCC---H----HHhCCCCEE
Confidence            5899998 9999999999988787 7999998 4433222 11111100 0001222222 33   2    247789999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      |-+++.......... +....|+...+.+++.+.+..+..+++.+|-..-.         +++-..   . . ..-++..
T Consensus        72 i~~ag~~~k~G~~r~-dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~---------~t~~~~---k-~-~~~p~~r  136 (308)
T 2d4a_B           72 LVTAGIGRKPGMTRE-QLLEANANTMADLAEKIKAYAKDAIVVITTNPVDA---------MTYVMY---K-K-TGFPRER  136 (308)
T ss_dssp             EECCSCCCCSSCCTH-HHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH---------HHHHHH---H-H-HCCCGGG
T ss_pred             EEeCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHH---------HHHHHH---H-h-cCCChhh
Confidence            999986543334444 77899999999999999987645577766532100         000000   0 0 0012233


Q ss_pred             hhHh-hhHHHHHHHHHHHHHcCCcEEEEecCceecCC
Q 020334          163 SYVL-TKTLTERAALEFAEEHGLDLVTLIPSFVVGPF  198 (327)
Q Consensus       163 ~Y~~-sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~  198 (327)
                      ..|. +-+..-++....++..|++..-++.. ++|..
T Consensus       137 viG~gt~LD~~R~~~~la~~lgv~~~~v~~~-v~G~H  172 (308)
T 2d4a_B          137 VIGFSGILDSARMAYYISQKLGVSFKSVNAI-VLGMH  172 (308)
T ss_dssp             EEECCHHHHHHHHHHHHHHHHTSCGGGEECC-EEBCS
T ss_pred             EEEecccchHHHHHHHHHHHhCcChhHeEEE-EEecc
Confidence            4555 44445555555666667765555543 77854

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.33  E-value=0.0002  Score=62.04  Aligned_cols=70  Identities=14%  Similarity=0.097  Sum_probs=56.8

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVIH   84 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vih   84 (327)
                      ++|+|.|+ |.+|+.+++.|.+.|+ |+++++ +++... +.   .     .++..+.||.+|++.+.++ ++++|.|+-
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~-~~~~~~-~~---~-----~~~~~i~gd~~~~~~L~~a~i~~a~~vi~  183 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAED-ENVRKK-VL---R-----SGANFVHGDPTRVSDLEKANVRGARAVIV  183 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESC-GGGHHH-HH---H-----TTCEEEESCTTSHHHHHHTCSTTEEEEEE
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeC-Chhhhh-HH---h-----CCcEEEEeCCCCHHHHHhcChhhccEEEE
Confidence            47999996 9999999999999999 999988 544333 22   1     4688999999999999877 778999987


Q ss_pred             ccC
Q 020334           85 VAA   87 (327)
Q Consensus        85 ~a~   87 (327)
                      +.+
T Consensus       184 ~~~  186 (336)
T 1lnq_A          184 DLE  186 (336)
T ss_dssp             CCS
T ss_pred             cCC
Confidence            654

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=97.32  E-value=0.0029  Score=53.69  Aligned_cols=111  Identities=17%  Similarity=0.115  Sum_probs=73.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ++||.|+|| |.+|+.++..|+..|.  +|..+++ +++.......+....  .++++. ..|+       +.++++|+|
T Consensus        14 ~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di-~~~~~g~a~dl~~~~--~~~i~~-t~d~-------~~l~~aD~V   81 (303)
T 2i6t_A           14 VNKITVVGG-GELGIACTLAISAKGIADRLVLLDL-SEGTKGATMDLEIFN--LPNVEI-SKDL-------SASAHSKVV   81 (303)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECC-C-----CHHHHHHHT--CTTEEE-ESCG-------GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcC-CcchHHHHHHHhhhc--CCCeEE-eCCH-------HHHCCCCEE
Confidence            478999996 9999999999999988  8999999 432222222222111  124443 2332       347789999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      |-+++.. ....... +....|+...+.+++.+.+..+...++.+|-
T Consensus        82 i~aag~~-~pG~tR~-dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN  126 (303)
T 2i6t_A           82 IFTVNSL-GSSQSYL-DVVQSNVDMFRALVPALGHYSQHSVLLVASQ  126 (303)
T ss_dssp             EECCCC-----CCHH-HHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred             EEcCCCC-CCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence            9999863 2233333 7789999999999999998764456666664

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.31  E-value=0.00065  Score=54.72  Aligned_cols=67  Identities=21%  Similarity=0.256  Sum_probs=47.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ++++|.|+| +|.+|+.+++.|.+.|++|++.+| +++..   ..+..     .+++..        ++.+.++++|+||
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r-~~~~~---~~~~~-----~g~~~~--------~~~~~~~~~DvVi   88 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSR-NPKRT---ARLFP-----SAAQVT--------FQEEAVSSPEVIF   88 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEES-SHHHH---HHHSB-----TTSEEE--------EHHHHTTSCSEEE
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeC-CHHHH---HHHHH-----cCCcee--------cHHHHHhCCCEEE
Confidence            356899999 799999999999999999999999 43322   22211     133331        3456678899999


Q ss_pred             EccCC
Q 020334           84 HVAAP   88 (327)
Q Consensus        84 h~a~~   88 (327)
                      .+...
T Consensus        89 ~av~~   93 (215)
T 2vns_A           89 VAVFR   93 (215)
T ss_dssp             ECSCG
T ss_pred             ECCCh
Confidence            88753

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.29  E-value=0.00055  Score=58.13  Aligned_cols=34  Identities=26%  Similarity=0.438  Sum_probs=31.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      |+++|.|+||+|.+|..+++.|.+.|++|++.+|
T Consensus        20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~   53 (298)
T 2pv7_A           20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDR   53 (298)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECT
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEEC
Confidence            5578999998999999999999999999999988

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.29  E-value=0.0014  Score=58.53  Aligned_cols=96  Identities=14%  Similarity=0.241  Sum_probs=63.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CC---eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCC--CChhH-HHHHhc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GY---FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL--NDPES-FDAAIA   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~d~~~-~~~~~~   77 (327)
                      +++|+|+| .|.||+.+++.|+++ ++   +|++++.+. ........+        ++++...++  .|.++ +.++++
T Consensus        13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~-~~~~~~~~~--------g~~~~~~~Vdadnv~~~l~aLl~   82 (480)
T 2ph5_A           13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEG-TKVDVAQQY--------GVSFKLQQITPQNYLEVIGSTLE   82 (480)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSC-CSCCHHHHH--------TCEEEECCCCTTTHHHHTGGGCC
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccch-hhhhHHhhc--------CCceeEEeccchhHHHHHHHHhc
Confidence            47899999 699999999999986 44   688887733 222222111        345555555  44433 556777


Q ss_pred             CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce
Q 020334           78 GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS  131 (327)
Q Consensus        78 ~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~  131 (327)
                      +.|+|||++-..                 ....++++|.+.|    +-|++++.
T Consensus        83 ~~DvVIN~s~~~-----------------~~l~Im~acleaG----v~YlDTa~  115 (480)
T 2ph5_A           83 ENDFLIDVSIGI-----------------SSLALIILCNQKG----ALYINAAT  115 (480)
T ss_dssp             TTCEEEECCSSS-----------------CHHHHHHHHHHHT----CEEEESSC
T ss_pred             CCCEEEECCccc-----------------cCHHHHHHHHHcC----CCEEECCC
Confidence            679999865322                 1357899999987    45566653

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.27  E-value=0.00024  Score=59.52  Aligned_cols=74  Identities=16%  Similarity=0.196  Sum_probs=47.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..++++|+|+ |.+|+++++.|++.|++|++.+| +.++...+......   ...+.  ..|.   +.+.+  .++|+||
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R-~~~~~~~la~~~~~---~~~~~--~~~~---~~~~~--~~~DivV  185 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNR-TVSRAEELAKLFAH---TGSIQ--ALSM---DELEG--HEFDLII  185 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-SHHHHHHHHHHTGG---GSSEE--ECCS---GGGTT--CCCSEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEEC-CHHHHHHHHHHhhc---cCCee--EecH---HHhcc--CCCCEEE
Confidence            3578999998 77999999999999999999999 44333222211110   01121  1232   22222  5799999


Q ss_pred             EccCCC
Q 020334           84 HVAAPI   89 (327)
Q Consensus        84 h~a~~~   89 (327)
                      ++++..
T Consensus       186 n~t~~~  191 (271)
T 1nyt_A          186 NATSSG  191 (271)
T ss_dssp             ECCSCG
T ss_pred             ECCCCC
Confidence            999753

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.27  E-value=0.00024  Score=60.47  Aligned_cols=82  Identities=12%  Similarity=0.093  Sum_probs=51.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ..+++||+|+ |..|++++..|++.|. +|+++.| +++...+...+........+......+..+.+.+.+.+.++|+|
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nR-t~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI  224 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNR-KDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL  224 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEEC-SSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEEC-CCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence            3679999997 8999999999999998 8999999 52222222221110000012223334555544445667778999


Q ss_pred             EEccC
Q 020334           83 IHVAA   87 (327)
Q Consensus        83 ih~a~   87 (327)
                      |++..
T Consensus       225 INaTp  229 (312)
T 3t4e_A          225 TNGTK  229 (312)
T ss_dssp             EECSS
T ss_pred             EECCc
Confidence            98864

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.26  E-value=0.00019  Score=62.74  Aligned_cols=74  Identities=22%  Similarity=0.280  Sum_probs=52.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      .++|+|+|+ |-+|..+++.|...|.+|++++| ++.+...+.....     ..+..+   ..+.+.+.+.+.++|+||+
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr-~~~r~~~~~~~~~-----~~~~~~---~~~~~~~~~~~~~~DvVI~  236 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDI-NVERLSYLETLFG-----SRVELL---YSNSAEIETAVAEADLLIG  236 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHG-----GGSEEE---ECCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeC-CHHHHHHHHHhhC-----ceeEee---eCCHHHHHHHHcCCCEEEE
Confidence            478999998 99999999999999999999999 5444333322211     112121   2345567777789999999


Q ss_pred             ccCC
Q 020334           85 VAAP   88 (327)
Q Consensus        85 ~a~~   88 (327)
                      +++.
T Consensus       237 ~~~~  240 (361)
T 1pjc_A          237 AVLV  240 (361)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9875

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=97.25  E-value=0.0008  Score=59.91  Aligned_cols=114  Identities=16%  Similarity=0.126  Sum_probs=64.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEe-------------CCCCChh
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN-------------ADLNDPE   70 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~D~~d~~   70 (327)
                      .|.+|.|+| .||+|..++..|++.|++|++++. ++.   ++..+.+-     ...+.+             +.+.-..
T Consensus        20 ~m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Di-d~~---kV~~ln~G-----~~pi~Epgl~ell~~~~~~g~l~~tt   89 (444)
T 3vtf_A           20 HMASLSVLG-LGYVGVVHAVGFALLGHRVVGYDV-NPS---IVERLRAG-----RPHIYEPGLEEALGRALSSGRLSFAE   89 (444)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECS-CHH---HHHHHHTT-----CCSSCCTTHHHHHHHHHHTTCEEECS
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEEC-CHH---HHHHHHCC-----CCCCCCCCHHHHHHHHHHcCCeeEEc
Confidence            357899998 699999999999999999999998 433   33333221     111111             1111111


Q ss_pred             HHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccc
Q 020334           71 SFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSG  130 (327)
Q Consensus        71 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~  130 (327)
                      +..+.+..+|++|-|.+........++..+.   ......+.+.++..++..-+|+=||.
T Consensus        90 ~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v---~~a~~~I~~~l~~~~~g~lVV~eSTV  146 (444)
T 3vtf_A           90 SAEEAVAATDATFIAVGTPPAPDGSADLRYV---EAAARAVGRGIRAKGRWHLVVVKSTV  146 (444)
T ss_dssp             SHHHHHHTSSEEEECCCCCBCTTSSBCCHHH---HHHHHHHHHHHHHHCSCCEEEECSCC
T ss_pred             CHHHHHhcCCceEEEecCCCCCCCCCCcHHH---HHHHHHHHHHHhhcCCCeEEEEeCCC
Confidence            2344566789988887643222222221222   23445666666654323456666764

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.25  E-value=0.00046  Score=59.41  Aligned_cols=74  Identities=16%  Similarity=0.130  Sum_probs=50.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh---hHHHHHhc--CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP---ESFDAAIA--GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~--~~   79 (327)
                      ..+|||+||+|.+|..+++.+...|++|+++++ ++.+......+.       ....+  |..+.   +.+.++..  ++
T Consensus       141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~~G-------a~~~~--~~~~~~~~~~~~~~~~~~g~  210 (325)
T 3jyn_A          141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVS-SPEKAAHAKALG-------AWETI--DYSHEDVAKRVLELTDGKKC  210 (325)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES-SHHHHHHHHHHT-------CSEEE--ETTTSCHHHHHHHHTTTCCE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHcC-------CCEEE--eCCCccHHHHHHHHhCCCCc
Confidence            578999999999999999999999999999998 443333333221       11222  33332   33344433  68


Q ss_pred             CEEEEccCC
Q 020334           80 AGVIHVAAP   88 (327)
Q Consensus        80 d~vih~a~~   88 (327)
                      |+||+++|.
T Consensus       211 Dvvid~~g~  219 (325)
T 3jyn_A          211 PVVYDGVGQ  219 (325)
T ss_dssp             EEEEESSCG
T ss_pred             eEEEECCCh
Confidence            999999983

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.25  E-value=0.0013  Score=57.58  Aligned_cols=75  Identities=20%  Similarity=0.207  Sum_probs=52.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ...+|||+|+ |.+|..+++.+...|.+|+++++ ++.+.....  ...     +... ..|..+.+.+.++..++|+||
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~-~~~~~~~~~--~~l-----Ga~~-v~~~~~~~~~~~~~~~~D~vi  256 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVIST-SPSKKEEAL--KNF-----GADS-FLVSRDQEQMQAAAGTLDGII  256 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CGGGHHHHH--HTS-----CCSE-EEETTCHHHHHHTTTCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--Hhc-----CCce-EEeccCHHHHHHhhCCCCEEE
Confidence            3578999996 99999999999999999999998 443322221  011     1111 135556666666666899999


Q ss_pred             EccCC
Q 020334           84 HVAAP   88 (327)
Q Consensus        84 h~a~~   88 (327)
                      ++++.
T Consensus       257 d~~g~  261 (366)
T 1yqd_A          257 DTVSA  261 (366)
T ss_dssp             ECCSS
T ss_pred             ECCCc
Confidence            99984

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.23  E-value=0.0005  Score=58.52  Aligned_cols=73  Identities=19%  Similarity=0.102  Sum_probs=50.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      ..+|||+||+|.+|..+++.+...|++|+++++ ++.+......+        +...+ .|..+.+++.+.+.++|+||+
T Consensus       126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~~--------ga~~~-~~~~~~~~~~~~~~~~d~vid  195 (302)
T 1iz0_A          126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS-RPEKLALPLAL--------GAEEA-ATYAEVPERAKAWGGLDLVLE  195 (302)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES-SGGGSHHHHHT--------TCSEE-EEGGGHHHHHHHTTSEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHhc--------CCCEE-EECCcchhHHHHhcCceEEEE
Confidence            578999999999999999999999999999999 54443333322        11111 244441334444478999999


Q ss_pred             ccCC
Q 020334           85 VAAP   88 (327)
Q Consensus        85 ~a~~   88 (327)
                       +|.
T Consensus       196 -~g~  198 (302)
T 1iz0_A          196 -VRG  198 (302)
T ss_dssp             -CSC
T ss_pred             -CCH
Confidence             873

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.22  E-value=0.00058  Score=59.32  Aligned_cols=74  Identities=12%  Similarity=0.106  Sum_probs=50.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChh---HHHHHhc--C
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPE---SFDAAIA--G   78 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~   78 (327)
                      .++|||+||+|.+|..+++.+... |++|+++++ ++.+......+.      .. ..  .|..+.+   .+.++..  +
T Consensus       171 g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~-~~~~~~~~~~~g------~~-~~--~~~~~~~~~~~~~~~~~~~~  240 (347)
T 1jvb_A          171 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV-REEAVEAAKRAG------AD-YV--INASMQDPLAEIRRITESKG  240 (347)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES-SHHHHHHHHHHT------CS-EE--EETTTSCHHHHHHHHTTTSC
T ss_pred             CCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC-CHHHHHHHHHhC------CC-EE--ecCCCccHHHHHHHHhcCCC
Confidence            578999999999999999999998 999999998 443333332221      11 12  2343332   3444443  6


Q ss_pred             CCEEEEccCC
Q 020334           79 CAGVIHVAAP   88 (327)
Q Consensus        79 ~d~vih~a~~   88 (327)
                      +|+||+++|.
T Consensus       241 ~d~vi~~~g~  250 (347)
T 1jvb_A          241 VDAVIDLNNS  250 (347)
T ss_dssp             EEEEEESCCC
T ss_pred             ceEEEECCCC
Confidence            8999999984

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=97.21  E-value=0.00024  Score=61.86  Aligned_cols=83  Identities=18%  Similarity=0.202  Sum_probs=48.5

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      |+.++|+|.|+|+ |.+|++++..|++.|++|++.+| +++....+......+.-.+++.+ ...+.-..++.+.+.++|
T Consensus        25 m~~~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r-~~~~~~~i~~~~~~~~~l~g~~l-~~~i~~t~d~~ea~~~aD  101 (356)
T 3k96_A           25 MEPFKHPIAILGA-GSWGTALALVLARKGQKVRLWSY-ESDHVDEMQAEGVNNRYLPNYPF-PETLKAYCDLKASLEGVT  101 (356)
T ss_dssp             --CCCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECS-CHHHHHHHHHHSSBTTTBTTCCC-CTTEEEESCHHHHHTTCC
T ss_pred             ccccCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHcCCCcccCCCCcc-CCCeEEECCHHHHHhcCC
Confidence            4444578999995 99999999999999999999999 54333222211000000011110 011111123556678899


Q ss_pred             EEEEcc
Q 020334           81 GVIHVA   86 (327)
Q Consensus        81 ~vih~a   86 (327)
                      +||-+.
T Consensus       102 vVilaV  107 (356)
T 3k96_A          102 DILIVV  107 (356)
T ss_dssp             EEEECC
T ss_pred             EEEECC
Confidence            999765

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.21  E-value=0.00025  Score=54.13  Aligned_cols=72  Identities=19%  Similarity=0.236  Sum_probs=49.5

Q ss_pred             cchhHHHHHHHHHHCCCeEEEEEcCCCCCcc---hhhhhhCCCCCCCCeEEEeCCCCCh--hHHHHHhc------CCCEE
Q 020334           14 TGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK---DLSFLTNLPGASERLQIFNADLNDP--ESFDAAIA------GCAGV   82 (327)
Q Consensus        14 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~------~~d~v   82 (327)
                      +|+++.+.++.|++.|++|++..|+..+...   ....+...   +.++..+.+|++++  +++.++++      +-|++
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~---G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVL  101 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA---GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVL  101 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT---TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc---CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEE
Confidence            4789999999999999999888784332211   11112111   23566778999998  87776553      23999


Q ss_pred             EEccCC
Q 020334           83 IHVAAP   88 (327)
Q Consensus        83 ih~a~~   88 (327)
                      |||||.
T Consensus       102 VnnAgg  107 (157)
T 3gxh_A          102 VHCLAN  107 (157)
T ss_dssp             EECSBS
T ss_pred             EECCCC
Confidence            999985

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.19  E-value=0.00073  Score=58.88  Aligned_cols=74  Identities=18%  Similarity=0.157  Sum_probs=50.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh---hHHHHHh-cCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP---ESFDAAI-AGCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~-~~~d   80 (327)
                      ..+|||+||+|.+|..+++.+...|++|+++++ ++.+...+..+.      .. ..+  |..+.   +.+.++. .++|
T Consensus       168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~lG------a~-~~~--~~~~~~~~~~~~~~~~~g~D  237 (353)
T 4dup_A          168 GESVLIHGGTSGIGTTAIQLARAFGAEVYATAG-STGKCEACERLG------AK-RGI--NYRSEDFAAVIKAETGQGVD  237 (353)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHT------CS-EEE--ETTTSCHHHHHHHHHSSCEE
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHhcC------CC-EEE--eCCchHHHHHHHHHhCCCce
Confidence            578999999999999999999999999999998 444433333321      11 222  33332   2233322 2689


Q ss_pred             EEEEccCC
Q 020334           81 GVIHVAAP   88 (327)
Q Consensus        81 ~vih~a~~   88 (327)
                      +||+|+|.
T Consensus       238 vvid~~g~  245 (353)
T 4dup_A          238 IILDMIGA  245 (353)
T ss_dssp             EEEESCCG
T ss_pred             EEEECCCH
Confidence            99999983

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.18  E-value=0.00059  Score=57.86  Aligned_cols=68  Identities=24%  Similarity=0.224  Sum_probs=42.1

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      .|.+||-++| .|.+|..+++.|++.||+|++.+| ++++...+..        .+.+..       ++..++++++|+|
T Consensus         3 ~Ms~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr-~~~~~~~l~~--------~G~~~~-------~s~~e~~~~~dvv   65 (297)
T 4gbj_A            3 AMSEKIAFLG-LGNLGTPIAEILLEAGYELVVWNR-TASKAEPLTK--------LGATVV-------ENAIDAITPGGIV   65 (297)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC--------CTTTT--------TTCEEC-------SSGGGGCCTTCEE
T ss_pred             CCCCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHH--------cCCeEe-------CCHHHHHhcCCce
Confidence            3567899999 699999999999999999999999 5544433321        122221       1233455667877


Q ss_pred             EEccC
Q 020334           83 IHVAA   87 (327)
Q Consensus        83 ih~a~   87 (327)
                      |-|..
T Consensus        66 i~~l~   70 (297)
T 4gbj_A           66 FSVLA   70 (297)
T ss_dssp             EECCS
T ss_pred             eeecc
Confidence            76654

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.17  E-value=0.002  Score=55.34  Aligned_cols=102  Identities=20%  Similarity=0.156  Sum_probs=58.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCC--CCcchhhhhhC-CCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDP--EHKKDLSFLTN-LPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~--~~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      |++|.|+||||++|..|++.|.+. .+++..+..+.+  ..-..+..... ... .....+...  .+.+   ++..++|
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~-~~~~~v~~~--~~~~---~~~~~~D   77 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKG-IVELPLQPM--SDIS---EFSPGVD   77 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTT-TCCCBEEEE--SSGG---GTCTTCS
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccC-ccceeEecc--CCHH---HHhcCCC
Confidence            578999999999999999999985 568877755231  11122221110 000 001222111  0222   2236899


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS  131 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~  131 (327)
                      +|+-|.+.          .       ....++..+.+.+  .++|=.|+..
T Consensus        78 vvf~a~p~----------~-------~s~~~~~~~~~~g--~~vIDlSa~f  109 (337)
T 3dr3_A           78 VVFLATAH----------E-------VSHDLAPQFLEAG--CVVFDLSGAF  109 (337)
T ss_dssp             EEEECSCH----------H-------HHHHHHHHHHHTT--CEEEECSSTT
T ss_pred             EEEECCCh----------H-------HHHHHHHHHHHCC--CEEEEcCCcc
Confidence            99977652          1       1345555555666  5788888763

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.17  E-value=0.0013  Score=57.15  Aligned_cols=32  Identities=28%  Similarity=0.392  Sum_probs=27.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTV   36 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~   36 (327)
                      ++||.|.||+|++|+.+++.|.+.. .+|.++.
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~   36 (350)
T 2ep5_A            4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS   36 (350)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence            5789999999999999999998764 5787775

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.16  E-value=0.0013  Score=59.07  Aligned_cols=34  Identities=18%  Similarity=0.206  Sum_probs=30.3

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE   41 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (327)
                      |+|.|+| +|++|..++..|++.|++|++++| ++.
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~-~~~   34 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDV-SST   34 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-CHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEC-CHH
Confidence            4799999 699999999999999999999999 443

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.16  E-value=0.00051  Score=58.25  Aligned_cols=75  Identities=16%  Similarity=0.113  Sum_probs=51.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ..++++|+|+ |.+|+.++..|++.|. +|++.+| ++++...+.....     ...    .+..+.+++.+.+.++|+|
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR-~~~ka~~la~~~~-----~~~----~~~~~~~~~~~~~~~aDiv  208 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANR-TVEKAERLVREGD-----ERR----SAYFSLAEAETRLAEYDII  208 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECS-SHHHHHHHHHHSC-----SSS----CCEECHHHHHHTGGGCSEE
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeC-CHHHHHHHHHHhh-----hcc----CceeeHHHHHhhhccCCEE
Confidence            3678999997 7899999999999997 8999999 5433332221111     000    0122334566777889999


Q ss_pred             EEccCCC
Q 020334           83 IHVAAPI   89 (327)
Q Consensus        83 ih~a~~~   89 (327)
                      |++.+..
T Consensus       209 In~t~~~  215 (297)
T 2egg_A          209 INTTSVG  215 (297)
T ss_dssp             EECSCTT
T ss_pred             EECCCCC
Confidence            9998753

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.12  E-value=0.00044  Score=60.06  Aligned_cols=94  Identities=18%  Similarity=0.177  Sum_probs=54.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC---eEEEEEc-CCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY---FVTTTVR-SDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGC   79 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~   79 (327)
                      |+++|.|.||||++|..|++.|.++++   ++..+.- ++..+.  +. +.     .....+...|   ++    .+.++
T Consensus         1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~--~~-~~-----~~~~~~~~~~---~~----~~~~~   65 (366)
T 3pwk_A            1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKS--LK-FK-----DQDITIEETT---ET----AFEGV   65 (366)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCE--EE-ET-----TEEEEEEECC---TT----TTTTC
T ss_pred             CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCc--ce-ec-----CCCceEeeCC---HH----HhcCC
Confidence            457899999999999999999998765   3343332 111111  11 00     0112222222   11    24689


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS  131 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~  131 (327)
                      |+|+.|.+.          .       .....+..+.+.|  .++|=.|+..
T Consensus        66 Dvvf~a~~~----------~-------~s~~~a~~~~~~G--~~vIDlSa~~   98 (366)
T 3pwk_A           66 DIALFSAGS----------S-------TSAKYAPYAVKAG--VVVVDNTSYF   98 (366)
T ss_dssp             SEEEECSCH----------H-------HHHHHHHHHHHTT--CEEEECSSTT
T ss_pred             CEEEECCCh----------H-------hHHHHHHHHHHCC--CEEEEcCCcc
Confidence            999988762          1       1345555555666  4678888753

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.10  E-value=0.0016  Score=58.69  Aligned_cols=38  Identities=21%  Similarity=0.292  Sum_probs=33.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK   43 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   43 (327)
                      ..+|||+||+|.||..+++.+...|.+|+++++ ++.+.
T Consensus       221 g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~-~~~~~  258 (447)
T 4a0s_A          221 GDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVS-SAQKE  258 (447)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC-CHHHH
Confidence            578999999999999999999999999999988 44333

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=97.09  E-value=0.003  Score=55.78  Aligned_cols=67  Identities=13%  Similarity=0.122  Sum_probs=51.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      +++|+|+|+ |.+|..+++.+.+.|++|++++. .+.....  .        -.-..+..+..|.+.+.++++.+|+|.
T Consensus        14 ~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~-~~~~~~~--~--------~ad~~~~~~~~d~~~l~~~~~~~dvI~   80 (389)
T 3q2o_A           14 GKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDP-TKNSPCA--Q--------VADIEIVASYDDLKAIQHLAEISDVVT   80 (389)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-STTCTTT--T--------TCSEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeC-CCCCchH--H--------hCCceEecCcCCHHHHHHHHHhCCEee
Confidence            578999995 88999999999999999999987 3322110  0        112456689999999999998999874

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.09  E-value=0.00092  Score=58.08  Aligned_cols=95  Identities=12%  Similarity=0.023  Sum_probs=59.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChh---HHHHHhc--C
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPE---SFDAAIA--G   78 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~   78 (327)
                      ..+|||+|| |.+|..+++.+...|+ +|+++++ ++.+......+        +...+ .|..+.+   .+.++..  +
T Consensus       168 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~-~~~~~~~~~~~--------Ga~~~-~~~~~~~~~~~v~~~~~g~g  236 (348)
T 2d8a_A          168 GKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEP-SDFRRELAKKV--------GADYV-INPFEEDVVKEVMDITDGNG  236 (348)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS-CHHHHHHHHHH--------TCSEE-ECTTTSCHHHHHHHHTTTSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC-CHHHHHHHHHh--------CCCEE-ECCCCcCHHHHHHHHcCCCC
Confidence            468999999 9999999999999999 9999998 44333333222        11111 2333322   2333332  5


Q ss_pred             CCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           79 CAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        79 ~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      +|+||++++..         .       .....++.++..   .+++.+++
T Consensus       237 ~D~vid~~g~~---------~-------~~~~~~~~l~~~---G~iv~~g~  268 (348)
T 2d8a_A          237 VDVFLEFSGAP---------K-------ALEQGLQAVTPA---GRVSLLGL  268 (348)
T ss_dssp             EEEEEECSCCH---------H-------HHHHHHHHEEEE---EEEEECCC
T ss_pred             CCEEEECCCCH---------H-------HHHHHHHHHhcC---CEEEEEcc
Confidence            89999998731         1       123445555544   48888775

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.08  E-value=0.0015  Score=56.50  Aligned_cols=95  Identities=14%  Similarity=0.059  Sum_probs=60.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh---hHHHHHhcCCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP---ESFDAAIAGCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~~~d~   81 (327)
                      .++|||+|| |.+|..+++.+...|++|++++| ++.+...+..+        +... ..|..+.   +.+.++..++|+
T Consensus       165 g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~l--------Ga~~-~~d~~~~~~~~~~~~~~~~~d~  233 (339)
T 1rjw_A          165 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDI-GDEKLELAKEL--------GADL-VVNPLKEDAAKFMKEKVGGVHA  233 (339)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECS-CHHHHHHHHHT--------TCSE-EECTTTSCHHHHHHHHHSSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHC--------CCCE-EecCCCccHHHHHHHHhCCCCE
Confidence            578999999 66999999999999999999998 44333322221        1111 1354432   233333357999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      ||++++..         .       .....++.++..+   +++.+++
T Consensus       234 vid~~g~~---------~-------~~~~~~~~l~~~G---~~v~~g~  262 (339)
T 1rjw_A          234 AVVTAVSK---------P-------AFQSAYNSIRRGG---ACVLVGL  262 (339)
T ss_dssp             EEESSCCH---------H-------HHHHHHHHEEEEE---EEEECCC
T ss_pred             EEECCCCH---------H-------HHHHHHHHhhcCC---EEEEecc
Confidence            99998731         1       1234555555543   7887765

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.03  E-value=0.0012  Score=55.21  Aligned_cols=67  Identities=10%  Similarity=0.074  Sum_probs=48.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .++++|+|+ |.+|++++..|.+.|+ +|++.+| ++++...+.         ..+..+     ..+++.+.+.++|+||
T Consensus       117 ~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R-~~~~a~~la---------~~~~~~-----~~~~~~~~~~~aDiVI  180 (277)
T 3don_A          117 DAYILILGA-GGASKGIANELYKIVRPTLTVANR-TMSRFNNWS---------LNINKI-----NLSHAESHLDEFDIII  180 (277)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECS-CGGGGTTCC---------SCCEEE-----CHHHHHHTGGGCSEEE
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeC-CHHHHHHHH---------Hhcccc-----cHhhHHHHhcCCCEEE
Confidence            578999996 8999999999999998 8999999 544333221         122221     3445666677899999


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      ++..
T Consensus       181 naTp  184 (277)
T 3don_A          181 NTTP  184 (277)
T ss_dssp             ECCC
T ss_pred             ECcc
Confidence            8864

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=97.01  E-value=0.0039  Score=54.98  Aligned_cols=74  Identities=11%  Similarity=0.114  Sum_probs=54.6

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--C
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--G   78 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~   78 (327)
                      |..++|+|||+|+ |.+|..+++.+.+.|++|++++. .+.....  ..        .-..+..|..|.+.+.++++  +
T Consensus         7 m~~~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~-~~~~~~~--~~--------~d~~~~~~~~d~~~l~~~~~~~~   74 (391)
T 1kjq_A            7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDR-YADAPAM--HV--------AHRSHVINMLDGDALRRVVELEK   74 (391)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEES-STTCGGG--GG--------SSEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEEC-CCCCchh--hh--------ccceEECCCCCHHHHHHHHHHcC
Confidence            5556789999986 78999999999999999999987 4332211  00        11456678889888888775  7


Q ss_pred             CCEEEEcc
Q 020334           79 CAGVIHVA   86 (327)
Q Consensus        79 ~d~vih~a   86 (327)
                      +|.|+...
T Consensus        75 ~d~v~~~~   82 (391)
T 1kjq_A           75 PHYIVPEI   82 (391)
T ss_dssp             CSEEEECS
T ss_pred             CCEEEECC
Confidence            99988643

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=97.01  E-value=0.0034  Score=55.14  Aligned_cols=69  Identities=17%  Similarity=0.282  Sum_probs=52.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      |++|+|+|+ |.+|..+++.|.+.|++|++++. .+.....  .+        .-..+..|..|.+.+.+++.++|.|+.
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~-~~~~~~~--~~--------~~~~~~~~~~d~~~l~~~~~~~d~v~~   68 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDP-TPRSPAG--QV--------ADEQIVAGFFDSERIEDLVKGSDVTTY   68 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-STTCTTG--GG--------SSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC-CCCCchh--hh--------CceEEECCCCCHHHHHHHHhcCCEEEe
Confidence            468999996 89999999999999999999987 3222111  11        114567889999999888888999875


Q ss_pred             c
Q 020334           85 V   85 (327)
Q Consensus        85 ~   85 (327)
                      .
T Consensus        69 ~   69 (380)
T 3ax6_A           69 D   69 (380)
T ss_dssp             S
T ss_pred             c
Confidence            3

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.01  E-value=0.0024  Score=57.67  Aligned_cols=41  Identities=22%  Similarity=0.242  Sum_probs=34.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL   46 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~   46 (327)
                      ..+|||+||+|-+|...++.+...|.+|+++++ ++.+...+
T Consensus       229 g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~-~~~~~~~~  269 (456)
T 3krt_A          229 GDNVLIWGASGGLGSYATQFALAGGANPICVVS-SPQKAEIC  269 (456)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEEC-CHHHHHHH
Confidence            568999999999999999999999999999988 54444333

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=97.00  E-value=0.00055  Score=61.65  Aligned_cols=119  Identities=13%  Similarity=0.122  Sum_probs=72.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-----CCeEEEEEcCCCCCcchhhhhhCC--CCCCCCeEEEeCCCCChhHHHHHhc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-----GYFVTTTVRSDPEHKKDLSFLTNL--PGASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-----g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      ++||.|+||.+..|.+++..|+.+     +.+|...++ +++.......+...  +......++...     .++.+.++
T Consensus        28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di-~~e~~~~~~~~~~~~l~~~~~~~~I~~t-----~D~~eal~  101 (472)
T 1u8x_X           28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDN-DKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEEAFT  101 (472)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECS-CHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHHHHS
T ss_pred             CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeC-CHHHHHHHHHHHHHHhccCCCCCEEEEE-----CCHHHHHc
Confidence            358999998776688898888887     678999999 54332222111100  000011222211     22456788


Q ss_pred             CCCEEEEccCCCCCCCCchH-------------------HHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           78 GCAGVIHVAAPIDIDGKETE-------------------EVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        78 ~~d~vih~a~~~~~~~~~~~-------------------~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      ++|+||.+++.........+                   -.....|+...+.+++.+++..+-..++.+|-
T Consensus       102 ~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TN  172 (472)
T 1u8x_X          102 DVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSN  172 (472)
T ss_dssp             SCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            99999999875321111110                   12356788889999999999885667776663

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.00  E-value=0.00025  Score=60.63  Aligned_cols=34  Identities=32%  Similarity=0.348  Sum_probs=30.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDP   40 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (327)
                      ||+|.|+|+ |.+|+.++..|++.|++|++++| ++
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r-~~   36 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQ-WP   36 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-CH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEEC-CH
Confidence            578999996 99999999999999999999999 44

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.99  E-value=0.00034  Score=56.60  Aligned_cols=67  Identities=16%  Similarity=0.086  Sum_probs=45.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEE-EEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTT-TVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      |++|.|+| +|.+|+++++.|++.|++|++ .+| +++....+....       ++....   .+    .+.+.++|+||
T Consensus        23 mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r-~~~~~~~l~~~~-------g~~~~~---~~----~~~~~~aDvVi   86 (220)
T 4huj_A           23 MTTYAIIG-AGAIGSALAERFTAAQIPAIIANSR-GPASLSSVTDRF-------GASVKA---VE----LKDALQADVVI   86 (220)
T ss_dssp             SCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTT-CGGGGHHHHHHH-------TTTEEE---CC----HHHHTTSSEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECC-CHHHHHHHHHHh-------CCCccc---Ch----HHHHhcCCEEE
Confidence            57899999 799999999999999999998 777 554443332111       111111   12    22357789999


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      -+.-
T Consensus        87 lavp   90 (220)
T 4huj_A           87 LAVP   90 (220)
T ss_dssp             EESC
T ss_pred             EeCC
Confidence            7763

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=96.97  E-value=0.0035  Score=54.05  Aligned_cols=93  Identities=10%  Similarity=0.054  Sum_probs=56.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC---CeEEEEEcC-CCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG---YFVTTTVRS-DPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      |+||.|.||||++|+.+++.|.+++   .++.++... +......   +.     ...+.+.  |. +++    .+.++|
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~---~~-----~~~i~~~--~~-~~~----~~~~vD   67 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYR---FN-----GKTVRVQ--NV-EEF----DWSQVH   67 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEE---ET-----TEEEEEE--EG-GGC----CGGGCS
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCcee---ec-----CceeEEe--cC-ChH----HhcCCC
Confidence            5789999999999999999999873   467766531 2211111   00     0122222  22 222    235789


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS  131 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~  131 (327)
                      +|+-|.+..                 .....+..+.+.|  .++|-.|+..
T Consensus        68 vVf~a~g~~-----------------~s~~~a~~~~~~G--~~vId~s~~~   99 (336)
T 2r00_A           68 IALFSAGGE-----------------LSAKWAPIAAEAG--VVVIDNTSHF   99 (336)
T ss_dssp             EEEECSCHH-----------------HHHHHHHHHHHTT--CEEEECSSTT
T ss_pred             EEEECCCch-----------------HHHHHHHHHHHcC--CEEEEcCCcc
Confidence            999887621                 1345566666666  4688888763

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.96  E-value=0.00082  Score=56.99  Aligned_cols=65  Identities=17%  Similarity=0.050  Sum_probs=46.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +++|.|+| .|.+|..+++.|++.|++|++.+| +++....+..        .+++.       ..++.++++ +|+||-
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr-~~~~~~~~~~--------~g~~~-------~~~~~~~~~-aDvvi~   76 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDI-RIEAMTPLAE--------AGATL-------ADSVADVAA-ADLIHI   76 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECS-STTTSHHHHH--------TTCEE-------CSSHHHHTT-SSEEEE
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHH--------CCCEE-------cCCHHHHHh-CCEEEE
Confidence            46899999 699999999999999999999999 5544433321        12222       123455666 899887


Q ss_pred             ccC
Q 020334           85 VAA   87 (327)
Q Consensus        85 ~a~   87 (327)
                      +..
T Consensus        77 ~vp   79 (296)
T 3qha_A           77 TVL   79 (296)
T ss_dssp             CCS
T ss_pred             ECC
Confidence            764

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=96.93  E-value=0.0067  Score=50.72  Aligned_cols=33  Identities=24%  Similarity=0.335  Sum_probs=27.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CCeEEEE-Ec
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTT-VR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~-~r   37 (327)
                      +.||.|.|++|-+|+.+++.+.+. +.++.++ +|
T Consensus        21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~   55 (288)
T 3ijp_A           21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVR   55 (288)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCC
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            468999999999999999999865 6776665 44

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.93  E-value=0.00062  Score=57.21  Aligned_cols=76  Identities=21%  Similarity=0.351  Sum_probs=50.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhh-hhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLS-FLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      ..++++|+|+ |.+|++++..|++.|. +|++++| ++++...+. .+...   ...+.....+.   +++.+.+.++|+
T Consensus       126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R-~~~~a~~la~~~~~~---~~~~~i~~~~~---~~l~~~l~~~Di  197 (283)
T 3jyo_A          126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADL-DTSRAQALADVINNA---VGREAVVGVDA---RGIEDVIAAADG  197 (283)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS-SHHHHHHHHHHHHHH---HTSCCEEEECS---TTHHHHHHHSSE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHHHHHHhh---cCCceEEEcCH---HHHHHHHhcCCE
Confidence            3679999997 8999999999999998 6999999 544433322 11110   01122223333   335566777899


Q ss_pred             EEEccC
Q 020334           82 VIHVAA   87 (327)
Q Consensus        82 vih~a~   87 (327)
                      ||++..
T Consensus       198 VInaTp  203 (283)
T 3jyo_A          198 VVNATP  203 (283)
T ss_dssp             EEECSS
T ss_pred             EEECCC
Confidence            998874

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.91  E-value=0.0041  Score=51.26  Aligned_cols=105  Identities=20%  Similarity=0.245  Sum_probs=62.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchh--------------------hhhhCCCCCCCCeEEEe
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDL--------------------SFLTNLPGASERLQIFN   63 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~   63 (327)
                      .++|+|.|+ |.+|+++++.|+..|. ++++++++.- ....+                    ..+... +..-+++.+.
T Consensus        28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v-~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~~~v~~~~  104 (251)
T 1zud_1           28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDV-HLSNLQRQILFTTEDIDRPKSQVSQQRLTQL-NPDIQLTALQ  104 (251)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBC-CGGGTTTCTTCCGGGTTSBHHHHHHHHHHHH-CTTSEEEEEC
T ss_pred             cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCc-ccccCCCCccCChhhCCCHHHHHHHHHHHHH-CCCCEEEEEe
Confidence            468999997 7799999999999996 6777766321 11110                    011110 0011344444


Q ss_pred             CCCCChhHHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce
Q 020334           64 ADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS  131 (327)
Q Consensus        64 ~D~~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~  131 (327)
                      .++ +.+.+.+++.++|+||.+...       .  .       .-..+.++|++.+  +.+|+.+...
T Consensus       105 ~~~-~~~~~~~~~~~~DvVi~~~d~-------~--~-------~r~~l~~~~~~~~--~p~i~~~~~g  153 (251)
T 1zud_1          105 QRL-TGEALKDAVARADVVLDCTDN-------M--A-------TRQEINAACVALN--TPLITASAVG  153 (251)
T ss_dssp             SCC-CHHHHHHHHHHCSEEEECCSS-------H--H-------HHHHHHHHHHHTT--CCEEEEEEEB
T ss_pred             ccC-CHHHHHHHHhcCCEEEECCCC-------H--H-------HHHHHHHHHHHhC--CCEEEEeccc
Confidence            444 345677788889999987531       1  1       1234556666665  4577766543

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=96.91  E-value=0.0072  Score=52.70  Aligned_cols=98  Identities=13%  Similarity=0.044  Sum_probs=62.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCe-EEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHh----c--
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYF-VTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAI----A--   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~----~--   77 (327)
                      ..+|||+|+ |.+|...++.+...|.+ |+++++ ++.+......+ .     ..+.....|..+.+++.+.+    .  
T Consensus       180 g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~-~~~~~~~a~~l-~-----~~~~~~~~~~~~~~~~~~~v~~~t~g~  251 (363)
T 3m6i_A          180 GDPVLICGA-GPIGLITMLCAKAAGACPLVITDI-DEGRLKFAKEI-C-----PEVVTHKVERLSAEESAKKIVESFGGI  251 (363)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEES-CHHHHHHHHHH-C-----TTCEEEECCSCCHHHHHHHHHHHTSSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC-CHHHHHHHHHh-c-----hhcccccccccchHHHHHHHHHHhCCC
Confidence            578999998 99999999999889987 898888 54444444333 1     23333334444444444332    2  


Q ss_pred             CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           78 GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        78 ~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      ++|+||.+.|..         ..       ....++.++..+   +++.++.
T Consensus       252 g~Dvvid~~g~~---------~~-------~~~~~~~l~~~G---~iv~~G~  284 (363)
T 3m6i_A          252 EPAVALECTGVE---------SS-------IAAAIWAVKFGG---KVFVIGV  284 (363)
T ss_dssp             CCSEEEECSCCH---------HH-------HHHHHHHSCTTC---EEEECCC
T ss_pred             CCCEEEECCCCh---------HH-------HHHHHHHhcCCC---EEEEEcc
Confidence            689999998731         11       234455555544   8887764

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=96.91  E-value=0.0013  Score=57.71  Aligned_cols=75  Identities=17%  Similarity=0.116  Sum_probs=53.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+++|+|+|+ |-+|..+++.+...|.+|++++| ++.....+.....     ..+.   .+..+.+.+.+++.++|+||
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~-~~~~l~~~~~~~g-----~~~~---~~~~~~~~l~~~l~~aDvVi  236 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDI-NIDKLRQLDAEFC-----GRIH---TRYSSAYELEGAVKRADLVI  236 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHTT-----TSSE---EEECCHHHHHHHHHHCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeC-CHHHHHHHHHhcC-----CeeE---eccCCHHHHHHHHcCCCEEE
Confidence            3678999998 99999999999999999999999 4433222222110     1121   22335566777888899999


Q ss_pred             EccCC
Q 020334           84 HVAAP   88 (327)
Q Consensus        84 h~a~~   88 (327)
                      .+++.
T Consensus       237 ~~~~~  241 (377)
T 2vhw_A          237 GAVLV  241 (377)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            98864

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.90  E-value=0.0011  Score=54.30  Aligned_cols=32  Identities=13%  Similarity=0.082  Sum_probs=27.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEE-EEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTT-TVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~-~~r   37 (327)
                      |+||.|+|+ |.+|+.+++.+.++++++.+ ++|
T Consensus         3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~   35 (243)
T 3qy9_A            3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIEN   35 (243)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECS
T ss_pred             ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEec
Confidence            578999999 99999999999988667665 455

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.90  E-value=0.001  Score=58.26  Aligned_cols=71  Identities=15%  Similarity=0.194  Sum_probs=48.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCC---CCcchhhhhhCCCCCCCCeEEEeCCCCC--hhHHHHHhcCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDP---EHKKDLSFLTNLPGASERLQIFNADLND--PESFDAAIAGC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~   79 (327)
                      .++|||+|| |.+|..+++.+...|++|+++++ ++   .+......+        +...+  | .+  .+.+.+.-.++
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~-~~~~~~~~~~~~~~--------ga~~v--~-~~~~~~~~~~~~~~~  247 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANR-REPTEVEQTVIEET--------KTNYY--N-SSNGYDKLKDSVGKF  247 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEES-SCCCHHHHHHHHHH--------TCEEE--E-CTTCSHHHHHHHCCE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeC-CccchHHHHHHHHh--------CCcee--c-hHHHHHHHHHhCCCC
Confidence            679999999 99999999999999999999999 43   232222221        23333  4 33  22333311469


Q ss_pred             CEEEEccCC
Q 020334           80 AGVIHVAAP   88 (327)
Q Consensus        80 d~vih~a~~   88 (327)
                      |+||++++.
T Consensus       248 d~vid~~g~  256 (366)
T 2cdc_A          248 DVIIDATGA  256 (366)
T ss_dssp             EEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.86  E-value=0.0005  Score=58.54  Aligned_cols=37  Identities=19%  Similarity=0.147  Sum_probs=31.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH   42 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   42 (327)
                      ++++|.|+| .|.+|+.+++.|++.|++|++.+| ++..
T Consensus         6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr-~~~~   42 (303)
T 3g0o_A            6 TDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADL-NPQA   42 (303)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEEC-CHHH
Confidence            457899998 599999999999999999999999 5433

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.85  E-value=0.0066  Score=50.96  Aligned_cols=105  Identities=17%  Similarity=0.183  Sum_probs=63.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCC-----------------Ccch-hhhhhCCCCCCCCeEEEeCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPE-----------------HKKD-LSFLTNLPGASERLQIFNAD   65 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-----------------~~~~-~~~~~~~~~~~~~~~~~~~D   65 (327)
                      ..+|+|.|+ |.+|+++++.|+..|. ++++++.+.-+                 +... ...+... +..-+++.+..+
T Consensus        36 ~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~i-NP~v~v~~~~~~  113 (292)
T 3h8v_A           36 TFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNI-NPDVLFEVHNYN  113 (292)
T ss_dssp             GCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHH-CTTSEEEEECCC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhh-CCCcEEEEeccc
Confidence            468999996 9999999999999984 78888773211                 0000 0111111 111245666777


Q ss_pred             CCChhHHHHHh-----------cCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           66 LNDPESFDAAI-----------AGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        66 ~~d~~~~~~~~-----------~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      +++.+.+..++           +++|+||.+.-.       ..         .-..+.++|.+.+  +.+|+.+.
T Consensus       114 l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn-------~~---------~R~~in~~c~~~~--~Pli~~gv  170 (292)
T 3h8v_A          114 ITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDN-------FE---------ARMTINTACNELG--QTWMESGV  170 (292)
T ss_dssp             TTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS-------HH---------HHHHHHHHHHHHT--CCEEEEEE
T ss_pred             CCcHHHHHHHhhhhcccccccCCCCCEEEECCcc-------hh---------hhhHHHHHHHHhC--CCEEEeee
Confidence            77666666654           579999977531       11         1134566777776  45666543

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.85  E-value=0.0093  Score=51.75  Aligned_cols=75  Identities=21%  Similarity=0.161  Sum_probs=48.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCC--CCChhHHHHHh-----c
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNAD--LNDPESFDAAI-----A   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D--~~d~~~~~~~~-----~   77 (327)
                      ..+|||+|+ |-+|..+++.+...|.+|+++++ ++.+...+..+-      .. ..+..+  -...+.+.+..     .
T Consensus       169 g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~-~~~~~~~~~~lG------a~-~~~~~~~~~~~~~~i~~~~~~~~g~  239 (352)
T 1e3j_A          169 GTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTAR-SPRRLEVAKNCG------AD-VTLVVDPAKEEESSIIERIRSAIGD  239 (352)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHTT------CS-EEEECCTTTSCHHHHHHHHHHHSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcC-CHHHHHHHHHhC------CC-EEEcCcccccHHHHHHHHhccccCC
Confidence            578999997 99999999999889999999988 443333332221      11 222211  22234455544     3


Q ss_pred             CCCEEEEccCC
Q 020334           78 GCAGVIHVAAP   88 (327)
Q Consensus        78 ~~d~vih~a~~   88 (327)
                      ++|+||++++.
T Consensus       240 g~D~vid~~g~  250 (352)
T 1e3j_A          240 LPNVTIDCSGN  250 (352)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            69999999873

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.85  E-value=0.0021  Score=55.90  Aligned_cols=74  Identities=19%  Similarity=0.154  Sum_probs=52.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCC------------------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL------------------   66 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~------------------   66 (327)
                      ..+|+|+|+ |-+|..+++.|...|.+|++++| ++.....+..+        +.+++..+.                  
T Consensus       184 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~-~~~~l~~~~~l--------Ga~~~~l~~~~~~~~gya~~~~~~~~~  253 (381)
T 3p2y_A          184 PASALVLGV-GVAGLQALATAKRLGAKTTGYDV-RPEVAEQVRSV--------GAQWLDLGIDAAGEGGYARELSEAERA  253 (381)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHHTCEEEEECS-SGGGHHHHHHT--------TCEECCCC-------------CHHHHH
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHc--------CCeEEeccccccccccchhhhhHHHHh
Confidence            568999997 99999999999999999999999 54443333322        233433221                  


Q ss_pred             CChhHHHHHhcCCCEEEEccCC
Q 020334           67 NDPESFDAAIAGCAGVIHVAAP   88 (327)
Q Consensus        67 ~d~~~~~~~~~~~d~vih~a~~   88 (327)
                      .+.+.+.+.+.++|+||.++..
T Consensus       254 ~~~~~l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          254 QQQQALEDAITKFDIVITTALV  275 (381)
T ss_dssp             HHHHHHHHHHTTCSEEEECCCC
T ss_pred             hhHHHHHHHHhcCCEEEECCCC
Confidence            1234677788899999988743

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.85  E-value=0.007  Score=49.51  Aligned_cols=158  Identities=11%  Similarity=0.047  Sum_probs=87.4

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----CC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----GC   79 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~   79 (327)
                      +||.|+|++|-+|+.+++.+.+. ++++.++..... .   +..+..     .... +..|.+.++...+.+.     +.
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~-d---l~~~~~-----~~~D-vvIDfT~p~a~~~~~~~a~~~g~   70 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGD-P---LSLLTD-----GNTE-VVIDFTHPDVVMGNLEFLIDNGI   70 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTC-C---THHHHH-----TTCC-EEEECSCTTTHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCC-C---HHHHhc-----cCCc-EEEEccChHHHHHHHHHHHHcCC
Confidence            47999999999999999999866 899887665232 1   111111     0112 5567777766654432     56


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeec----------CC-CCCcccCCCC
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFS----------GK-DVDMLDETFW  148 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~----------~~-~~~~~~E~~~  148 (327)
                      ++|+-..|.   +  .   +.       ...|.+++++.. ...+++.+..+. |..          .. .+.-+-|...
T Consensus        71 ~~VigTTG~---~--~---e~-------~~~l~~aa~~~~-~~~vv~a~N~si-Gv~ll~~l~~~aa~~~~dieIiE~HH  133 (245)
T 1p9l_A           71 HAVVGTTGF---T--A---ER-------FQQVESWLVAKP-NTSVLIAPNFAI-GAVLSMHFAKQAARFFDSAEVIELHH  133 (245)
T ss_dssp             EEEECCCCC---C--H---HH-------HHHHHHHHHTST-TCEEEECSCCCH-HHHHHHHHHHHHGGGCSEEEEEEEEC
T ss_pred             CEEEcCCCC---C--H---HH-------HHHHHHHHHhCC-CCCEEEECCccH-HHHHHHHHHHHHHhhcCCEEEEECcc
Confidence            777755442   1  1   11       124555566542 135666665432 100          00 1122233322


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHH-------------------HcCCcEEEEecCceecCC
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAE-------------------EHGLDLVTLIPSFVVGPF  198 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~-------------------~~~~~~~i~R~~~v~G~~  198 (327)
                      .        .+-..|-|.++..+|.+......                   ..++.+..+|.+.+.|..
T Consensus       134 ~--------~K~DaPSGTA~~lae~i~~~~~~~~~~~~~~~~~~~g~r~~~~~~i~i~s~R~g~ivg~h  194 (245)
T 1p9l_A          134 P--------HKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQ  194 (245)
T ss_dssp             T--------TCCSSSCHHHHHHHHHHHHHTTTSCCCCCCCCSCCTTTTCEEETTEEEEEEECTTCCEEE
T ss_pred             c--------CCCCCCCHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCcceEEEEECCCCCeEE
Confidence            1        12234568888888877543210                   015778889999998863

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=96.84  E-value=0.0064  Score=53.01  Aligned_cols=70  Identities=17%  Similarity=0.227  Sum_probs=50.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCC-CChhHHHHHhcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL-NDPESFDAAIAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~d~~~~~~~~~~~d~vi   83 (327)
                      ||+|+|+|| |..|..+++.+.+.|++|++++. ++.....  .+        --+++..|. .|.+.+..+.+++|.|+
T Consensus         1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~-~~~~~~~--~~--------aD~~~~~~~~~d~~~~~~~~~~~D~v~   68 (363)
T 4ffl_A            1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDK-NPQALIR--NY--------ADEFYCFDVIKEPEKLLELSKRVDAVL   68 (363)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CTTCTTT--TT--------SSEEEECCTTTCHHHHHHHHTSSSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC-CCCChhH--hh--------CCEEEECCCCcCHHHHHHHhcCCCEEE
Confidence            689999995 89999999999999999999988 4432211  00        114455554 46667777778899887


Q ss_pred             Ecc
Q 020334           84 HVA   86 (327)
Q Consensus        84 h~a   86 (327)
                      -..
T Consensus        69 ~~~   71 (363)
T 4ffl_A           69 PVN   71 (363)
T ss_dssp             ECC
T ss_pred             ECC
Confidence            543

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=96.81  E-value=0.0061  Score=54.57  Aligned_cols=72  Identities=13%  Similarity=0.139  Sum_probs=53.6

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCC
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCA   80 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d   80 (327)
                      .++|+|||+|+ |.+|..+++.+.+.|++|++++. .+.....  ..        --..+..|..|.+.+.++++  ++|
T Consensus        17 ~~~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~-~~~~~~~--~~--------ad~~~~~~~~d~~~l~~~~~~~~~d   84 (433)
T 2dwc_A           17 DSAQKILLLGS-GELGKEIAIEAQRLGVEVVAVDR-YANAPAM--QV--------AHRSYVGNMMDKDFLWSVVEREKPD   84 (433)
T ss_dssp             TTCCEEEEESC-SHHHHHHHHHHHHTTCEEEEEES-STTCHHH--HH--------SSEEEESCTTCHHHHHHHHHHHCCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEC-CCCChhh--hh--------cceEEECCCCCHHHHHHHHHHcCCC
Confidence            34679999997 89999999999999999999987 4332211  11        11456688889888888775  799


Q ss_pred             EEEEcc
Q 020334           81 GVIHVA   86 (327)
Q Consensus        81 ~vih~a   86 (327)
                      .|+...
T Consensus        85 ~V~~~~   90 (433)
T 2dwc_A           85 AIIPEI   90 (433)
T ss_dssp             EEEECS
T ss_pred             EEEECc
Confidence            988654

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.79  E-value=0.0024  Score=55.40  Aligned_cols=75  Identities=16%  Similarity=0.017  Sum_probs=48.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHh-cCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAI-AGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~d~vi   83 (327)
                      ..+|||+||+|-+|..+++.+...|.+|+++++ ++.+...+..+-       --..+..+-...+.+.++- .++|+|+
T Consensus       151 g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~-~~~~~~~~~~lG-------a~~vi~~~~~~~~~~~~~~~~g~Dvv~  222 (346)
T 3fbg_A          151 GKTLLIINGAGGVGSIATQIAKAYGLRVITTAS-RNETIEWTKKMG-------ADIVLNHKESLLNQFKTQGIELVDYVF  222 (346)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC-SHHHHHHHHHHT-------CSEEECTTSCHHHHHHHHTCCCEEEEE
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHhcC-------CcEEEECCccHHHHHHHhCCCCccEEE
Confidence            578999999999999999999999999999988 443333333321       1122211111122333332 2589999


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      +|++
T Consensus       223 d~~g  226 (346)
T 3fbg_A          223 CTFN  226 (346)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            9987

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.77  E-value=0.0045  Score=54.33  Aligned_cols=75  Identities=23%  Similarity=0.220  Sum_probs=52.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCC----------------CCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNAD----------------LND   68 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D----------------~~d   68 (327)
                      ..+|+|+|+ |-+|..+++.|...|.+|++.++ ++.....+..+        +.+++..+                +++
T Consensus       190 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~-~~~~l~~~~~~--------G~~~~~~~~~~~~d~~~~~~ya~e~s~  259 (405)
T 4dio_A          190 AAKIFVMGA-GVAGLQAIATARRLGAVVSATDV-RPAAKEQVASL--------GAKFIAVEDEEFKAAETAGGYAKEMSG  259 (405)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-STTHHHHHHHT--------TCEECCCCC-----------------C
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHc--------CCceeecccccccccccccchhhhcch
Confidence            468999997 99999999999999999999999 55443333322        22332221                222


Q ss_pred             ------hhHHHHHhcCCCEEEEccCCC
Q 020334           69 ------PESFDAAIAGCAGVIHVAAPI   89 (327)
Q Consensus        69 ------~~~~~~~~~~~d~vih~a~~~   89 (327)
                            .+.+.++++++|+||.++...
T Consensus       260 ~~~~~~~~~l~e~l~~aDVVI~tvlip  286 (405)
T 4dio_A          260 EYQVKQAALVAEHIAKQDIVITTALIP  286 (405)
T ss_dssp             HHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred             hhhhhhHhHHHHHhcCCCEEEECCcCC
Confidence                  246788888999999987543

>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2

Probab=96.75  E-value=0.0017  Score=58.28  Aligned_cols=119  Identities=12%  Similarity=0.032  Sum_probs=72.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-----CCeEEEEEcCCC--CCcchhhhhhCCC--CCCCCeEEEeCCCCChhHHHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-----GYFVTTTVRSDP--EHKKDLSFLTNLP--GASERLQIFNADLNDPESFDAA   75 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-----g~~V~~~~r~~~--~~~~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~   75 (327)
                      ++||.|+||.+..|.+++..|+.+     +.+|...++ ++  +.......+....  ......++...  .   ++.+.
T Consensus         7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di-~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t--~---D~~ea   80 (450)
T 1s6y_A            7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDI-PEGKEKLEIVGALAKRMVEKAGVPIEIHLT--L---DRRRA   80 (450)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECC-GGGHHHHHHHHHHHHHHHHHTTCCCEEEEE--S---CHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEc-CCChHHHHHHHHHHHHHHhhcCCCcEEEEe--C---CHHHH
Confidence            468999999776699999989874     568999999 54  3322211110000  00112222221  1   24567


Q ss_pred             hcCCCEEEEccCCCCCCCCchH-------------------HHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           76 IAGCAGVIHVAAPIDIDGKETE-------------------EVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        76 ~~~~d~vih~a~~~~~~~~~~~-------------------~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      ++++|+||.+++.........+                   -.....|+...+.+++.+++..+-..++.+|-
T Consensus        81 l~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tN  153 (450)
T 1s6y_A           81 LDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTN  153 (450)
T ss_dssp             HTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             hCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            8899999999975321100000                   02356788889999999999885667776663

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.75  E-value=0.0033  Score=54.48  Aligned_cols=72  Identities=21%  Similarity=0.170  Sum_probs=48.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh-hHHHHHhc--CCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP-ESFDAAIA--GCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~--~~d~   81 (327)
                      ..+|||+||+|.+|..+++.+...|.+|+++ + ++.+...+..+        +...+. +-.+. +.+.++..  ++|+
T Consensus       151 g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~-~~~~~~~~~~l--------Ga~~i~-~~~~~~~~~~~~~~~~g~D~  219 (343)
T 3gaz_A          151 GQTVLIQGGGGGVGHVAIQIALARGARVFAT-A-RGSDLEYVRDL--------GATPID-ASREPEDYAAEHTAGQGFDL  219 (343)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-E-CHHHHHHHHHH--------TSEEEE-TTSCHHHHHHHHHTTSCEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-e-CHHHHHHHHHc--------CCCEec-cCCCHHHHHHHHhcCCCceE
Confidence            5789999999999999999999999999998 6 43333333222        223332 22222 23333333  6899


Q ss_pred             EEEccC
Q 020334           82 VIHVAA   87 (327)
Q Consensus        82 vih~a~   87 (327)
                      ||+++|
T Consensus       220 vid~~g  225 (343)
T 3gaz_A          220 VYDTLG  225 (343)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999988

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=96.75  E-value=0.004  Score=55.76  Aligned_cols=80  Identities=16%  Similarity=0.148  Sum_probs=48.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEE------EeCCCCChhHHHHHhcCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQI------FNADLNDPESFDAAIAGC   79 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~------~~~D~~d~~~~~~~~~~~   79 (327)
                      -+|.|+| +|++|..++..|++.|++|++.+| ++.+...+..-.. +.-.+++.-      ..+.+.-..++.+.++++
T Consensus         9 ~~~~vIG-lG~vG~~~A~~La~~G~~V~~~D~-~~~kv~~l~~g~~-~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~a   85 (446)
T 4a7p_A            9 VRIAMIG-TGYVGLVSGACFSDFGHEVVCVDK-DARKIELLHQNVM-PIYEPGLDALVASNVKAGRLSFTTDLAEGVKDA   85 (446)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CSTTHHHHTTTCC-SSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTC
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHhcCCC-CccCCCHHHHHHhhcccCCEEEECCHHHHHhcC
Confidence            4789999 599999999999999999999999 5554443322100 000011000      001111112355667789


Q ss_pred             CEEEEccCC
Q 020334           80 AGVIHVAAP   88 (327)
Q Consensus        80 d~vih~a~~   88 (327)
                      |+||-|.+.
T Consensus        86 Dvvii~Vpt   94 (446)
T 4a7p_A           86 DAVFIAVGT   94 (446)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEEEcCC
Confidence            999988653

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.74  E-value=0.0017  Score=55.44  Aligned_cols=66  Identities=26%  Similarity=0.285  Sum_probs=46.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      ||+|.|+| .|.+|..+++.|++.|++|++.+| ++.....+..        .+++.       ..++.++++++|+||-
T Consensus        21 m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr-~~~~~~~l~~--------~g~~~-------~~~~~~~~~~aDvvi~   83 (310)
T 3doj_A           21 MMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNR-TLSKCDELVE--------HGASV-------CESPAEVIKKCKYTIA   83 (310)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SGGGGHHHHH--------TTCEE-------CSSHHHHHHHCSEEEE
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHH--------CCCeE-------cCCHHHHHHhCCEEEE
Confidence            57899998 599999999999999999999999 5444333321        12221       1224455566788887


Q ss_pred             ccC
Q 020334           85 VAA   87 (327)
Q Consensus        85 ~a~   87 (327)
                      +..
T Consensus        84 ~vp   86 (310)
T 3doj_A           84 MLS   86 (310)
T ss_dssp             CCS
T ss_pred             EcC
Confidence            653

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.74  E-value=0.0046  Score=51.37  Aligned_cols=57  Identities=14%  Similarity=0.196  Sum_probs=47.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+++++|+|+++.+|+.++..|++.|.+|++..|+.                              ..+.+.++++|+||
T Consensus       159 ~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t------------------------------~~L~~~~~~ADIVI  208 (285)
T 3p2o_A          159 EGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT------------------------------KDLSLYTRQADLII  208 (285)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------------------------SCHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc------------------------------hhHHHHhhcCCEEE
Confidence            478999999999999999999999999999886611                              12567788999999


Q ss_pred             EccCCCC
Q 020334           84 HVAAPID   90 (327)
Q Consensus        84 h~a~~~~   90 (327)
                      .+.+...
T Consensus       209 ~Avg~p~  215 (285)
T 3p2o_A          209 VAAGCVN  215 (285)
T ss_dssp             ECSSCTT
T ss_pred             ECCCCCC
Confidence            9887543

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=96.73  E-value=0.013  Score=50.93  Aligned_cols=95  Identities=17%  Similarity=0.119  Sum_probs=53.6

Q ss_pred             CCeEEEeCCcchhHHHHHHH-HHHCCC---eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMR-LLDHGY---FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~-L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      |+||.|.||||++|+.+++. |.++++   ++..+..++...  .+..+.       +......|..+++.    +.++|
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~--~v~~~~-------g~~i~~~~~~~~~~----~~~~D   67 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ--AAPSFG-------GTTGTLQDAFDLEA----LKALD   67 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS--BCCGGG-------TCCCBCEETTCHHH----HHTCS
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCC--CccccC-------CCceEEEecCChHH----hcCCC
Confidence            36899999999999999994 554543   455555522111  111110       11222233444444    35899


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCcc-EEEEeccc
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVK-RFVYTSSG  130 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~v~~SS~  130 (327)
                      +||.|.+.                 .....++..+.+.| ++ .+|=.||.
T Consensus        68 vVf~a~g~-----------------~~s~~~a~~~~~~G-~k~vVID~ss~  100 (367)
T 1t4b_A           68 IIVTCQGG-----------------DYTNEIYPKLRESG-WQGYWIDAASS  100 (367)
T ss_dssp             EEEECSCH-----------------HHHHHHHHHHHHTT-CCCEEEECSST
T ss_pred             EEEECCCc-----------------hhHHHHHHHHHHCC-CCEEEEcCChh
Confidence            99988762                 12345566666666 43 45555553

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=96.70  E-value=0.0025  Score=55.32  Aligned_cols=33  Identities=21%  Similarity=0.224  Sum_probs=26.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r   37 (327)
                      +.+|.|.||||++|..|++.|.+.. .++..+..
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S   40 (359)
T 4dpk_A            7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAG   40 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEE
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEEC
Confidence            4689999999999999999888764 46665544

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=96.70  E-value=0.0025  Score=55.32  Aligned_cols=33  Identities=21%  Similarity=0.224  Sum_probs=26.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r   37 (327)
                      +.+|.|.||||++|..|++.|.+.. .++..+..
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S   40 (359)
T 4dpl_A            7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAG   40 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEE
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEEC
Confidence            4689999999999999999888764 46665544

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=96.70  E-value=0.0026  Score=57.43  Aligned_cols=35  Identities=23%  Similarity=0.302  Sum_probs=31.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CC-eEEEEEcCCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GY-FVTTTVRSDPE   41 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~   41 (327)
                      +|+|.|+| +|++|..++..|++. |+ +|++.+| ++.
T Consensus        18 ~mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~-~~~   54 (478)
T 3g79_A           18 IKKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQR-NSK   54 (478)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECC-CCT
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEEC-Chh
Confidence            56899999 599999999999999 99 9999999 544

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.69  E-value=0.00069  Score=57.19  Aligned_cols=78  Identities=10%  Similarity=0.106  Sum_probs=47.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhh-hhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLS-FLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ..++++|||++ .+|+++++.|++.| +|++.+| +.++...+. .+....  .... .+..|+.+.   .+.+.++|+|
T Consensus       127 ~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r-~~~~~~~l~~~~~~~~--~~~~-~~~~d~~~~---~~~~~~~Dil  197 (287)
T 1nvt_A          127 KDKNIVIYGAG-GAARAVAFELAKDN-NIIIANR-TVEKAEALAKEIAEKL--NKKF-GEEVKFSGL---DVDLDGVDII  197 (287)
T ss_dssp             CSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECS-SHHHHHHHHHHHHHHH--TCCH-HHHEEEECT---TCCCTTCCEE
T ss_pred             CCCEEEEECch-HHHHHHHHHHHHCC-CEEEEEC-CHHHHHHHHHHHhhhc--cccc-ceeEEEeeH---HHhhCCCCEE
Confidence            35789999985 99999999999999 9999999 433322221 111000  0000 011233331   2345678999


Q ss_pred             EEccCCCC
Q 020334           83 IHVAAPID   90 (327)
Q Consensus        83 ih~a~~~~   90 (327)
                      |++++...
T Consensus       198 Vn~ag~~~  205 (287)
T 1nvt_A          198 INATPIGM  205 (287)
T ss_dssp             EECSCTTC
T ss_pred             EECCCCCC
Confidence            99998543

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.69  E-value=0.006  Score=53.68  Aligned_cols=72  Identities=21%  Similarity=0.147  Sum_probs=49.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCC-----------------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN-----------------   67 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----------------   67 (327)
                      .++|+|+|+ |-+|..+++.+...|.+|++.+| ++........+        +.+++..|..                 
T Consensus       172 g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~-~~~~~~~~~~~--------Ga~~~~i~~~~~~~~~~~~~~~~~~s~  241 (384)
T 1l7d_A          172 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDV-RAATKEQVESL--------GGKFITVDDEAMKTAETAGGYAKEMGE  241 (384)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-CSTTHHHHHHT--------TCEECCC--------------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHc--------CCeEEeecccccccccccccchhhcCH
Confidence            578999995 99999999999999999999999 54443333221        1222211110                 


Q ss_pred             -----ChhHHHHHhcCCCEEEEcc
Q 020334           68 -----DPESFDAAIAGCAGVIHVA   86 (327)
Q Consensus        68 -----d~~~~~~~~~~~d~vih~a   86 (327)
                           ..+.+.+++.++|+||+++
T Consensus       242 ~~~~~~~~~l~~~~~~aDvVi~~~  265 (384)
T 1l7d_A          242 EFRKKQAEAVLKELVKTDIAITTA  265 (384)
T ss_dssp             ---CCHHHHHHHHHTTCSEEEECC
T ss_pred             HHHhhhHHHHHHHhCCCCEEEECC
Confidence                 1234777788999999988

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.69  E-value=0.00098  Score=56.54  Aligned_cols=67  Identities=24%  Similarity=0.338  Sum_probs=45.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      |+|+|.|+| +|.+|..+++.|.+.|++|++.+| ++.....+.   .     .++..    ..+   +.+++.++|+||
T Consensus         4 M~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~-~~~~~~~~~---~-----~g~~~----~~~---~~~~~~~~D~vi   66 (299)
T 1vpd_A            4 MTMKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDR-NPEAIADVI---A-----AGAET----AST---AKAIAEQCDVII   66 (299)
T ss_dssp             --CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-CHHHHHHHH---H-----TTCEE----CSS---HHHHHHHCSEEE
T ss_pred             ccceEEEEC-chHHHHHHHHHHHhCCCEEEEEeC-CHHHHHHHH---H-----CCCee----cCC---HHHHHhCCCEEE
Confidence            457899999 699999999999999999999988 443322221   1     12221    122   344556789999


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      .+..
T Consensus        67 ~~v~   70 (299)
T 1vpd_A           67 TMLP   70 (299)
T ss_dssp             ECCS
T ss_pred             EECC
Confidence            8764

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=96.68  E-value=0.0096  Score=44.07  Aligned_cols=33  Identities=21%  Similarity=0.355  Sum_probs=29.2

Q ss_pred             CCeEEEeCCc---chhHHHHHHHHHHCCCeEEEEEc
Q 020334            5 KGKVCVTGGT---GFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGat---G~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .++|.|+|+|   |-+|..+++.|.+.|++|+.+++
T Consensus        14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp   49 (138)
T 1y81_A           14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNP   49 (138)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred             CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCC
Confidence            5789999997   89999999999999999777655

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.64  E-value=0.0019  Score=54.43  Aligned_cols=65  Identities=23%  Similarity=0.295  Sum_probs=45.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      |+|.|+| +|.+|+.+++.|++.|++|++.+| ++.....+..        .++..       ..++.++++++|+||-|
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr-~~~~~~~~~~--------~g~~~-------~~~~~~~~~~aDvvi~~   64 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNR-SPEKAEELAA--------LGAER-------AATPCEVVESCPVTFAM   64 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SGGGGHHHHH--------TTCEE-------CSSHHHHHHHCSEEEEC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcC-CHHHHHHHHH--------CCCee-------cCCHHHHHhcCCEEEEE
Confidence            6899999 599999999999999999999999 5444333321        12221       12344556668888876


Q ss_pred             cC
Q 020334           86 AA   87 (327)
Q Consensus        86 a~   87 (327)
                      ..
T Consensus        65 vp   66 (287)
T 3pef_A           65 LA   66 (287)
T ss_dssp             CS
T ss_pred             cC
Confidence            54

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=96.64  E-value=0.0035  Score=53.64  Aligned_cols=66  Identities=15%  Similarity=0.146  Sum_probs=47.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+++|.|+| .|-||+.+++.|...|++|++.+| ++......          .  ..+.     ..++.++++++|+|+
T Consensus       136 ~gktvGIiG-lG~IG~~vA~~l~~~G~~V~~~dr-~~~~~~~~----------~--~~~~-----~~~l~ell~~aDvV~  196 (324)
T 3evt_A          136 TGQQLLIYG-TGQIGQSLAAKASALGMHVIGVNT-TGHPADHF----------H--ETVA-----FTATADALATANFIV  196 (324)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-SCCCCTTC----------S--EEEE-----GGGCHHHHHHCSEEE
T ss_pred             cCCeEEEEC-cCHHHHHHHHHHHhCCCEEEEECC-CcchhHhH----------h--hccc-----cCCHHHHHhhCCEEE
Confidence            468999999 599999999999999999999999 43322111          0  1111     234566777899988


Q ss_pred             EccCC
Q 020334           84 HVAAP   88 (327)
Q Consensus        84 h~a~~   88 (327)
                      .+...
T Consensus       197 l~lPl  201 (324)
T 3evt_A          197 NALPL  201 (324)
T ss_dssp             ECCCC
T ss_pred             EcCCC
Confidence            77643

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.64  E-value=0.0028  Score=55.12  Aligned_cols=35  Identities=23%  Similarity=0.054  Sum_probs=31.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE   41 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (327)
                      +|+|.|+|+ |.+|+.++..|.+.|++|++++| ++.
T Consensus         4 ~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r-~~~   38 (359)
T 1bg6_A            4 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDI-DAQ   38 (359)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-CHH
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeC-CHH
Confidence            468999996 99999999999999999999998 443

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.64  E-value=0.0085  Score=51.82  Aligned_cols=69  Identities=16%  Similarity=0.167  Sum_probs=49.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+++|.|+| .|-||+.+++.|...|.+|++.+| .+.........        +++.+       +++.++++++|+|+
T Consensus       163 ~gktvGIIG-~G~IG~~vA~~l~~~G~~V~~~dr-~~~~~~~~~~~--------g~~~~-------~~l~ell~~aDvV~  225 (351)
T 3jtm_A          163 EGKTIGTVG-AGRIGKLLLQRLKPFGCNLLYHDR-LQMAPELEKET--------GAKFV-------EDLNEMLPKCDVIV  225 (351)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGCCEEEEECS-SCCCHHHHHHH--------CCEEC-------SCHHHHGGGCSEEE
T ss_pred             cCCEEeEEE-eCHHHHHHHHHHHHCCCEEEEeCC-CccCHHHHHhC--------CCeEc-------CCHHHHHhcCCEEE
Confidence            468999999 599999999999999999999998 43232222111        22221       24677888899998


Q ss_pred             EccCCC
Q 020334           84 HVAAPI   89 (327)
Q Consensus        84 h~a~~~   89 (327)
                      .+....
T Consensus       226 l~~Plt  231 (351)
T 3jtm_A          226 INMPLT  231 (351)
T ss_dssp             ECSCCC
T ss_pred             ECCCCC
Confidence            777543

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.62  E-value=0.0041  Score=53.09  Aligned_cols=69  Identities=16%  Similarity=0.127  Sum_probs=46.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHH-HhcCCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDA-AIAGCA   80 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d   80 (327)
                      |.++|.|+| .|.+|..+++.|.+.|+  +|++.+| ++........   .    .-+.....|      +.+ ++.++|
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr-~~~~~~~a~~---~----G~~~~~~~~------~~~~~~~~aD   96 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDI-NPESISKAVD---L----GIIDEGTTS------IAKVEDFSPD   96 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECS-CHHHHHHHHH---T----TSCSEEESC------TTGGGGGCCS
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHH---C----CCcchhcCC------HHHHhhccCC
Confidence            457999999 69999999999999999  9999999 4433222211   1    111111122      233 567899


Q ss_pred             EEEEccC
Q 020334           81 GVIHVAA   87 (327)
Q Consensus        81 ~vih~a~   87 (327)
                      +||-+..
T Consensus        97 vVilavp  103 (314)
T 3ggo_A           97 FVMLSSP  103 (314)
T ss_dssp             EEEECSC
T ss_pred             EEEEeCC
Confidence            9997764

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=96.62  E-value=0.00069  Score=58.04  Aligned_cols=34  Identities=9%  Similarity=-0.072  Sum_probs=31.5

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEc
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVR   37 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r   37 (327)
                      .|+++|.|+| +|.+|..+++.|++.| ++|++.+|
T Consensus        22 ~M~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr   56 (317)
T 4ezb_A           22 SMMTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDL   56 (317)
T ss_dssp             TSCCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECG
T ss_pred             ccCCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeC
Confidence            3678999999 6999999999999999 99999999

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=96.61  E-value=0.0047  Score=54.89  Aligned_cols=34  Identities=18%  Similarity=0.117  Sum_probs=29.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE   41 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (327)
                      +|+|.|+| +|++|..++..|++ |++|++.+| ++.
T Consensus        36 ~mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~-~~~   69 (432)
T 3pid_A           36 FMKITISG-TGYVGLSNGVLIAQ-NHEVVALDI-VQA   69 (432)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHT-TSEEEEECS-CHH
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHc-CCeEEEEec-CHH
Confidence            56899999 59999999999988 999999999 443

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.61  E-value=0.0011  Score=55.94  Aligned_cols=66  Identities=24%  Similarity=0.251  Sum_probs=45.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      |++|.|+| .|.+|+.+++.|++.|++|++.+| ++++...+...        +++.    .   .++.++++++|+||-
T Consensus         1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr-~~~~~~~~~~~--------g~~~----~---~~~~~~~~~advvi~   63 (287)
T 3pdu_A            1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNR-NPAKCAPLVAL--------GARQ----A---SSPAEVCAACDITIA   63 (287)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECS-SGGGGHHHHHH--------TCEE----C---SCHHHHHHHCSEEEE
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcC-CHHHHHHHHHC--------CCee----c---CCHHHHHHcCCEEEE
Confidence            35799998 699999999999999999999999 55444333221        2221    1   124445566788887


Q ss_pred             ccC
Q 020334           85 VAA   87 (327)
Q Consensus        85 ~a~   87 (327)
                      +..
T Consensus        64 ~v~   66 (287)
T 3pdu_A           64 MLA   66 (287)
T ss_dssp             CCS
T ss_pred             EcC
Confidence            764

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=96.60  E-value=0.0013  Score=59.46  Aligned_cols=37  Identities=24%  Similarity=0.316  Sum_probs=31.6

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHC--CCeEEEEEcCCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDH--GYFVTTTVRSDP   40 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~   40 (327)
                      |.. +|+|.|+| +|++|..++..|++.  |++|++++| ++
T Consensus         2 M~~-~mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~d~-~~   40 (467)
T 2q3e_A            2 MFE-IKKICCIG-AGYVGGPTCSVIAHMCPEIRVTVVDV-NE   40 (467)
T ss_dssp             CCC-CCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECS-CH
T ss_pred             CCC-ccEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEEC-CH
Confidence            443 46899999 599999999999998  899999999 44

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.60  E-value=0.0092  Score=51.60  Aligned_cols=94  Identities=13%  Similarity=0.091  Sum_probs=58.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChh---HHHHHh-cCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPE---SFDAAI-AGC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~-~~~   79 (327)
                      ..+|||+|| |.+|..+++.+...|. +|+++++ ++.+......+ .      . ..  .|..+.+   .+.++. .++
T Consensus       165 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~-~~~~~~~~~~l-a------~-~v--~~~~~~~~~~~~~~~~~~g~  232 (343)
T 2dq4_A          165 GKSVLITGA-GPIGLMAAMVVRASGAGPILVSDP-NPYRLAFARPY-A------D-RL--VNPLEEDLLEVVRRVTGSGV  232 (343)
T ss_dssp             TSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS-CHHHHGGGTTT-C------S-EE--ECTTTSCHHHHHHHHHSSCE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC-CHHHHHHHHHh-H------H-hc--cCcCccCHHHHHHHhcCCCC
Confidence            468999999 9999999999999999 9999998 43332222211 1      0 11  2333322   222222 268


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      |+||++++..         .       .....++.++..+   +++.++.
T Consensus       233 D~vid~~g~~---------~-------~~~~~~~~l~~~G---~iv~~g~  263 (343)
T 2dq4_A          233 EVLLEFSGNE---------A-------AIHQGLMALIPGG---EARILGI  263 (343)
T ss_dssp             EEEEECSCCH---------H-------HHHHHHHHEEEEE---EEEECCC
T ss_pred             CEEEECCCCH---------H-------HHHHHHHHHhcCC---EEEEEec
Confidence            9999998731         1       1234555555443   7887764

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.59  E-value=0.0015  Score=54.91  Aligned_cols=35  Identities=29%  Similarity=0.396  Sum_probs=31.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE   41 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   41 (327)
                      +++|.|+|+ |.+|+.+++.|++.|++|++.+| +++
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~-~~~   38 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDI-NTD   38 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-SHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeC-CHH
Confidence            578999985 99999999999999999999999 443

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=96.58  E-value=0.0046  Score=56.03  Aligned_cols=32  Identities=22%  Similarity=0.097  Sum_probs=30.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .|+|.|+| +|++|..++..|++.|++|++++|
T Consensus         8 ~~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~   39 (478)
T 2y0c_A            8 SMNLTIIG-SGSVGLVTGACLADIGHDVFCLDV   39 (478)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CceEEEEC-cCHHHHHHHHHHHhCCCEEEEEEC
Confidence            47899999 599999999999999999999999

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.58  E-value=0.0049  Score=53.65  Aligned_cols=92  Identities=14%  Similarity=0.035  Sum_probs=58.6

Q ss_pred             CeEEEeCCcchhHHHH-HHHH-HHCCCe-EEEEEcCCCC---CcchhhhhhCCCCCCCCeEEEeCCCCCh--hHHHHHhc
Q 020334            6 GKVCVTGGTGFIGSWL-IMRL-LDHGYF-VTTTVRSDPE---HKKDLSFLTNLPGASERLQIFNADLNDP--ESFDAAIA   77 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l-~~~L-~~~g~~-V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~   77 (327)
                      .+|||+|| |-+|... ++.+ ...|.+ |+++++ ++.   +...+..+        +...+  |..+.  ..+.++ .
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~-~~~~~~~~~~~~~l--------Ga~~v--~~~~~~~~~i~~~-~  240 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGR-RDRPDPTIDIIEEL--------DATYV--DSRQTPVEDVPDV-Y  240 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEEC-CCSSCHHHHHHHHT--------TCEEE--ETTTSCGGGHHHH-S
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeC-CcccHHHHHHHHHc--------CCccc--CCCccCHHHHHHh-C
Confidence            78999999 9999999 8887 777987 999999 544   33333221        33444  44432  224444 3


Q ss_pred             -CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           78 -GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        78 -~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                       ++|+||++.+..         ..       ....++.++..   .+++.++.
T Consensus       241 gg~Dvvid~~g~~---------~~-------~~~~~~~l~~~---G~iv~~g~  274 (357)
T 2b5w_A          241 EQMDFIYEATGFP---------KH-------AIQSVQALAPN---GVGALLGV  274 (357)
T ss_dssp             CCEEEEEECSCCH---------HH-------HHHHHHHEEEE---EEEEECCC
T ss_pred             CCCCEEEECCCCh---------HH-------HHHHHHHHhcC---CEEEEEeC
Confidence             589999998731         11       23445555544   37887765

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.58  E-value=0.0032  Score=54.90  Aligned_cols=73  Identities=15%  Similarity=0.057  Sum_probs=49.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh-hHHHHHhcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP-ESFDAAIAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~d~vi   83 (327)
                      ..+|||+|+ |-+|..+++.+...|.+|+++++ ++.+...+..+-      .. ..  .|..+. +..+.+..++|+||
T Consensus       180 g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~-~~~~~~~~~~lG------a~-~v--~~~~~~~~~~~~~~~~~D~vi  248 (360)
T 1piw_A          180 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISR-SSRKREDAMKMG------AD-HY--IATLEEGDWGEKYFDTFDLIV  248 (360)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEES-SSTTHHHHHHHT------CS-EE--EEGGGTSCHHHHSCSCEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHcC------CC-EE--EcCcCchHHHHHhhcCCCEEE
Confidence            578999999 99999999998888999999998 554544443321      11 22  233332 22233335799999


Q ss_pred             EccCC
Q 020334           84 HVAAP   88 (327)
Q Consensus        84 h~a~~   88 (327)
                      .+++.
T Consensus       249 d~~g~  253 (360)
T 1piw_A          249 VCASS  253 (360)
T ss_dssp             ECCSC
T ss_pred             ECCCC
Confidence            99985

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.58  E-value=0.0043  Score=54.30  Aligned_cols=73  Identities=16%  Similarity=0.156  Sum_probs=50.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      ..+|||+|+ |-+|..+++.+...|.+|+++++ ++.+...+..+-       -...  .|..+.+.+.++..++|+||.
T Consensus       195 g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~-~~~~~~~a~~lG-------a~~v--i~~~~~~~~~~~~~g~Dvvid  263 (369)
T 1uuf_A          195 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTT-SEAKREAAKALG-------ADEV--VNSRNADEMAAHLKSFDFILN  263 (369)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHT-------CSEE--EETTCHHHHHTTTTCEEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHcC-------CcEE--eccccHHHHHHhhcCCCEEEE
Confidence            568999998 77999999999889999999998 544444333321       1122  244455444444457999999


Q ss_pred             ccCC
Q 020334           85 VAAP   88 (327)
Q Consensus        85 ~a~~   88 (327)
                      +++.
T Consensus       264 ~~g~  267 (369)
T 1uuf_A          264 TVAA  267 (369)
T ss_dssp             CCSS
T ss_pred             CCCC
Confidence            9884

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=96.57  E-value=0.0043  Score=52.17  Aligned_cols=63  Identities=16%  Similarity=0.012  Sum_probs=46.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..++|.|+| .|-||+.+++.|...|++|++.+| ++....             .++       ..+++.++++++|+|+
T Consensus       121 ~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr-~~~~~~-------------~~~-------~~~~l~ell~~aDiV~  178 (290)
T 3gvx_A          121 YGKALGILG-YGGIGRRVAHLAKAFGMRVIAYTR-SSVDQN-------------VDV-------ISESPADLFRQSDFVL  178 (290)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECS-SCCCTT-------------CSE-------ECSSHHHHHHHCSEEE
T ss_pred             ecchheeec-cCchhHHHHHHHHhhCcEEEEEec-cccccc-------------ccc-------ccCChHHHhhccCeEE
Confidence            468999999 599999999999999999999998 332211             111       1124667777899998


Q ss_pred             EccCC
Q 020334           84 HVAAP   88 (327)
Q Consensus        84 h~a~~   88 (327)
                      .+...
T Consensus       179 l~~P~  183 (290)
T 3gvx_A          179 IAIPL  183 (290)
T ss_dssp             ECCCC
T ss_pred             EEeec
Confidence            88754

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.56  E-value=0.0028  Score=56.22  Aligned_cols=71  Identities=21%  Similarity=0.197  Sum_probs=49.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      .+++|+|+|+ |-+|..+++.|...|. +|++++| ++.+...+..-.       +...  .   +.+++.+.+.++|+|
T Consensus       166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r-~~~ra~~la~~~-------g~~~--~---~~~~l~~~l~~aDvV  231 (404)
T 1gpj_A          166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANR-TYERAVELARDL-------GGEA--V---RFDELVDHLARSDVV  231 (404)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECS-SHHHHHHHHHHH-------TCEE--C---CGGGHHHHHHTCSEE
T ss_pred             cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeC-CHHHHHHHHHHc-------CCce--e---cHHhHHHHhcCCCEE
Confidence            4679999997 9999999999999998 8999998 443321111100       1222  1   223466677889999


Q ss_pred             EEccCC
Q 020334           83 IHVAAP   88 (327)
Q Consensus        83 ih~a~~   88 (327)
                      |.+.+.
T Consensus       232 i~at~~  237 (404)
T 1gpj_A          232 VSATAA  237 (404)
T ss_dssp             EECCSS
T ss_pred             EEccCC
Confidence            999764

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.55  E-value=0.0046  Score=53.13  Aligned_cols=72  Identities=24%  Similarity=0.310  Sum_probs=46.2

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh--hHHHHHh-cCCCEEE
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP--ESFDAAI-AGCAGVI   83 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~-~~~d~vi   83 (327)
                      +|||+||+|.+|..+++.+...|++|+++++ ++.+...+..+-      .. ..+  |..+.  +.+.++- .++|+||
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~-~~~~~~~~~~lG------a~-~~i--~~~~~~~~~~~~~~~~~~d~vi  221 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTG-KAAEHDYLRVLG------AK-EVL--AREDVMAERIRPLDKQRWAAAV  221 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEES-CTTCHHHHHHTT------CS-EEE--ECC---------CCSCCEEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHcC------Cc-EEE--ecCCcHHHHHHHhcCCcccEEE
Confidence            7999999999999999999999999999999 544444433321      11 122  33332  1122222 2589999


Q ss_pred             EccCC
Q 020334           84 HVAAP   88 (327)
Q Consensus        84 h~a~~   88 (327)
                      ++++.
T Consensus       222 d~~g~  226 (328)
T 1xa0_A          222 DPVGG  226 (328)
T ss_dssp             ECSTT
T ss_pred             ECCcH
Confidence            99873

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.55  E-value=0.0056  Score=50.81  Aligned_cols=57  Identities=18%  Similarity=0.155  Sum_probs=46.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+++++|+|+++.+|+.++..|++.|.+|++..|+.                              ..+.+.++++|+||
T Consensus       160 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------------------------~~L~~~~~~ADIVI  209 (285)
T 3l07_A          160 EGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT------------------------------TDLKSHTTKADILI  209 (285)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------------------------SSHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc------------------------------hhHHHhcccCCEEE
Confidence            468999999999999999999999999998876511                              13567788999999


Q ss_pred             EccCCCC
Q 020334           84 HVAAPID   90 (327)
Q Consensus        84 h~a~~~~   90 (327)
                      .+.+...
T Consensus       210 ~Avg~p~  216 (285)
T 3l07_A          210 VAVGKPN  216 (285)
T ss_dssp             ECCCCTT
T ss_pred             ECCCCCC
Confidence            9887543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.55  E-value=0.0023  Score=54.89  Aligned_cols=66  Identities=26%  Similarity=0.292  Sum_probs=47.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +|+|.|+| .|.+|..+++.|++.|++|++.+| +++....   +..     .+++.       ..++.++++++|+||-
T Consensus        31 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr-~~~~~~~---l~~-----~g~~~-------~~~~~e~~~~aDvVi~   93 (320)
T 4dll_A           31 ARKITFLG-TGSMGLPMARRLCEAGYALQVWNR-TPARAAS---LAA-----LGATI-------HEQARAAARDADIVVS   93 (320)
T ss_dssp             CSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECS-CHHHHHH---HHT-----TTCEE-------ESSHHHHHTTCSEEEE
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcC-CHHHHHH---HHH-----CCCEe-------eCCHHHHHhcCCEEEE
Confidence            46899998 599999999999999999999999 4433322   221     12222       1235567778999987


Q ss_pred             ccC
Q 020334           85 VAA   87 (327)
Q Consensus        85 ~a~   87 (327)
                      +..
T Consensus        94 ~vp   96 (320)
T 4dll_A           94 MLE   96 (320)
T ss_dssp             CCS
T ss_pred             ECC
Confidence            764

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.54  E-value=0.0036  Score=53.12  Aligned_cols=70  Identities=17%  Similarity=0.180  Sum_probs=50.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..++|+|+|+ |-+|+.+++.|...|.+|++.+| .+.....+..        .+++.+     +..++.++++++|+|+
T Consensus       156 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~-~~~~~~~~~~--------~g~~~~-----~~~~l~~~l~~aDvVi  220 (300)
T 2rir_A          156 HGSQVAVLGL-GRTGMTIARTFAALGANVKVGAR-SSAHLARITE--------MGLVPF-----HTDELKEHVKDIDICI  220 (300)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHH--------TTCEEE-----EGGGHHHHSTTCSEEE
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHH--------CCCeEE-----chhhHHHHhhCCCEEE
Confidence            4689999995 99999999999999999999999 4322221111        122322     2245777888999999


Q ss_pred             EccCC
Q 020334           84 HVAAP   88 (327)
Q Consensus        84 h~a~~   88 (327)
                      .+...
T Consensus       221 ~~~p~  225 (300)
T 2rir_A          221 NTIPS  225 (300)
T ss_dssp             ECCSS
T ss_pred             ECCCh
Confidence            88764

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.54  E-value=0.011  Score=51.65  Aligned_cols=74  Identities=22%  Similarity=0.142  Sum_probs=48.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCC-hhHHHHHhc--CCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLND-PESFDAAIA--GCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~--~~d~   81 (327)
                      ..+|||+| +|.+|...++.+...|.+|+++++ ++.+......+-       --..+.-+-.+ .+.+.++..  ++|+
T Consensus       190 g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~-~~~~~~~~~~lG-------a~~vi~~~~~~~~~~v~~~~~g~g~D~  260 (363)
T 3uog_A          190 GDRVVVQG-TGGVALFGLQIAKATGAEVIVTSS-SREKLDRAFALG-------ADHGINRLEEDWVERVYALTGDRGADH  260 (363)
T ss_dssp             TCEEEEES-SBHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHT-------CSEEEETTTSCHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEec-CchhHHHHHHcC-------CCEEEcCCcccHHHHHHHHhCCCCceE
Confidence            57899999 899999999999999999999998 443333333321       11222211122 223444443  6899


Q ss_pred             EEEccC
Q 020334           82 VIHVAA   87 (327)
Q Consensus        82 vih~a~   87 (327)
                      ||.++|
T Consensus       261 vid~~g  266 (363)
T 3uog_A          261 ILEIAG  266 (363)
T ss_dssp             EEEETT
T ss_pred             EEECCC
Confidence            999998

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.52  E-value=0.0062  Score=50.98  Aligned_cols=57  Identities=16%  Similarity=0.136  Sum_probs=46.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHH--HHhcCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFD--AAIAGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~--~~~~~~d~   81 (327)
                      .+++++|+|++|.+|+.++..|++.|.+|++..|+..                              .+.  +.++++|+
T Consensus       164 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~------------------------------~l~l~~~~~~ADI  213 (300)
T 4a26_A          164 AGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS------------------------------TEDMIDYLRTADI  213 (300)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC------------------------------HHHHHHHHHTCSE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC------------------------------CchhhhhhccCCE
Confidence            4789999999999999999999999999998877110                              233  77889999


Q ss_pred             EEEccCCCC
Q 020334           82 VIHVAAPID   90 (327)
Q Consensus        82 vih~a~~~~   90 (327)
                      ||.+.+...
T Consensus       214 VI~Avg~p~  222 (300)
T 4a26_A          214 VIAAMGQPG  222 (300)
T ss_dssp             EEECSCCTT
T ss_pred             EEECCCCCC
Confidence            999988543

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.51  E-value=0.013  Score=51.36  Aligned_cols=73  Identities=12%  Similarity=0.106  Sum_probs=47.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHh--cCCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAI--AGCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~v   82 (327)
                      ..+|||+||+|-+|..+++.+...|.+|+++++ . .+...+..+        +...+ .|..+.+..+.+.  .++|+|
T Consensus       184 g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~-~~~~~~~~l--------Ga~~v-~~~~~~~~~~~~~~~~g~D~v  252 (375)
T 2vn8_A          184 GKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-Q-DASELVRKL--------GADDV-IDYKSGSVEEQLKSLKPFDFI  252 (375)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-G-GGHHHHHHT--------TCSEE-EETTSSCHHHHHHTSCCBSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-h-HHHHHHHHc--------CCCEE-EECCchHHHHHHhhcCCCCEE
Confidence            568999999999999999999999999998874 3 232222221        11111 2333333223332  369999


Q ss_pred             EEccCC
Q 020334           83 IHVAAP   88 (327)
Q Consensus        83 ih~a~~   88 (327)
                      |+++|.
T Consensus       253 id~~g~  258 (375)
T 2vn8_A          253 LDNVGG  258 (375)
T ss_dssp             EESSCT
T ss_pred             EECCCC
Confidence            999983

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.48  E-value=0.011  Score=50.93  Aligned_cols=72  Identities=19%  Similarity=0.162  Sum_probs=47.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh---hHHHHHhcCCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP---ESFDAAIAGCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~~~d~   81 (327)
                      ..+|||+|+ |-+|...++.+...|.+|+++++ ++.+......+-      .. ..+  |..+.   +.+.+...++|+
T Consensus       167 g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~-~~~~~~~~~~lG------a~-~~i--~~~~~~~~~~~~~~~g~~d~  235 (340)
T 3s2e_A          167 GQWVVISGI-GGLGHVAVQYARAMGLRVAAVDI-DDAKLNLARRLG------AE-VAV--NARDTDPAAWLQKEIGGAHG  235 (340)
T ss_dssp             TSEEEEECC-STTHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHTT------CS-EEE--ETTTSCHHHHHHHHHSSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHcC------CC-EEE--eCCCcCHHHHHHHhCCCCCE
Confidence            578999997 88999999999999999999999 444333333221      11 222  33332   233333337899


Q ss_pred             EEEccC
Q 020334           82 VIHVAA   87 (327)
Q Consensus        82 vih~a~   87 (327)
                      ||.+++
T Consensus       236 vid~~g  241 (340)
T 3s2e_A          236 VLVTAV  241 (340)
T ss_dssp             EEESSC
T ss_pred             EEEeCC
Confidence            999986

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=96.48  E-value=0.0025  Score=54.06  Aligned_cols=37  Identities=19%  Similarity=0.312  Sum_probs=32.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK   43 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   43 (327)
                      |+||-++| .|..|..+++.|++.||+|++.+| ++++.
T Consensus         3 M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr-~~~~~   39 (300)
T 3obb_A            3 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDL-VQSAV   39 (300)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-SHHHH
T ss_pred             cCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcC-CHHHH
Confidence            57899999 799999999999999999999999 54443

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.47  E-value=0.0089  Score=51.38  Aligned_cols=67  Identities=15%  Similarity=0.097  Sum_probs=47.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..++|.|+|. |.+|+.+++.|...|++|++.+| ++.......   .     .++...        ++.+++.++|+|+
T Consensus       154 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~-~~~~~~~~~---~-----~g~~~~--------~l~e~l~~aDvVi  215 (330)
T 2gcg_A          154 TQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTG-RQPRPEEAA---E-----FQAEFV--------STPELAAQSDFIV  215 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEES-SSCCHHHHH---T-----TTCEEC--------CHHHHHHHCSEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECC-CCcchhHHH---h-----cCceeC--------CHHHHHhhCCEEE
Confidence            3678999995 99999999999999999999998 433222211   1     123321        2455667889998


Q ss_pred             EccCC
Q 020334           84 HVAAP   88 (327)
Q Consensus        84 h~a~~   88 (327)
                      -+...
T Consensus       216 ~~vp~  220 (330)
T 2gcg_A          216 VACSL  220 (330)
T ss_dssp             ECCCC
T ss_pred             EeCCC
Confidence            87754

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.47  E-value=0.0036  Score=54.31  Aligned_cols=68  Identities=24%  Similarity=0.259  Sum_probs=48.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      ..+|||+|+ |-+|...++.+...|.+|+++++ ++.+...+..+        +...+.   .+.+.+.+   ++|+||.
T Consensus       177 g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~-~~~~~~~~~~l--------Ga~~v~---~~~~~~~~---~~D~vid  240 (348)
T 3two_A          177 GTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFAR-NEHKKQDALSM--------GVKHFY---TDPKQCKE---ELDFIIS  240 (348)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHTTCEEEEECS-SSTTHHHHHHT--------TCSEEE---SSGGGCCS---CEEEEEE
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHhc--------CCCeec---CCHHHHhc---CCCEEEE
Confidence            578999997 99999999999999999999998 55554444332        122222   33333322   7999999


Q ss_pred             ccCC
Q 020334           85 VAAP   88 (327)
Q Consensus        85 ~a~~   88 (327)
                      +++.
T Consensus       241 ~~g~  244 (348)
T 3two_A          241 TIPT  244 (348)
T ss_dssp             CCCS
T ss_pred             CCCc
Confidence            9884

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	327
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	6e-37
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	5e-35
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	7e-31
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-27
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	7e-27
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	6e-24
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	1e-22
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	1e-22
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	2e-21
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-19
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-18
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	8e-17
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	1e-16
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	1e-15
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	1e-15
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	2e-15
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	6e-15
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	2e-14
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	3e-14
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	4e-14
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-12
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-09
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-09
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	2e-09
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	5e-09
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	2e-08
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	3e-08
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-07
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-07
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	2e-07
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	0.003
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	4e-07
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	4e-07
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	4e-07
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	4e-07
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	1e-06
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-06
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	4e-06
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	5e-06
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	6e-06
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	6e-06
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	9e-06
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-05
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	2e-05
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	2e-05
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-05
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-05
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	4e-05
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-05
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	5e-05
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	5e-05
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	6e-05
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	7e-05
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	8e-05
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	9e-05
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-04
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	2e-04
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	3e-04
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	4e-04
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	4e-04
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-04
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	6e-04
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	9e-04
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	0.001
d1hyea1	145	c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydroge	0.001
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.001
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	0.002
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	0.002
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	0.002
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.003
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	0.003
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.003
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	0.004
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	0.004

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (333), Expect = 6e-37
 Identities = 53/325 (16%), Positives = 117/325 (36%), Gaps = 23/325 (7%)

Query: 5   KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA 64
           + ++ +TGG GF+GS L  +L+  G+ VT         K+++                N 
Sbjct: 1   RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHE---------NF 51

Query: 65  DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRA-VNGTIGILKSCLKSGTVKR 123
           +L + +  +        + H+A+P          + T +    GT+ +L    + G   R
Sbjct: 52  ELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--AR 109

Query: 124 FVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG 183
            +  S+ S VY   +      E +W   + I     + +     K + E     + ++ G
Sbjct: 110 LLLAST-SEVYGDPEVHPQ-SEDYWGHVNPIGPRACYDEG----KRVAETMCYAYMKQEG 163

Query: 184 LDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMV----HIDDVARAH 239
           +++         GP +       V + +   L   E  ++  + S      ++ D+    
Sbjct: 164 VEVRVARIFNTFGPRMHMNDGRVVSNFILQAL-QGEPLTVYGSGSQTRAFQYVSDLVNGL 222

Query: 240 IFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL 299
           + L+    +    + +  + TI E A+ +             S ++ +  K      K  
Sbjct: 223 VALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAK 282

Query: 300 LDICFTYKYGIDEMFDGAIKCCKER 324
           L + +     ++E  + AI   ++ 
Sbjct: 283 LMLGWEPVVPLEEGLNKAIHYFRKE 307

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score =  128 bits (320), Expect = 5e-35
 Identities = 73/333 (21%), Positives = 122/333 (36%), Gaps = 20/333 (6%)

Query: 5   KGK-VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
           +G  V VTG  GF+ S ++ +LL+HGY V  T R       +L    +            
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAKYPGRFETAVV 68

Query: 64  ADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKR 123
            D+    ++D  I G AGV H+A+ +    K  E V       GT+  L++   + +VKR
Sbjct: 69  EDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAI--GGTLNALRAAAATPSVKR 126

Query: 124 FVYTSSGSTVYFSGKDVD---------MLDETFWSDEDYIRKLDIWGKSYVLTKTLTERA 174
           FV TSS  +      +V+          L+    +              Y  +KT  E A
Sbjct: 127 FVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELA 186

Query: 175 ALEFAEEHGL--DLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE---YSILLNISM 229
           A +F +E+     L  ++P++ +G    P+      S   M L N E     +++     
Sbjct: 187 AWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYY 246

Query: 230 VHIDDVARAHIFLLEYPDAKGRY-ICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEG 288
           V   D+   H+  L  P  + R    ++       +       +P    P        + 
Sbjct: 247 VSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDL 306

Query: 289 YKLS-ALSSKKLLDICFTYKYGIDEMFDGAIKC 320
            K   A S + L  +       I+E     +  
Sbjct: 307 SKFDTAPSLEILKSLGRPGWRSIEESIKDLVGS 339

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  117 bits (294), Expect = 7e-31
 Identities = 51/337 (15%), Positives = 108/337 (32%), Gaps = 30/337 (8%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           K+ +TGG GFIGS ++  ++ +       +     +  +L  L+++   S R    +AD+
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNID-KLTYAGNLESLSDISE-SNRYNFEHADI 59

Query: 67  NDPESFDAAIAG--CAGVIHVAAPIDIDGKETEEVMTQRA-VNGTIGILKSCLKSG---- 119
            D               V+H+AA   +D   T         + GT  +L+   K      
Sbjct: 60  CDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALG 119

Query: 120 ----TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAA 175
                  RF + S+   VY      D ++ +                 Y  +K  ++   
Sbjct: 120 EDKKNNFRFHHISTDE-VYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLV 178

Query: 176 LEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMV----H 231
             +   +GL  +    S   GP+    F   +   + +     +   I      +    +
Sbjct: 179 RAWRRTYGLPTIVTNCSNNYGPY---HFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLY 235

Query: 232 IDDVARAHIFLLEYPDAKGRY-ICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEI---- 286
           ++D ARA   ++    A   Y I    +    ++   +     E          +I    
Sbjct: 236 VEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVA 295

Query: 287 ----EGYKLSALSSKKLLDICFTYKYGIDEMFDGAIK 319
                  + +  + K   ++ +      +      ++
Sbjct: 296 DRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVE 332

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  106 bits (265), Expect = 4e-27
 Identities = 59/328 (17%), Positives = 115/328 (35%), Gaps = 27/328 (8%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTT----TVRSDPEHKKDLSFLTNLPGASERLQIF 62
           ++ VTGG GFIGS  + +LL   Y         V     +  + + L  +  A  RL+  
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD-ADPRLRFV 60

Query: 63  NADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRA-VNGTIGILKSCLKSGTV 121
           + D+ D       + G   ++H AA   +D       +     V GT  +L+  + +G  
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGV- 119

Query: 122 KRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE 181
            R V+  S + VY S      +D   W++   +     +  S    K  ++  A  +   
Sbjct: 120 GRVVH-VSTNQVYGS------IDSGSWTESSPLEPNSPYAAS----KAGSDLVARAYHRT 168

Query: 182 HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMV----HIDDVAR 237
           +GLD+         GP+   +    +       L +     +  + + V    H DD  R
Sbjct: 169 YGLDVRITRCCNNYGPY---QHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCR 225

Query: 238 AHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGY--KLSALS 295
               +L    A   Y               +          +V  +++ +G+  + S   
Sbjct: 226 GIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDG 285

Query: 296 SKKLLDICFTYKYGIDEMFDGAIKCCKE 323
            K   ++ +  +    +     ++  +E
Sbjct: 286 GKIERELGYRPQVSFADGLARTVRWYRE 313

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  106 bits (265), Expect = 7e-27
 Identities = 46/274 (16%), Positives = 89/274 (32%), Gaps = 27/274 (9%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR----SDPEHKKDLSFLTNLPGASERLQIF 62
              +TG TG  GS+L   LL+ GY V    R     + E    +    +    + +  + 
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHI--YQDPHTCNPKFHLH 60

Query: 63  NADLNDPESFDAAIAGCA--GVIHVAAPIDIDGKETEEVMTQRA-VNGTIGILKSCLKSG 119
             DL+D  +    +       V ++ A   +         T      GT+ +L++    G
Sbjct: 61  YGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG 120

Query: 120 T--VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALE 177
                RF   S+ S +Y       ++ E    +             Y + K       + 
Sbjct: 121 LEKKTRFYQAST-SELY------GLVQEIPQKETTPFYPRSP----YAVAKLYAYWITVN 169

Query: 178 FAEEHGLDLVTLIPSFVVGPFICPKFAGS-VRSTLAMVLGNREEYSILLNI----SMVHI 232
           + E +G+     I      P     F    +   +A +    E    L N+       H 
Sbjct: 170 YRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHA 229

Query: 233 DDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAE 266
            D  +    +L+    +   I +  + ++++  E
Sbjct: 230 KDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVE 263

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 98.5 bits (244), Expect = 6e-24
 Identities = 60/327 (18%), Positives = 110/327 (33%), Gaps = 25/327 (7%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           K+ +TG  GFI S +  RL   G++V  +     EH  +  F                DL
Sbjct: 17  KISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEF---------HLVDL 67

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVN--GTIGILKSCLKSGTVKRF 124
              E+      G   V ++AA +   G            N   +  ++++   +G +KRF
Sbjct: 68  RVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRF 126

Query: 125 VYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGL 184
            Y SS        +          SD       D     + L K  TE     + ++ G+
Sbjct: 127 FYASSACIYPEFKQLETTNVSLKESDAWPAEPQDA----FGLEKLATEELCKHYNKDFGI 182

Query: 185 DLVTLIPSFVVGPF--ICPKFAGSVRSTLAMVLGNREEYSILLNI----SMVHIDDVARA 238
           +        + GPF         +  +       + + + +  +     S   ID+    
Sbjct: 183 ECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEG 242

Query: 239 HIFLLEYPDAKGRYICSSAKLTIQEMAEFL-SAKHPEYPIPNVDSLSEIEGYKLSALSSK 297
            + L +    +   I S   +++ EMAE + S +  + PI ++     + G        K
Sbjct: 243 VLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIK 302

Query: 298 KLLDICFTYKYGIDEMFDGAIKCCKER 324
           + L   +     + E         KE+
Sbjct: 303 EKLG--WAPNMRLKEGLRITYFWIKEQ 327

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 94.2 bits (233), Expect = 1e-22
 Identities = 41/338 (12%), Positives = 100/338 (29%), Gaps = 53/338 (15%)

Query: 5   KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA 64
           K +V + G  G +GS +  +L   G         D                         
Sbjct: 2   KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------EL 38

Query: 65  DLNDPESFDAAIAG--CAGVIHVAAPIDIDGKETEEVMTQRAVN--GTIGILKSCLKSGT 120
           +L D  +     A      V   AA +                N      I+ +  ++  
Sbjct: 39  NLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND- 97

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           V + ++  S S +Y       M  E+          L+   + Y + K    +    +  
Sbjct: 98  VNKLLFLGS-SCIYPKLAKQPM-AESEL----LQGTLEPTNEPYAIAKIAGIKLCESYNR 151

Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI 240
           ++G D  +++P+ + GP      + S      +   +        ++ +       R  +
Sbjct: 152 QYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFL 211

Query: 241 FLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPN-----VDSLSEIEGYKL---- 291
            + +   A    +  + ++ ++     LS  +    +         +++++ GYK     
Sbjct: 212 HVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVF 271

Query: 292 ----------SALSSKKLLDICFTYKYGIDEMFDGAIK 319
                       L   +L  + + ++  ++       +
Sbjct: 272 DASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQ 309

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 93.9 bits (232), Expect = 1e-22
 Identities = 53/321 (16%), Positives = 100/321 (31%), Gaps = 30/321 (9%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
              VTG TG  G++L   LL+ GY V   V       +    L  L G    +Q  + D+
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWR--LREL-GIEGDIQYEDGDM 58

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMT---QRAVNGTIGILKSCLKSGTVKR 123
            D  S   A+                   +             G   +L++  +     R
Sbjct: 59  ADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETR 118

Query: 124 FVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG 183
           F   S+     F     +  DE                  Y + K       + + E  G
Sbjct: 119 FYQASTS--EMFGLIQAERQDENTPFY---------PRSPYGVAKLYGHWITVNYRESFG 167

Query: 184 LDLVTLIPSFVVGPFICPKFAGS-VRSTLAMVLGNREEYSILLNIS----MVHIDDVARA 238
           L   + I      P    +F    V   +A +   +++   L N+          D   A
Sbjct: 168 LHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEA 227

Query: 239 HIFLLEYPDAKGRYICSSAKLTIQEMAEF------LSAKHPEYPIPNVDSLSEIEGYKLS 292
              +L+   A    + +    T+++M +       L  +      P     +E++    +
Sbjct: 228 MWLMLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGN 287

Query: 293 ALSSKKLLDICFTYKYGIDEM 313
              ++++L   +  +  +DE+
Sbjct: 288 PAKAQRVLG--WKPRTSLDEL 306

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.2 bits (225), Expect = 2e-21
 Identities = 55/294 (18%), Positives = 96/294 (32%), Gaps = 24/294 (8%)

Query: 10  VTGGTGFIGSWLIMRLLDHGYFVTTTVR-SDPEHKKDLSFLTNLPGA--SERLQIFNADL 66
           +TG TG  GS+L   LL+ GY V   VR S   +   +  L   P A     +++   DL
Sbjct: 6   ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDL 65

Query: 67  NDPESFDAAI--AGCAGVIHVAAPIDIDGKETEEVMTQRA-VNGTIGILKSCLKSG--TV 121
            D       I       + ++ A   +         T      GT+ +L +    G    
Sbjct: 66  TDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINS 125

Query: 122 KRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE 181
            +F   S+ S +Y        + E    +             Y   K       + F E 
Sbjct: 126 VKFYQAST-SELY------GKVQEIPQKETTPFYPRSP----YGAAKLYAYWIVVNFREA 174

Query: 182 HGLDLVTLIPSFVVGPFICPKFAGS-VRSTLAMVLGNREEYSILLNI----SMVHIDDVA 236
           + L  V  I      P     F    +  ++A +   + E   L N+       H  D  
Sbjct: 175 YNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYV 234

Query: 237 RAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYK 290
            A   +L+  + +   I +    +++E  E       +  +    + +E+   K
Sbjct: 235 EAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCK 288

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 85.8 bits (211), Expect = 2e-19
 Identities = 55/321 (17%), Positives = 112/321 (34%), Gaps = 18/321 (5%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
            + VTGG GFIGS  +  + ++   V  TV     +  + + L  + G  +R+++   D+
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILG--DRVELVVGDI 61

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRA-VNGTIGILKSCLKSGTVKRFV 125
            D E  D   A    ++H AA    D    +          GT  +L++  K     RF 
Sbjct: 62  ADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARK--YDIRFH 119

Query: 126 YTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS-YVLTKTLTERAALEFAEEHGL 184
           + S+           D+        E +  + +    S Y  TK  ++     +    G+
Sbjct: 120 HVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGV 179

Query: 185 DLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY---SILLNISMVHIDDVARAHIF 241
                  S   GP+   +    +   +  +L   +             +H +D +     
Sbjct: 180 KATISNCSNNYGPYQHIE--KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWA 237

Query: 242 LLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEG--YKLSALSSKKL 299
           +L        Y+  +      +    L  +    P    D +++  G   + +  +SK  
Sbjct: 238 ILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLR 297

Query: 300 LDICFTYKY-----GIDEMFD 315
            ++ +T ++     G++E   
Sbjct: 298 DELGWTPQFTDFSEGLEETIQ 318

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 83.1 bits (204), Expect = 1e-18
 Identities = 55/341 (16%), Positives = 115/341 (33%), Gaps = 43/341 (12%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           +V VTGG+G+IGS   ++LL +G+ V          +  L  +  L G  +       D+
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG--KHPTFVEGDI 59

Query: 67  NDPESFDAAIA--GCAGVIHVAAPIDIDGKETEEVMTQRA-VNGTIGILKSCLKSGTVKR 123
            +       +       VIH A    +     + +      VNGT+ ++ +   +  VK 
Sbjct: 60  RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKN 118

Query: 124 FVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG 183
           F+++SS + VY     +  ++                   Y  +K + E+   +  +   
Sbjct: 119 FIFSSSAT-VYGDQPKIPYVESFPT---------GTPQSPYGKSKLMVEQILTDLQKAQP 168

Query: 184 LDLVTLI-PSFVVGPFICPKFAGSVRSTLAMV--------LGNREEYSILLNISM----- 229
              + L+     VG           +     +        +G R+  +I  N        
Sbjct: 169 DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGT 228

Query: 230 -----VHIDDVARAHIFLLEYPDAKGRY----ICSSAKLTIQEMAEFLSAKHPEYPIPNV 280
                +H+ D+A  H+  +E    K       + +    ++ ++    S    +    + 
Sbjct: 229 GVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHF 288

Query: 281 DSL--SEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAIK 319
                 ++  Y   A  + + L+  +     +DEM      
Sbjct: 289 APRREGDLPAYWADASKADRELN--WRVTRTLDEMAQDTWH 327

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 77.8 bits (190), Expect = 8e-17
 Identities = 36/271 (13%), Positives = 75/271 (27%), Gaps = 42/271 (15%)

Query: 3   EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIF 62
           +QK  + V G TG  G+ LI      G+ V   V S          L  +P       +F
Sbjct: 1   QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHS--LKGLIAEELQAIPNV----TLF 54

Query: 63  NADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVK 122
              L +       +   A +  +                   +     +  +  ++GT++
Sbjct: 55  QGPLLNNVPLMDTLFEGAHLAFINTTSQAG----------DEIAIGKDLADAAKRAGTIQ 104

Query: 123 RFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH 182
            ++Y+S      +       +    ++ E+Y+R+L +         +    A +      
Sbjct: 105 HYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGL--------PSTFVYAGIYNNNFT 156

Query: 183 GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFL 242
            L         +                L  +                   DV  A + +
Sbjct: 157 SLPYPLFQMELMPDGTFEWHAPFDPDIPLPWL---------------DAEHDVGPALLQI 201

Query: 243 LEYPDAKG---RYICSSAKLTIQEMAEFLSA 270
            +    K    R   +   L+  ++    S 
Sbjct: 202 FKDGPQKWNGHRIALTFETLSPVQVCAAFSR 232

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 77.1 bits (188), Expect = 1e-16
 Identities = 40/297 (13%), Positives = 88/297 (29%), Gaps = 49/297 (16%)

Query: 3   EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR----SDPEHKKDLSFLTNLPGASER 58
           ++K +V + GGTG+IG  ++   +  G+      R    S+ +  + L +   L      
Sbjct: 1   DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQL-----G 55

Query: 59  LQIFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKS 118
            ++  A L+D +    A+     VI   A   +     E++    A+           K 
Sbjct: 56  AKLIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAI-----------KE 104

Query: 119 GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEF 178
               +    S         +         + D+  +R+                      
Sbjct: 105 AGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEA------------------ 146

Query: 179 AEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARA 238
                +    +  +   G F     A      +             +    V  DDV   
Sbjct: 147 ---ASIPYTYVSSNMFAGYFA-GSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTY 202

Query: 239 HIFLLEYPDAKGR---YICSSAKLTIQEMAEFLSA---KHPEY-PIPNVDSLSEIEG 288
            I  ++ P    +          L+ +E+ +       ++ +   I + D L++++ 
Sbjct: 203 TIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKD 259

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.8 bits (177), Expect = 1e-15
 Identities = 36/250 (14%), Positives = 66/250 (26%), Gaps = 52/250 (20%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           K+ + G TG  G   + + +  GY VT  VR       +               +   D+
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR---------PAHVVVGDV 55

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
                 D  +AG   VI +    +     T      R +        + +K+  V + V 
Sbjct: 56  LQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNI-------VAAMKAHGVDKVVA 108

Query: 127 TSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDL 186
            +S   ++   K    L                                 +   E GL  
Sbjct: 109 CTSAFLLWDPTKVPPRLQAVTDDH----------------------IRMHKVLRESGLKY 146

Query: 187 VTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP 246
           V ++P  +              +    V  +    S      ++   D+    +  L   
Sbjct: 147 VAVMPPHIGDQP---------LTGAYTVTLDGRGPS-----RVISKHDLGHFMLRCLTTD 192

Query: 247 DAKGRYICSS 256
           +  G     S
Sbjct: 193 EYDGHSTYPS 202

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 74.0 bits (180), Expect = 1e-15
 Identities = 51/339 (15%), Positives = 110/339 (32%), Gaps = 33/339 (9%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR-SDPEHKKDLSFLTNLPGASERLQIFNAD 65
           K+ +TGG GF+GS L    L  G  +      S      +L +L++L       +  + D
Sbjct: 2   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLG----NFEFVHGD 57

Query: 66  LNDPESFDAAIAGCA--GVIHVAAPIDIDGKETE-EVMTQRAVNGTIGILKSCLKSGTVK 122
           + +       I         H+A  + +        +  +  V GT+ +L++  +  +  
Sbjct: 58  IRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNC 117

Query: 123 RFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK-----SYVLTKTLTERAALE 177
             +Y+S+        +      ET ++  D     D   +      Y  +K   ++  L+
Sbjct: 118 NIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD 177

Query: 178 FAEEHGLDLVTLIPSFVVGPFICPKFAG-----SVRSTLAMVLGNREEYSILLNISMV-- 230
           +A   GL+ V    S + G      +         +  + +  G  + ++I  N   V  
Sbjct: 178 YARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD 237

Query: 231 --HIDDVARAHIFLLEYPDAKG-----RYICSSAKLTIQEMAEFLSAKHPEYPIPNV--- 280
             H +D+   +   L                    L++ E+ + L   +    +      
Sbjct: 238 VLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLL-EDYCNIDMRFTNLP 296

Query: 281 DSLSEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAIK 319
              S+   +          +D  ++ K    +       
Sbjct: 297 VRESDQRVFVADIKKITNAID--WSPKVSAKDGVQKMYD 333

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 73.6 bits (179), Expect = 2e-15
 Identities = 47/324 (14%), Positives = 94/324 (29%), Gaps = 23/324 (7%)

Query: 5   KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR----SDPEHKKDLSFLTNLPGASERLQ 60
           +    +TG TG  GS+L   LL  GY V   +R     + +    +    +       ++
Sbjct: 1   RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVN-KALMK 59

Query: 61  IFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           +  ADL D  S    I                   + E+    A     G     L++  
Sbjct: 60  LHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGA-LRLLEAVR 118

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
                   +         ++        S+         +  S    K       + + E
Sbjct: 119 SHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAAS----KCAAHWYTVNYRE 174

Query: 181 EHGLDLVTLIPSFVVGPFICPKFA-GSVRSTLAMVLGNREEYSILLNI----SMVHIDDV 235
            +GL     I      P     F    +   L  +    +    L N+          D 
Sbjct: 175 AYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDY 234

Query: 236 ARAHIFLLEYPDAKGRYICSSAKLTIQEMAE------FLSAKHPEYPIPNVDSLSEIEGY 289
             A   +L+        + +    T++E  +       L+ K            +E++  
Sbjct: 235 VEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNL 294

Query: 290 KLSALSSKKLLDICFTYKYGIDEM 313
           +  A  +K++L   +  + G +++
Sbjct: 295 QGDASKAKEVLG--WKPQVGFEKL 316

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 72.3 bits (176), Expect = 6e-15
 Identities = 60/337 (17%), Positives = 116/337 (34%), Gaps = 32/337 (9%)

Query: 1   MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGA--SER 58
           +  Q     +TG  GFIGS L+  LL     V         H+++L  + +L        
Sbjct: 12  LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN 71

Query: 59  LQIFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRA-VNGTIGILKSCLK 117
            +    D+ + +  + A AG   V+H AA   +     + + +    ++G + +L +   
Sbjct: 72  FKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD 131

Query: 118 SGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALE 177
           +   + F Y +S S+ Y     +          ED I K       Y +TK + E  A  
Sbjct: 132 AKV-QSFTYAAS-SSTYGDHPGL-------PKVEDTIGK---PLSPYAVTKYVNELYADV 179

Query: 178 FAEEHGLDLVTLIPSFVVGPFICPKFA-GSVRSTLAMVLGNREEYSILLNI----SMVHI 232
           F+  +G   + L    V G    P  A  +V       +   ++  I  +        +I
Sbjct: 180 FSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYI 239

Query: 233 DDVARAHIFLLEYPDAKGRYICS-------SAKLTIQEMAEFLSAKHPEY---PIPNVDS 282
           ++  +A++            + +       S       + + L+     Y   P+     
Sbjct: 240 ENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFR 299

Query: 283 LSEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAIK 319
             ++         + KLL   +  KY +      A+ 
Sbjct: 300 EGDVRHSLADISKAAKLLG--YAPKYDVSAGVALAMP 334

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 70.5 bits (171), Expect = 2e-14
 Identities = 52/344 (15%), Positives = 99/344 (28%), Gaps = 43/344 (12%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           V VTGG G+IGS  ++ L+++GY               ++ L  L      +  +  DL 
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK--HHIPFYEVDLC 61

Query: 68  DPESFDAAIA--GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFV 125
           D +  +          VIH A    +       +           +L   ++   V +FV
Sbjct: 62  DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFV 121

Query: 126 YTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLD 185
           ++SS +    + +  +M+                    Y  TK   E    +        
Sbjct: 122 FSSSATVYGDATRFPNMIPIPEECPLGPT-------NPYGHTKYAIENILNDLYNSDKKS 174

Query: 186 LVTLI----------PSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMV----H 231
               I          PS ++G          +     + +G RE+  I  +         
Sbjct: 175 WKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTP 234

Query: 232 IDDVARAHIFLLEYPDAKGRY--------------ICSSAKLTIQEMAE-FLSAKHPEYP 276
           I D          +  A                  + S    T+ E+   F  A   + P
Sbjct: 235 IRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLP 294

Query: 277 IPNVDS-LSEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAIK 319
                    ++         +K+ L   +  +  +++      K
Sbjct: 295 YKVTGRRAGDVLNLTAKPDRAKRELK--WQTELQVEDSCKDLWK 336

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 70.2 bits (170), Expect = 3e-14
 Identities = 32/270 (11%), Positives = 71/270 (26%), Gaps = 42/270 (15%)

Query: 5   KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA 64
           + ++ + G TG+IG  +    LD G+     VR                  +    I + 
Sbjct: 3   RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHG 62

Query: 65  DLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRF 124
            ++D  S   A+     VI     + I+ +       +                    + 
Sbjct: 63  SIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEV---------------GTVKR 107

Query: 125 VYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGL 184
            + S       +   V+     F       R ++  G  Y                    
Sbjct: 108 FFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVS---------------- 151

Query: 185 DLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLE 244
                  +   G F+       + +     +    + +    +  V  +D+    I  ++
Sbjct: 152 ------SNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNA--RVVFVKEEDIGTFTIKAVD 203

Query: 245 YPDAKGR---YICSSAKLTIQEMAEFLSAK 271
            P    +       +  L++ E+      K
Sbjct: 204 DPRTLNKTLYLRLPANTLSLNELVALWEKK 233

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 68.7 bits (166), Expect = 4e-14
 Identities = 34/268 (12%), Positives = 70/268 (26%), Gaps = 33/268 (12%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
           V VTG +G  G  +  +L +                K+               +F  D+ 
Sbjct: 6   VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK--------IGGEADVFIGDIT 57

Query: 68  DPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYT 127
           D +S + A  G   ++ + + +            +   + T G     +           
Sbjct: 58  DADSINPAFQGIDALVILTSAVP---------KMKPGFDPTKGGRPEFIFEDGQYPEQVD 108

Query: 128 SSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLV 187
             G         V  +              D           L  +   E          
Sbjct: 109 WIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPY 168

Query: 188 TLI-PSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP 246
           T+I    ++               +  +L  +++  +  +   V   DVA   I  L + 
Sbjct: 169 TIIRAGGLLDK----------EGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFE 218

Query: 247 DAKGRY--ICSSAK---LTIQEMAEFLS 269
           +AK +   + S  +      ++     S
Sbjct: 219 EAKNKAFDLGSKPEGTSTPTKDFKALFS 246

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (158), Expect = 1e-12
 Identities = 61/348 (17%), Positives = 112/348 (32%), Gaps = 43/348 (12%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVT------TTVRSDPEHKKDLSFLTNLPGASERLQ 60
           KV VTGG G+IGS  ++ LL+ GY            R      + L  +  L G    ++
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG--RSVE 61

Query: 61  IFNADLNDPESFDAAIAGCAG--VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKS 118
               D+ D  +        +   VIH A    +     + +   R VN T  I    +  
Sbjct: 62  FEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYR-VNLTGTIQLLEIMK 120

Query: 119 GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEF 178
               + +  SS +TVY             +   D           Y  +K   E    + 
Sbjct: 121 AHGVKNLVFSSSATVYG---------NPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDL 171

Query: 179 AE-EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV--------LGNREEYSILLNI-- 227
            + +   + V L      G           +     +        +G RE  ++  N   
Sbjct: 172 CQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYD 231

Query: 228 --------SMVHIDDVARAHIFLLEYPDAKGRY----ICSSAKLTIQEMAEFLSAKHPEY 275
                     +H+ D+A+ HI  L     +       + +    ++ +M + +     + 
Sbjct: 232 TEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK 291

Query: 276 PIPNVDSLSEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAIKCCKE 323
               V +  E +     A  S    ++ +T   G+D M +   +  K+
Sbjct: 292 IPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQ 339

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 56.3 bits (134), Expect = 1e-09
 Identities = 58/366 (15%), Positives = 108/366 (29%), Gaps = 64/366 (17%)

Query: 7   KVCVTGGTGFIGSWLIMRLL-DHGYFVT--------------TTVRSDPEHKKDLSFLTN 51
           +V V GG G+IGS  +  LL D  + V                  R +   K   S    
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Query: 52  LPGASERLQIFNADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGI 111
            P A     +   D+ + +  +        +  V                 +  +  +  
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVG 123

Query: 112 LKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLT 171
           +   L++  + +       S+    G        T     D   K       Y  +K + 
Sbjct: 124 ILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKS-PESPYGESKLIA 182

Query: 172 ERAALEFAEEHGLDLVTLIPSFVVG------------------PFICPKFAGSVRSTLAM 213
           ER   + AE +G+  + L      G                  P I  +    +     +
Sbjct: 183 ERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRL 242

Query: 214 VLGNREEYSILLNI--------------SMVHIDDVARAHIFLLEYPDAKGRY------- 252
            +         + I                VH+ D+A AHI  L+Y +  G         
Sbjct: 243 TIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFS 302

Query: 253 ---ICSSAKLTIQEMAEFLSAKHPEYPIPNV---DSLSEIEGYKLSALSSKKLLDICFTY 306
              + +S   +++E+ E    K   +PIP         +      ++  ++++L   +  
Sbjct: 303 VFNLGTSRGYSVREVIEVA-RKTTGHPIPVRECGRREGDPAYLVAASDKAREVLG--WKP 359

Query: 307 KYGIDE 312
           KY   E
Sbjct: 360 KYDTLE 365

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 56.0 bits (133), Expect = 2e-09
 Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 4/65 (6%)

Query: 7  KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
          +V VTG TGF G WL + L   G  V     + P               ++ +Q    D+
Sbjct: 10 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF----ETARVADGMQSEIGDI 65

Query: 67 NDPES 71
           D   
Sbjct: 66 RDQNK 70

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 56.1 bits (133), Expect = 2e-09
 Identities = 49/364 (13%), Positives = 91/364 (25%), Gaps = 47/364 (12%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVT---TTVRSDPEHKKDLSFLTNLPGASERL---- 59
           +V V GG G+ G    + L    Y V      VR   +H+  L  LT +    +R+    
Sbjct: 3   RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 62

Query: 60  -------QIFNADLNDPESFDAAIA------GCAGVIHVAAPIDIDGKETEEVMTQRAVN 106
                  +++  D+ D E    +                +AP  +  +          V 
Sbjct: 63  ALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVI 122

Query: 107 GTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVD--MLDETFWSDEDYIRKLDIWGKSY 164
           GT+ +L +  + G     V   +         D++   +  T     D +         Y
Sbjct: 123 GTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFY 182

Query: 165 VLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNRE----- 219
            L+K           +  G+    L    V G                            
Sbjct: 183 HLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNR 242

Query: 220 -------------EYSILLNISMVHIDDVARAHIFLLEYPDAKGRYICS-------SAKL 259
                                  + I D  +     +  P   G +          S   
Sbjct: 243 FCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNE 302

Query: 260 TIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDICFTYKYGIDEMFDGAIK 319
               + +  S    +     V +               KL+++     Y  D + D  + 
Sbjct: 303 LASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLN 362

Query: 320 CCKE 323
              +
Sbjct: 363 FAVQ 366

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (127), Expect = 5e-09
 Identities = 31/260 (11%), Positives = 68/260 (26%), Gaps = 44/260 (16%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
            V + G +G  G  L+  +L+ G F   T+    +   D     N+       +  +   
Sbjct: 16  SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYA 75

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
           +  +  D            A        + + V+    +    G     L S   K    
Sbjct: 76  SAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS--KGADK 133

Query: 127 TSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDL 186
           +S+   +   G+    ++E  +      R                               
Sbjct: 134 SSNFLYLQVKGEVEAKVEELKFDRYSVFR------------------------------- 162

Query: 187 VTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP 246
               P  ++      +    +       L +        +   V +  V RA +  +  P
Sbjct: 163 ----PGVLLCDRQESRPGEWLVRKFFGSLPD-----SWASGHSVPVVTVVRAMLNNVVRP 213

Query: 247 DAKGRYICSSAKLTIQEMAE 266
             K   +  +    I ++ +
Sbjct: 214 RDKQMELLENKA--IHDLGK 231

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 52.7 bits (124), Expect = 2e-08
 Identities = 11/70 (15%), Positives = 21/70 (30%), Gaps = 7/70 (10%)

Query: 7  KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
          +V + G  GFIG+ L  RLL   ++    +    +                       D+
Sbjct: 2  RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDI 54

Query: 67 NDPESFDAAI 76
          +    +    
Sbjct: 55 SIHSEWIEYH 64

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 51.6 bits (123), Expect = 3e-08
 Identities = 35/257 (13%), Positives = 78/257 (30%), Gaps = 20/257 (7%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
            GK   +TG +  IG    +     G  VT T R++   ++    +      +E++    
Sbjct: 3   SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 62

Query: 64  ADLNDPESFDAAIA------GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGI-LKSCL 116
           AD+ +    D  I       G   ++   A  ++                T  +  ++ +
Sbjct: 63  ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 122

Query: 117 KSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAAL 176
           +     +     +   +      V               K  +       T+      A+
Sbjct: 123 EMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQ----YTRCT----AI 174

Query: 177 EFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVA 236
           +   +HG+ + ++ P  V   F+         S          +  I +       +++A
Sbjct: 175 DLI-QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVG-HCGKPEEIA 232

Query: 237 RAHIFLLEYPDAKGRYI 253
              +FL +   +   YI
Sbjct: 233 NIIVFLADRNLS--SYI 247

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 50.0 bits (119), Expect = 1e-07
 Identities = 35/274 (12%), Positives = 71/274 (25%), Gaps = 52/274 (18%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
             KV  +TG +  IG    +     G  VT T R     ++    +     + + +    
Sbjct: 4   AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 63

Query: 64  ADLNDPESFDAAIAG-------------CAGVIHVAAPIDIDGKETEE-------VMTQR 103
           AD+      D  ++               AG     +       ++ E       +  + 
Sbjct: 64  ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 123

Query: 104 AVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS 163
            +  T   +     +      + + +                                  
Sbjct: 124 VIALTKKAVPHLSSTKGEIVNISSIASGLHATPD-----------------------FPY 160

Query: 164 YVLTK----TLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNRE 219
           Y + K      T   A++   +HG+ + ++ P  V   F          S          
Sbjct: 161 YSIAKAAIDQYTRNTAIDLI-QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATM 219

Query: 220 EYSILLNISMVHIDDVARAHIFLLEYPDAKGRYI 253
           +  +     M    D+A    FL +   +   YI
Sbjct: 220 KECVPAG-VMGQPQDIAEVIAFLADRKTS--SYI 250

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 49.2 bits (117), Expect = 2e-07
 Identities = 37/262 (14%), Positives = 74/262 (28%), Gaps = 56/262 (21%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
           +G    VTGG+  IG  ++  L   G  V T  R+  E       LT       +++   
Sbjct: 7   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELND---CLTQWRSKGFKVEASV 63

Query: 64  ADLNDPESFDAAIAG--------------CAGVIHVAAPIDIDGKETEEVMT---QRAVN 106
            DL+        +                 AG++      D   ++   +M+   + A +
Sbjct: 64  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYH 123

Query: 107 GTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVL 166
            ++        S        +S    +              +       K  +       
Sbjct: 124 LSVLAHPFLKASERGNVVFISSVSGALAVP-----------YEAVYGATKGAMDQ----- 167

Query: 167 TKTLTERAALEFAEEHGLDLVTLIPSFVVGPFI-----CPKFAGSVRSTLAMVLGNREEY 221
              LT   A E+A +  + +  + P  +    +      P+   ++   +      R   
Sbjct: 168 ---LTRCLAFEWA-KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRR--- 220

Query: 222 SILLNISMVHIDDVARAHIFLL 243
                  M    ++A    FL 
Sbjct: 221 -------MGEPKELAAMVAFLC 235

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 48.6 bits (114), Expect = 2e-07
 Identities = 8/39 (20%), Positives = 14/39 (35%)

Query: 7  KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD 45
          +V + G TG  G  L+ R+L           +     + 
Sbjct: 4  RVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH 42

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 35.9 bits (81), Expect = 0.003
 Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 11/75 (14%)

Query: 191 PSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDAKG 250
           PS + GP    + A  + + +A +L  +           +   D+ARA   L        
Sbjct: 146 PSLLFGPREEFRLAEILAAPIARILPGK--------YHGIEACDLARALWRLALEEGKGV 197

Query: 251 RYICSSAKLTIQEMA 265
           R++ S     ++++ 
Sbjct: 198 RFVESDE---LRKLG 209

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 48.7 bits (114), Expect = 4e-07
 Identities = 33/317 (10%), Positives = 77/317 (24%), Gaps = 50/317 (15%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           K+ +TG  G +G  +  +L      V  T                           + D+
Sbjct: 3   KILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------------DLDI 38

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
            +  + +         + +         + EE          IG       + +V   + 
Sbjct: 39  TNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIV 98

Query: 127 TSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDL 186
             S   V+       + +    + +    K  + G+               F +      
Sbjct: 99  QISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGE--------------NFVKALNPKY 144

Query: 187 VTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP 246
             +  +++ G                    +  +       +     D+AR  + +++  
Sbjct: 145 YIVRTAWLYGDGNNFVKTMINL----GKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK 200

Query: 247 DAKGRYICS----SAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLLDI 302
           +    +       S      E+           P    +     +  K S L +  L   
Sbjct: 201 NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELT 260

Query: 303 CF----TYKYGIDEMFD 315
                  +K  + E  D
Sbjct: 261 TGDITREWKESLKEYID 277

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 48.4 bits (113), Expect = 4e-07
 Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 7  KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLS 47
           + + G TG +G  L   L   G  +   V S  E   D S
Sbjct: 2  NILLFGKTGQVGWELQRSLAPVGNLIALDVHS-KEFCGDFS 41

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 48.1 bits (114), Expect = 4e-07
 Identities = 36/270 (13%), Positives = 73/270 (27%), Gaps = 44/270 (16%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
             K   +TG +  IG    +     G  VT T RS    ++    +     + +++    
Sbjct: 4   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 63

Query: 64  ADLNDPESFDAAIAG-------------CAGVIHVAAPIDIDGKETEE-------VMTQR 103
           AD+   +  D  I                AG     A       +  +       +  Q 
Sbjct: 64  ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 123

Query: 104 AVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKS 163
            +  T  +    + S      V +                         ++         
Sbjct: 124 VIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPD---------------FLYYAIAKAAL 168

Query: 164 YVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI 223
              T++     A++ A + G+ + ++ P  V   F          S          +  I
Sbjct: 169 DQYTRST----AIDLA-KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECI 223

Query: 224 LLNISMVHIDDVARAHIFLLEYPDAKGRYI 253
            +  +    + +A   +FL +       YI
Sbjct: 224 PIG-AAGKPEHIANIILFLAD--RNLSFYI 250

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (114), Expect = 4e-07
 Identities = 23/149 (15%), Positives = 49/149 (32%), Gaps = 19/149 (12%)

Query: 1   MEEQKGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERL 59
           ME  + ++  VTG +G IG+ +   L+  G  V    R+    ++  +   +  G    L
Sbjct: 5   MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA-GYPGTL 63

Query: 60  QIFNADLNDPESFDAAIA-------------GCAGVIHVAAPIDIDGKETEEVMTQR--- 103
             +  DL++ E   +  +               AG+      +       +++       
Sbjct: 64  IPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLA 123

Query: 104 AVNGTIGILKSCLKSGTVK-RFVYTSSGS 131
               T    +S  +        +  +S S
Sbjct: 124 LSICTREAYQSMKERNVDDGHIININSMS 152

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 46.7 bits (110), Expect = 1e-06
 Identities = 37/244 (15%), Positives = 76/244 (31%), Gaps = 13/244 (5%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
           +GKV  VTG    IG  + M L   G  V     +  E  +++  +  +           
Sbjct: 17  EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV--VAAIKKNGSDAACVK 74

Query: 64  ADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKR 123
           A++   E            + +   +DI    +  V      + T           T  +
Sbjct: 75  ANVGVVEDIVRMF---EEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQ 131

Query: 124 F-VYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH 182
           F V   +   +   G+ + M   T  +       +    K  +   T     A++ A + 
Sbjct: 132 FFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIE--TFARCMAIDMA-DK 188

Query: 183 GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHI---DDVARAH 239
            + +  + P  +            + +   +     +EY+ +    +  +    D+AR  
Sbjct: 189 KITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVV 248

Query: 240 IFLL 243
            FL 
Sbjct: 249 CFLA 252

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 46.5 bits (110), Expect = 2e-06
 Identities = 37/258 (14%), Positives = 75/258 (29%), Gaps = 52/258 (20%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
           K K   VTGGT  IG  ++      G  + T  R++ E  + LS          ++    
Sbjct: 7   KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF---QVTGSV 63

Query: 64  ADLNDPESFDAAIAG--------------CAGVIHVAAPIDIDGKETEEVMTQRAVNGTI 109
            D +     +  +                  G I     +D   ++    +   + N   
Sbjct: 64  CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHI---STN--- 117

Query: 110 GILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKT 169
             L+S         +  +     +  +    +++  +  +         I+  +      
Sbjct: 118 --LESA--------YHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQ 167

Query: 170 LTERAALEFAEEHGLDLVTLIPSFVVGPFI----CPKFAGSVRSTLAMVLGNREEYSILL 225
           L    A E+A   G+    + P+ +  P        +F   V S   +    R       
Sbjct: 168 LARNLACEWA-SDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPL---GR------- 216

Query: 226 NISMVHIDDVARAHIFLL 243
                  ++V+    FL 
Sbjct: 217 ---FGEPEEVSSLVAFLC 231

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.0 bits (106), Expect = 4e-06
 Identities = 38/259 (14%), Positives = 82/259 (31%), Gaps = 61/259 (23%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
            G    VTG    IG   +  L   G  V    R++ +       L +L      ++   
Sbjct: 4   SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSD-------LVSLAKECPGIEPVC 56

Query: 64  ADLNDPESFDAAIAG---------CAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKS 114
            DL D ++ + A+ G          A ++ +   +++  +  +       +     + + 
Sbjct: 57  VDLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSF-SVNLRSVFQVSQM 115

Query: 115 CLKSGTVKR-----FVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKT 169
             +    +         +S  + V F                    K  +      LTK 
Sbjct: 116 VARDMINRGVPGSIVNVSSMVAHVTFPNLITYS-----------STKGAMTM----LTKA 160

Query: 170 LTERAALEFAEEHGLDLVTLIPSFVVGPFIC-----PKFAGSVRSTLAMVLGNREEYSIL 224
           +    A+E    H + + ++ P+ V+          P+FA  ++    +    +      
Sbjct: 161 M----AMELG-PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPL---RK------ 206

Query: 225 LNISMVHIDDVARAHIFLL 243
                  ++DV  + +FLL
Sbjct: 207 ----FAEVEDVVNSILFLL 221

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 5e-06
 Identities = 35/246 (14%), Positives = 71/246 (28%), Gaps = 22/246 (8%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTN--LPGASERLQI 61
           +G+V  VTGG   IG  ++  LL+ G  V    R     K     L     P    R+  
Sbjct: 11  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 70

Query: 62  FNADLNDPES----FDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLK 117
              ++ + E       + +     +  +            E ++ +  +  +        
Sbjct: 71  IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLET------ 124

Query: 118 SGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALE 177
              +    Y        +  +    +       +         G +      LT+  ALE
Sbjct: 125 --NLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALE 182

Query: 178 FAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVAR 237
           +A   G+ +  + P  +        +    +S             I     +   ++V+ 
Sbjct: 183 WA-CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK-----IPAK-RIGVPEEVSS 235

Query: 238 AHIFLL 243
              FLL
Sbjct: 236 VVCFLL 241

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 44.6 bits (105), Expect = 6e-06
 Identities = 28/254 (11%), Positives = 58/254 (22%), Gaps = 46/254 (18%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
            GK   +TG    IG  + +     G  V  +  +       +  +  L G   +     
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG---QAFACR 66

Query: 64  ADLNDPESFDAAIAG-------------CAGVIHVAAPIDIDGKETEEVMTQRAVNGTIG 110
            D+   +   A                  AG      P D+   +               
Sbjct: 67  CDITSEQELSALADFAISKLGKVDILVNNAGGGG-PKPFDMPMADFRRAYEL-------- 117

Query: 111 ILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTL 170
                + S      +                        + +          +  L + +
Sbjct: 118 ----NVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNM 173

Query: 171 TERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVR-STLAMVLGNREEYSILLNISM 229
               A +   E  + +  + P  ++   +       +    L      R          +
Sbjct: 174 ----AFDLG-EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRR----------L 218

Query: 230 VHIDDVARAHIFLL 243
               D+A A +FL 
Sbjct: 219 GQPQDIANAALFLC 232

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 44.7 bits (105), Expect = 6e-06
 Identities = 35/259 (13%), Positives = 70/259 (27%), Gaps = 43/259 (16%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
            GKV   TG    IG  + + L   G  V     S  +  +++  +  L     +     
Sbjct: 5   AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEV--VAELKKLGAQGVAIQ 62

Query: 64  ADLNDPESFDAAIA-------------GCAGVIHVAAPIDIDGKETEEVMTQR---AVNG 107
           AD++ P    A                  +G+      +++  +  ++V           
Sbjct: 63  ADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFV 122

Query: 108 TIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLT 167
               LK C + G +      ++  T   +                    L    K+ V  
Sbjct: 123 AQQGLKHCRRGGRIILTSSIAAVMTGIPN------------------HALYAGSKAAVE- 163

Query: 168 KTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNI 227
                  A++     G+ +  + P  V                   +   + +  +    
Sbjct: 164 -GFCRAFAVDCG-AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN 221

Query: 228 SMVHI---DDVARAHIFLL 243
            +  I    D+ RA   L 
Sbjct: 222 PLKRIGYPADIGRAVSALC 240

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 44.2 bits (102), Expect = 9e-06
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 8  VCVTGGTGFIGSWLIMRLLDHGYFVTTTV 36
          + VTGG GFIGS ++  L D G      V
Sbjct: 2  IIVTGGAGFIGSNIVKALNDKGITDILVV 30

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 43.9 bits (103), Expect = 1e-05
 Identities = 41/267 (15%), Positives = 77/267 (28%), Gaps = 44/267 (16%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
           KG+   +TGG   +G  L+ R +  G  V    +S     +  +         + +    
Sbjct: 4   KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH------GDNVLGIV 57

Query: 64  ADLNDPESFDAAIA-------------GCAGVIHVAAPIDIDGKETEEVMTQRA----VN 106
            D+   E    A +               AG+   +  +    +E+ +          V 
Sbjct: 58  GDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVK 117

Query: 107 GTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVL 166
           G I  +K+CL +    R     + S   F              +               L
Sbjct: 118 GYIHAVKACLPALVASRGNVIFTISNAGFYP------------NGGGPLYTAAKHAIVGL 165

Query: 167 TKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN 226
            + L    A E A    + +  +    +      P   G     ++ V       S+L  
Sbjct: 166 VREL----AFELA--PYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI 219

Query: 227 ISMVHIDDVARAHIFLLEYPDAKGRYI 253
             M  +++   A++F     DA     
Sbjct: 220 GRMPEVEEYTGAYVFFATRGDA--APA 244

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 43.2 bits (101), Expect = 2e-05
 Identities = 42/244 (17%), Positives = 71/244 (29%), Gaps = 32/244 (13%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
            GK   VTG    IG   +      G  +    R +    + ++ L              
Sbjct: 4   SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL------EAEAIAVV 57

Query: 64  ADLNDPESFDAAIAGCA---GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
           AD++DP++ +A  A      G +H  A                     +   +  L    
Sbjct: 58  ADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVL--RVNLTGSF 115

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDY-IRKLDIWGKSYVLTKTLTERAALEFA 179
           +                    +     +    Y   KL + G    L +TL    ALE A
Sbjct: 116 LVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVG----LARTL----ALELA 167

Query: 180 EEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAH 239
              G+ +  L+P  +  P        +    +      R              ++VA+A 
Sbjct: 168 -RKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGR----------AGRPEEVAQAA 216

Query: 240 IFLL 243
           +FLL
Sbjct: 217 LFLL 220

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 35/248 (14%), Positives = 72/248 (29%), Gaps = 25/248 (10%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
             K   VTGG   IG      +   G  V    RS  +  +    +    G   + + + 
Sbjct: 8   VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV--KTKAYQ 65

Query: 64  ADLNDPESFDAAIA------GCAGVIHVAAPIDIDGK--ETEEVMTQRAVNGTIGILKSC 115
            D+++ +     I       G    +   A + +     E          +  +  + + 
Sbjct: 66  CDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNT 125

Query: 116 LKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAA 175
            ++           GS V  S     +++++     +       +  S      L +  A
Sbjct: 126 CRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL---NGSLTQVFYNSSKAACSNLVKGLA 182

Query: 176 LEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDV 235
            E+A   G+ +  L P +V                 + +  NR              +++
Sbjct: 183 AEWA-SAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNR----------FAQPEEM 231

Query: 236 ARAHIFLL 243
               I LL
Sbjct: 232 TGQAILLL 239

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 33/256 (12%), Positives = 68/256 (26%), Gaps = 50/256 (19%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
           K K+  +TGG   IG  +  R    G  +           +       +     R+    
Sbjct: 4   KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAA-----IRNLGRRVLTVK 58

Query: 64  ADLNDPESFDAAIAG-------------CAGVIHVAAPIDIDGKETEEVMT---QRAVNG 107
            D++ P   +A                  AG+  +    ++  ++ ++            
Sbjct: 59  CDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLM 118

Query: 108 TIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLT 167
               +    ++G  +    TS+   +                      K    G     T
Sbjct: 119 AKAFVPGMKRNGWGRIINLTSTTYWLKIE-----------AYTHYISTKAANIG----FT 163

Query: 168 KTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNI 227
           + L    A +   + G+ +  + PS V           ++   L  +L            
Sbjct: 164 RAL----ASDLG-KDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPR------- 211

Query: 228 SMVHIDDVARAHIFLL 243
            +    D+  A  FL 
Sbjct: 212 -LQVPLDLTGAAAFLA 226

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 39/260 (15%), Positives = 73/260 (28%), Gaps = 60/260 (23%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
            GK   +TGG   +G+    + +  G  V      D E       L       +  +  +
Sbjct: 4   SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL------GDAARYQH 57

Query: 64  ADLNDPESFDAAIAGCA---GVIHV---------AAPIDIDGKETEEVMTQRAVNGTIGI 111
            D+   E +   +A      G +              ++ +  E    + +  + G    
Sbjct: 58  LDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIG 117

Query: 112 LKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKT-- 169
           +K+ +             GS V  S                          SY  +K   
Sbjct: 118 MKTVI-----PAMKDAGGGSIVNISS--------------AAGLMGLALTSSYGASKWGV 158

Query: 170 --LTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNI 227
             L++ AA+E                +    + P   G   + +    G R+      N 
Sbjct: 159 RGLSKLAAVELG-----------TDRIRVNSVHP---GMTYTPMTAETGIRQGEGNYPNT 204

Query: 228 SMVHI----DDVARAHIFLL 243
            M  +     ++A A + LL
Sbjct: 205 PMGRVGNEPGEIAGAVVKLL 224

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 4e-05
 Identities = 30/249 (12%), Positives = 77/249 (30%), Gaps = 31/249 (12%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
           +GKV  +TGG   +G  +   L   G       R     K     +++  G   ++    
Sbjct: 24  QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG--NKVHAIQ 81

Query: 64  ADLNDPESFDAAIA------GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLK 117
            D+ DP+     ++      G   ++   A  +                  I +  +   
Sbjct: 82  CDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFV 141

Query: 118 SGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALE 177
           +  + + +  +     + S   +     + +       K  +      ++K+L    A E
Sbjct: 142 TLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEA----MSKSL----AAE 193

Query: 178 FAEEHGLDLVTLIPSFVVGPFICPKFAGS---VRSTLAMVLGNREEYSILLNISMVHIDD 234
           +  ++G+    + P  +       +   +    +  +  +   R          +  +++
Sbjct: 194 WG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGR----------LGTVEE 242

Query: 235 VARAHIFLL 243
           +A    FL 
Sbjct: 243 LANLAAFLC 251

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 41.8 bits (98), Expect = 4e-05
 Identities = 38/266 (14%), Positives = 65/266 (24%), Gaps = 70/266 (26%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
            GK   VTGG   IG  +       G  V           K+++        +     F 
Sbjct: 4   AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLR--PEGKEVA-------EAIGGAFFQ 54

Query: 64  ADLNDPESFDAAIAG-------------CAGVIHVAAPIDIDGKETEEVMT---QRAVNG 107
            DL D       +                A +    + + +   E   V+       ++ 
Sbjct: 55  VDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHL 114

Query: 108 TIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLT 167
           +    +   K G        S                                   Y  +
Sbjct: 115 SALAAREMRKVGGGAIVNVASVQGLFAEQENAA-----------------------YNAS 151

Query: 168 K----TLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGS------VRSTLAMVLGN 217
           K     LT   AL+ A    + +  + P  +    +    A S       R    +    
Sbjct: 152 KGGLVNLTRSLALDLA-PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALR 210

Query: 218 REEYSILLNISMVHIDDVARAHIFLL 243
           R          +   ++VA A +FL 
Sbjct: 211 R----------LGKPEEVAEAVLFLA 226

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 41.7 bits (97), Expect = 5e-05
 Identities = 39/255 (15%), Positives = 74/255 (29%), Gaps = 31/255 (12%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
            GKVC VTG  G IG    +RL + G  +     +    +K  + +          + + 
Sbjct: 4   NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV---EARSYV 60

Query: 64  ADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKR 123
            D+   E+          V+     ID         +   A             S    R
Sbjct: 61  CDVTSEEAVIGT---VDSVVRDFGKIDF--------LFNNAGYQGAFAPVQDYPSDDFAR 109

Query: 124 FVYTSSGSTVYFSGKDVDMLDETFWSDEDYI-----RKLDIWGKSYVLTK----TLTERA 174
            +  +     +        +    +            K      +Y  +K     LTE A
Sbjct: 110 VLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETA 169

Query: 175 ALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHI-- 232
           AL+ A  + + +  + P ++   F+  +         +       +      I  V +  
Sbjct: 170 ALDLA-PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRR 228

Query: 233 ----DDVARAHIFLL 243
               +++     FLL
Sbjct: 229 YGDINEIPGVVAFLL 243

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 42.0 bits (98), Expect = 5e-05
 Identities = 38/247 (15%), Positives = 72/247 (29%), Gaps = 25/247 (10%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
           + KV  +TGG G IG       + +G  V     +D   +K    + N  G+ + +   +
Sbjct: 5   QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQK----VCNNIGSPDVISFVH 60

Query: 64  ADLNDPESFDAAIAGCA---GVIHV---AAPIDIDGKETEEVMTQRAVNGTIGI-LKSCL 116
            D+   E     +       G + +      +      +            + I +    
Sbjct: 61  CDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAF 120

Query: 117 KSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAAL 176
                   V   +          +            Y        K  VL   LT     
Sbjct: 121 LVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVY-----TATKHAVL--GLTTSLCT 173

Query: 177 EFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVA 236
           E   E+G+ +  + P  V  P +   F        +  +      +  L  +++  +DVA
Sbjct: 174 ELG-EYGIRVNCVSPYIVASPLLTDVFGVD-----SSRVEELAHQAANLKGTLLRAEDVA 227

Query: 237 RAHIFLL 243
            A  +L 
Sbjct: 228 DAVAYLA 234

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 41.7 bits (97), Expect = 6e-05
 Identities = 35/246 (14%), Positives = 68/246 (27%), Gaps = 26/246 (10%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
           +GKV  +TG +  +G  + +R       V    RS  +    +  L  +           
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV--LEEIKKVGGEAIAVK 63

Query: 64  ADLNDPES----FDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSG 119
            D+           +AI     +  +     ++   +   M+    N  I        +G
Sbjct: 64  GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVI----DTNLTG 119

Query: 120 TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFA 179
                               V  +          +       K  +   T T   ALE+A
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTET--LALEYA 177

Query: 180 EEHGLDLVTLIPSFVVGPFICPKFAGS--VRSTLAMVLGNREEYSILLNISMVHIDDVAR 237
              G+ +  + P  +  P    KFA         +M+              +   +++A 
Sbjct: 178 -PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGY----------IGEPEEIAA 226

Query: 238 AHIFLL 243
              +L 
Sbjct: 227 VAAWLA 232

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 41.1 bits (96), Expect = 7e-05
 Identities = 43/261 (16%), Positives = 91/261 (34%), Gaps = 57/261 (21%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
            GKV  +TGGT  IG  +  + ++ G  V  T R     +K         G  +++Q F 
Sbjct: 5   DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEK----AAKSVGTPDQIQFFQ 60

Query: 64  ADLNDPESFDAAIAG-------------CAGVIHVAAPIDIDGKETEEVMTQRAVNGTIG 110
            D +D + +                    AG+    +  +    E  +++    ++G   
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLL-AVNLDGVFF 119

Query: 111 ILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTK-- 168
             +  +     +R      G+++         + +                 +Y  +K  
Sbjct: 120 GTRLGI-----QRMKNKGLGASIINMSSIEGFVGDPSLG-------------AYNASKGA 161

Query: 169 --TLTERAALEFA-EEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILL 225
              +++ AAL+ A +++ + + T+ P ++  P +              + G  E  S   
Sbjct: 162 VRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLV------------DDLPGAEEAMSQRT 209

Query: 226 NISMVHI---DDVARAHIFLL 243
              M HI   +D+A   ++L 
Sbjct: 210 KTPMGHIGEPNDIAYICVYLA 230

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 41.2 bits (96), Expect = 8e-05
 Identities = 41/254 (16%), Positives = 69/254 (27%), Gaps = 35/254 (13%)

Query: 6   GKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA 64
            +V  VTG T  IG  +  RL   G  V    R +   +  L  L               
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV---EADGRTC 58

Query: 65  DLNDPESFDAAIA-------------GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGI 111
           D+      +A +A               AG     A  ++  +   +V+           
Sbjct: 59  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVT 118

Query: 112 LKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLT 171
            +     G ++R      G+    +            +      K  + G     TK L 
Sbjct: 119 KQVLKAGGMLER------GTGRIVNIASTGGKQGVVHAAPYSASKHGVVG----FTKAL- 167

Query: 172 ERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY--SILLNISM 229
               LE A   G+ +  + P FV  P                     +     + +    
Sbjct: 168 ---GLELA-RTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG-RY 222

Query: 230 VHIDDVARAHIFLL 243
           V   +VA    +L+
Sbjct: 223 VQPSEVAEMVAYLI 236

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 40.9 bits (95), Expect = 9e-05
 Identities = 22/88 (25%), Positives = 31/88 (35%), Gaps = 6/88 (6%)

Query: 5  KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
          KG    VTGG+  IG  ++  L   G  V T  R++ E  + L          E      
Sbjct: 5  KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSV--- 61

Query: 64 ADLNDPESFDAAIAGCAGVIHVAAPIDI 91
           DL      D  +   A V      ++I
Sbjct: 62 CDLLSRTERDKLMQTVAHVFD--GKLNI 87

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 6/88 (6%)

Query: 5  KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
          +G+V  VTGG+  +G  +   L + G  V    R+  E  +    LT   G       F 
Sbjct: 4  RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV--ETMAFR 61

Query: 64 ADLNDPESFDAAIAGCAGVIHVAAPIDI 91
           D+++ E           V      +D 
Sbjct: 62 CDVSNYEEVKKL---LEAVKEKFGKLDT 86

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 32/240 (13%), Positives = 71/240 (29%), Gaps = 26/240 (10%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
            GKV  V+GG   +G+  +  ++  G  V      D E K   + L      ++  +  +
Sbjct: 5   TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL------ADAARYVH 58

Query: 64  ADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKR 123
            D+  P  + AA       +     + +       +      +  +   +  L       
Sbjct: 59  LDVTQPAQWKAA---VDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGV 115

Query: 124 FVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG 183
           F+   +            +++ +             +  +    + LT+  ALE     G
Sbjct: 116 FLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG-PSG 174

Query: 184 LDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLL 243
           + + ++ P  V  P         V   +      R               +V+   ++L 
Sbjct: 175 IRVNSIHPGLVKTP-----MTDWVPEDIFQTALGR----------AAEPVEVSNLVVYLA 219

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 35/257 (13%), Positives = 79/257 (30%), Gaps = 49/257 (19%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
           +GKV  VTGG   +G  ++  LL  G  V  +  ++   ++  + L       ER     
Sbjct: 5   QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL------GERSMFVR 58

Query: 64  ADLNDPESFDAAIAG-------------CAGVIHVAAPIDIDGKETEEVMTQR---AVNG 107
            D++    +   +A               AG++          ++   ++         G
Sbjct: 59  HDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIG 118

Query: 108 TIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLT 167
               + +  ++G     + + S                                K+ V  
Sbjct: 119 CQQGIAAMKETGGSIINMASVSSWLPIEQYAGY------------------SASKAAVS- 159

Query: 168 KTLTERAALEFAEE-HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN 226
             LT  AAL   ++ + + + ++ P  +  P +       V   + +      +  +   
Sbjct: 160 -ALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVL-----HDPKLNRA 213

Query: 227 ISMVHIDDVARAHIFLL 243
                 + +A+  +FL 
Sbjct: 214 GRAYMPERIAQLVLFLA 230

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 4e-04
 Identities = 39/256 (15%), Positives = 76/256 (29%), Gaps = 55/256 (21%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
            G+   VTG    IG   +  L   G  V    R+  +       L +L      ++   
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQAD-------LDSLVRECPGIEPVC 58

Query: 64  ADLNDPESFDAAIA---------GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKS 114
            DL D E+ + A+            A V  +   +++  +  +    +  +   I + + 
Sbjct: 59  VDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSF-EVNLRAVIQVSQI 117

Query: 115 CLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTK----TL 170
             +    +                                ++       Y  TK     L
Sbjct: 118 VARGLIARGVPGA------------------IVNVSSQCSQRAVTNHSVYCSTKGALDML 159

Query: 171 TERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISM- 229
           T+  ALE    H + +  + P+ V+                A      +  ++L  I + 
Sbjct: 160 TKVMALELG-PHKIRVNAVNPTVVMTSM-----------GQATWSDPHKAKTMLNRIPLG 207

Query: 230 --VHIDDVARAHIFLL 243
               ++ V  A +FLL
Sbjct: 208 KFAEVEHVVNAILFLL 223

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 39.0 bits (90), Expect = 4e-04
 Identities = 38/244 (15%), Positives = 69/244 (28%), Gaps = 12/244 (4%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIF 62
           KGKV  VTG T  IG  +   L   G  +      D    + + + L    G   ++   
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV--KVLYD 60

Query: 63  NADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVK 122
            ADL+  E+           +     IDI         T    +       + L      
Sbjct: 61  GADLSKGEAVRGL---VDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSA 117

Query: 123 RFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH 182
            F  T++            +++               +  +       T+  ALE A   
Sbjct: 118 VFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETA-GQ 176

Query: 183 GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHI---DDVARAH 239
           G+    + P +V  P +  + +               E  +      +     + +    
Sbjct: 177 GITANAICPGWVRTPLVEKQISALAEKNGVDQETAAREL-LSEKQPSLQFVTPEQLGGTA 235

Query: 240 IFLL 243
           +FL 
Sbjct: 236 VFLA 239

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 38.8 bits (90), Expect = 4e-04
 Identities = 42/254 (16%), Positives = 68/254 (26%), Gaps = 52/254 (20%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
           K K   +TG    IG   +      G  +      +   ++    +   P          
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP--------VV 55

Query: 64  ADLNDPESFDAAIA-------------GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIG 110
            D+ DP S +   A               AG+        +  ++ E V+        + 
Sbjct: 56  MDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLV 115

Query: 111 ILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDY-IRKLDIWGKSYVLTKT 169
              +              + S VY                 +Y      + G    LT+T
Sbjct: 116 AKAASEAMREKNPGSIVLTASRVYLG----------NLGQANYAASMAGVVG----LTRT 161

Query: 170 LTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISM 229
           L    ALE     G+ + TL P F+                +A     R           
Sbjct: 162 L----ALELG-RWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGR----------A 206

Query: 230 VHIDDVARAHIFLL 243
               +VA A +FLL
Sbjct: 207 GKPLEVAYAALFLL 220

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 38.6 bits (89), Expect = 6e-04
 Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 5/88 (5%)

Query: 5  KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
            +V  +TGG   +G    +RL   G  ++    S    +   + +         +    
Sbjct: 3  TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLET-APDAEVLTTV 61

Query: 64 ADLNDPESFDAAIAGCAGVIHVAAPIDI 91
          AD++D    +A              ID 
Sbjct: 62 ADVSDEAQVEAY---VTATTERFGRIDG 86

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 9e-04
 Identities = 15/74 (20%), Positives = 22/74 (29%), Gaps = 2/74 (2%)

Query: 5  KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
           GKV  VTG    IG      LL  G  V     +     +  + L       ++     
Sbjct: 2  NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQ-FEPQKTLFIQ 60

Query: 64 ADLNDPESFDAAIA 77
           D+ D +       
Sbjct: 61 CDVADQQQLRDTFR 74

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (88), Expect = 0.001
 Identities = 41/254 (16%), Positives = 77/254 (30%), Gaps = 44/254 (17%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
            GKV  VTGG   IG+ ++   ++ G  V    + +   +        LPGA        
Sbjct: 5   AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRA---LEQELPGAV----FIL 57

Query: 64  ADLNDPESFDAAIAGCAGV-----IHVAAPIDIDGKETEEVMTQRAVNGTIGI-LKS-CL 116
            D+   +     ++            V         +  E  + +     + + L     
Sbjct: 58  CDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYT 117

Query: 117 KSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDY-IRKLDIWGKSYVLTKTLTERAA 175
            +     ++  S G+ +  S     +          Y   K  +      +TK L    A
Sbjct: 118 LTKLALPYLRKSQGNVINISSLVGAI---GQAQAVPYVATKGAVTA----MTKAL----A 166

Query: 176 LEFAEEHGLDLVTLIPSFVVGPFIC------PKFAGSVRSTLAMVLGNREEYSILLNISM 229
           L+ +  +G+ +  + P  +  P         P    S+R  +      R          M
Sbjct: 167 LDES-PYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGR----------M 215

Query: 230 VHIDDVARAHIFLL 243
               +V  A +FL 
Sbjct: 216 GQPAEVGAAAVFLA 229

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 145

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 36.7 bits (84), Expect = 0.001
 Identities = 17/121 (14%), Positives = 37/121 (30%)

Query: 7   KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL 66
           KV + G +G +GS   + L    +     +         L  L      +      +A++
Sbjct: 2   KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANI 61

Query: 67  NDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVY 126
                 +  I   + V+ + + +      +   + +          K   +    K FV 
Sbjct: 62  YVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI 121

Query: 127 T 127
           T
Sbjct: 122 T 122

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 37.4 bits (86), Expect = 0.001
 Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 8  VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN 67
          V VTG +  IG  + + L   G  V        +  +++S    +     +   F  D++
Sbjct: 4  VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVS--KQIEAYGGQAITFGGDVS 61

Query: 68 DPESFDAAIAGCA 80
               +A +    
Sbjct: 62 KEADVEAMMKTAI 74

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 13/76 (17%), Positives = 22/76 (28%), Gaps = 4/76 (5%)

Query: 5  KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
          + KV  VTG    IG  +   L      V    R+       +  + +          + 
Sbjct: 9  ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY---ESSGYA 65

Query: 64 ADLNDPESFDAAIAGC 79
           D++  E     I   
Sbjct: 66 GDVSKKEEISEVINKI 81

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 28/240 (11%), Positives = 69/240 (28%), Gaps = 26/240 (10%)

Query: 10  VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP 69
           VT    F G    +RL + G+ V        + K +L         +             
Sbjct: 5   VTNVKHFGGMGSALRLSEAGHTVACHDE-SFKQKDEL--------EAFAETYPQLKPMSE 55

Query: 70  ESFDAAIAGCA---GVIHV---AAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKR 123
           +     I       G + V         + +  ++        G +  L+          
Sbjct: 56  QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDK-YAVEDYRGAVEALQIRP------- 107

Query: 124 FVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHG 183
           F   ++ ++     K   ++  T  +     ++L  +  +     TL    + E   E+ 
Sbjct: 108 FALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELG-EYN 166

Query: 184 LDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLL 243
           + +  + P+++        +      T    + + ++    L   +    ++     FL 
Sbjct: 167 IPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKK-VTALQ-RLGTQKELGELVAFLA 224

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 15/74 (20%)

Query: 5  KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
            +   VTGG   IG  +  RL   G+ V  T R                GA + L    
Sbjct: 6  VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS--------------GAPKGLFGVE 51

Query: 64 ADLNDPESFDAAIA 77
           D+ D ++ D A  
Sbjct: 52 VDVTDSDAVDRAFT 65

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 36.3 bits (83), Expect = 0.003
 Identities = 40/244 (16%), Positives = 66/244 (27%), Gaps = 29/244 (11%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
           +GK+  VTG +  IG  +   L   G  V  T  S+   +    +L              
Sbjct: 3   EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDP 62

Query: 64  ADLNDPESFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKR 123
           A +        A  G   ++   A I  D         +        +      S  V R
Sbjct: 63  ASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMR 122

Query: 124 FVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTK----TLTERAALEFA 179
            +       +   G  V  +     +             +Y   K      ++  A E A
Sbjct: 123 AMMKKRHGRIITIGSVVGTMGNGGQA-------------NYAAAKAGLIGFSKSLAREVA 169

Query: 180 EEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAH 239
              G+ +  + P F+                LA V   R          +    ++A A 
Sbjct: 170 -SRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGR----------LGGAQEIANAV 218

Query: 240 IFLL 243
            FL 
Sbjct: 219 AFLA 222

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 12/103 (11%), Positives = 21/103 (20%), Gaps = 9/103 (8%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
             K        G IG      L+         +                P     +    
Sbjct: 4   TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKV--NITFHT 61

Query: 64  ADLNDPES-----FDAAIAGCAGV-IHVAAPIDIDGKETEEVM 100
            D+  P +               V I +     +D  + E  +
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTI 104

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 36.0 bits (82), Expect = 0.003
 Identities = 33/252 (13%), Positives = 66/252 (26%), Gaps = 42/252 (16%)

Query: 6   GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNAD 65
           GKV V GG G +GS ++     +GY V     S  +       +      +E+ Q     
Sbjct: 3   GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQ 62

Query: 66  LNDPESF---DAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVK 122
                     D       G    +A      K  + ++ Q   +  I    +        
Sbjct: 63  TASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGG 122

Query: 123 RFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFA-EE 181
               T + + +  +   +                     K+ V    LT   A + +   
Sbjct: 123 LLQLTGAAAAMGPTPSMIGY----------------GMAKAAVH--HLTSSLAAKDSGLP 164

Query: 182 HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIF 241
               ++T++P  +  P        +  S                  S   +  ++   + 
Sbjct: 165 DNSAVLTIMPVTLDTPMNRKWMPNADHS------------------SWTPLSFISEHLLK 206

Query: 242 LLEYPDAKGRYI 253
                 +  R  
Sbjct: 207 WTTETSS--RPS 216

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 35.9 bits (82), Expect = 0.004
 Identities = 38/245 (15%), Positives = 69/245 (28%), Gaps = 19/245 (7%)

Query: 5   KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN 63
            GK   +TG    IG       +  G  V     +    +   + +              
Sbjct: 4   DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI------GPAACAIA 57

Query: 64  ADLNDPESFDAAIAGCA---GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT 120
            D+ D  S D  +A      G I +             V   R     +  +     SGT
Sbjct: 58  LDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINV---SGT 114

Query: 121 VKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE 180
           +      +        G  +  +        + +  +    K+ V   +LT+ A L    
Sbjct: 115 LFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAV--ISLTQSAGLNLI- 171

Query: 181 EHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY--SILLNISMVHIDDVARA 238
            HG+++  + P  V G       A             + +   ++     M   +D+   
Sbjct: 172 RHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFG-RMGRAEDLTGM 230

Query: 239 HIFLL 243
            IFL 
Sbjct: 231 AIFLA 235

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 36.0 bits (82), Expect = 0.004
 Identities = 32/220 (14%), Positives = 62/220 (28%), Gaps = 27/220 (12%)

Query: 8   VCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNAD 65
           V VTG    IG  L+ +L+       +  T R D E   +L  + +      R+ +    
Sbjct: 6   VVVTGANRGIGLGLVQQLVKDKNIRHIIATAR-DVEKATELKSIKD-----SRVHVLPLT 59

Query: 66  LNDPESFDAAIAG---------------CAGVIHVAAPIDIDGKETEEVMTQRAVNGTIG 110
           +   +S D  ++                 AGV+          +              + 
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119

Query: 111 ILKSCL---KSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLT 167
           + +  L   K+   K      S S          +   T  +       +  +  S    
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAI 179

Query: 168 KTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSV 207
                  A++   +  + +V   P +V         A +V
Sbjct: 180 NMFGRTLAVDLK-DDNVLVVNFCPGWVQTNLGGKNAALTV 218

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	327
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	100.0
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	100.0
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.97
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.97
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.95
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.95
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.95
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.94
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.9
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.9
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.9
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.9
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.89
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.89
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.89
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.89
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.89
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.88
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.88
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.88
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.88
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.88
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.88
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.87
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.87
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.87
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.87
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.87
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.87
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.87
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.86
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.86
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.86
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.86
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.86
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.86
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.86
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.86
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.86
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.86
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.85
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.84
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.84
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.84
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.84
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.84
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.84
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.84
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.84
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.84
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.84
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.83
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.83
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.81
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.81
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.8
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.8
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.79
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.79
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.79
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.78
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.78
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.75
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.75
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.73
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.72
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.72
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.71
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.7
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.67
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.67
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.62
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.6
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.57
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.52
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.23
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.69
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.65
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.57
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.56
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.53
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.52
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.45
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.38
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.36
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.34
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.28
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	98.27
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	98.27
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.26
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	98.22
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.17
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	98.12
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	98.06
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	98.02
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	98.0
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.99
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.97
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.94
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.93
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.9
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.9
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.8
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.8
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.68
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.68
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.68
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.65
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.56
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.55
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.55
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.53
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.53
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.51
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.51
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.48
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.48
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.47
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.46
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.44
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.42
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.39
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.32
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.3
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.29
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.22
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.22
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.19
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.06
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.06
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.05
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.05
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.03
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.96
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.94
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.9
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.87
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.85
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.84
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.84
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.84
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.8
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.8
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.8
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.75
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.75
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.75
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.73
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.72
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.71
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	96.55
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	96.53
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.53
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	96.52
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.51
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.49
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.47
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.47
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.44
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.43
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.41
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.4
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.38
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.38
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.3
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.29
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.27
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	96.27
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.18
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.17
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.14
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.12
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	96.11
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.1
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	96.09
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.09
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.05
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.04
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.01
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	96.01
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	96.01
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.99
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.96
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	95.91
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.86
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.82
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.76
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.71
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.66
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.61
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.58
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.53
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	95.53
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.5
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.46
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.43
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.43
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.41
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.33
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.32
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	95.31
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.31
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	95.29
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	95.28
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.24
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.21
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	95.13
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	95.06
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	95.02
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.94
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.89
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	94.82
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	94.81
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	94.8
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	94.77
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.72
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.71
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	94.65
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.56
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.53
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	94.34
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.31
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.3
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	94.22
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.21
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.18
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	94.15
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.1
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	94.06
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.04
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	93.96
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	93.84
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	93.82
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.8
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	93.66
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.57
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.51
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.47
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.2
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.11
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.09
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.79
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	92.71
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	92.7
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	92.55
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	92.21
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	92.03
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	91.96
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	91.94
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	91.87
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	91.86
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.68
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	91.5
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	91.49
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	91.46
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	91.16
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.08
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	90.84
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	90.49
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	90.43
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	90.16
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	90.05
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	89.79
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	89.25
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	89.11
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	88.79
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	88.74
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	88.71
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	88.07
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	87.89
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	87.85
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	87.27
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	86.87
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	86.69
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	86.65
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	86.55
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	86.38
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	86.34
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	86.33
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	86.3
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	86.23
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	86.18
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	85.98
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	85.5
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	84.48
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	83.93
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	83.83
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	83.59
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	82.96
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	82.94
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	82.93
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	82.79
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	82.65
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	82.28
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	82.08
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	81.87
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	81.69
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	81.28
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.13
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	81.05
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	80.53
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	80.05
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	80.05

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=3e-49  Score=343.45  Aligned_cols=299  Identities=21%  Similarity=0.227  Sum_probs=234.8

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeE------EEEEcCCC-CCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFV------TTTVRSDP-EHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAG   78 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V------~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~   78 (327)
                      |||||||||||||++|+++|+++|++|      +.+++... .....+..+.    ...+++++.+|+.+..........
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~   76 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD----ADPRLRFVHGDIRDAGLLARELRG   76 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT----TCTTEEEEECCTTCHHHHHHHTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhh----cCCCeEEEEeccccchhhhccccc
Confidence            579999999999999999999998754      44444211 1222222221    236899999999999998888889


Q ss_pred             CCEEEEccCCCC--CCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhh
Q 020334           79 CAGVIHVAAPID--IDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRK  156 (327)
Q Consensus        79 ~d~vih~a~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~  156 (327)
                      +|.|+|+|+...  ....... +.+++|+.++.+++++|++.+ +++|||+||+++|+  .....+++|+++        
T Consensus        77 ~d~vi~~a~~~~~~~~~~~~~-~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~~yg--~~~~~~~~E~~~--------  144 (322)
T d1r6da_          77 VDAIVHFAAESHVDRSIAGAS-VFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYG--SIDSGSWTESSP--------  144 (322)
T ss_dssp             CCEEEECCSCCCHHHHHHCCH-HHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGC--CCSSSCBCTTSC--------
T ss_pred             cceEEeecccccccccccchH-HHhhhhHHHHHHHHHHHHHcC-CceEEEeecceeec--CCCCCCCCCCCC--------
Confidence            999999997654  1222333 788999999999999999988 89999999999996  556678899986        


Q ss_pred             cCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHH-HhCCccccc-cccC-CCeeeHH
Q 020334          157 LDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAM-VLGNREEYS-ILLN-ISMVHID  233 (327)
Q Consensus       157 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~-~~~i~v~  233 (327)
                       ..|.++|+.+|..+|.+++.++++++++++++||+++|||++..  ...+..++.. ..+++..+. .+.+ |+|+|++
T Consensus       145 -~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~--~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~  221 (322)
T d1r6da_         145 -LEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP--EKLIPLFVTNLLDGGTLPLYGDGANVREWVHTD  221 (322)
T ss_dssp             -CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT--TSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHH
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCc--CcHHHHHHHHHHcCCCcEEecCCCeEEccEEHH
Confidence             36788999999999999999999999999999999999998654  3455555544 455555543 3334 7999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCC-CCCcccccccccccChHHH-HhccccccccH
Q 020334          234 DVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNV-DSLSEIEGYKLSALSSKKL-LDICFTYKYGI  310 (327)
Q Consensus       234 D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~k~-~~lg~~p~~~~  310 (327)
                      |+|+++..+++++..+++||+ +++.+|+.|+++.+++.++.. .+.. .............+|++|+ +.|||+|++++
T Consensus       222 D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~  300 (322)
T d1r6da_         222 DHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGAD-WSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSF  300 (322)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCC-GGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCH
T ss_pred             HHHHHHHHHHhCCCCCCeeEEeecccchhHHHHHHHHHHhCCC-ccceeecCCCCCCCceeeeCHHHHHHHHCCCCCCCH
Confidence            999999999999888889996 678899999999999988721 1110 0111113344567899999 78999999999


Q ss_pred             HHHHHHHHHHHHHc
Q 020334          311 DEMFDGAIKCCKER  324 (327)
Q Consensus       311 ~~~l~~~~~~~~~~  324 (327)
                      +|+|+++++|++++
T Consensus       301 eegI~~~i~w~~~n  314 (322)
T d1r6da_         301 ADGLARTVRWYREN  314 (322)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999999974

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.3e-48  Score=342.32  Aligned_cols=304  Identities=15%  Similarity=0.134  Sum_probs=224.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC-CcchhhhhhCC-CCCCCCeEEEeCCCCChhHHHHHhc--CCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE-HKKDLSFLTNL-PGASERLQIFNADLNDPESFDAAIA--GCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~--~~d   80 (327)
                      .|++||||||||||++|+++|+++|++|++++|.... ....+..+... .....+++++++|++|.+++.++++  ++|
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCC
Confidence            3789999999999999999999999999999994321 12222222111 1123689999999999999999997  569


Q ss_pred             EEEEccCCCC--CCCCchHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCCCcccCCCCCChhHhhh
Q 020334           81 GVIHVAAPID--IDGKETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRK  156 (327)
Q Consensus        81 ~vih~a~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~  156 (327)
                      +|+|+|+..+  .+..++. .++++|+.++.+|+++|++.+  ..++|||+||++|||  .+...+++|+++        
T Consensus        81 ~v~h~aa~~~~~~~~~~~~-~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG--~~~~~~~~E~~~--------  149 (357)
T d1db3a_          81 EVYNLGAMSHVAVSFESPE-YTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYG--LVQEIPQKETTP--------  149 (357)
T ss_dssp             EEEECCCCCTTTTTTSCHH-HHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGT--TCCSSSBCTTSC--------
T ss_pred             EEEEeecccccchhhhCHH-HHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhC--CCCCCCcCCCCC--------
Confidence            9999998765  3344555 889999999999999999875  245899999999995  455678999986        


Q ss_pred             cCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC-chHHHH-HHHHhCCcccc--ccccC-CCeee
Q 020334          157 LDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA-GSVRST-LAMVLGNREEY--SILLN-ISMVH  231 (327)
Q Consensus       157 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~-~~~~~~-~~~~~~~~~~~--~~~~~-~~~i~  231 (327)
                       ..|.++|+.+|..+|.+++.++++++++++++||+++|||+...... ..+... .....++...+  +.+.+ ++|+|
T Consensus       150 -~~P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~  228 (357)
T d1db3a_         150 -FYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGH  228 (357)
T ss_dssp             -CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEE
T ss_pred             -CCCCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeeccee
Confidence             35688999999999999999999999999999999999997654322 222222 23334444332  22333 79999


Q ss_pred             HHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCC-C-------------------CCCCCCCc------
Q 020334          232 IDDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEY-P-------------------IPNVDSLS------  284 (327)
Q Consensus       232 v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~-~-------------------~~~~~~~~------  284 (327)
                      ++|+|+++..++++. .++.||+ +++.+|++|+++.+.+.++.. .                   .+......      
T Consensus       229 v~D~~~a~~~~~~~~-~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (357)
T d1db3a_         229 AKDYVKMQWMMLQQE-QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVD  307 (357)
T ss_dssp             HHHHHHHHHHTTSSS-SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEEC
T ss_pred             echHHHHHHHHHhCC-CCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeec
Confidence            999999999999875 4678986 678899999999999987610 0                   00000000      


Q ss_pred             ----ccccccccccChHHH-HhccccccccHHHHHHHHHHHH
Q 020334          285 ----EIEGYKLSALSSKKL-LDICFTYKYGIDEMFDGAIKCC  321 (327)
Q Consensus       285 ----~~~~~~~~~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~  321 (327)
                          +..+.....+|++|+ ++|||+|+++|+|+|+++++++
T Consensus       308 ~~~~r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~  349 (357)
T d1db3a_         308 PRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVAND  349 (357)
T ss_dssp             GGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred             cccCCCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence                001123356799999 8899999999999999998654

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-48  Score=335.03  Aligned_cols=299  Identities=17%  Similarity=0.196  Sum_probs=229.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +|||||||||||||++|+++|+++|++|++++|........+.....    ..++.....|+.+.     ++.++|+|||
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~----~~~~d~~~~~~~~~-----~~~~~d~Vih   71 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG----HENFELINHDVVEP-----LYIEVDQIYH   71 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTT----CTTEEEEECCTTSC-----CCCCCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcC----CCceEEEehHHHHH-----HHcCCCEEEE
Confidence            47999999999999999999999999999999844434333332222    24566666666543     4568999999


Q ss_pred             ccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           85 VAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        85 ~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      +|+....  +..++. +.+++|+.++.+|+++|++.+  .++||+||+++|+  .....+++|+......+    ..|.+
T Consensus        72 lAa~~~~~~~~~~~~-~~~~~Nv~g~~~ll~~~~~~~--~k~I~~SS~~vy~--~~~~~~~~e~~~~~~~~----~~p~~  142 (312)
T d2b69a1          72 LASPASPPNYMYNPI-KTLKTNTIGTLNMLGLAKRVG--ARLLLASTSEVYG--DPEVHPQSEDYWGHVNP----IGPRA  142 (312)
T ss_dssp             CCSCCSHHHHTTCHH-HHHHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGGB--SCSSSSBCTTCCCBCCS----SSTTH
T ss_pred             CcccCCchhHHhCHH-HHHHHHHHHHHHHHHHHHHcC--CcEEEEEChheec--CCCCCCCCccccCCCCC----CCCcc
Confidence            9997652  233444 889999999999999999987  4899999999996  44455667665432211    25678


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHH-HhCCccccc-cccC-CCeeeHHHHHHHH
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAM-VLGNREEYS-ILLN-ISMVHIDDVARAH  239 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~-~~~i~v~D~a~~~  239 (327)
                      +|+.+|.++|.+++.++++++++++++||++||||+........+..++.. ..++++.+. .+.+ ++|+|++|+++++
T Consensus       143 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~  222 (312)
T d2b69a1         143 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL  222 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHH
Confidence            999999999999999999999999999999999998776555566555544 566665543 3334 8999999999999


Q ss_pred             HHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCC-CCCCCCCCCcccccccccccChHHH-HhccccccccHHHHHHH
Q 020334          240 IFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPE-YPIPNVDSLSEIEGYKLSALSSKKL-LDICFTYKYGIDEMFDG  316 (327)
Q Consensus       240 ~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p~~~~~~~l~~  316 (327)
                      +.+++.. .++.||+ ++..+|+.|+++.+++.++. ..+..  ......+.....+|++|+ +.|||+|+++++++|++
T Consensus       223 ~~~~~~~-~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~~I~~  299 (312)
T d2b69a1         223 VALMNSN-VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQF--LSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNK  299 (312)
T ss_dssp             HHHHTSS-CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEE--ECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHH
T ss_pred             HHHHhhc-cCCceEecCCcccchhhHHHHHHHHhCCCCceEE--CCCCCCCCCeeeECHHHHHHHHCCCCCCCHHHHHHH
Confidence            9998765 5678986 67889999999999998872 11111  111113345677899999 88999999999999999


Q ss_pred             HHHHHHHc
Q 020334          317 AIKCCKER  324 (327)
Q Consensus       317 ~~~~~~~~  324 (327)
                      +++||+++
T Consensus       300 ~i~w~~~~  307 (312)
T d2b69a1         300 AIHYFRKE  307 (312)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999864

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.9e-48  Score=343.07  Aligned_cols=311  Identities=15%  Similarity=0.104  Sum_probs=226.7

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEE-EEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVT-TTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGV   82 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v   82 (327)
                      |||||||||||||++|+++|+++|++|+ ++++....  .....+.... ...+++++++|++|+..+.++++  ++|+|
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~--~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~V   77 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYA--GNLESLSDIS-ESNRYNFEHADICDSAEITRIFEQYQPDAV   77 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTT--CCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcc--ccHHHHHhhh-hcCCcEEEEccCCCHHHHHHHHHhCCCCEE
Confidence            4799999999999999999999999754 45542221  1122222221 13689999999999999998886  68999


Q ss_pred             EEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcC--------CccEEEEeccceeeeecCCCCCcccCCCCCC-h
Q 020334           83 IHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSG--------TVKRFVYTSSGSTVYFSGKDVDMLDETFWSD-E  151 (327)
Q Consensus        83 ih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~--------~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~-~  151 (327)
                      |||||....  +..++. .++++|+.++.+++++|++.+        .+++|||+||.++||..  ...+..|..... .
T Consensus        78 ihlAa~~~~~~~~~~p~-~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~--~~~~~~~~~~~~~~  154 (361)
T d1kewa_          78 MHLAAESHVDRSITGPA-AFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDL--PHPDEVENSVTLPL  154 (361)
T ss_dssp             EECCSCCCHHHHHHCTH-HHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCC--CCGGGSCTTSCCCC
T ss_pred             EECccccchhhHHhCHH-HHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCC--ccCCccccccCCCC
Confidence            999997542  223444 789999999999999998764        14599999999999733  222222111100 0


Q ss_pred             hHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHH-HhCCccccc-cccC-CC
Q 020334          152 DYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAM-VLGNREEYS-ILLN-IS  228 (327)
Q Consensus       152 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~-~~  228 (327)
                      ........|.++||.+|.++|.++..++++++++++++||++||||+...  ...+..++.. ..+++..+. .+.+ |+
T Consensus       155 ~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~--~~~i~~~i~~~~~g~~~~v~g~g~~~r~  232 (361)
T d1kewa_         155 FTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP--EKLIPLVILNALEGKPLPIYGKGDQIRD  232 (361)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT--TSHHHHHHHHHHHTCCEEEETTSCCEEE
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCc--CcHHHHHHHHHHcCCCcEEeCCCCeEEe
Confidence            00001136788999999999999999999999999999999999998654  3455555444 455555443 3334 89


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCC-C--CCCCCCCCc----ccccccccccChHHH-
Q 020334          229 MVHIDDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPE-Y--PIPNVDSLS----EIEGYKLSALSSKKL-  299 (327)
Q Consensus       229 ~i~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~-~--~~~~~~~~~----~~~~~~~~~~d~~k~-  299 (327)
                      |+|++|+|+++..++++...+++||+ +++.+|+.|+++.+.+.++. .  .........    .......+.+|++|+ 
T Consensus       233 ~i~v~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  312 (361)
T d1kewa_         233 WLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKIS  312 (361)
T ss_dssp             EEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHH
T ss_pred             CEEHHHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCceeeeCHHHHH
Confidence            99999999999999998888889997 56789999999999885541 1  000000000    112345678899999 


Q ss_pred             HhccccccccHHHHHHHHHHHHHHc
Q 020334          300 LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       300 ~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      +.|||+|+++++|+|+++++||+++
T Consensus       313 ~~lgw~P~~~l~e~i~~ti~w~~~n  337 (361)
T d1kewa_         313 RELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             HHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             HHHCCCCCCCHHHHHHHHHHHHHHh
Confidence            7899999999999999999999865

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=7.8e-48  Score=337.82  Aligned_cols=305  Identities=17%  Similarity=0.156  Sum_probs=231.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      +||+|||||||||||++|+++|+++|++|.+++++..........+...  ...+++++.+|+.|.+.+..++...+.|+
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~Di~d~~~~~~~~~~~~~v~   78 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAAKADAIV   78 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHh--hcCCeEEEEccCCCHHHHHHHHhhhhhhh
Confidence            3788999999999999999999999998777766433222222221111  13589999999999999999999999999


Q ss_pred             EccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCC----------CCCcccCCCCCCh
Q 020334           84 HVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGK----------DVDMLDETFWSDE  151 (327)
Q Consensus        84 h~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~----------~~~~~~E~~~~~~  151 (327)
                      |+|+....  ...++. ++++.|+.++.+++++++..+  .++|++||+.+|+....          ....++|.++   
T Consensus        79 ~~a~~~~~~~~~~~~~-~~~~~N~~g~~nll~~~~~~~--~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~---  152 (346)
T d1oc2a_          79 HYAAESHNDNSLNDPS-PFIHTNFIGTYTLLEAARKYD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETN---  152 (346)
T ss_dssp             ECCSCCCHHHHHHCCH-HHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSC---
T ss_pred             hhhhcccccchhhCcc-cceeeehHhHHhhhhhhcccc--ccccccccceEecccCccccccccccCcccccccCCC---
Confidence            99987552  223444 889999999999999999988  68999999999963211          1122333332   


Q ss_pred             hHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHH-HHHHhCCccccc-cccC-CC
Q 020334          152 DYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRST-LAMVLGNREEYS-ILLN-IS  228 (327)
Q Consensus       152 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~-~~  228 (327)
                            ..|.++|+.+|.++|.+++.++++++++++++||+++|||+...  ...+... .....+....+. .+.+ ++
T Consensus       153 ------~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~--~~~~~~~i~~~~~~~~~~i~~~g~~~r~  224 (346)
T d1oc2a_         153 ------YNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHI--EKFIPRQITNILAGIKPKLYGEGKNVRD  224 (346)
T ss_dssp             ------CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCT--TSHHHHHHHHHHHTCCCEEETTSCCEEE
T ss_pred             ------CCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCc--cchhHHHHHHHHcCCceeEeCCCCcccc
Confidence                  35678999999999999999999899999999999999997543  2333333 334455554443 3333 89


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHH-Hhccccc
Q 020334          229 MVHIDDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL-LDICFTY  306 (327)
Q Consensus       229 ~i~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p  306 (327)
                      |+|++|+|++++.+++++..++.||+ +++..++.++++.+.+.++..................+.+|++|+ +.|||+|
T Consensus       225 ~i~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~P  304 (346)
T d1oc2a_         225 WIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTP  304 (346)
T ss_dssp             CEEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCC
T ss_pred             ccchhhHHHHHHHHHhhcccCccccccccccccchHHHHHHHHHhCCCCcceEECCCCCCCCceeeeCHHHHHHHHCCCC
Confidence            99999999999999999888888875 678899999999999988843222210111112334566899999 8899999


Q ss_pred             cc-cHHHHHHHHHHHHHHc
Q 020334          307 KY-GIDEMFDGAIKCCKER  324 (327)
Q Consensus       307 ~~-~~~~~l~~~~~~~~~~  324 (327)
                      ++ +|+++|+++++|++++
T Consensus       305 ~~t~l~e~i~~ti~w~~~n  323 (346)
T d1oc2a_         305 QFTDFSEGLEETIQWYTDN  323 (346)
T ss_dssp             SCCCHHHHHHHHHHHHHHT
T ss_pred             cCCCHHHHHHHHHHHHHHH
Confidence            98 6999999999999874

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=3e-47  Score=333.45  Aligned_cols=307  Identities=18%  Similarity=0.132  Sum_probs=237.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCC--CCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLP--GASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      ++|+|||||||||||++|+++|+++|++|++++|........+.......  ....+++++.+|+.|...+......++.
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~   94 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY   94 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccc
Confidence            36799999999999999999999999999999984433332222111110  0125789999999999998888889999


Q ss_pred             EEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCC
Q 020334           82 VIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        82 vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |+|+++....  +..++. ..++.|+.++.+|+++|++.+ +++|||+||..+||  .....+++|+++         ..
T Consensus        95 v~~~~a~~~~~~~~~~~~-~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg--~~~~~~~~E~~~---------~~  161 (341)
T d1sb8a_          95 VLHQAALGSVPRSINDPI-TSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYG--DHPGLPKVEDTI---------GK  161 (341)
T ss_dssp             EEECCSCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGT--TCCCSSBCTTCC---------CC
T ss_pred             cccccccccccccccCcc-chhheeehhHHHHHHHHHhcC-CceEEEcccceeeC--CCCCCCccCCCC---------CC
Confidence            9999986542  233444 789999999999999999998 89999999999995  456678899987         36


Q ss_pred             CchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC--CchHHHHHHH-HhCCccccc-cccC-CCeeeHHH
Q 020334          160 WGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKF--AGSVRSTLAM-VLGNREEYS-ILLN-ISMVHIDD  234 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~--~~~~~~~~~~-~~~~~~~~~-~~~~-~~~i~v~D  234 (327)
                      |.+.|+.+|..+|.++..++++.+++++++||+++|||+..+..  ...+..+... ..++++.+. .+.+ ++|+|++|
T Consensus       162 p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D  241 (341)
T d1sb8a_         162 PLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIEN  241 (341)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEec
Confidence            78899999999999999999989999999999999999876432  3455555444 556665444 3334 89999999


Q ss_pred             HHHHHHHhhcCCC--CCceEEE-eccccCHHHHHHHHHHhCCCCCCCC--CCCCccc--ccccccccChHHH-Hhccccc
Q 020334          235 VARAHIFLLEYPD--AKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPN--VDSLSEI--EGYKLSALSSKKL-LDICFTY  306 (327)
Q Consensus       235 ~a~~~~~~~~~~~--~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~--~~~~~~~--~~~~~~~~d~~k~-~~lg~~p  306 (327)
                      +|+++..++....  .+++||+ ++...|+.|+++.+++.++....+.  .......  .+.....+|++|+ +.|||+|
T Consensus       242 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~p  321 (341)
T d1sb8a_         242 TVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAP  321 (341)
T ss_dssp             HHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCC
T ss_pred             cchhhhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccccccCCCCCCcCeeeeCHHHHHHHHCCCc
Confidence            9999999887643  3568886 5678999999999998776222221  0011111  2344567899999 7799999


Q ss_pred             cccHHHHHHHHHHHHHH
Q 020334          307 KYGIDEMFDGAIKCCKE  323 (327)
Q Consensus       307 ~~~~~~~l~~~~~~~~~  323 (327)
                      +++++++|+++++||++
T Consensus       322 ~~sl~~gi~~ti~wy~~  338 (341)
T d1sb8a_         322 KYDVSAGVALAMPWYIM  338 (341)
T ss_dssp             CCCHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHH
Confidence            99999999999999986

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.9e-47  Score=329.66  Aligned_cols=304  Identities=17%  Similarity=0.194  Sum_probs=226.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi   83 (327)
                      |||||||||||||++|++.|+++|++|++++|................  ..+++++++|++|.+.+.++++  ++|+||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi   78 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc--CCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence            569999999999999999999999999999884333222222211110  2479999999999999999987  799999


Q ss_pred             EccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           84 HVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        84 h~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      |+||....  +..++. +++++|+.++.+++++|++.+ +++||++||..+|+  .....+..|+++.        ..|.
T Consensus        79 HlAa~~~~~~~~~~~~-~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~vy~--~~~~~~~~e~~~~--------~~p~  146 (338)
T d1udca_          79 HFAGLKAVGESVQKPL-EYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYG--DQPKIPYVESFPT--------GTPQ  146 (338)
T ss_dssp             ECCSCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGC--SCCSSSBCTTSCC--------CCCS
T ss_pred             ECCCccchhhHHhCHH-HHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceEEc--ccccccccccccc--------CCCc
Confidence            99996542  223444 889999999999999999998 99999999999985  3334444454431        3568


Q ss_pred             hhhHhhhHHHHHHHHHHHHHc-CCcEEEEecCceecCCCCCCC--------CchHHHHHHHHhCCccccc---------c
Q 020334          162 KSYVLTKTLTERAALEFAEEH-GLDLVTLIPSFVVGPFICPKF--------AGSVRSTLAMVLGNREEYS---------I  223 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~R~~~v~G~~~~~~~--------~~~~~~~~~~~~~~~~~~~---------~  223 (327)
                      ++|+.+|..+|.++..+..+. +++++++||+++|||+.....        ...+..+.....+....+.         .
T Consensus       147 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~  226 (338)
T d1udca_         147 SPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTED  226 (338)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTT
T ss_pred             chHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCC
Confidence            899999999999999777654 899999999999999754321        2344455554444432222         1


Q ss_pred             ccC-CCeeeHHHHHHHHHHhhcCC---CCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHH
Q 020334          224 LLN-ISMVHIDDVARAHIFLLEYP---DAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKK  298 (327)
Q Consensus       224 ~~~-~~~i~v~D~a~~~~~~~~~~---~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k  298 (327)
                      +.+ ++|+|++|++.++..+....   ..+++||+ +++.+|+.|+++.+.+.++. .++...............+|++|
T Consensus       227 g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k  305 (338)
T d1udca_         227 GTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGK-PVNYHFAPRREGDLPAYWADASK  305 (338)
T ss_dssp             SSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTS-CCCEEEECCCTTCCSBCCBCCHH
T ss_pred             CCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCC-CCceEECCCCCCCCCEeeECHHH
Confidence            233 79999999998887766532   23458997 56779999999999998872 22210011111234556789999


Q ss_pred             H-HhccccccccHHHHHHHHHHHHHHc
Q 020334          299 L-LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       299 ~-~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      + +.|||+|+++++|+|+++++|++++
T Consensus       306 ~~~~lgwkp~~~l~egi~~ti~w~~~~  332 (338)
T d1udca_         306 ADRELNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_dssp             HHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHCCCcCCCHHHHHHHHHHHHHhc
Confidence            9 7899999999999999999999987

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.5e-46  Score=330.38  Aligned_cols=306  Identities=18%  Similarity=0.152  Sum_probs=228.2

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      |. ++|||||||||||||++|+++|+++||+|++++|.........         ....++..+|+.+.+.+.++++++|
T Consensus        12 ~~-~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~d   81 (363)
T d2c5aa1          12 PS-ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED---------MFCDEFHLVDLRVMENCLKVTEGVD   81 (363)
T ss_dssp             TT-SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG---------GTCSEEEECCTTSHHHHHHHHTTCS
T ss_pred             CC-CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhh---------cccCcEEEeechhHHHHHHHhhcCC
Confidence            44 4678999999999999999999999999999998443322111         1356888999999999999999999


Q ss_pred             EEEEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcC
Q 020334           81 GVIHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLD  158 (327)
Q Consensus        81 ~vih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~  158 (327)
                      +|||+|+.....  ...........|+.++.++++++++.+ +++|||+||+.+|+..  ...+.+|......+.  ...
T Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~~~~~~--~~~~~~~~~~~~~e~--~~~  156 (363)
T d2c5aa1          82 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEF--KQLETTNVSLKESDA--WPA  156 (363)
T ss_dssp             EEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGG--GSSSSSSCEECGGGG--SSB
T ss_pred             eEeecccccccccccccccccccccccchhhHHHHhHHhhC-cccccccccccccccc--ccccccccccccccC--CcC
Confidence            999999865532  123334889999999999999999998 9999999999999633  223333332111110  113


Q ss_pred             CCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--chHHHHH-HHH-hCCc-cccccccC-CCeeeH
Q 020334          159 IWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA--GSVRSTL-AMV-LGNR-EEYSILLN-ISMVHI  232 (327)
Q Consensus       159 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~--~~~~~~~-~~~-~~~~-~~~~~~~~-~~~i~v  232 (327)
                      .|.++|+.+|..+|++++.+.+++|++++++||+++|||+......  ....... ... .... ..++.+.+ |+|+|+
T Consensus       157 ~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v  236 (363)
T d2c5aa1         157 EPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFI  236 (363)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeeh
Confidence            5678999999999999999999899999999999999997654322  1222222 222 2222 22333334 899999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHH-HhccccccccH
Q 020334          233 DDVARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL-LDICFTYKYGI  310 (327)
Q Consensus       233 ~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p~~~~  310 (327)
                      +|++++++.+++.. .++.||+ ++..+|+.|+++.+.+..+. ..+.. ............+|++|+ +.|||+|+++|
T Consensus       237 ~D~~~~~~~~~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~g~-~~~i~-~~~~~~~~~~~~~d~ska~~~LGw~p~~sl  313 (363)
T d2c5aa1         237 DECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEK-KLPIH-HIPGPEGVRGRNSDNNLIKEKLGWAPNMRL  313 (363)
T ss_dssp             HHHHHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTC-CCCEE-EECCCCCCSBCEECCHHHHHHHSCCCCCCH
T ss_pred             hHHHHHHHHHHhCC-CCCeEEEecCCcccHHHHHHHHHHHhCC-CCceE-eCCCCCCccccccCHHHHHHHhCCCCCCCH
Confidence            99999999998875 5778986 67899999999999998873 11210 111112344566899999 88999999999


Q ss_pred             HHHHHHHHHHHHHc
Q 020334          311 DEMFDGAIKCCKER  324 (327)
Q Consensus       311 ~~~l~~~~~~~~~~  324 (327)
                      +|+|+++++||+++
T Consensus       314 eegi~~ti~w~~~~  327 (363)
T d2c5aa1         314 KEGLRITYFWIKEQ  327 (363)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999999764

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=9e-46  Score=321.38  Aligned_cols=301  Identities=17%  Similarity=0.115  Sum_probs=229.7

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC-cchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH-KKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGV   82 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v   82 (327)
                      |+|||||||||||++|+++|+++||+|++++|..... ...+..+..    .++++++.+|++|.+.+.+.+.  ..+++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   76 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI----EGDIQYEDGDMADACSVQRAVIKAQPQEV   76 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC----GGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcc----cCCcEEEEccccChHHhhhhhcccccccc
Confidence            6899999999999999999999999999999954322 222333321    2578999999999999988776  56889


Q ss_pred             EEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           83 IHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        83 ih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      +|+|+....  ...++. .++..|+.++.++++++++.+..++|++.||..+|+  .....+.+|+++         ..|
T Consensus        77 ~~~a~~~~~~~~~~~~~-~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~--~~~~~~~~E~~~---------~~p  144 (321)
T d1rpna_          77 YNLAAQSFVGASWNQPV-TTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFG--LIQAERQDENTP---------FYP  144 (321)
T ss_dssp             EECCSCCCHHHHTTSHH-HHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGC--SCSSSSBCTTSC---------CCC
T ss_pred             ccccccccccccccchH-HHHhhhhhchHHHHHHHHHhCCCcccccccchhhcC--cccCCCCCCCCC---------ccc
Confidence            999876552  223444 889999999999999999988566888888888774  455667788876         367


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC-chH-HHHHHHHhCCccc--cccccC-CCeeeHHHH
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA-GSV-RSTLAMVLGNREE--YSILLN-ISMVHIDDV  235 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~-~~~-~~~~~~~~~~~~~--~~~~~~-~~~i~v~D~  235 (327)
                      .++|+.+|.++|.++..++++++++++++||+++|||....... ..+ ..+.+...++...  ++.+.+ |+|+|++|+
T Consensus       145 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~  224 (321)
T d1rpna_         145 RSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDY  224 (321)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHH
T ss_pred             cChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHH
Confidence            88999999999999999999999999999999999997554321 122 2333334444433  333334 799999999


Q ss_pred             HHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCC---cccccccccccChHHH-HhccccccccH
Q 020334          236 ARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSL---SEIEGYKLSALSSKKL-LDICFTYKYGI  310 (327)
Q Consensus       236 a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~k~-~~lg~~p~~~~  310 (327)
                      |+++..+++++. ++.||+ +++..|+.++++.+.+..+..........   .+..+...+..|++|+ +.|||+|+++|
T Consensus       225 ~~~~~~~~~~~~-~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k~lG~~P~~~l  303 (321)
T d1rpna_         225 VEAMWLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSL  303 (321)
T ss_dssp             HHHHHHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCH
T ss_pred             HHHHHHHHhcCC-cCCceecccccceehhhhHHHHHHhCCCccceeecCCCCCCCCccCCccCCHHHHHHHHCCCcCCCH
Confidence            999999998875 567775 67889999999999998872111110011   1112344567899999 77999999999


Q ss_pred             HHHHHHHHHHHHH
Q 020334          311 DEMFDGAIKCCKE  323 (327)
Q Consensus       311 ~~~l~~~~~~~~~  323 (327)
                      +|+|+++++|+.+
T Consensus       304 ~e~i~~tv~~~l~  316 (321)
T d1rpna_         304 DELIRMMVEADLR  316 (321)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999865

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-44  Score=317.62  Aligned_cols=307  Identities=18%  Similarity=0.191  Sum_probs=224.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC------CcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE------HKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      |.|||||||||||||++|+++|+++|++|+++++....      .......+...  ...++.++.+|++|.+.+.+++.
T Consensus         1 M~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~   78 (346)
T d1ek6a_           1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL--TGRSVEFEEMDILDQGALQRLFK   78 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH--HTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh--cCCCcEEEEeecccccccccccc
Confidence            45899999999999999999999999999999862111      11111111111  12578999999999999998776


Q ss_pred             --CCCEEEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhH
Q 020334           78 --GCAGVIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDY  153 (327)
Q Consensus        78 --~~d~vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~  153 (327)
                        .+++|+|+||..+.  ...++. +.++.|+.++.++++++++.+ +++|+|+||+.+|+..... ....+...     
T Consensus        79 ~~~~~~i~h~Aa~~~~~~~~~~p~-~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~~~~~~~~-~~~~~~~~-----  150 (346)
T d1ek6a_          79 KYSFMAVIHFAGLKAVGESVQKPL-DYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYL-PLDEAHPT-----  150 (346)
T ss_dssp             HCCEEEEEECCSCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSS-SBCTTSCC-----
T ss_pred             ccccccccccccccCcHhhHhCHH-HHHHhhhcccccccchhhhcC-cccccccccceeeeccccc-cccccccc-----
Confidence              46789999997652  223444 889999999999999999998 9999999999999743222 22222211     


Q ss_pred             hhhcCCCchhhHhhhHHHHHHHHHHHHHc-CCcEEEEecCceecCCCCCC--------CCchHHHHHHHHhCCccc----
Q 020334          154 IRKLDIWGKSYVLTKTLTERAALEFAEEH-GLDLVTLIPSFVVGPFICPK--------FAGSVRSTLAMVLGNREE----  220 (327)
Q Consensus       154 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~R~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~----  220 (327)
                          ..+.++|+.+|..+|+.+..+++.. +++.+++||+.+|||.....        ....+..+.....+....    
T Consensus       151 ----~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~  226 (346)
T d1ek6a_         151 ----GGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVF  226 (346)
T ss_dssp             ----CCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEE
T ss_pred             ----cccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEc
Confidence                3567889999999999999988764 89999999999999965421        122344444444433322    


Q ss_pred             -----cccccC-CCeeeHHHHHHHHHHhhcC---CCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCccccccc
Q 020334          221 -----YSILLN-ISMVHIDDVARAHIFLLEY---PDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYK  290 (327)
Q Consensus       221 -----~~~~~~-~~~i~v~D~a~~~~~~~~~---~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~  290 (327)
                           ...+.+ |+|+|++|+|+++..++..   ...+++||+ ++..+|+.|+++.+++.++. ..+......+..+..
T Consensus       227 g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~-~~~~~~~~~~~~e~~  305 (346)
T d1ek6a_         227 GNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGK-KIPYKVVARREGDVA  305 (346)
T ss_dssp             CSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCS-CCCEEEECCCTTCCS
T ss_pred             CCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCC-CCCeEECCCCCCCCC
Confidence                 222333 7999999999999887544   333458996 56789999999999999882 222200111113345


Q ss_pred             ccccChHHH-HhccccccccHHHHHHHHHHHHHHcC
Q 020334          291 LSALSSKKL-LDICFTYKYGIDEMFDGAIKCCKERG  325 (327)
Q Consensus       291 ~~~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~~  325 (327)
                      ...+|++|+ +.|||+|+++++|+|+++++|++++.
T Consensus       306 ~~~~d~~k~~~~lgw~p~~slee~I~~~i~w~~~n~  341 (346)
T d1ek6a_         306 ACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNP  341 (346)
T ss_dssp             EECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             EeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCH
Confidence            567899999 77999999999999999999999864

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.1e-44  Score=317.75  Aligned_cols=306  Identities=17%  Similarity=0.175  Sum_probs=226.4

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi   83 (327)
                      |.|||||||||||++|+++|+++|++|+++++................  ..+++++.+|++|.+.+.+++.  ++|+||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   79 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEYKIDSVI   79 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc--ccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence            569999999999999999999999999999873333222222111110  2578999999999999998876  799999


Q ss_pred             EccCCCC--CCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCC--CCCcccCCCCCChhHhhhcCC
Q 020334           84 HVAAPID--IDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGK--DVDMLDETFWSDEDYIRKLDI  159 (327)
Q Consensus        84 h~a~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~--~~~~~~E~~~~~~~~~~~~~~  159 (327)
                      |+||...  .....+. .+..+|+.++.+++++|++.+ +++|||+||..+||....  ...+++|+++         ..
T Consensus        80 hlAa~~~~~~~~~~~~-~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~---------~~  148 (347)
T d1z45a2          80 HFAGLKAVGESTQIPL-RYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECP---------LG  148 (347)
T ss_dssp             ECCSCCCHHHHHHSHH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSC---------CC
T ss_pred             EccccccccccccCcc-cccccchhhhHHHHHHHHhcc-cceEEeecceeeecCcccCCCCCccccccC---------CC
Confidence            9999765  2222333 788999999999999999998 999999999999974322  3356777765         35


Q ss_pred             CchhhHhhhHHHHHHHHHHHHH--cCCcEEEEecCceecCCCCCC--------CCchHHHHHHHHhCCcccccc------
Q 020334          160 WGKSYVLTKTLTERAALEFAEE--HGLDLVTLIPSFVVGPFICPK--------FAGSVRSTLAMVLGNREEYSI------  223 (327)
Q Consensus       160 ~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~i~R~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~------  223 (327)
                      |.++|+.+|.++|++++.+.+.  .+++++++||+++||+.....        ....+..+.....++...+..      
T Consensus       149 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~  228 (347)
T d1z45a2         149 PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYD  228 (347)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC-----
T ss_pred             CCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCcc
Confidence            6789999999999999998764  489999999999999864321        123454555555444332221      


Q ss_pred             ---ccC-CCeeeHHHHHHHHHHhhcCC-------CCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccc
Q 020334          224 ---LLN-ISMVHIDDVARAHIFLLEYP-------DAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKL  291 (327)
Q Consensus       224 ---~~~-~~~i~v~D~a~~~~~~~~~~-------~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~  291 (327)
                         +.. +|++++.|.+.+++.+++..       ...++||+ +++++|+.|+++.+.+.++. +.+......+..+...
T Consensus       229 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~  307 (347)
T d1z45a2         229 SRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGI-DLPYKVTGRRAGDVLN  307 (347)
T ss_dssp             -CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTC-CCCC---------CCC
T ss_pred             ccCCceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCC-CCceEeCCCCCCCCCE
Confidence               112 68999999999998887631       12357887 67889999999999998882 2222101111234456


Q ss_pred             cccChHHH-HhccccccccHHHHHHHHHHHHHHcC
Q 020334          292 SALSSKKL-LDICFTYKYGIDEMFDGAIKCCKERG  325 (327)
Q Consensus       292 ~~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~~  325 (327)
                      ..+|++|+ ++|||+|+++|+|+|+++++|++++.
T Consensus       308 ~~~d~sk~~~~lGw~p~~~lee~i~~ti~w~~~np  342 (347)
T d1z45a2         308 LTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENP  342 (347)
T ss_dssp             CCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             eeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHhCh
Confidence            67899999 88999999999999999999999864

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-44  Score=315.00  Aligned_cols=303  Identities=18%  Similarity=0.142  Sum_probs=221.7

Q ss_pred             CeE-EEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC-CcchhhhhhCCC--CCCCCeEEEeCCCCChhHHHHHhc--CC
Q 020334            6 GKV-CVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE-HKKDLSFLTNLP--GASERLQIFNADLNDPESFDAAIA--GC   79 (327)
Q Consensus         6 ~~i-lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~--~~   79 (327)
                      ||| ||||||||||++|+++|+++||+|++++|..+. ....+..+....  ....+++++.+|++|++.+..++.  ++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            578 999999999999999999999999999994322 223333322211  113578999999999999999886  67


Q ss_pred             CEEEEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcC--CccEEEEeccceeeeecCCCCCcccCCCCCChhHhh
Q 020334           80 AGVIHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSG--TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIR  155 (327)
Q Consensus        80 d~vih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~  155 (327)
                      ++|+|+++....  ...... .++++|+.++.++++++++.+  ..++|||+||++|||  .+...+++|+++       
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~-~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg--~~~~~~~~E~~~-------  150 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAE-YTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYG--KVQEIPQKETTP-------  150 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHH-HHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTC--SCSSSSBCTTSC-------
T ss_pred             ceeeeeeeccccchhhccch-hhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheec--CCCCCCCCCCCC-------
Confidence            899999986542  122333 678999999999999999876  245899999999996  456678899986       


Q ss_pred             hcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC-c-hHHHHHHHHhCCc-cc-cccccC-CCee
Q 020334          156 KLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA-G-SVRSTLAMVLGNR-EE-YSILLN-ISMV  230 (327)
Q Consensus       156 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~-~-~~~~~~~~~~~~~-~~-~~~~~~-~~~i  230 (327)
                        ..|.++||.||..+|+++..++++++++++++||+++|||+...... . ....+.....+.. .. ++.+.+ ++|+
T Consensus       151 --~~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i  228 (347)
T d1t2aa_         151 --FYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWG  228 (347)
T ss_dssp             --CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCE
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeee
Confidence              36788999999999999999999899999999999999997554321 1 1222233333333 22 233333 8999


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEE-EeccccCHHHHHHHHHHhCCCCCCC---CCC------CCcc-----------cccc
Q 020334          231 HIDDVARAHIFLLEYPDAKGRYI-CSSAKLTIQEMAEFLSAKHPEYPIP---NVD------SLSE-----------IEGY  289 (327)
Q Consensus       231 ~v~D~a~~~~~~~~~~~~~~~y~-~~~~~~s~~e~~~~i~~~~~~~~~~---~~~------~~~~-----------~~~~  289 (327)
                      |++|+++++..++++... +.|+ ..+...++++....+....+.....   ...      ....           ....
T Consensus       229 ~v~D~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~  307 (347)
T d1t2aa_         229 HAKDYVEAMWLMLQNDEP-EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEV  307 (347)
T ss_dssp             EHHHHHHHHHHHHHSSSC-CCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCC
T ss_pred             EecHHHHHHHHHhhcCCC-ccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCc
Confidence            999999999999998754 4555 5677899999999888876621100   000      0000           0112


Q ss_pred             cccccChHHH-HhccccccccHHHHHHHHHHHH
Q 020334          290 KLSALSSKKL-LDICFTYKYGIDEMFDGAIKCC  321 (327)
Q Consensus       290 ~~~~~d~~k~-~~lg~~p~~~~~~~l~~~~~~~  321 (327)
                      ..+.+|++|+ +.|||+|+++|+|+|++++++.
T Consensus       308 ~~~~~d~skak~~Lgw~P~~sl~e~i~~~I~~~  340 (347)
T d1t2aa_         308 DFLQGDCTKAKQKLNWKPRVAFDELVREMVHAD  340 (347)
T ss_dssp             CBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred             CEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence            3456799999 8899999999999999998653

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.9e-44  Score=315.70  Aligned_cols=304  Identities=17%  Similarity=0.190  Sum_probs=221.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHH-HhcCCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDA-AIAGCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d~vi   83 (327)
                      |||||||||||||++|+++|+++| ++|+++++..+ ...   .+..    .++++++.+|+++.+.+.+ +++++|+||
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~-~~~---~~~~----~~~~~~i~~Di~~~~~~~~~~~~~~d~Vi   72 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSD-AIS---RFLN----HPHFHFVEGDISIHSEWIEYHVKKCDVVL   72 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCG-GGG---GGTT----CTTEEEEECCTTTCSHHHHHHHHHCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCc-chh---hhcc----CCCeEEEECccCChHHHHHHHHhCCCccc
Confidence            479999999999999999999998 58999988432 211   1111    3689999999998766654 666899999


Q ss_pred             EccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           84 HVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        84 h~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      |+|+....  ....+. ..+..|+.++.++++++++.+  .+++++||+.+|+  .......+|..+...  ..+...|.
T Consensus        73 h~a~~~~~~~~~~~~~-~~~~~nv~gt~~ll~~~~~~~--~~~~~~ss~~~~~--~~~~~~~~~~~~~~~--~~~~~~p~  145 (342)
T d2blla1          73 PLVAIATPIEYTRNPL-RVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYG--MCSDKYFDEDHSNLI--VGPVNKPR  145 (342)
T ss_dssp             ECBCCCCHHHHHHSHH-HHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGB--TCCCSSBCTTTCCCB--CCCTTCGG
T ss_pred             cccccccccccccCCc-ccccccccccccccccccccc--ccccccccccccc--ccccccccccccccc--ccccCCCc
Confidence            99997652  122333 789999999999999999987  5678899999986  333333444332111  11224567


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC------CchHHHHH-HHHhCCcccccccc-C-CCeeeH
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKF------AGSVRSTL-AMVLGNREEYSILL-N-ISMVHI  232 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~-~-~~~i~v  232 (327)
                      +.|+.+|.++|+++..++++++++++++||+.+|||......      ...+..+. ....+++..+...+ + ++|+|+
T Consensus       146 ~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v  225 (342)
T d2blla1         146 WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI  225 (342)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEH
T ss_pred             chhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeeccc
Confidence            889999999999999999999999999999999999754422      12233333 44566665544433 3 899999


Q ss_pred             HHHHHHHHHhhcCCC---CCceEEE-eccc-cCHHHHHHHHHHhCCCC----CCCCCCCCc-----cc-----ccccccc
Q 020334          233 DDVARAHIFLLEYPD---AKGRYIC-SSAK-LTIQEMAEFLSAKHPEY----PIPNVDSLS-----EI-----EGYKLSA  293 (327)
Q Consensus       233 ~D~a~~~~~~~~~~~---~~~~y~~-~~~~-~s~~e~~~~i~~~~~~~----~~~~~~~~~-----~~-----~~~~~~~  293 (327)
                      +|+|+++..+++++.   .+++||+ +++. +|+.|+++.+++..+..    ..+......     ..     .......
T Consensus       226 ~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (342)
T d2blla1         226 RDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRK  305 (342)
T ss_dssp             HHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCC
T ss_pred             ccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccccccccc
Confidence            999999999998743   3458997 4554 89999999998876521    111110000     00     1233456


Q ss_pred             cChHHH-HhccccccccHHHHHHHHHHHHHHc
Q 020334          294 LSSKKL-LDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       294 ~d~~k~-~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      +|++|+ +.|||+|+++++|+|+++++||+++
T Consensus       306 ~d~~k~~~~lgw~P~~sleegl~~ti~~y~~~  337 (342)
T d2blla1         306 PSIRNAHRCLDWEPKIDMQETIDETLDFFLRT  337 (342)
T ss_dssp             BCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHCCCcCCCHHHHHHHHHHHHHhC
Confidence            799999 7899999999999999999999875

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.3e-44  Score=313.80  Aligned_cols=306  Identities=15%  Similarity=0.096  Sum_probs=226.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCC-CcchhhhhhCCCC--CCCCeEEEeCCCCChhHHHHHhc--CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPE-HKKDLSFLTNLPG--ASERLQIFNADLNDPESFDAAIA--GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~--~~   79 (327)
                      +|++||||||||||+||+++|+++||+|++++|..+. ....+..+.....  ....++++.+|+.+.+.+.+.++  ++
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            4789999999999999999999999999999994321 2222222221110  12468899999999999988875  68


Q ss_pred             CEEEEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcC----CccEEEEeccceeeeecCCCCCcccCCCCCChhH
Q 020334           80 AGVIHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSG----TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDY  153 (327)
Q Consensus        80 d~vih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~----~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~  153 (327)
                      |+|||+|+.....  ..++. ..+..|+.++.+++++++...    ...++++.||+.+++   ....+++|+++     
T Consensus        81 D~Vih~Aa~~~~~~~~~~p~-~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~---~~~~~~~E~~~-----  151 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEIPD-YTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFG---STPPPQSETTP-----  151 (339)
T ss_dssp             SEEEECCSCCCHHHHHHSHH-HHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGT---TSCSSBCTTSC-----
T ss_pred             chhhhccccccccccccCcc-ccccccccccchhhhhhhhcccccccceeeeecccceecc---cCCCCCCCCCC-----
Confidence            9999999976522  23444 788999999999999988643    234788888877663   34567888886     


Q ss_pred             hhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC-chHH-HHHHHHhCCc-cccc-cccC-CC
Q 020334          154 IRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA-GSVR-STLAMVLGNR-EEYS-ILLN-IS  228 (327)
Q Consensus       154 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~-~~~~-~~~~~~~~~~-~~~~-~~~~-~~  228 (327)
                          ..|.+.|+.+|..+|.++..++++++++++++||++||||+...... ..+. .......+.. ..+. .+.+ |+
T Consensus       152 ----~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd  227 (339)
T d1n7ha_         152 ----FHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRD  227 (339)
T ss_dssp             ----CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEE
T ss_pred             ----CCCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCcccc
Confidence                36788999999999999999999999999999999999997654321 1222 2223333333 2222 2333 79


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCCC---CCCCCCcccccccccccChHHH-Hhccc
Q 020334          229 MVHIDDVARAHIFLLEYPDAKGRYICSSAKLTIQEMAEFLSAKHPEYPI---PNVDSLSEIEGYKLSALSSKKL-LDICF  304 (327)
Q Consensus       229 ~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~e~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~k~-~~lg~  304 (327)
                      |+|++|+|+++..+++++..++.+++.+...|+.++++.+.+.++....   .......+......+..|++|+ +.|||
T Consensus       228 ~~~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~~Kak~~LGw  307 (339)
T d1n7ha_         228 WGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGW  307 (339)
T ss_dssp             CEEHHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCC
T ss_pred             ceeeehHHHHHHHHHhcCCCCccccccccccccchhhhhhhhhhhcccCceeeeccCCCCCCCCCeeeECHHHHHHHHCC
Confidence            9999999999999999987666667788889999999999998872111   1000111112334566799999 88999


Q ss_pred             cccccHHHHHHHHHHHHHH
Q 020334          305 TYKYGIDEMFDGAIKCCKE  323 (327)
Q Consensus       305 ~p~~~~~~~l~~~~~~~~~  323 (327)
                      +|+++|+++|+++++|+++
T Consensus       308 ~P~~~le~gi~~ti~~~~~  326 (339)
T d1n7ha_         308 KPQVGFEKLVKMMVDEDLE  326 (339)
T ss_dssp             CCCSCHHHHHHHHHHHHHH
T ss_pred             CcCCCHHHHHHHHHHHHHH
Confidence            9999999999999999965

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4e-44  Score=310.16  Aligned_cols=289  Identities=15%  Similarity=0.135  Sum_probs=215.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v   82 (327)
                      +|||||||||||||++|+++|+++|+.|++++++.                       ..|+.|.+.+.+++.  ++|.|
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~d~v   58 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDFFASERIDQV   58 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-----------------------hccccCHHHHHHHHhhcCCCEE
Confidence            67999999999999999999999999988765511                       168999999988876  68999


Q ss_pred             EEccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           83 IHVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        83 ih~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      +|+|+.....  ......++++.|+.++.+|+++|++.+ +++|||+||.++|+  .....+++|+.+....+    .++
T Consensus        59 ~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg--~~~~~~~~E~~~~~~~~----~~~  131 (315)
T d1e6ua_          59 YLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYP--KLAKQPMAESELLQGTL----EPT  131 (315)
T ss_dssp             EECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSC--TTCCSSBCGGGTTSSCC----CGG
T ss_pred             EEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcC--CCCCCCccCCccccCCC----CCC
Confidence            9999765521  112233778999999999999999998 99999999999996  44556777775432211    244


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--chHHHH-----HH-HHhCCcccccc-ccC-CCee
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA--GSVRST-----LA-MVLGNREEYSI-LLN-ISMV  230 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~--~~~~~~-----~~-~~~~~~~~~~~-~~~-~~~i  230 (327)
                      .++|+.+|.++|++++.+++++|++++++||++||||+......  ......     .. ...+....... +.+ ++|+
T Consensus       132 ~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~  211 (315)
T d1e6ua_         132 NEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFL  211 (315)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEE
Confidence            56899999999999999999999999999999999998654322  222211     11 12233333322 233 7999


Q ss_pred             eHHHHHHHHHHhhcCCC---------CCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHHH
Q 020334          231 HIDDVARAHIFLLEYPD---------AKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKLL  300 (327)
Q Consensus       231 ~v~D~a~~~~~~~~~~~---------~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  300 (327)
                      |++|+++++..++.+..         ..+.++. .+...++.++++.+.+..+....... ...+........+|++|++
T Consensus       212 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~-~~~~~~~~~~~~~d~sk~k  290 (315)
T d1e6ua_         212 HVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVF-DASKPDGTPRKLLDVTRLH  290 (315)
T ss_dssp             EHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEE-ETTSCCCCSBCCBCCHHHH
T ss_pred             EeehhHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEE-CCCCCCCCceeccCHHHHH
Confidence            99999999999986532         2346774 67889999999999998772211110 0111122334568999998


Q ss_pred             hccccccccHHHHHHHHHHHHHHc
Q 020334          301 DICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       301 ~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                      +|||+|+++++|+|+++++||+++
T Consensus       291 ~Lg~~p~~~l~e~i~~ti~w~~~N  314 (315)
T d1e6ua_         291 QLGWYHEISLEAGLASTYQWFLEN  314 (315)
T ss_dssp             HTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred             HcCCCCCCCHHHHHHHHHHHHHHc
Confidence            899999999999999999999976

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=1.3e-42  Score=308.58  Aligned_cols=309  Identities=19%  Similarity=0.194  Sum_probs=220.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHH-CCCeEEEEEcCCCC-----C---cchh-hhhh-----CCCCCCCCeEEEeCCCCCh
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLD-HGYFVTTTVRSDPE-----H---KKDL-SFLT-----NLPGASERLQIFNADLNDP   69 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~-----~---~~~~-~~~~-----~~~~~~~~~~~~~~D~~d~   69 (327)
                      .|||||||||||||++|+++|++ .|++|+++++-...     .   .... ..+.     .......++.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            46899999999999999999986 68999999851110     0   0000 0010     0111234688999999999


Q ss_pred             hHHHHHhc---CCCEEEEccCCCCC-CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCC-----C
Q 020334           70 ESFDAAIA---GCAGVIHVAAPIDI-DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKD-----V  140 (327)
Q Consensus        70 ~~~~~~~~---~~d~vih~a~~~~~-~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~-----~  140 (327)
                      +.+.++++   ++|+|+|+|+.... .........++.|+.++.++++++++.+ +++++++||..+|+.....     .
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~  160 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNA  160 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CC
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC-Ccccccccccccccccccccccccc
Confidence            99998885   57999999997552 1222233778999999999999999998 8999999999988633222     2


Q ss_pred             CcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC-------chHHHHHHH
Q 020334          141 DMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA-------GSVRSTLAM  213 (327)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~-------~~~~~~~~~  213 (327)
                      .++.|+++         ..|.++|+.+|..+|.+++.+.+.++++++++||+++|||+......       ..++.+...
T Consensus       161 ~~~~e~~~---------~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~  231 (383)
T d1gy8a_         161 EPIDINAK---------KSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGR  231 (383)
T ss_dssp             CCBCTTSC---------CBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHH
T ss_pred             cccccccC---------CCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHH
Confidence            23444443         46788999999999999999999899999999999999998765322       122222111


Q ss_pred             H-----------------hCCcc-------ccccccC-CCeeeHHHHHHHHHHhhcCC---------CCCceEEE-eccc
Q 020334          214 V-----------------LGNRE-------EYSILLN-ISMVHIDDVARAHIFLLEYP---------DAKGRYIC-SSAK  258 (327)
Q Consensus       214 ~-----------------~~~~~-------~~~~~~~-~~~i~v~D~a~~~~~~~~~~---------~~~~~y~~-~~~~  258 (327)
                      .                 .+.+.       ..+.+.+ |+|+|++|+|++++.+++..         ...++||+ ++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~  311 (383)
T d1gy8a_         232 VMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRG  311 (383)
T ss_dssp             HHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCC
T ss_pred             HHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCc
Confidence            1                 01111       1122333 79999999999999988641         12358997 6788


Q ss_pred             cCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHH-HhccccccccHHHHHHHH-HHHHHHc
Q 020334          259 LTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL-LDICFTYKYGIDEMFDGA-IKCCKER  324 (327)
Q Consensus       259 ~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lg~~p~~~~~~~l~~~-~~~~~~~  324 (327)
                      +|+.|+++.+.+..+. ..+......+..+......|++|+ +.|||+|+++++|+|+++ +.|++.+
T Consensus       312 ~s~~el~~~i~~~~~~-~~~~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~  378 (383)
T d1gy8a_         312 YSVREVIEVARKTTGH-PIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (383)
T ss_dssp             EEHHHHHHHHHHHHCC-CCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             eeHHHHHHHHHHHhCC-CCceEECCCCCCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhC
Confidence            9999999999998772 122100111113345677899999 789999999999999887 5888876

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.8e-43  Score=313.96  Aligned_cols=316  Identities=14%  Similarity=0.155  Sum_probs=220.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcC------------CC-CC---cchhhhhhCCCCCCCCeEEEeCCCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRS------------DP-EH---KKDLSFLTNLPGASERLQIFNADLND   68 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------~~-~~---~~~~~~~~~~~~~~~~~~~~~~D~~d   68 (327)
                      +|||||||||||||++|+++|+++||+|++++.-            .. ..   ...+......  ...+++++.+|++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~Dl~d   78 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL--TGKSIELYVGDICD   78 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH--HCCCCEEEESCTTS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhh--cCCCcEEEEccCCC
Confidence            4789999999999999999999999999999720            00 00   0001101000  02578999999999


Q ss_pred             hhHHHHHhc--CCCEEEEccCCCCC----CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCC---
Q 020334           69 PESFDAAIA--GCAGVIHVAAPIDI----DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKD---  139 (327)
Q Consensus        69 ~~~~~~~~~--~~d~vih~a~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~---  139 (327)
                      .+.+.++++  ++|+|||+||....    ........+++.|+.++.+++++|++.+..+++++.||..+|+.....   
T Consensus        79 ~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~  158 (393)
T d1i24a_          79 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEE  158 (393)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCS
T ss_pred             HHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccc
Confidence            999999987  57999999986541    111222367899999999999999998855678888888777532111   


Q ss_pred             -CCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC---------------C
Q 020334          140 -VDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK---------------F  203 (327)
Q Consensus       140 -~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~---------------~  203 (327)
                       .....|+...  +.......|.++|+.+|..+|.++..++++++++++++||+++|||+....               .
T Consensus       159 ~~~~~~~~~~~--~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  236 (393)
T d1i24a_         159 GYITITHNGRT--DTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVF  236 (393)
T ss_dssp             SEEEEEETTEE--EEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTT
T ss_pred             ccccccccccc--cccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccccc
Confidence             0111111100  000111356788999999999999999999999999999999999975431               1


Q ss_pred             CchHHHHH-HHHhCCcccc-ccccC-CCeeeHHHHHHHHHHhhcCCCCCceEE---EeccccCHHHHHHHHHHhCCCCC-
Q 020334          204 AGSVRSTL-AMVLGNREEY-SILLN-ISMVHIDDVARAHIFLLEYPDAKGRYI---CSSAKLTIQEMAEFLSAKHPEYP-  276 (327)
Q Consensus       204 ~~~~~~~~-~~~~~~~~~~-~~~~~-~~~i~v~D~a~~~~~~~~~~~~~~~y~---~~~~~~s~~e~~~~i~~~~~~~~-  276 (327)
                      ...+..+. ....+.++.+ +.+.+ |||+|++|+++++..++++....+.|+   .+++.+|+.|+++.+.+..+... 
T Consensus       237 ~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~  316 (393)
T d1i24a_         237 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGL  316 (393)
T ss_dssp             CCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTC
T ss_pred             ccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCC
Confidence            12334443 3345666554 33444 899999999999999999877776543   45577999999999988644221 


Q ss_pred             -CCCCCCCcc-c-ccccccccChHHHHhccccccccHHHHHHHHHHHHHHc
Q 020334          277 -IPNVDSLSE-I-EGYKLSALSSKKLLDICFTYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       277 -~~~~~~~~~-~-~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~  324 (327)
                       ++......+ . ........|++|+++|||+|+++++++++++++|+++.
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~d~~k~~~LGw~P~~~~~~~i~~~~~~~~~~  367 (393)
T d1i24a_         317 DVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQF  367 (393)
T ss_dssp             CCCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHT
T ss_pred             CcceeeccCCCCCCCccEecCCHHHHHHcCCccccCHHHHHHHHHHHHHHH
Confidence             121000011 1 23445678999997799999999999999999998764

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=2.3e-42  Score=302.27  Aligned_cols=314  Identities=22%  Similarity=0.262  Sum_probs=223.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +|+|||||||||||++|+++|+++|++|++++| +..+...+...............+.+|+.|.+.+.+++.++|+|+|
T Consensus        11 gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~   89 (342)
T d1y1pa1          11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH   89 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred             cCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeC-CchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhh
Confidence            579999999999999999999999999999999 4433333322221111123446688999999999999999999999


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCC-C-CCcccCCCCCChhHh-------h
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGK-D-VDMLDETFWSDEDYI-------R  155 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~-~-~~~~~E~~~~~~~~~-------~  155 (327)
                      +++...... .. ...+..|+.++.+++++|++.+.+++|||+||+.+++...+ . ....+|+.+......       .
T Consensus        90 ~a~~~~~~~-~~-~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~  167 (342)
T d1y1pa1          90 IASVVSFSN-KY-DEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPES  167 (342)
T ss_dssp             CCCCCSCCS-CH-HHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTT
T ss_pred             hcccccccc-cc-cccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccccccccc
Confidence            999766442 33 37889999999999999998755899999999876442322 2 223444443322111       1


Q ss_pred             hcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCC-chHHHHHHHH-hCCcccc-ccccCCCee
Q 020334          156 KLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKFA-GSVRSTLAMV-LGNREEY-SILLNISMV  230 (327)
Q Consensus       156 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~-~~~~~~~~~~-~~~~~~~-~~~~~~~~i  230 (327)
                      ....|.++|+.+|..+|.+++.+.+++  +++++++||+.+|||...+... .....++..+ .+..... .....++|+
T Consensus       168 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v  247 (342)
T d1y1pa1         168 DPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYV  247 (342)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEE
T ss_pred             CCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceeee
Confidence            112456789999999999999998876  5788899999999997554332 2333444443 3343332 233347899


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEE-EeccccCHHHHHHHHHHhCCCCCCCCCCCCccc-ccccccccChHHHHhccccccc
Q 020334          231 HIDDVARAHIFLLEYPDAKGRYI-CSSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEI-EGYKLSALSSKKLLDICFTYKY  308 (327)
Q Consensus       231 ~v~D~a~~~~~~~~~~~~~~~y~-~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~k~~~lg~~p~~  308 (327)
                      |++|+|++++.+++++..++.|+ ++++.+|++|+++.+.+.+|...++...+.... ....+...+.++++.|||.|.+
T Consensus       248 ~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~~~~~~~~~~~~~s~~~~k~lg~~~~~  327 (342)
T d1y1pa1         248 SAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWR  327 (342)
T ss_dssp             EHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCCCCCCCEECCHHHHHHHHHTTCCSCC
T ss_pred             eHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCccCcccccccchHHHHHHHHcCCCCCc
Confidence            99999999999999887777665 678889999999999999986555541111111 1111222334445889999988


Q ss_pred             cHHHHHHHHHHHH
Q 020334          309 GIDEMFDGAIKCC  321 (327)
Q Consensus       309 ~~~~~l~~~~~~~  321 (327)
                      +++|+|+++++..
T Consensus       328 ~lee~i~d~I~s~  340 (342)
T d1y1pa1         328 SIEESIKDLVGSE  340 (342)
T ss_dssp             CHHHHHHHHHCCS
T ss_pred             CHHHHHHHHHHhC
Confidence            9999999999754

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=5.1e-41  Score=295.39  Aligned_cols=302  Identities=17%  Similarity=0.109  Sum_probs=222.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v   82 (327)
                      +|||||||||||||++|+++|+++|++|++++|+.+...........    .++++++.+|++|++.+.++++  .+|+|
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~----~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v   83 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV----ADGMQSEIGDIRDQNKLLESIREFQPEIV   83 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT----TTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc----ccCCeEEEeeccChHhhhhhhhhchhhhh
Confidence            58999999999999999999999999999999954433332222211    2579999999999999988876  67999


Q ss_pred             EEccCCCCC--CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           83 IHVAAPIDI--DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        83 ih~a~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      +|+|+....  +...+. .++.+|+.++.++++++++.+..+.+++.||..++ .......+.+|+++         ..|
T Consensus        84 ~~~aa~~~~~~~~~~~~-~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~-~~~~~~~~~~~~~~---------~~p  152 (356)
T d1rkxa_          84 FHMAAQPLVRLSYSEPV-ETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCY-DNKEWIWGYRENEA---------MGG  152 (356)
T ss_dssp             EECCSCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGB-CCCCSSSCBCTTSC---------BCC
T ss_pred             hhhhccccccccccCCc-cccccccccchhhhhhhhccccccccccccccccc-cccccccccccccc---------cCC
Confidence            999987542  223344 88999999999999999998745566666655544 34455556666654         356


Q ss_pred             chhhHhhhHHHHHHHHHHHHH---------cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc-cccccC-CCe
Q 020334          161 GKSYVLTKTLTERAALEFAEE---------HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE-YSILLN-ISM  229 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~---------~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~  229 (327)
                      .++|+.+|...|..+..+..+         .++.++++||+++|||++... ...+..+.+...+.... +....+ +++
T Consensus       153 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~  231 (356)
T d1rkxa_         153 YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL-DRIVPDILRAFEQSQPVIIRNPHAIRPW  231 (356)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS-SCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred             CCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchh-hHHHHHHHHHHhCCCceEEeeccccccc
Confidence            789999999999999887653         468899999999999986432 34555555555555433 333333 799


Q ss_pred             eeHHHHHHHHHHhhcCCCCC-----ceEEE---eccccCHHHHHHHHHHhCCC-CCCCCCCCCcccccccccccChHHH-
Q 020334          230 VHIDDVARAHIFLLEYPDAK-----GRYIC---SSAKLTIQEMAEFLSAKHPE-YPIPNVDSLSEIEGYKLSALSSKKL-  299 (327)
Q Consensus       230 i~v~D~a~~~~~~~~~~~~~-----~~y~~---~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~k~-  299 (327)
                      +|++|+++++..++.+....     ...+.   .+..+++.++++.+.+..+. ...... ......+.....+|++|+ 
T Consensus       232 ~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~d~skak  310 (356)
T d1rkxa_         232 QHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLD-GNAHPHEAHYLKLDCSKAK  310 (356)
T ss_dssp             EETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC--------CCCCCCBCCHHHH
T ss_pred             cccccccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEc-CCCCCCCcCeeeEcHHHHH
Confidence            99999999999988764322     12232   24568999999999998872 221110 111113345567899999 


Q ss_pred             HhccccccccHHHHHHHHHHHHHH
Q 020334          300 LDICFTYKYGIDEMFDGAIKCCKE  323 (327)
Q Consensus       300 ~~lg~~p~~~~~~~l~~~~~~~~~  323 (327)
                      ++|||+|+++++++|+++++||++
T Consensus       311 ~~LGw~P~~~l~egi~~ti~wyk~  334 (356)
T d1rkxa_         311 MQLGWHPRWNLNTTLEYIVGWHKN  334 (356)
T ss_dssp             HHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred             HHHCCCcCCCHHHHHHHHHHHHHH
Confidence            889999999999999999999986

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=1.1e-40  Score=290.96  Aligned_cols=309  Identities=16%  Similarity=0.130  Sum_probs=218.5

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCC-CCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEEE
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDP-EHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGVI   83 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi   83 (327)
                      ||||||||||||++|+++|+++|++|+++++-.. .....+..+..    .++++++.+|++|.+.+.++++  ++|+||
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~----~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vi   77 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS----LGNFEFVHGDIRNKNDVTRLITKYMPDSCF   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc----cCCcEEEEcccCCHHHHHHHHHhcCCceEE
Confidence            7999999999999999999999999999986222 22223333333    2688999999999999999987  469999


Q ss_pred             EccCCCCCC--CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCC-------ChhHh
Q 020334           84 HVAAPIDID--GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWS-------DEDYI  154 (327)
Q Consensus        84 h~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~-------~~~~~  154 (327)
                      |+|+.....  ..++. ..+++|+.|+.+|++++++.+ ++++++.||+.+++.. ....+..+.+..       .....
T Consensus        78 h~aa~~~~~~~~~~~~-~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  154 (338)
T d1orra_          78 HLAGQVAMTTSIDNPC-MDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGD-LEQYKYNETETRYTCVDKPNGYDE  154 (338)
T ss_dssp             ECCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTT-CTTSCEEECSSCEEETTCTTCBCT
T ss_pred             eecccccccccccChH-HHHHHHHHHHHHHHHhhhccc-cccccccccccccccc-ccccccccccccccccccccCccc
Confidence            999976532  22334 889999999999999999998 6666666666555422 222221111100       00000


Q ss_pred             hhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC-chHHHHHHH----Hh--CCcccccccc-C
Q 020334          155 RKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFA-GSVRSTLAM----VL--GNREEYSILL-N  226 (327)
Q Consensus       155 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~-~~~~~~~~~----~~--~~~~~~~~~~-~  226 (327)
                      .....|.+.|+.+|...|.++..+.+.++....++|++++|++....... ..+..+...    ..  +.+..+...+ +
T Consensus       155 ~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  234 (338)
T d1orra_         155 STQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQ  234 (338)
T ss_dssp             TSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCC
T ss_pred             CCccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCce
Confidence            11124678999999999999999999899999999999999886544332 233333222    22  2333333223 3


Q ss_pred             -CCeeeHHHHHHHHHHhhcCCC--CCceEEEe---ccccCHHHHHHHHHHhCCCCCCCCCCCCcccccccccccChHHH-
Q 020334          227 -ISMVHIDDVARAHIFLLEYPD--AKGRYICS---SAKLTIQEMAEFLSAKHPEYPIPNVDSLSEIEGYKLSALSSKKL-  299 (327)
Q Consensus       227 -~~~i~v~D~a~~~~~~~~~~~--~~~~y~~~---~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-  299 (327)
                       ++|+|++|++++++.++++..  .+++|++.   +..+++.|+++.+.+..+. ..+......+..+...+..|++|+ 
T Consensus       235 ~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~d~~k~~  313 (338)
T d1orra_         235 VRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNI-DMRFTNLPVRESDQRVFVADIKKIT  313 (338)
T ss_dssp             EEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTC-CCCEEEECCCSSCCSEECBCCHHHH
T ss_pred             eEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCC-CceeEeCCCCCCCcCeeeECHHHHH
Confidence             799999999999999997743  45678762   4568999999999998772 112100111112344567799999 


Q ss_pred             HhccccccccHHHHHHHHHHHHHH
Q 020334          300 LDICFTYKYGIDEMFDGAIKCCKE  323 (327)
Q Consensus       300 ~~lg~~p~~~~~~~l~~~~~~~~~  323 (327)
                      +.|||+|+++++|+|+++++|+|.
T Consensus       314 ~~Lg~~p~~sl~e~i~~ti~W~k~  337 (338)
T d1orra_         314 NAIDWSPKVSAKDGVQKMYDWTSS  337 (338)
T ss_dssp             HHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             HHHCCCcCCCHHHHHHHHHHHHHc
Confidence            789999999999999999999985

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=3e-38  Score=268.53  Aligned_cols=268  Identities=15%  Similarity=0.062  Sum_probs=207.0

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi   83 (327)
                      |||||||||||||++|+++|.++||+|++++|+.                        .|++|.+.+.++++  ++|+||
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~------------------------~D~~d~~~~~~~l~~~~~d~vi   57 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD------------------------LDITNVLAVNKFFNEKKPNVVI   57 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT------------------------CCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh------------------------ccCCCHHHHHHHHHHcCCCEEE
Confidence            6799999999999999999999999999998821                        68999999999887  689999


Q ss_pred             EccCCCCC-CCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           84 HVAAPIDI-DGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        84 h~a~~~~~-~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      |+|+.... ............|+.....+.+.++...  ..+++.||..+|+  .....+.+|.++         ..|.+
T Consensus        58 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~ss~~v~~--~~~~~~~~e~~~---------~~~~~  124 (281)
T d1vl0a_          58 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG--AEIVQISTDYVFD--GEAKEPITEFDE---------VNPQS  124 (281)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGSC--SCCSSCBCTTSC---------CCCCS
T ss_pred             eeccccccccccccchhhccccccccccccccccccc--ccccccccceeee--cccccccccccc---------ccchh
Confidence            99987652 1122223778889999999999998876  6888999988885  555677788875         35677


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHH-hCCccccccccCCCeeeHHHHHHHHHH
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-LGNREEYSILLNISMVHIDDVARAHIF  241 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~~~~~  241 (327)
                      .|+.+|...|.+++.    .+.+.+++||+++|||+.+     ....+.... .+..........++++|++|+++++..
T Consensus       125 ~~~~~k~~~e~~~~~----~~~~~~i~R~~~vyG~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~  195 (281)
T d1vl0a_         125 AYGKTKLEGENFVKA----LNPKYYIVRTAWLYGDGNN-----FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLK  195 (281)
T ss_dssp             HHHHHHHHHHHHHHH----HCSSEEEEEECSEESSSSC-----HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHH
T ss_pred             hhhhhhhHHHHHHHH----hCCCccccceeEEeCCCcc-----cccchhhhhccCCceeecCCceeccchhhhhhhhhhh
Confidence            899999999988753    5789999999999999743     333344333 333333333334899999999999999


Q ss_pred             hhcCCCCCceEE-EeccccCHHHHHHHHHHhCCC-CC---CCCCCCCccc-ccccccccChHHH-HhccccccccHHHHH
Q 020334          242 LLEYPDAKGRYI-CSSAKLTIQEMAEFLSAKHPE-YP---IPNVDSLSEI-EGYKLSALSSKKL-LDICFTYKYGIDEMF  314 (327)
Q Consensus       242 ~~~~~~~~~~y~-~~~~~~s~~e~~~~i~~~~~~-~~---~~~~~~~~~~-~~~~~~~~d~~k~-~~lg~~p~~~~~~~l  314 (327)
                      ++++.. .|.|| ++++.+|+.|+++.+++.++. ..   ++. ..+... .++.+..+|++|+ +.+||+|+ +|+|+|
T Consensus       196 ~~~~~~-~g~~~~~~~~~~s~~e~~~~i~~~~g~~~~i~~i~~-~~~~~~a~rp~~~~ld~~k~~~~~g~~~~-~~~~~l  272 (281)
T d1vl0a_         196 VIDEKN-YGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTT-EEFPRPAKRPKYSVLRNYMLELTTGDITR-EWKESL  272 (281)
T ss_dssp             HHHHTC-CEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECS-TTSCCSSCCCSBCCBCCHHHHHTTCCCCC-BHHHHH
T ss_pred             hhhhcc-cCceeEeCCCccchHHHHHHHHHHhCCCceEEeccH-HHcCCcCCCccccccCHHHHHHHhCCCCC-CHHHHH
Confidence            998865 46887 567889999999999998872 21   111 111111 2233456899999 78999999 999999


Q ss_pred             HHHHHHHH
Q 020334          315 DGAIKCCK  322 (327)
Q Consensus       315 ~~~~~~~~  322 (327)
                      +++++++|
T Consensus       273 ~~~l~~l~  280 (281)
T d1vl0a_         273 KEYIDLLQ  280 (281)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHhc
Confidence            99999986

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8e-37  Score=262.65  Aligned_cols=288  Identities=19%  Similarity=0.178  Sum_probs=192.2

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHH-HHh-----cCCC
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFD-AAI-----AGCA   80 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~-~~~-----~~~d   80 (327)
                      |||||||||||++|+++|+++|+ +|+++++ -... .....+...         ...|..+.+.+. ...     ..++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~-~~~~-~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN-LKDG-TKFVNLVDL---------NIADYMDKEDFLIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEEC-CSSG-GGGHHHHTS---------CCSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEEC-CCCc-chhhccccc---------chhhhccchHHHHHHhhhhcccchh
Confidence            89999999999999999999995 7998875 2221 111111111         112333333332 222     3578


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      +|+|+|+.......... .....|+.++.+++++++..+ + ++++.||..+++  ........|+.+         ..|
T Consensus        71 ~i~~~aa~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~-i-~~v~~ss~~~~~--~~~~~~~~~~~~---------~~~  136 (307)
T d1eq2a_          71 AIFHEGACSSTTEWDGK-YMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYG--GRTSDFIESREY---------EKP  136 (307)
T ss_dssp             EEEECCSCCCTTCCCHH-HHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGT--TCCSCBCSSGGG---------CCC
T ss_pred             hhhhhcccccccccccc-ccccccccccccccccccccc-c-cccccccccccc--cccccccccccc---------ccc
Confidence            99999986655544444 788899999999999999987 5 577777777774  223333333332         366


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC--CCchHHHHHHHHhCCc-cccccc-c-C-CCeeeHHH
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPK--FAGSVRSTLAMVLGNR-EEYSIL-L-N-ISMVHIDD  234 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~-~-~-~~~i~v~D  234 (327)
                      .+.|+.+|..+|.+++.++++++++++++||+++|||+....  ....+..+...+..+. .....+ + . ++|+|++|
T Consensus       137 ~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d  216 (307)
T d1eq2a_         137 LNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD  216 (307)
T ss_dssp             SSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred             ccccccccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeeccc
Confidence            788999999999999999998999999999999999976532  2233444444444433 322222 2 2 79999999


Q ss_pred             HHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHHhCCCCCCCCCCCCccc--ccccccccChHHH-HhccccccccH
Q 020334          235 VARAHIFLLEYPDAKGRYIC-SSAKLTIQEMAEFLSAKHPEYPIPNVDSLSEI--EGYKLSALSSKKL-LDICFTYKYGI  310 (327)
Q Consensus       235 ~a~~~~~~~~~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~k~-~~lg~~p~~~~  310 (327)
                      +++++..++++. ..+.||+ +++..|++|+++.+.+..+...++........  ........|++|+ +.+||+|++++
T Consensus       217 ~~~~~~~~~~~~-~~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~~k~~~~~~~~p~~sl  295 (307)
T d1eq2a_         217 VADVNLWFLENG-VSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTV  295 (307)
T ss_dssp             HHHHHHHHHHHC-CCEEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHHTTCCCCCCCH
T ss_pred             HHHHHHHHhhhc-cccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccCCCCCceeeecCHHHHHHHHCCCCCCCH
Confidence            999999999875 4568875 68899999999999876653332221011111  2233345699999 88899999999


Q ss_pred             HHHHHHHHHHH
Q 020334          311 DEMFDGAIKCC  321 (327)
Q Consensus       311 ~~~l~~~~~~~  321 (327)
                      +|+|+++++|+
T Consensus       296 ~egi~~~i~w~  306 (307)
T d1eq2a_         296 AEGVTEYMAWL  306 (307)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHHhC
Confidence            99999999986

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=100.00  E-value=7.8e-34  Score=242.90  Aligned_cols=275  Identities=14%  Similarity=0.056  Sum_probs=197.2

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi   83 (327)
                      |||||||||||||++|+++|.++|+. ++++++..                    .+.+|++|.+.+.++++  ++|+||
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~-v~~~~~~~--------------------~~~~Dl~~~~~~~~~i~~~~~D~Vi   59 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNL-IALDVHSK--------------------EFCGDFSNPKGVAETVRKLRPDVIV   59 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEE-EEECTTCS--------------------SSCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCE-EEEECCCc--------------------cccCcCCCHHHHHHHHHHcCCCEEE
Confidence            57999999999999999999999864 44555221                    12389999999999886  679999


Q ss_pred             EccCCCC--CCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           84 HVAAPID--IDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        84 h~a~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      ||||...  .....+. ..++.|+.++.+|++++++.+  .+++++||+.+|+  .....+++|+++         ..|.
T Consensus        60 h~Aa~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~--~~~~~~ss~~~~~--~~~~~~~~E~~~---------~~p~  125 (298)
T d1n2sa_          60 NAAAHTAVDKAESEPE-LAQLLNATSVEAIAKAANETG--AWVVHYSTDYVFP--GTGDIPWQETDA---------TSPL  125 (298)
T ss_dssp             ECCCCCCHHHHTTCHH-HHHHHHTHHHHHHHHHHTTTT--CEEEEEEEGGGSC--CCTTCCBCTTSC---------CCCS
T ss_pred             EecccccccccccCcc-ccccccccccccchhhhhccc--ccccccccccccc--CCCCCCCccccc---------cCCC
Confidence            9999765  2233444 789999999999999999887  6799999998885  456678888876         3567


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc-cccccccCCCeeeHHHHHHHHH
Q 020334          162 KSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR-EEYSILLNISMVHIDDVARAHI  240 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~D~a~~~~  240 (327)
                      +.|+.+|..+|..+..+    .....++|++..|+....    .....+........ ........++++|++|+++++.
T Consensus       126 ~~y~~~k~~~e~~~~~~----~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  197 (298)
T d1n2sa_         126 NVYGKTKLAGEKALQDN----CPKHLIFRTSWVYAGKGN----NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTA  197 (298)
T ss_dssp             SHHHHHHHHHHHHHHHH----CSSEEEEEECSEECSSSC----CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHH
T ss_pred             chHhhhhhhhhhhHHhh----hcccccccccceeeccCC----ccchhhhhhhcccceeecccceeecccccchHHHHHH
Confidence            89999999999988654    344566776666654322    22223333333333 3333222378999999999988


Q ss_pred             Hhhc----CCCCCceEEE-eccccCHHHHHHHHHHhCCC--CCCCCC-------CCCc-ccccccccccChHHH-Hhccc
Q 020334          241 FLLE----YPDAKGRYIC-SSAKLTIQEMAEFLSAKHPE--YPIPNV-------DSLS-EIEGYKLSALSSKKL-LDICF  304 (327)
Q Consensus       241 ~~~~----~~~~~~~y~~-~~~~~s~~e~~~~i~~~~~~--~~~~~~-------~~~~-~~~~~~~~~~d~~k~-~~lg~  304 (327)
                      .++.    .....++||+ +++.++..|+++.+.+..+.  ...+..       ..+. ....+.+..+|++|+ +.+||
T Consensus       198 ~~i~~~~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~ld~~K~~~~~~~  277 (298)
T d1n2sa_         198 HAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDL  277 (298)
T ss_dssp             HHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTC
T ss_pred             HHHhhhhccccccccccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCCCccccccCHHHHHHHHCC
Confidence            8775    3445679996 55789999999988774431  111110       0010 011223457899999 77999


Q ss_pred             cccccHHHHHHHHHHHHHHc
Q 020334          305 TYKYGIDEMFDGAIKCCKER  324 (327)
Q Consensus       305 ~p~~~~~~~l~~~~~~~~~~  324 (327)
                      +|+ +|+++|+++++.+.+.
T Consensus       278 ~~~-~~~~gl~~~i~~~~~~  296 (298)
T d1n2sa_         278 ILP-QWELGVKRMLTEMFTT  296 (298)
T ss_dssp             CCC-BHHHHHHHHHHHHHSC
T ss_pred             CCC-cHHHHHHHHHHHHHhh
Confidence            999 9999999999988764

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-31  Score=220.02  Aligned_cols=207  Identities=15%  Similarity=0.097  Sum_probs=156.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      +++|||||||||||++|+++|+++|+  +|++++|+........         ...+....+|+.+.+.+.+.++++|+|
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~---------~~~i~~~~~D~~~~~~~~~~~~~~d~v   84 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA---------YKNVNQEVVDFEKLDDYASAFQGHDVG   84 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG---------GGGCEEEECCGGGGGGGGGGGSSCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc---------cceeeeeeecccccccccccccccccc
Confidence            57899999999999999999999984  8999999433222111         146788889999999999999999999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      +||++....  .....++.++|+.++.+++++|++.+ +++|||+||..++.                        .+.+
T Consensus        85 i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~~~------------------------~~~~  137 (232)
T d2bkaa1          85 FCCLGTTRG--KAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADK------------------------SSNF  137 (232)
T ss_dssp             EECCCCCHH--HHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT------------------------TCSS
T ss_pred             ccccccccc--ccchhhhhhhcccccceeeecccccC-ccccccCCcccccc------------------------Cccc
Confidence            999986431  12334778999999999999999988 99999999987652                        2345


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCC-cEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHH
Q 020334          163 SYVLTKTLTERAALEFAEEHGL-DLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIF  241 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~-~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  241 (327)
                      .|+.+|..+|+.+..    .++ +++|+||+.+||++...   .....+........  .........||++|+|++++.
T Consensus       138 ~Y~~~K~~~E~~l~~----~~~~~~~IlRP~~i~G~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~I~~~dvA~a~i~  208 (232)
T d2bkaa1         138 LYLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQES---RPGEWLVRKFFGSL--PDSWASGHSVPVVTVVRAMLN  208 (232)
T ss_dssp             HHHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGG---SHHHHHHHHHHCSC--CTTGGGGTEEEHHHHHHHHHH
T ss_pred             hhHHHHHHhhhcccc----ccccceEEecCceeecCCCcC---cHHHHHHHHHhhcc--CCcccCCCeEEHHHHHHHHHH
Confidence            799999999998754    466 48999999999996543   22222222221111  111112368999999999999


Q ss_pred             hhcCCCCCceEEEec
Q 020334          242 LLEYPDAKGRYICSS  256 (327)
Q Consensus       242 ~~~~~~~~~~y~~~~  256 (327)
                      ++.++..++.+++++
T Consensus       209 ~~~~~~~~~~~i~~~  223 (232)
T d2bkaa1         209 NVVRPRDKQMELLEN  223 (232)
T ss_dssp             HHTSCCCSSEEEEEH
T ss_pred             HHhcCccCCeEEEcH
Confidence            998888888887764

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.9e-29  Score=203.61  Aligned_cols=202  Identities=17%  Similarity=0.175  Sum_probs=151.1

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      |+  |+||+||||||+||++++++|+++||+|++++| ++.+.....        ..+++++.+|+.|.+++.++++++|
T Consensus         1 m~--~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R-~~~~~~~~~--------~~~~~~~~gD~~d~~~l~~al~~~d   69 (205)
T d1hdoa_           1 MA--VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR-DSSRLPSEG--------PRPAHVVVGDVLQAADVDKTVAGQD   69 (205)
T ss_dssp             CC--CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CGGGSCSSS--------CCCSEEEESCTTSHHHHHHHHTTCS
T ss_pred             CC--CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEc-Chhhccccc--------ccccccccccccchhhHHHHhcCCC
Confidence            66  789999999999999999999999999999999 443322111        2578999999999999999999999


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCC
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIW  160 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~  160 (327)
                      +|||++|......  +    ...+..++.++++++++++ +++||++||..+++..  ..      .          ...
T Consensus        70 ~vi~~~g~~~~~~--~----~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~--~~------~----------~~~  124 (205)
T d1hdoa_          70 AVIVLLGTRNDLS--P----TTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDP--TK------V----------PPR  124 (205)
T ss_dssp             EEEECCCCTTCCS--C----CCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCT--TC------S----------CGG
T ss_pred             EEEEEeccCCchh--h----hhhhHHHHHHHHHHHHhcC-CCeEEEEeeeeccCCC--cc------c----------ccc
Confidence            9999998643221  1    2345678999999999998 9999999998876411  11      1          122


Q ss_pred             chhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHH
Q 020334          161 GKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI  240 (327)
Q Consensus       161 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  240 (327)
                      ...|...|..+|++++    +.+++++++||+.+++.......              ...........+++++|+|++++
T Consensus       125 ~~~~~~~~~~~e~~l~----~~~~~~tiirp~~~~~~~~~~~~--------------~~~~~~~~~~~~i~~~DvA~~~~  186 (205)
T d1hdoa_         125 LQAVTDDHIRMHKVLR----ESGLKYVAVMPPHIGDQPLTGAY--------------TVTLDGRGPSRVISKHDLGHFML  186 (205)
T ss_dssp             GHHHHHHHHHHHHHHH----HTCSEEEEECCSEEECCCCCSCC--------------EEESSSCSSCSEEEHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHH----hcCCceEEEecceecCCCCcccE--------------EEeeCCCCCCCcCCHHHHHHHHH
Confidence            3468888998888764    47999999999999875332210              01111112357999999999999


Q ss_pred             HhhcCCCCCc-eEEEec
Q 020334          241 FLLEYPDAKG-RYICSS  256 (327)
Q Consensus       241 ~~~~~~~~~~-~y~~~~  256 (327)
                      .++++++..| .+.++.
T Consensus       187 ~~l~~~~~~g~~~~~s~  203 (205)
T d1hdoa_         187 RCLTTDEYDGHSTYPSH  203 (205)
T ss_dssp             HTTSCSTTTTCEEEEEC
T ss_pred             HHhCCCCCCCEEEecCC
Confidence            9999877534 455543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=2.9e-28  Score=197.79  Aligned_cols=194  Identities=18%  Similarity=0.159  Sum_probs=136.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHh-cCCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAI-AGCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~d~   81 (327)
                      +|||||||||||||++++++|+++|+  +|+++.|+....             .+.+.   .+..|..++...+ ..+|+
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-------------~~~~~---~~~~d~~~~~~~~~~~~d~   65 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-------------HPRLD---NPVGPLAELLPQLDGSIDT   65 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-------------CTTEE---CCBSCHHHHGGGCCSCCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-------------ccccc---ccccchhhhhhccccchhe
Confidence            58999999999999999999999997  677777732211             12333   3444544444333 36899


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCc
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWG  161 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  161 (327)
                      ||||+|......... ..+...|+.++.+++++|++.+ +++|+++||..++.                        .+.
T Consensus        66 vi~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~~~------------------------~~~  119 (212)
T d2a35a1          66 AFCCLGTTIKEAGSE-EAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADA------------------------KSS  119 (212)
T ss_dssp             EEECCCCCHHHHSSH-HHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT------------------------TCS
T ss_pred             eeeeeeeeccccccc-cccccchhhhhhhccccccccc-cccccccccccccc------------------------ccc
Confidence            999998653222233 3889999999999999999988 99999999987762                        234


Q ss_pred             hhhHhhhHHHHHHHHHHHHHcCC-cEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHH
Q 020334          162 KSYVLTKTLTERAALEFAEEHGL-DLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHI  240 (327)
Q Consensus       162 ~~Y~~sK~~~e~~~~~~~~~~~~-~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  240 (327)
                      +.|+.+|..+|+.++.    .++ +++|+||+.+|||.........+        .........+.+..||++|+|++++
T Consensus       120 ~~y~~~K~~~E~~l~~----~~~~~~~I~Rp~~v~G~~~~~~~~~~~--------~~~~~~~~~~~~~~i~v~DvA~ai~  187 (212)
T d2a35a1         120 IFYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFRLAEIL--------AAPIARILPGKYHGIEACDLARALW  187 (212)
T ss_dssp             SHHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEEGGGGT--------TCCCC----CHHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHhhhccc----cccccceeeCCcceeCCcccccHHHHH--------HHHHhhccCCCCcEEEHHHHHHHHH
Confidence            6799999999998753    455 59999999999997543211111        1111111112246799999999999


Q ss_pred             HhhcCCCCCceE
Q 020334          241 FLLEYPDAKGRY  252 (327)
Q Consensus       241 ~~~~~~~~~~~y  252 (327)
                      .+++++..+..|
T Consensus       188 ~~~~~~~~g~~~  199 (212)
T d2a35a1         188 RLALEEGKGVRF  199 (212)
T ss_dssp             HHHTCCCSEEEE
T ss_pred             HHHcCCCCCCEE
Confidence            999887654333

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=5.7e-27  Score=194.20  Aligned_cols=227  Identities=17%  Similarity=0.196  Sum_probs=156.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCe--EEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYF--VTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      .|++|||||||||||++++++|+++|++  |+.+.| ++....   .+      ..+++++.+|+.+.+.+.++++++|+
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R-~~~~~~---~~------~~~~~~~~~d~~~~~~~~~~~~~~d~   71 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR-SAQGKE---KI------GGEADVFIGDITDADSINPAFQGIDA   71 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEES-CHHHHH---HT------TCCTTEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcC-CHHHHH---hc------cCCcEEEEeeecccccccccccccee
Confidence            3789999999999999999999999975  566677 432222   11      25789999999999999999999999


Q ss_pred             EEEccCCCCCC---------------CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           82 VIHVAAPIDID---------------GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        82 vih~a~~~~~~---------------~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                      |||+|+.....               ..... ....+|+.++.+++..+.... .+.+.+.|+...+..  .  .+..  
T Consensus        72 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~--~--~~~~--  143 (252)
T d2q46a1          72 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQ-YPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNP--D--HPLN--  143 (252)
T ss_dssp             EEECCCCCCEECTTCCTTSCCCCCEECCTTC-SHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCT--T--CGGG--
T ss_pred             eEEEEeeccccccccchhhhhhcccccccch-hhhccccccceeecccccccc-ccccccccccccCCC--C--cccc--
Confidence            99999754310               11222 567889999999999999887 788888887654420  0  0000  


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                                 ..+...|...+    .....+..+.+++++++||+++|||.....  ..+       .+.. .......
T Consensus       144 -----------~~~~~~~~~~~----~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~--~~~-------~~~~-~~~~~~~  198 (252)
T d2q46a1         144 -----------KLGNGNILVWK----RKAEQYLADSGTPYTIIRAGGLLDKEGGVR--ELL-------VGKD-DELLQTD  198 (252)
T ss_dssp             -----------GGGGCCHHHHH----HHHHHHHHHSSSCEEEEEECEEECSCTTSS--CEE-------EEST-TGGGGSS
T ss_pred             -----------cccccchhhhh----hhhhhhhhcccccceeecceEEECCCcchh--hhh-------hccC-cccccCC
Confidence                       01122233333    333444566799999999999999974421  110       0111 1111223


Q ss_pred             CCeeeHHHHHHHHHHhhcCCCCC-ceEEEec----cccCHHHHHHHHHHhCC
Q 020334          227 ISMVHIDDVARAHIFLLEYPDAK-GRYICSS----AKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~~~~-~~y~~~~----~~~s~~e~~~~i~~~~~  273 (327)
                      .+++|++|+|++++.+++++... ++||+++    ...+++|+.+++.+...
T Consensus       199 ~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         199 TKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             CCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             CCeEEHHHHHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            58999999999999999987654 4898643    24678888887765443

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.95  E-value=2.2e-28  Score=209.98  Aligned_cols=233  Identities=15%  Similarity=0.115  Sum_probs=159.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      .++||||||||||||++|+++|+++|++|++++|+..... .....+....  ..+++++.+|+.|.+.+.+.+.+++++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~~~~~~~   79 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALKQVDVV   79 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHTTCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhhccCcchh
Confidence            3678999999999999999999999999999999433221 1111111110  257899999999999999999999999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      +|+++.....          .|..+..++++++++.+ ..++++.||.+++.  .      .+..+         ..+..
T Consensus        80 ~~~~~~~~~~----------~~~~~~~~~l~~a~~~~-~~~~v~~Ss~g~~~--~------~~~~~---------~~~~~  131 (312)
T d1qyda_          80 ISALAGGVLS----------HHILEQLKLVEAIKEAG-NIKRFLPSEFGMDP--D------IMEHA---------LQPGS  131 (312)
T ss_dssp             EECCCCSSSS----------TTTTTHHHHHHHHHHSC-CCSEEECSCCSSCT--T------SCCCC---------CSSTT
T ss_pred             hhhhhhcccc----------cchhhhhHHHHHHHHhc-CCcEEEEeeccccC--C------Ccccc---------cchhh
Confidence            9999754321          23445678888888887 67788888755432  0      11111         12334


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc-ccccC-CCeeeHHHHHHHHH
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY-SILLN-ISMVHIDDVARAHI  240 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~i~v~D~a~~~~  240 (327)
                      .|...|..++    .+.+..+++++++||+.+||+............   ........+ ..+.. ++|+|++|+|++++
T Consensus       132 ~~~~~~~~~~----~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  204 (312)
T d1qyda_         132 ITFIDKRKVR----RAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHM---MPPRDKVLIYGDGNVKGIWVDEDDVGTYTI  204 (312)
T ss_dssp             HHHHHHHHHH----HHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCS---SCCSSEECCBTTSCSEEEEECHHHHHHHHH
T ss_pred             hhhHHHHHHH----HhhcccccceEEeccceeecCCccchhhHHHHh---hhcccccccccccccccceeeHHHHHHHHH
Confidence            4555555544    455667999999999999998654321111100   011223222 22223 79999999999999


Q ss_pred             HhhcCCCC-Cce-EEEe-ccccCHHHHHHHHHHhCC
Q 020334          241 FLLEYPDA-KGR-YICS-SAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       241 ~~~~~~~~-~~~-y~~~-~~~~s~~e~~~~i~~~~~  273 (327)
                      .++.++.. ++. |+++ ++.+|++|+++.+++.++
T Consensus       205 ~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g  240 (312)
T d1qyda_         205 KSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSE  240 (312)
T ss_dssp             HHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred             HHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHC
Confidence            99988764 344 5554 567999999999999876

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.94  E-value=6.4e-27  Score=199.95  Aligned_cols=226  Identities=18%  Similarity=0.231  Sum_probs=156.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc--hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK--DLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      +|||||||||||||++++++|+++|++|++++|+......  ....+....  ..+++++.+|+.+...+.+.+.+++.|
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~v   80 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVKNVDVV   80 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc--cCCcEEEEeecccchhhhhhhhhceee
Confidence            6899999999999999999999999999999994332211  111111110  246899999999999999999999999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      +|+++...              ..++.+++++++..+ .+++++.||.....         ++...         ..+..
T Consensus        81 i~~~~~~~--------------~~~~~~~~~a~~~~~-~~~~~~~s~~~~~~---------~~~~~---------~~~~~  127 (307)
T d1qyca_          81 ISTVGSLQ--------------IESQVNIIKAIKEVG-TVKRFFPSEFGNDV---------DNVHA---------VEPAK  127 (307)
T ss_dssp             EECCCGGG--------------SGGGHHHHHHHHHHC-CCSEEECSCCSSCT---------TSCCC---------CTTHH
T ss_pred             eecccccc--------------cchhhHHHHHHHHhc-cccceeeecccccc---------ccccc---------ccccc
Confidence            99987432              334567778888887 78888888754321         11111         12223


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc-cccC-CCeeeHHHHHHHHH
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS-ILLN-ISMVHIDDVARAHI  240 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~i~v~D~a~~~~  240 (327)
                      .+...+...+..    .++.+++++++||+.+||+...... ...   .....+....+. .+.+ ++|+|++|+|++++
T Consensus       128 ~~~~~~~~~~~~----~~~~~~~~~i~r~~~v~g~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  199 (307)
T d1qyca_         128 SVFEVKAKVRRA----IEAEGIPYTYVSSNCFAGYFLRSLA-QAG---LTAPPRDKVVILGDGNARVVFVKEEDIGTFTI  199 (307)
T ss_dssp             HHHHHHHHHHHH----HHHHTCCBEEEECCEEHHHHTTTTT-CTT---CSSCCSSEEEEETTSCCEEEEECHHHHHHHHH
T ss_pred             ccccccccccch----hhccCCCceecccceecCCCccchh-hhh---hhhhhcccceeeecccccccCCcHHHHHHHHH
Confidence            355555554444    4557899999999999998654311 111   111122222222 2223 89999999999999


Q ss_pred             HhhcCCCC-Cc-eEEE-eccccCHHHHHHHHHHhCC
Q 020334          241 FLLEYPDA-KG-RYIC-SSAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       241 ~~~~~~~~-~~-~y~~-~~~~~s~~e~~~~i~~~~~  273 (327)
                      .+++++.. ++ +|++ +++.+|+.|+++.+.+.+|
T Consensus       200 ~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G  235 (307)
T d1qyca_         200 KAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID  235 (307)
T ss_dssp             TTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTT
T ss_pred             HHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHC
Confidence            99988654 34 4564 5678999999999999988

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=3.2e-22  Score=164.33  Aligned_cols=214  Identities=18%  Similarity=0.180  Sum_probs=152.6

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |.+.+|++|||||++.||.++++.|+++|++|++.+| +.+   .++...+.    -+++++.+|++|+++++++++   
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r-~~~---~l~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~   72 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDI-EEG---PLREAAEA----VGAHPVVMDVADPASVERGFAEAL   72 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHH---HHHHHHHT----TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHH---HHHHHHHH----cCCeEEEEecCCHHHHHHHHHHHH
Confidence            7777899999999999999999999999999999999 432   23322221    357889999999998887664   


Q ss_pred             ----CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCccc
Q 020334           78 ----GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 ----~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                          ++|++|||||...      .+.+++. +.+++|+.++..+.+++.+.   .....++++||....+          
T Consensus        73 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~-~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~----------  141 (242)
T d1ulsa_          73 AHLGRLDGVVHYAGITRDNFHWKMPLEDWE-LVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG----------  141 (242)
T ss_dssp             HHHSSCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC----------
T ss_pred             HhcCCceEEEECCcccccCchhhCcchhhh-ccccccchhhhhhhhhccccccccccceeeeeccccccC----------
Confidence                5899999998654      2233454 88999999988888766543   1255777777754221          


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.|..... +...   ...... ..++
T Consensus       142 -------------~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~-~~~~---~~~~~~-~~pl  203 (242)
T d1ulsa_         142 -------------NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV-PEKV---REKAIA-ATPL  203 (242)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS-CHHH---HHHHHH-TCTT
T ss_pred             -------------CCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC-CHHH---HHHHHh-cCCC
Confidence                         1235679999999999999888765   79999999999988754322 2211   111111 1122


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSS  256 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~  256 (327)
                      .     .+..++|+|+++++++....  ..| .+.+.|
T Consensus       204 ~-----R~~~pedia~~v~fL~S~~s~~itG~~i~vDG  236 (242)
T d1ulsa_         204 G-----RAGKPLEVAYAALFLLSDESSFITGQVLFVDG  236 (242)
T ss_dssp             C-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             C-----CCCCHHHHHHHHHHHhchhhCCCCCcEEEECC
Confidence            2     57789999999999996533  234 445544

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=6.3e-23  Score=169.91  Aligned_cols=221  Identities=13%  Similarity=0.097  Sum_probs=156.0

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |.+.+|++|||||++.||.+++++|+++|++|++.+| +.+.... ..++...   ..++.++.+|++|+++++++++  
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~~~~~~~~l~~~---g~~~~~~~~Dvs~~~~~~~~~~~~   82 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDI-NADAANHVVDEIQQL---GGQAFACRCDITSEQELSALADFA   82 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEES-CHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHHc---CCcEEEEEccCCCHHHHHHHHHHH
Confidence            3445789999999999999999999999999999999 4333222 2333322   3578899999999998877654  


Q ss_pred             -----CCCEEEEccCCCCC-----CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 -----GCAGVIHVAAPIDI-----DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                           ++|++||+||....     +.+++. ..+++|+.++..+.+.+.    +.+ ..++|++||......        
T Consensus        83 ~~~~g~iDilvnnAG~~~~~~~e~~~e~~~-~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~--------  152 (255)
T d1fmca_          83 ISKLGKVDILVNNAGGGGPKPFDMPMADFR-RAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENK--------  152 (255)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCC--------
T ss_pred             HHHcCCCCEeeeCCcCCCCCcccCCHHHHH-HHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhcc--------
Confidence                 68999999986542     233454 889999999887776554    334 468999999765421        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.|..........   ...... ..+
T Consensus       153 --------------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~---~~~~~~-~~p  214 (255)
T d1fmca_         153 --------------NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEI---EQKMLQ-HTP  214 (255)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHH---HHHHHH-TCS
T ss_pred             --------------ccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHH---HHHHHh-cCC
Confidence                          1235679999999999999888764   8999999999997764322222111   111111 122


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSAK  258 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~~  258 (327)
                      +.     .+..++|+|+++++++....  ..| .+.+.|..
T Consensus       215 l~-----R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         215 IR-----RLGQPQDIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             SC-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CC-----CCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence            22     57789999999999996543  234 55676654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.90  E-value=1e-23  Score=183.82  Aligned_cols=226  Identities=15%  Similarity=0.051  Sum_probs=155.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhH-HHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPES-FDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~~~d~v   82 (327)
                      .+|+|||||||||||++++++|+++||+|+++.| ++..... ..+..    ..+++.+.+|+.|..+ +..++.++|.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~~~~-~~~~~----~~~v~~~~gD~~d~~~~~~~a~~~~~~~   75 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH-SLKGLIA-EELQA----IPNVTLFQGPLLNNVPLMDTLFEGAHLA   75 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEES-CSCSHHH-HHHHT----STTEEEEESCCTTCHHHHHHHHTTCSEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEEC-Ccchhhh-hhhcc----cCCCEEEEeeCCCcHHHHHHHhcCCceE
Confidence            4789999999999999999999999999999999 5443322 22222    2589999999998654 67788889998


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCch
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGK  162 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  162 (327)
                      ++......           ..|+..+.++++++++.+ ++++++.||.....  .. .                 ..+..
T Consensus        76 ~~~~~~~~-----------~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~~~~--~~-~-----------------~~~~~  123 (350)
T d1xgka_          76 FINTTSQA-----------GDEIAIGKDLADAAKRAG-TIQHYIYSSMPDHS--LY-G-----------------PWPAV  123 (350)
T ss_dssp             EECCCSTT-----------SCHHHHHHHHHHHHHHHS-CCSEEEEEECCCGG--GT-S-----------------SCCCC
T ss_pred             Eeeccccc-----------chhhhhhhHHHHHHHHhC-CCceEEEeeccccc--cC-C-----------------cccch
Confidence            87764321           123456788999999998 88888888864331  00 0                 12234


Q ss_pred             hhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc-ccc--ccccCCCeeeH-HHHHHH
Q 020334          163 SYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR-EEY--SILLNISMVHI-DDVARA  238 (327)
Q Consensus       163 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~i~v-~D~a~~  238 (327)
                      +|..+|...|.++.    +.+++++++||+.+++.......+......  ...+.. ...  .....++++++ +|++++
T Consensus       124 ~~~~~k~~~~~~~~----~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~  197 (350)
T d1xgka_         124 PMWAPKFTVENYVR----QLGLPSTFVYAGIYNNNFTSLPYPLFQMEL--MPDGTFEWHAPFDPDIPLPWLDAEHDVGPA  197 (350)
T ss_dssp             TTTHHHHHHHHHHH----TSSSCEEEEEECEEGGGCBSSSCSSCBEEE--CTTSCEEEEESSCTTSCEEEECHHHHHHHH
T ss_pred             hhhhhHHHHHHHHH----hhccCceeeeeceeeccccccccccccccc--cccccceeeecccCCCcceEEEeHHHHHHH
Confidence            57788887777654    468999999999988764332211110000  001111 111  11222567775 799999


Q ss_pred             HHHhhcCCC---CCceEEEeccccCHHHHHHHHHHhCC
Q 020334          239 HIFLLEYPD---AKGRYICSSAKLTIQEMAEFLSAKHP  273 (327)
Q Consensus       239 ~~~~~~~~~---~~~~y~~~~~~~s~~e~~~~i~~~~~  273 (327)
                      +..++..+.   .+..|+++++.+|+.|+++.+++.+|
T Consensus       198 v~~~l~~~~~~~~G~~~~~~g~~~T~~eia~~l~~~~G  235 (350)
T d1xgka_         198 LLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALN  235 (350)
T ss_dssp             HHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHT
T ss_pred             HHHHHhCChhhcCCeEEEEeCCcCCHHHHHHHHHHHHC
Confidence            999986532   35578888888999999999999877

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.90  E-value=2.1e-22  Score=164.77  Aligned_cols=206  Identities=17%  Similarity=0.127  Sum_probs=148.5

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .++|++|||||++.||.++++.|+++|++|++.+| +.+..             .++..+++|++|+++++++++     
T Consensus         5 l~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~~-------------~~~~~~~~Dv~~~~~v~~~~~~~~~~   70 (237)
T d1uzma1           5 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHR-GSGAP-------------KGLFGVEVDVTDSDAVDRAFTAVEEH   70 (237)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SSCCC-------------TTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-Ccchh-------------cCceEEEEecCCHHHHHHHHHHHHHh
Confidence            46799999999999999999999999999999999 43222             366789999999998877664     


Q ss_pred             --CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHH----HHhcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKS----CLKSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++|||||...      .+.+++. +.+++|+.++..+.+.    +++.+ ..++|++||......          
T Consensus        71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~-~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~----------  138 (237)
T d1uzma1          71 QGPVEVLVSNAGLSADAFLMRMTEEKFE-KVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWG----------  138 (237)
T ss_dssp             HSSCSEEEEECSCCC-----CCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-------------
T ss_pred             cCCceEEEeeecccccccHhhCCHHHHH-HHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccC----------
Confidence              5899999998654      2234454 8899999998777654    44444 579999999766521          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .+....|+.+|...+.+.+.++.++   |+++..+.||.+..+.... ....   ..... ....++.
T Consensus       139 ------------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~-~~~~---~~~~~-~~~~pl~  201 (237)
T d1uzma1         139 ------------IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA-LDER---IQQGA-LQFIPAK  201 (237)
T ss_dssp             --------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-SCHH---HHHHH-GGGCTTC
T ss_pred             ------------CcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhc-cCHH---HHHHH-HhcCCCC
Confidence                        1224579999999999999988764   8999999999987763211 1111   11111 1112222


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSS  256 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~  256 (327)
                           .+..++|+|+++++++....  ..| .+.++|
T Consensus       202 -----R~~~pedvA~~v~fL~S~~s~~itG~~i~vdG  233 (237)
T d1uzma1         202 -----RVGTPAEVAGVVSFLASEDASYISGAVIPVDG  233 (237)
T ss_dssp             -----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -----CCcCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence                 57899999999999996542  234 445544

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.89  E-value=3.6e-22  Score=164.98  Aligned_cols=216  Identities=15%  Similarity=0.133  Sum_probs=152.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|.+|||||++.||.++++.|++.|++|++.+| +.+.... ...+...   ..++.++.+|++|++++.++++     
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r-~~~~l~~~~~~l~~~---g~~~~~~~~Dvt~~~~v~~~~~~~~~~   84 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISR-TQKSCDSVVDEIKSF---GYESSGYAGDVSKKEEISEVINKILTE   84 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEES-SHHHHHHHHHHHHTT---TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC-CHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence            3688999999999999999999999999999999 4333322 2333322   3578999999999998887764     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+|+....      +.+++. ..+++|+.++..+.+++.    +.+ ..++|++||..... +         
T Consensus        85 ~g~iDilvnnag~~~~~~~~~~~~~~~~-~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~-~---------  152 (251)
T d2c07a1          85 HKNVDILVNNAGITRDNLFLRMKNDEWE-DVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLT-G---------  152 (251)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTCCHHHHH-HHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH-C---------
T ss_pred             cCCceeeeeccccccccccccccHHHHh-hhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcC-C---------
Confidence              68999999986541      223454 889999999877777544    444 57999999976542 1         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.+..... .   .......... .++.
T Consensus       153 ------------~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~-~---~~~~~~~~~~-~pl~  215 (251)
T d2c07a1         153 ------------NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI-S---EQIKKNIISN-IPAG  215 (251)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C-C---HHHHHHHHTT-CTTS
T ss_pred             ------------CCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc-C---HHHHHHHHhc-CCCC
Confidence                        1224579999999999999998764   89999999999988754322 1   1122222211 2222


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                           .+..++|+|+++++++....  ..| .+.+.|.
T Consensus       216 -----R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  248 (251)
T d2c07a1         216 -----RMGTPEEVANLACFLSSDKSGYINGRVFVIDGG  248 (251)
T ss_dssp             -----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence                 57899999999999996543  234 4455543

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=1.3e-22  Score=166.69  Aligned_cols=215  Identities=15%  Similarity=0.127  Sum_probs=153.1

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +.+|+++||||++.||.++++.|+++|++|++.+| +.+....+....     ..+..++.+|++|+++++++++     
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r-~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTAT-SENGAQAISDYL-----GANGKGLMLNVTDPASIESVLEKIRAE   75 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh-----CCCCcEEEEEecCHHHhhhhhhhhhcc
Confidence            35789999999999999999999999999999999 443333222211     2467889999999998877664     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+|+....      +.+++. ..+++|+.++..+.+++.    +.+ ..++|++||..... +         
T Consensus        76 ~g~iDilVnnAg~~~~~~~~~~~~~~~~-~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~-~---------  143 (243)
T d1q7ba_          76 FGEVDILVNNAGITRDNLLMRMKDEEWN-DIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTM-G---------  143 (243)
T ss_dssp             TCSCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH-C---------
T ss_pred             cCCcceehhhhhhccccccccccccccc-cccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcC-C---------
Confidence              58999999986542      233454 889999999888777664    334 57999999976542 1         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.+.......    ........ ..+..
T Consensus       144 ------------~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~----~~~~~~~~-~~pl~  206 (243)
T d1q7ba_         144 ------------NGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSD----DQRAGILA-QVPAG  206 (243)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH----HHHHHHHT-TCTTS
T ss_pred             ------------CCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhh----hHHHHHHh-cCCCC
Confidence                        1224579999999999999988764   8999999999887653222111    11111111 12222


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                           .+..++|+|+++.+++....  ..| .+.++|.
T Consensus       207 -----R~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG  239 (243)
T d1q7ba_         207 -----RLGGAQEIANAVAFLASDEAAYITGETLHVNGG  239 (243)
T ss_dssp             -----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence                 57899999999999997543  233 4556543

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=8.6e-22  Score=162.00  Aligned_cols=217  Identities=18%  Similarity=0.157  Sum_probs=154.1

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---CC
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---GC   79 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~   79 (327)
                      +.+|++|||||++.||.++++.|+++|++|++.+| +.+.   +..+...   .+++..+.+|++|+++++++++   ++
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r-~~~~---l~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~g~i   77 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSR-TQAD---LDSLVRE---CPGIEPVCVDLGDWEATERALGSVGPV   77 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHH---STTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC-CHHH---HHHHHHh---cCCCeEEEEeCCCHHHHHHHHHHhCCc
Confidence            35789999999999999999999999999999999 4322   2222211   1467899999999999998886   58


Q ss_pred             CEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           80 AGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        80 d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                      |++||+|+...      .+.+++. ..+++|+.++..+.+++.+    .+...++|++||......              
T Consensus        78 DilVnnAg~~~~~~~~~~~~~~~~-~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~--------------  142 (244)
T d1pr9a_          78 DLLVNNAAVALLQPFLEVTKEAFD-RSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA--------------  142 (244)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC--------------
T ss_pred             eEEEeccccccccchhhhhHHHHH-HHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccc--------------
Confidence            99999998654      2234454 8899999988877775543    222579999999765421              


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                              .+....|+.+|...+.+.+.++.++   |+++..+.||.+..|......... . ....... ..++.    
T Consensus       143 --------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~-~-~~~~~~~-~~pl~----  207 (244)
T d1pr9a_         143 --------VTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDP-H-KAKTMLN-RIPLG----  207 (244)
T ss_dssp             --------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSH-H-HHHHHHT-TCTTC----
T ss_pred             --------ccchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccCh-H-HHHHHHh-cCCCC----
Confidence                    1234579999999999999988764   899999999999877432211111 1 1111111 12222    


Q ss_pred             CCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          227 ISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                       .+..++|+|+++++++....  ..| .+.+.|.
T Consensus       208 -R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG  240 (244)
T d1pr9a_         208 -KFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             -SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCcCHHHHHHHHHHHhCchhCCcCCcEEEECcc
Confidence             58899999999999987543  234 4455543

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.89  E-value=1.9e-21  Score=162.43  Aligned_cols=221  Identities=15%  Similarity=0.191  Sum_probs=153.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||++.||.+++++|+++|++|++.+| +.+..+.. .++..    ..++.++.+|++|+++++++++     
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~~~~~~~~l~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADI-ADDHGQKVCNNIGS----PDVISFVHCDVTKDEDVRNLVDTTIAK   79 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHCC----TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHhcC----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999 43332222 22221    3568889999999998887764     


Q ss_pred             --CCCEEEEccCCCCCC--------CCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 --GCAGVIHVAAPIDID--------GKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 --~~d~vih~a~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                        ++|++||+||.....        .+++. ..+++|+.++..+.+++.    +.+ ..++|++||...+...       
T Consensus        80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~-~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~~~-------  150 (268)
T d2bgka1          80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFK-RVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAG-------  150 (268)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCC-------
T ss_pred             cCCcceeccccccccCCCcccccCcHHHHH-HHHHHhhcchhhhhhhhcchHhhcC-CCCccccccccccccc-------
Confidence              689999999864311        12344 788999999877777654    334 5689999987654211       


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    ......|+.+|...+.+.+.++.++   |+++..+.||.+-.|.........-............+
T Consensus       151 --------------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~  216 (268)
T d2bgka1         151 --------------EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANL  216 (268)
T ss_dssp             --------------TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSS
T ss_pred             --------------cccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhcccc
Confidence                          1113469999999999999988764   89999999999988864432222111111111111111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      ..     .+..++|+|+++++++....  ..| .+.+.|.
T Consensus       217 ~g-----r~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG  251 (268)
T d2bgka1         217 KG-----TLLRAEDVADAVAYLAGDESKYVSGLNLVIDGG  251 (268)
T ss_dssp             CS-----CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCcCHHHHHHHHHHHhChhhCCccCceEEECcC
Confidence            11     47789999999999996532  234 5566544

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=7.4e-22  Score=162.10  Aligned_cols=219  Identities=16%  Similarity=0.114  Sum_probs=155.0

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |.+.+|++|||||++.||.++++.|+++|++|++.+| +.+.   +..+.+.   ..++.++.+|++|+++++++++   
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~---l~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~g   73 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTR-TNSD---LVSLAKE---CPGIEPVCVDLGDWDATEKALGGIG   73 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHH---STTCEEEECCTTCHHHHHHHHTTCC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHHh---cCCCeEEEEeCCCHHHHHHHHHHcC
Confidence            7777899999999999999999999999999999999 4322   2222111   2467899999999999998887   


Q ss_pred             CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|++|||||....      +.+++. ..+++|+.++..+.+++.+    .+...++|++||......            
T Consensus        74 ~iDilVnnAg~~~~~~~~~~~~~~~~-~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~------------  140 (242)
T d1cyda_          74 PVDLLVNNAALVIMQPFLEVTKEAFD-RSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT------------  140 (242)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC------------
T ss_pred             CCeEEEECCccccchhHHHHHHHHHH-HHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcccc------------
Confidence            58999999986542      233444 8899999999888776543    222468999999764421            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.|........  ......... ..++.  
T Consensus       141 ----------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~--~~~~~~~~~-~~pl~--  205 (242)
T d1cyda_         141 ----------FPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD--PEFARKLKE-RHPLR--  205 (242)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC--HHHHHHHHH-HSTTS--
T ss_pred             ----------CCccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCC--HHHHHHHHh-cCCCC--
Confidence                      1224579999999999999998765   79999999998876632111010  011111111 11222  


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          225 LNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                         .+..++|+|+++++++....  ..| .+.+.|.
T Consensus       206 ---R~~~peeva~~v~fL~S~~s~~itG~~i~vDGG  238 (242)
T d1cyda_         206 ---KFAEVEDVVNSILFLLSDRSASTSGGGILVDAG  238 (242)
T ss_dssp             ---SCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred             ---CCcCHHHHHHHHHHHhCchhcCcCCceEEeCcc
Confidence               57889999999999986533  233 5556554

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.88  E-value=1.1e-21  Score=162.70  Aligned_cols=218  Identities=16%  Similarity=0.163  Sum_probs=153.9

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |.+.+|++|||||++.||.++++.|+++|++|++.+| +.+....+ .++      ..++.++.+|++|+++++++++  
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r-~~~~l~~~~~~~------~~~~~~~~~Dvt~~~~v~~~~~~~   73 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADI-NLEAARATAAEI------GPAACAIALDVTDQASIDRCVAEL   73 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEES-CHHHHHHHHHHH------CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHh------CCceEEEEeeCCCHHHHHHHHHHH
Confidence            7777899999999999999999999999999999999 43322222 222      2578899999999998887764  


Q ss_pred             -----CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCc
Q 020334           78 -----GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDM  142 (327)
Q Consensus        78 -----~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~  142 (327)
                           ++|++||+||....      +.+++. ..+++|+.++..+.+++..    .++..++|++||..... +      
T Consensus        74 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~-~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~-~------  145 (256)
T d1k2wa_          74 LDRWGSIDILVNNAALFDLAPIVEITRESYD-RLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR-G------  145 (256)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-C------
T ss_pred             HHHhCCccEEEeecccccccccccCCHHHHH-hhhceeeeccccchhhccchhHHhccCCccccccchhhcc-c------
Confidence                 68999999996542      233454 8899999998888775432    22257999999976542 0      


Q ss_pred             ccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHH-----
Q 020334          143 LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMV-----  214 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~-----  214 (327)
                                     .+....|+.+|...+.+.+.++.++   ||++..+.||.+-.|....    .........     
T Consensus       146 ---------------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~----~~~~~~~~~~~~~~  206 (256)
T d1k2wa_         146 ---------------EALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDG----VDAKFADYENLPRG  206 (256)
T ss_dssp             ---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHH----HHHHHHHHHTCCTT
T ss_pred             ---------------cccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhh----hhhhhhhhccCChH
Confidence                           1224579999999999999988765   8999999999888764211    000000000     


Q ss_pred             -----hCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          215 -----LGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       215 -----~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                           .....++     ..+..++|+|+++++++....  ..| .+.+.|.
T Consensus       207 ~~~~~~~~~~Pl-----gR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG  252 (256)
T d1k2wa_         207 EKKRQVGAAVPF-----GRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGG  252 (256)
T ss_dssp             HHHHHHHHHSTT-----SSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhcCCC-----CCCcCHHHHHHHHHHHhCchhCCccCceEEECcc
Confidence                 0001111     257889999999999986533  234 4556544

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.88  E-value=1.3e-21  Score=160.43  Aligned_cols=209  Identities=15%  Similarity=0.170  Sum_probs=151.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+|++|||||++.||.++++.|+++|++|++.+| +++....+....     ..++.++.+|++|+++++++++      
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDI-LDEEGKAMAAEL-----ADAARYVHLDVTQPAQWKAAVDTAVTAF   78 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHT-----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHh-----hCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999 443322221111     2467899999999998877664      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++||+||....      +.+++. +.+++|+.++..+.+.+.    +.+ ..++|++||..... +          
T Consensus        79 g~idilinnAG~~~~~~~~~~~~~~~~-~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~-~----------  145 (244)
T d1nffa_          79 GGLHVLVNNAGILNIGTIEDYALTEWQ-RILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLA-G----------  145 (244)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS-C----------
T ss_pred             CCCeEEEECCcccCCCchhhCCHHHHh-HHhhcccchhhHHHHHHHhHHHhcC-cceEEecccccccc-c----------
Confidence             68999999987542      233454 889999999888777543    333 57899999976542 1          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.|..... +..         ....++  
T Consensus       146 -----------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~-~~~---------~~~~pl--  202 (244)
T d1nffa_         146 -----------TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV-PED---------IFQTAL--  202 (244)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS-CTT---------CSCCSS--
T ss_pred             -----------cccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhh-hHH---------HHhccc--
Confidence                       1224579999999999999988765   89999999999887753221 110         011111  


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                         ..+..++|+|+++++++....  ..| .+.+.|.
T Consensus       203 ---~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG  236 (244)
T d1nffa_         203 ---GRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG  236 (244)
T ss_dssp             ---SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---cCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCC
Confidence               257899999999999986432  234 5556543

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.88  E-value=1.5e-21  Score=160.92  Aligned_cols=217  Identities=15%  Similarity=0.147  Sum_probs=147.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+|.+|||||++.||.++++.|+++|++|++.+|+. ... ....+...   ..++.++.+|++|+++++++++      
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~-~~~-~~~~~~~~---g~~~~~~~~Dvs~~~~v~~~~~~~~~~~   78 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP-APE-AEAAIRNL---GRRVLTVKCDVSQPGDVEAFGKQVISTF   78 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC-CHH-HHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCc-hHH-HHHHHHHc---CCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999999943 221 11112221   3578999999999998887664      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++||+||....      +.+++. ..+++|+.++..+.+++.    +.+ ..++|++||..... +          
T Consensus        79 G~iDilVnnAG~~~~~~~~~~~~e~~~-~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~-~----------  145 (247)
T d2ew8a1          79 GRCDILVNNAGIYPLIPFDELTFEQWK-KTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWL-K----------  145 (247)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGS-C----------
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHhh-hhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcc-c----------
Confidence             68999999987542      234555 889999999888777654    444 57999999976532 0          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                                 .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.|.........   ..........+++ 
T Consensus       146 -----------~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~l~-  210 (247)
T d2ew8a1         146 -----------IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA---MFDVLPNMLQAIP-  210 (247)
T ss_dssp             -----------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CTTSSSC-
T ss_pred             -----------CcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccch---hHHHHHHHhccCC-
Confidence                       1224579999999999999988764   899999999999877533211110   0111111111121 


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                          .+..++|+|+++++++....  ..| ...++|.
T Consensus       211 ----r~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  243 (247)
T d2ew8a1         211 ----RLQVPLDLTGAAAFLASDDASFITGQTLAVDGG  243 (247)
T ss_dssp             ----SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             ----CCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence                46788999999999987533  234 4556554

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.88  E-value=5.2e-22  Score=164.81  Aligned_cols=222  Identities=15%  Similarity=0.100  Sum_probs=153.5

Q ss_pred             CCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            2 EEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      .+.+|++|||||++.||.++++.|+++|++|++.+| +.+.. ....++...   ..++.++.+|++|+++++++++   
T Consensus         5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~l~~~~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d2ae2a_           5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSR-NQKELNDCLTQWRSK---GFKVEASVCDLSSRSERQELMNTVA   80 (259)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc---CCCceEEEeeCCCHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999 43332 222333222   3567889999999988776553   


Q ss_pred             -----CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCc
Q 020334           78 -----GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDM  142 (327)
Q Consensus        78 -----~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~  142 (327)
                           .+|++||+||....      +.+++. ..+++|+.++..+.+++.+    .+ ..++|++||......       
T Consensus        81 ~~~~~~idilvnnAG~~~~~~~~~~~~e~~~-~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~-------  151 (259)
T d2ae2a_          81 NHFHGKLNILVNNAGIVIYKEAKDYTVEDYS-LIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALA-------  151 (259)
T ss_dssp             HHTTTCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSC-------
T ss_pred             HHhCCCceEEEECCceeccCccccCCHHHHH-HHHhcccceeEEEEeeccchhhhhc-ccccccccccccccc-------
Confidence                 47999999986542      233444 8899999998887776543    33 579999999764320       


Q ss_pred             ccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCch-HHHHHHHHhCCc
Q 020334          143 LDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGS-VRSTLAMVLGNR  218 (327)
Q Consensus       143 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~-~~~~~~~~~~~~  218 (327)
                                     .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.|......... .......... .
T Consensus       152 ---------------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~-~  215 (259)
T d2ae2a_         152 ---------------VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLID-R  215 (259)
T ss_dssp             ---------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHH-T
T ss_pred             ---------------cccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHh-c
Confidence                           1224579999999999999998765   899999999998776321111111 1111111111 1


Q ss_pred             cccccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          219 EEYSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       219 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      .++.     .+..++|+|+++++++....  ..| .+.+.|.
T Consensus       216 ~pl~-----R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  252 (259)
T d2ae2a_         216 CALR-----RMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG  252 (259)
T ss_dssp             STTC-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCC-----CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence            1222     57889999999999997543  234 4456543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=2.3e-21  Score=159.68  Aligned_cols=215  Identities=15%  Similarity=0.098  Sum_probs=149.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+|++|||||++.||.++++.|+++|++|++.+| +.+..+..+.        .+..++++|++|+++++++++      
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~-~~~~~~~~~~--------~~~~~~~~Dv~~~~~v~~~~~~~~~~~   74 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDL-RPEGKEVAEA--------IGGAFFQVDLEDERERVRFVEEAAYAL   74 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-STTHHHHHHH--------HTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHH--------cCCeEEEEeCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999999999999 4433322222        245788999999988877664      


Q ss_pred             -CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++||+||...      .+.+++. +.+++|+.++..+.+++.+    .+ ..++|++||...+..           
T Consensus        75 G~iDiLVnnAG~~~~~~~~~~~~e~~~-~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~~~-----------  141 (248)
T d2d1ya1          75 GRVDVLVNNAAIAAPGSALTVRLPEWR-RVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFA-----------  141 (248)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSB-----------
T ss_pred             CCCCeEEEeCcCCCCCChhhCCHHHHH-HHHHhhhhhHhhhhhhhcccccccc-ccccccccccccccc-----------
Confidence             6899999998654      1223444 8899999998888776653    33 579999999875421           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC--CchHHHHHHHHhCCcccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKF--AGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~  221 (327)
                                 .+...+|+.+|...+.+.+.++.++   |+++..+.||.+-.|......  ........+.... ..++
T Consensus       142 -----------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~pl  209 (248)
T d2d1ya1         142 -----------EQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWED-LHAL  209 (248)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHT-TSTT
T ss_pred             -----------ccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHh-cCCC
Confidence                       1235679999999999999988775   899999999988765311000  0000000011111 1111


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                           ..+..++|+|+++.+++....  ..| .+.+.|.
T Consensus       210 -----~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  243 (248)
T d2d1ya1         210 -----RRLGKPEEVAEAVLFLASEKASFITGAILPVDGG  243 (248)
T ss_dssp             -----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcC
Confidence                 257789999999999986532  234 5556543

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.88  E-value=5e-21  Score=158.23  Aligned_cols=220  Identities=12%  Similarity=0.071  Sum_probs=154.5

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCC-ChhHHHHHhc--
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN-DPESFDAAIA--   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~--   77 (327)
                      |...+|+||||||++.||.+++++|+++|++|+++.| ..+....+..+..... ..++.++.+|++ +.++++++++  
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r-~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~   78 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILD-RVENPTALAELKAINP-KVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEE-SSCCHHHHHHHHHHCT-TSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEEC-CcccHHHHHHHHhhCC-CCCEEEEEeecCCCHHHHHHHHHHH
Confidence            6777899999999999999999999999999999988 4444444443322211 247889999998 5555655443  


Q ss_pred             -----CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhc------CCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -----GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKS------GTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -----~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                           ++|++|||||...  .+.++ +.+++|+.++..+.+++.+.      +...++|++||...+..           
T Consensus        79 ~~~~g~iDilvnnAG~~~--~~~~~-~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~-----------  144 (254)
T d1sbya1          79 FDQLKTVDILINGAGILD--DHQIE-RTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA-----------  144 (254)
T ss_dssp             HHHHSCCCEEEECCCCCC--TTCHH-HHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-----------
T ss_pred             HHHcCCCCEEEeCCCCCC--HHHHH-HHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC-----------
Confidence                 6899999999754  44565 89999999888887765532      12468999999776421           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC--CCchHHHHHHHHhCCcccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPK--FAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~  221 (327)
                                 .+....|+.+|.....+.+.++.++   |+++..+.||.|..|.....  .............      
T Consensus       145 -----------~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~------  207 (254)
T d1sbya1         145 -----------IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL------  207 (254)
T ss_dssp             -----------CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT------
T ss_pred             -----------CCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccc------
Confidence                       1224579999999988888887654   89999999999987621110  0000000111111      


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCCCCceEEEecc
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPDAKGRYICSSA  257 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~  257 (327)
                          .+.....+++|++++.+++....|.++.+.+.
T Consensus       208 ----~~~~~~~e~va~~~~~~~~~~~tG~vi~vdgG  239 (254)
T d1sbya1         208 ----SHPTQTSEQCGQNFVKAIEANKNGAIWKLDLG  239 (254)
T ss_dssp             ----TSCCEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred             ----cCCCCCHHHHHHHHHHhhhCCCCCCEEEECCC
Confidence                12456799999999999987765556777654

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.87  E-value=1.9e-21  Score=161.31  Aligned_cols=221  Identities=14%  Similarity=0.090  Sum_probs=152.5

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      +.+|++|||||++.||.+++++|+++|++|++.+|+..+.... .+.+...   ..++.++.+|++|+++++++++    
T Consensus         5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~---g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (261)
T d1geea_           5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV---GGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999943322222 2223222   3468889999999998887664    


Q ss_pred             ---CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 ---GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 ---~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                         ++|++||+||....      +.+++. +.+++|+.++..+.+++.    +.+....+|++||......         
T Consensus        82 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~-~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~---------  151 (261)
T d1geea_          82 EFGKLDVMINNAGLENPVSSHEMSLSDWN-KVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP---------  151 (261)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC---------
T ss_pred             HhCCCCEeeccceecCCcchhhcCHHHHH-HHHHHhcccchhHHHHHhhhhccccccccccccccchhccc---------
Confidence               68999999987542      233444 889999998877766543    4342456999999764310         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .+....|+.+|...+.+.+.++.++   ||++..+.||.+..|........  ........ ...++
T Consensus       152 -------------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~--~~~~~~~~-~~~pl  215 (261)
T d1geea_         152 -------------WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD--PEQRADVE-SMIPM  215 (261)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS--HHHHHHHH-TTCTT
T ss_pred             -------------CccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCC--HHHHHHHH-hcCCC
Confidence                         1224579999999999999988765   89999999999977642110000  01111111 11222


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      .     .+..++|+|+++++++....  ..| .+.+.|.
T Consensus       216 ~-----R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG  249 (261)
T d1geea_         216 G-----YIGEPEEIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_dssp             S-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C-----CCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            2     57789999999999996533  234 5556543

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.87  E-value=1.3e-21  Score=162.64  Aligned_cols=223  Identities=15%  Similarity=0.150  Sum_probs=149.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||++.||.++++.|+++|++|++.+|++....+.+ ..+....  ..++.++.+|++|+++++++++     
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH--GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH--TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999433222222 2221110  2478899999999998887764     


Q ss_pred             --CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||...      .+.+++. ..+++|+.++..+.+++    ++.+ ..++|++||......          
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~-~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~----------  148 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWD-AILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVA----------  148 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC----------
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhh-hhhhccccccccccchhhhhHhhcC-CceEeecccccceec----------
Confidence              5899999998654      2233454 88999999887766654    4444 579999999765421          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHH-------HHHHh
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRST-------LAMVL  215 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~-------~~~~~  215 (327)
                                  .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.|.............       .....
T Consensus       149 ------------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (260)
T d1x1ta1         149 ------------SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELL  216 (260)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CH
T ss_pred             ------------cCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHH
Confidence                        1224579999999999999988764   8999999999988774322111100000       00000


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      ....+.     ..+..++|+|+++++++....  ..| .+.+.|.
T Consensus       217 ~~~~Pl-----~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG  256 (260)
T d1x1ta1         217 SEKQPS-----LQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             HHHCTT-----CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HhcCCC-----CCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence            000111     257899999999999996532  234 4455543

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.87  E-value=2e-21  Score=161.11  Aligned_cols=222  Identities=16%  Similarity=0.126  Sum_probs=152.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||++.||.++++.|+++|++|++.+| +.+..... ..+... ....++.++.+|++|+++++++++     
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~l~~~~~~~~~~-~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDV-SSEGLEASKAAVLET-APDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH-CTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhh-CCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999 44332222 222111 112468889999999998887664     


Q ss_pred             --CCCEEEEccCCCC-------CCCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 --GCAGVIHVAAPID-------IDGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 --~~d~vih~a~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        ++|++||+||...       .+.+++. ..+++|+.++..+.+++.+    .+ ..++|++||..... +        
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~-~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~-~--------  149 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFD-KVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIR-G--------  149 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS-B--------
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHH-HHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhcc-C--------
Confidence              6899999998643       1223444 8899999999888876543    33 57999999976542 1        


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC----CCchHHHHHHHHhCC
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPK----FAGSVRSTLAMVLGN  217 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~----~~~~~~~~~~~~~~~  217 (327)
                                   .+....|+.+|...+.+.+.++.++   ||++..+.||.+..|.....    .............. 
T Consensus       150 -------------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-  215 (258)
T d1iy8a_         150 -------------IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQ-  215 (258)
T ss_dssp             -------------CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHT-
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHh-
Confidence                         1235679999999999999888764   89999999999876631100    00011111111111 


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      ..++.     .+..++|+|+++++++....  ..| ...+.|.
T Consensus       216 ~~pl~-----R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG  253 (258)
T d1iy8a_         216 VNPSK-----RYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG  253 (258)
T ss_dssp             TCTTC-----SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cCCCC-----CCcCHHHHHHHHHHHhCchhcCCcCceEEcCcc
Confidence            11122     57889999999999997532  234 4556543

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.87  E-value=2.2e-21  Score=160.86  Aligned_cols=206  Identities=17%  Similarity=0.159  Sum_probs=135.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||++.||.++++.|++.|++|++.+| +.+... ....+...   ..++..+.+|++|+++++++++     
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r-~~~~l~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCAR-NEYELNECLSKWQKK---GFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc---CCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999 433322 22233222   3578999999999988766553     


Q ss_pred             ---CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 ---GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 ---~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                         .+|++||+||...      .+.+++. ..+++|+.++..+.+++.    +.+ ..++|++||......         
T Consensus        83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~-~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~---------  151 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRSKPTLDYTAEDFS-FHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVS---------  151 (259)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------------
T ss_pred             hCCCcccccccccccCCCchhhCCHHHHH-HHHHHHhhhheeeehhhhhcccccc-ccccccccccccccc---------
Confidence               4899999998654      2233454 889999999888877654    334 579999999765421         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                   .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.|..........   ... .....++
T Consensus       152 -------------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~---~~~-~~~~~pl  214 (259)
T d1xq1a_         152 -------------ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEF---KKV-VISRKPL  214 (259)
T ss_dssp             ----------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------
T ss_pred             -------------ccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHH---HHH-HHhCCCC
Confidence                         1224579999999999999988765   8999999999998775332111111   000 0111122


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      .     .+..++|+|+++++++...
T Consensus       215 ~-----R~~~pedvA~~v~fL~S~~  234 (259)
T d1xq1a_         215 G-----RFGEPEEVSSLVAFLCMPA  234 (259)
T ss_dssp             --------CCGGGGHHHHHHHTSGG
T ss_pred             C-----CCcCHHHHHHHHHHHhCch
Confidence            2     4678899999999999643

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.87  E-value=2.7e-21  Score=159.60  Aligned_cols=220  Identities=16%  Similarity=0.145  Sum_probs=151.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||++.||.++++.|+++|++|++.+| +.+.. .....+.+..  ..++.++.+|++|+++++++++     
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~~~~~~~~l~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASR-NLEEASEAAQKLTEKY--GVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHHH--CCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHHHh--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999 43322 2222222111  2468889999999998877664     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||....      +.+++. ..+++|+.++..+.+++.+    .+ ..++|++||......+         
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~-~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~~~---------  149 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFR-QVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVT---------  149 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCC---------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhcccc---------
Confidence              68999999986542      233454 8899999998888776553    33 5699999986432101         


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                  .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.+........  ......... ..++.
T Consensus       150 ------------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~--~~~~~~~~~-~~pl~  214 (251)
T d1vl8a_         150 ------------MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD--PEKLDYMLK-RIPLG  214 (251)
T ss_dssp             ------------SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC--HHHHHHHHH-TCTTS
T ss_pred             ------------CccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCC--HHHHHHHHh-cCCCC
Confidence                        1224579999999999999988764   89999999999987643211000  011111111 11222


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                           .+..++|+|+++++++....  ..| ++.+.|.
T Consensus       215 -----R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG  247 (251)
T d1vl8a_         215 -----RTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG  247 (251)
T ss_dssp             -----SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcC
Confidence                 57788999999999987543  234 4556543

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.87  E-value=9.6e-21  Score=156.22  Aligned_cols=213  Identities=15%  Similarity=0.072  Sum_probs=148.8

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +.+|++|||||++.||.+++++|+++|++|++.+| +.+..   ..+.+..  ..++.++.+|++|+++++++++     
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r-~~~~~---~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADV-LDEEG---AATAREL--GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHH---HHHHHTT--GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC-CHHHH---HHHHHHh--CCceEEEEcccCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999 43222   2221111  2468899999999998887664     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                        ++|++||+||....      +.+++. ..+++|+.++..+.+++.    +.+ ..++|++||...+..          
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~-~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~~----------  144 (254)
T d1hdca_          77 FGSVDGLVNNAGISTGMFLETESVERFR-KVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMG----------  144 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC----------
T ss_pred             cCCccEEEecCccccccccccccccccc-hhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhccc----------
Confidence              68999999987542      223444 889999999888877654    334 579999999765421          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc-ccc
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR-EEY  221 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~  221 (327)
                                  .+....|+.+|...+.+.+.++.++   |+++..+.||.+..|...            ...... ...
T Consensus       145 ------------~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~------------~~~~~~~~~~  200 (254)
T d1hdca_         145 ------------LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA------------ETGIRQGEGN  200 (254)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH------------HHTCCCSTTS
T ss_pred             ------------ccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccch------------hcCHHHHHHH
Confidence                        1224579999999999999988764   799999999988765210            000000 000


Q ss_pred             ccccC-CCe-eeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          222 SILLN-ISM-VHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       222 ~~~~~-~~~-i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      ..... ..+ ..++|+|+++++++....  ..| .+.+.|.
T Consensus       201 ~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG  241 (254)
T d1hdca_         201 YPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG  241 (254)
T ss_dssp             CTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCceEEeCCC
Confidence            00000 123 358999999999996543  234 5566544

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.87  E-value=3.2e-21  Score=159.22  Aligned_cols=218  Identities=15%  Similarity=0.182  Sum_probs=151.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+|++|||||++.||.++++.|+++|++|++.+| +.+..........   ...++.++.+|++|+++++++++      
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r-~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGR-HSDVGEKAAKSVG---TPDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHC---CTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHhC---CCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999 4433333222222   13578999999999998877664      


Q ss_pred             -CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++||+||...      .+.+++. ..+++|+.++..+.+++.    +.+...++|++||..... +          
T Consensus        81 G~iDiLVnnAg~~~~~~~~~~~~~~~~-~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~-~----------  148 (251)
T d1zk4a1          81 GPVSTLVNNAGIAVNKSVEETTTAEWR-KLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV-G----------  148 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS-C----------
T ss_pred             CCceEEEeccccccccchhcccccchh-hhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec-c----------
Confidence             6899999998654      2233444 789999999888877654    333235899999976431 0          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH-----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE-----HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                 .+....|+.+|...+.+.+.++.+     +||++..+.||.+-.|..... ...  .... ......++
T Consensus       149 -----------~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~-~~~--~~~~-~~~~~~pl  213 (251)
T d1zk4a1         149 -----------DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-PGA--EEAM-SQRTKTPM  213 (251)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TTH--HHHH-TSTTTCTT
T ss_pred             -----------CCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhc-CCH--HHHH-HHHhCCCC
Confidence                       122457999999999988887654     379999999999977642211 110  0011 01111222


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      .     .+..++|+|+++++++....  ..| .+.+.|.
T Consensus       214 ~-----R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  247 (251)
T d1zk4a1         214 G-----HIGEPNDIAYICVYLASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             S-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C-----CCcCHHHHHHHHHHHhCchhCCCcCcEEEECcc
Confidence            2     57899999999999986533  234 4556543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.86  E-value=2.9e-21  Score=160.39  Aligned_cols=209  Identities=16%  Similarity=0.143  Sum_probs=147.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||++.||.++++.|+++|++|++.+| +.+..... ..+...   ..++..+.+|++|+++++++++     
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~l~~~~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDM-NREALEKAEASVREK---GVEARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHTT---TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999 44333222 223322   3578899999999988877664     


Q ss_pred             --CCCEEEEccCCCC-------CCCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 --GCAGVIHVAAPID-------IDGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 --~~d~vih~a~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        ++|++||+||...       .+.+++. ..+++|+.++..+.+++.+    .+ ..++|++||...+..         
T Consensus        80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~-~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~---------  148 (260)
T d1zema1          80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFA-RVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKG---------  148 (260)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSC---------
T ss_pred             hCCCCeehhhhccccccCccccccHHHHH-hhccccccccccchhhHHhhhhhhc-CCCCCeeechhhccC---------
Confidence              6899999998643       1223444 8899999998887776543    33 579999999765421         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCC------------CCCchHHH
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICP------------KFAGSVRS  209 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~------------~~~~~~~~  209 (327)
                                   .+...+|+.+|...+.+.+.++.++   |+++..+.||.|-.+....            ........
T Consensus       149 -------------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  215 (260)
T d1zema1         149 -------------PPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKV  215 (260)
T ss_dssp             -------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHH
T ss_pred             -------------CcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHH
Confidence                         1224579999999999999988775   7999999999987763100            00000111


Q ss_pred             HHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          210 TLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      ....... ..++.     .+..++|+|+++++++...
T Consensus       216 ~~~~~~~-~~Pl~-----R~g~pedvA~~v~fL~S~~  246 (260)
T d1zema1         216 VAQQMIG-SVPMR-----RYGDINEIPGVVAFLLGDD  246 (260)
T ss_dssp             HHHHHHH-TSTTS-----SCBCGGGSHHHHHHHHSGG
T ss_pred             HHHHHHh-cCCCC-----CCcCHHHHHHHHHHHhCch
Confidence            1111111 11121     5778999999999999753

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.86  E-value=3.6e-21  Score=159.44  Aligned_cols=215  Identities=18%  Similarity=0.191  Sum_probs=149.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      |.+|||||++.||.+++++|+++|++|++.+| +.+..... ..+...   ..++.++.+|++|++++.++++       
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~l~~~~~~i~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADY-NDATAKAVASEINQA---GGHAVAVKVDVSDRDQVFAAVEQARKTLG   77 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc---CCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            45699999999999999999999999999999 44333222 233322   3578899999999998887664       


Q ss_pred             CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|++||+||...      .+.+++. ..+++|+.++..+.+++.    +.+...+++++||...+. +           
T Consensus        78 ~iDilVnnAG~~~~~~~~~~~~~~~~-~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-~-----------  144 (255)
T d1gega_          78 GFDVIVNNAGVAPSTPIESITPEIVD-KVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV-G-----------  144 (255)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-C-----------
T ss_pred             CccEEEecccccccCcHHHhhhhhhh-hhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc-c-----------
Confidence            6899999998654      2233454 889999999988877643    333356899999976542 0           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHH-----------HHH
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRST-----------LAM  213 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~-----------~~~  213 (327)
                                .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.|...    ......           ...
T Consensus       145 ----------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~----~~~~~~~~~~~~~~~~~~~~  210 (255)
T d1gega_         145 ----------NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWA----EIDRQVSEAAGKPLGYGTAE  210 (255)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH----HHHHHHHHHHTCCTTHHHHH
T ss_pred             ----------CcccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHh----hhhhhhHhhhcccchhHHHH
Confidence                      1235679999999999999988764   899999999988665211    000000           000


Q ss_pred             HhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          214 VLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       214 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      .. ...++     ..+..++|+|+++++++....  ..| .+.+.|.
T Consensus       211 ~~-~~~pl-----~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG  251 (255)
T d1gega_         211 FA-KRITL-----GRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG  251 (255)
T ss_dssp             HH-TTCTT-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HH-hcCCC-----CCCcCHHHHHHHHHHHhCchhCCccCcEEEecCC
Confidence            00 11112     257889999999999997533  234 4556543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=8.7e-21  Score=156.21  Aligned_cols=216  Identities=17%  Similarity=0.150  Sum_probs=149.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+|++|||||++.||.++++.|+++|++|++.+| +.+...   .+.+.   .+++.++.+|++|+++++++++      
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~~~---~~~~~---~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDK-DESGGR---ALEQE---LPGAVFILCDVTQEDDVKTLVSETIRRF   77 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHH---HHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHH---HHHHh---cCCCeEEEccCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999999999999 433322   22211   2468899999999998887764      


Q ss_pred             -CCCEEEEccCCCCC-------CCCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 -GCAGVIHVAAPIDI-------DGKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 -~~d~vih~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                       ++|++||+||....       +.+++. +.+++|+.++..+.+++.+.  .+..++|++||......            
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~~~~~~-~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~------------  144 (250)
T d1ydea1          78 GRLDCVVNNAGHHPPPQRPEETSAQGFR-QLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIG------------  144 (250)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHC------------
T ss_pred             CCCCEEEecccccccccccccccHHHHH-HHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccc------------
Confidence             68999999985431       122344 88999999988877765532  01269999999765421            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCC---CCCchHHHHHHHHhCCcccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICP---KFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~  221 (327)
                                .+...+|+.+|...+.+.+.++.++   |+++..+.||.|-.|....   ..+.............  ++
T Consensus       145 ----------~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~--pl  212 (250)
T d1ydea1         145 ----------QAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQ--PL  212 (250)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTS--TT
T ss_pred             ----------ccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcC--CC
Confidence                      1234679999999999999988765   8999999999987653110   0111111111111211  12


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCC-CCCc-eEEEec
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYP-DAKG-RYICSS  256 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~-~~~~-~y~~~~  256 (327)
                      .     .+..++|+|+++++++... ...| .+.+.|
T Consensus       213 ~-----R~g~p~eva~~v~fL~Sda~~itG~~i~vDG  244 (250)
T d1ydea1         213 G-----RMGQPAEVGAAAVFLASEANFCTGIELLVTG  244 (250)
T ss_dssp             S-----SCBCHHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             C-----CCCCHHHHHHHHHHHhCccCCCcCCeEEECC
Confidence            2     5789999999999998531 1233 445544

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.86  E-value=1.2e-20  Score=156.41  Aligned_cols=219  Identities=14%  Similarity=0.109  Sum_probs=149.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||++.||.+++++|+++|++|++.+| +++.... .+.+...   ...+.++.+|+++.++++++++     
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r-~~~~l~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSR-NEKELDECLEIWREK---GLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc---CCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999 4433222 2233222   3567889999999998776553     


Q ss_pred             ---CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 ---GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 ---~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                         .+|+++|+|+....      +.+++. ..+++|+.++..+.+++.    +.+ ..++|++||......         
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~-~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~~~---------  149 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYN-IIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSA---------  149 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSC---------
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHh-hhhhhcccccccccccccccccccc-ccccccccccccccc---------
Confidence               37999999986552      334555 889999999888877655    333 679999999775421         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc--hHHHHHHHHhCCcc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAG--SVRSTLAMVLGNRE  219 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~  219 (327)
                                   .+....|+.+|...+.+.+.++.++   ||++..+.||.+..|........  ........... ..
T Consensus       150 -------------~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~  215 (258)
T d1ae1a_         150 -------------LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIV-KT  215 (258)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHH-HS
T ss_pred             -------------cccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHh-cC
Confidence                         1224579999999999999998775   79999999999988753321111  00111111110 11


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSS  256 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~  256 (327)
                      ++.     .+..++|+|.++++++....  ..| .+.++|
T Consensus       216 plg-----R~~~pediA~~v~fL~S~~s~~itG~~i~vDG  250 (258)
T d1ae1a_         216 PMG-----RAGKPQEVSALIAFLCFPAASYITGQIIWADG  250 (258)
T ss_dssp             TTC-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCC-----CCcCHHHHHHHHHHHhChhhCCCcCcEEEeCC
Confidence            222     58899999999999996432  344 444544

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.86  E-value=4.7e-21  Score=159.01  Aligned_cols=220  Identities=18%  Similarity=0.160  Sum_probs=153.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcc-hhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKK-DLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|.+|||||++.||.++++.|+++|++|++.+| +.+... ....+...   ..++.++.+|++|+++++++++      
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~l~~~~~~l~~~---g~~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCAR-GEEGLRTTLKELREA---GVEADGRTCDVRSVPEIEALVAAVVERY   77 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc---CCcEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999 433322 22333322   3578999999999998887764      


Q ss_pred             -CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHHhc-----CCccEEEEeccceeeeecCCCCCcccC
Q 020334           78 -GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCLKS-----GTVKRFVYTSSGSTVYFSGKDVDMLDE  145 (327)
Q Consensus        78 -~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~~~v~~SS~~v~~~~~~~~~~~~E  145 (327)
                       ++|++|||||...      .+.+++. +.+++|+.++..+.+++.+.     ....++|++||...+..          
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~e~~~-~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~----------  146 (257)
T d2rhca1          78 GPVDVLVNNAGRPGGGATAELADELWL-DVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG----------  146 (257)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSC----------
T ss_pred             CCCCEEEecccccCCCChHHcCHHHHH-HHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccc----------
Confidence             5899999998654      2233454 88999999999999987542     12568999999765421          


Q ss_pred             CCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC-------CCchHHHHHHHHh
Q 020334          146 TFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPK-------FAGSVRSTLAMVL  215 (327)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~-------~~~~~~~~~~~~~  215 (327)
                                  .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.|.....       .............
T Consensus       147 ------------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~  214 (257)
T d2rhca1         147 ------------VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRIT  214 (257)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred             ------------cccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHH
Confidence                        1224579999999999999999875   79999999998866531100       0000111111111


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      . ..++.     .+..++|+|+++++++....  ..| .+.+.|.
T Consensus       215 ~-~~Plg-----R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         215 A-RVPIG-----RYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             T-TSTTS-----SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             h-cCCCC-----CCcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence            1 12222     58899999999999996532  234 4456543

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.86  E-value=1.5e-21  Score=160.40  Aligned_cols=203  Identities=16%  Similarity=0.163  Sum_probs=145.7

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhh-hhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLS-FLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +.||||||++.||.+++++|+++|++|++.++++.+....+. .+...   ..++.++.+|++|+++++++++       
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY---GGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH---TCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc---CCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            579999999999999999999999999887764543333332 22221   2478899999999998877664       


Q ss_pred             CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|++||+|+...      .+.+++. +.+++|+.++..+.+++.    +.+ ..++|++||...+. +           
T Consensus        79 ~iDiLVnnAg~~~~~~~~~~~~~~~~-~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~-~-----------  144 (244)
T d1edoa_          79 TIDVVVNNAGITRDTLLIRMKKSQWD-EVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLI-G-----------  144 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH-C-----------
T ss_pred             CCCccccccccccccchhccchHHHH-HHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcC-C-----------
Confidence            6899999998654      2234455 889999999887776554    344 57999999976542 1           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.|..... .   ......... ..++.  
T Consensus       145 ----------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~-~---~~~~~~~~~-~~pl~--  207 (244)
T d1edoa_         145 ----------NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL-G---EDMEKKILG-TIPLG--  207 (244)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT-C---HHHHHHHHT-SCTTC--
T ss_pred             ----------CCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHh-h---HHHHHHHHh-cCCCC--
Confidence                      1224579999999999999988775   89999999998876632211 1   111122221 12222  


Q ss_pred             cCCCeeeHHHHHHHHHHhhcC
Q 020334          225 LNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~  245 (327)
                         .+..++|+|+++.+++..
T Consensus       208 ---R~~~p~dvA~~v~fLa~S  225 (244)
T d1edoa_         208 ---RTGQPENVAGLVEFLALS  225 (244)
T ss_dssp             ---SCBCHHHHHHHHHHHHHC
T ss_pred             ---CCcCHHHHHHHHHHHHCC
Confidence               578899999999998633

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.86  E-value=2.7e-21  Score=160.75  Aligned_cols=229  Identities=16%  Similarity=0.154  Sum_probs=153.7

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |...+|++|||||++.||.++++.|+++|++|++.+|+.........++....  ..++.++.+|++|+++++++++   
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~   82 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF--GVKTKAYQCDVSNTDIVTKTIQQID   82 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHHH
Confidence            45668999999999999999999999999999999994433222223332110  2478899999999998887764   


Q ss_pred             ----CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcc
Q 020334           78 ----GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ----~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                          ++|++||+|+....      +.+++. +.+++|+.++..+.+++.    +.+....++..||.......   ...+
T Consensus        83 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~---~~~~  158 (260)
T d1h5qa_          83 ADLGPISGLIANAGVSVVKPATELTHEDFA-FVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIIN---QSSL  158 (260)
T ss_dssp             HHSCSEEEEEECCCCCCCSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC---EEET
T ss_pred             HHhCCCcEecccccccccCCHHHhcccccc-ccccccccchhhhhhhhcccccccccceEEEEeecccccccc---cccc
Confidence                58999999986542      233444 889999998877766543    23335677777765433100   0000


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                      .            ..+....|+.+|...+.+.+.++.++   |+++..+.||.+-.+..... ..   ........ ..+
T Consensus       159 ~------------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~-~~---~~~~~~~~-~~p  221 (260)
T d1h5qa_         159 N------------GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM-DK---KIRDHQAS-NIP  221 (260)
T ss_dssp             T------------EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-CH---HHHHHHHH-TCT
T ss_pred             c------------cCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc-CH---HHHHHHHh-cCC
Confidence            0            01234679999999999999888764   89999999999977653321 11   11111111 112


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      +.     .+..++|+|+++++++....  ..| .+.+.|.
T Consensus       222 l~-----R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  256 (260)
T d1h5qa_         222 LN-----RFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG  256 (260)
T ss_dssp             TS-----SCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             CC-----CCcCHHHHHHHHHHHhcchhCCCcCceEEECCC
Confidence            22     57789999999999996543  234 4556554

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.86  E-value=6.3e-21  Score=156.46  Aligned_cols=214  Identities=18%  Similarity=0.167  Sum_probs=149.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+|++|||||++.||.+++++|+++|++|++.+| +.+..   ....+.  ...++.++++|++++++++++++      
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~---~~~~~~--~~~~~~~~~~Dls~~~~i~~~~~~i~~~~   77 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDR-EERLL---AEAVAA--LEAEAIAVVADVSDPKAVEAVFAEALEEF   77 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHH---HHHHHT--CCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHH---HHHHHH--cCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999 43222   222111  13578899999999998877664      


Q ss_pred             -CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHHhcCC-ccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           78 -GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCLKSGT-VKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        78 -~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                       ++|++||+|+...      .+.+++. +.+++|+.++..+.+++.+.-. .+.++.+||.+...               
T Consensus        78 g~iDiLinnAg~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~---------------  141 (241)
T d2a4ka1          78 GRLHGVAHFAGVAHSALSWNLPLEAWE-KVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG---------------  141 (241)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHH-HHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC---------------
T ss_pred             CCccEeccccccccccchhhhhccccc-cccccccccccccccccccccccccceeecccccccc---------------
Confidence             6899999998643      2223444 8899999999999988776532 34555555543221               


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccC
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLN  226 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (327)
                              .+....|+.+|...|.+.+.+++++   |+++..+.||.+-.+..... +.   ......... .+..    
T Consensus       142 --------~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~-~~---~~~~~~~~~-~p~~----  204 (241)
T d2a4ka1         142 --------AFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL-PP---WAWEQEVGA-SPLG----  204 (241)
T ss_dssp             --------HHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS-CH---HHHHHHHHT-STTC----
T ss_pred             --------ccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh-hH---hHHHHHHhC-CCCC----
Confidence                    1224579999999999999999876   69999999999877643321 11   111111111 2222    


Q ss_pred             CCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          227 ISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       227 ~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                       .+..++|+|+++.+++....  ..| ...++|.
T Consensus       205 -r~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG  237 (241)
T d2a4ka1         205 -RAGRPEEVAQAALFLLSEESAYITGQALYVDGG  237 (241)
T ss_dssp             -SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCcCHHHHHHHHHHHhcchhCCCcCceEEeCCC
Confidence             57799999999999997532  344 4445443

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.86  E-value=3e-21  Score=159.50  Aligned_cols=220  Identities=15%  Similarity=0.107  Sum_probs=148.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      .+|++|||||++.||.++++.|+++|++|++.+| +.+....+....     ..+..++.+|++|+++++++++      
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~-~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   78 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI-NEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECS-CHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHh-----CCCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence            3689999999999999999999999999999999 433322222111     2467889999999988877664      


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                       ++|++||+||....      +.+++. +.+++|+.++..+++++.+.  .+..++|++||..... +            
T Consensus        79 g~iDilVnnAG~~~~~~~~~~~~~~~~-~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~-~------------  144 (253)
T d1hxha_          79 GTLNVLVNNAGILLPGDMETGRLEDFS-RLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL-P------------  144 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS-C------------
T ss_pred             CCCCeEEecccccCCCCcccCCHHHHH-HHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhc-C------------
Confidence             68999999986541      223444 88999999887777765532  1137999999976542 0            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc-----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH-----GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                               .+....|+.+|...+.+.+.++.++     +|++..+.||.+..|......+.....  ....... ....
T Consensus       145 ---------~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~--~~~~~~~-~~~~  212 (253)
T d1hxha_         145 ---------IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSK--EMVLHDP-KLNR  212 (253)
T ss_dssp             ---------CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCH--HHHBCBT-TTBT
T ss_pred             ---------ccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhH--HHHHhCc-cccc
Confidence                     1234579999999888888776543     599999999998776321111110000  0011111 0000


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          224 LLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                        ...+..++|+|+++++++....  ..| .+.+.|.
T Consensus       213 --~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         213 --AGRAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             --TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             --cCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence              0157889999999999997533  234 4556554

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2e-20  Score=154.88  Aligned_cols=215  Identities=17%  Similarity=0.076  Sum_probs=146.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   77 (327)
                      +|++|||||++.||.++++.|+++|++|++.+| +.+.... ...+... ....++.++.+|++|+++++++++      
T Consensus         3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~~~~~~~~l~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDW-NLEAGVQCKAALHEQ-FEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHTTT-SCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHHh-cCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999999999999 4333222 2222221 112468899999999998887664      


Q ss_pred             -CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHH----hcC--CccEEEEeccceeeeecCCCCCcccCCCCCC
Q 020334           78 -GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCL----KSG--TVKRFVYTSSGSTVYFSGKDVDMLDETFWSD  150 (327)
Q Consensus        78 -~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~--~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~  150 (327)
                       ++|++||+|+....  .++. +.+++|+.++..+..++.    +.+  ...++|++||...+..               
T Consensus        81 G~iDilVnnAg~~~~--~~~~-~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~---------------  142 (254)
T d2gdza1          81 GRLDILVNNAGVNNE--KNWE-KTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP---------------  142 (254)
T ss_dssp             SCCCEEEECCCCCCS--SSHH-HHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC---------------
T ss_pred             CCcCeeccccccccc--ccch-heeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccC---------------
Confidence             68999999997543  3555 889999988776666554    322  1357999999765420               


Q ss_pred             hhHhhhcCCCchhhHhhhHHHHHHHHH--HHH---HcCCcEEEEecCceecCCCCCCC--------CchHHHHHHHHhCC
Q 020334          151 EDYIRKLDIWGKSYVLTKTLTERAALE--FAE---EHGLDLVTLIPSFVVGPFICPKF--------AGSVRSTLAMVLGN  217 (327)
Q Consensus       151 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~--~~~---~~~~~~~i~R~~~v~G~~~~~~~--------~~~~~~~~~~~~~~  217 (327)
                             .+....|+.+|...+.+.+.  ++.   .+|+++..+.||.+-.|......        ......+...    
T Consensus       143 -------~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~----  211 (254)
T d2gdza1         143 -------VAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDM----  211 (254)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHH----
T ss_pred             -------CCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhc----
Confidence                   12245799999999888774  333   34899999999988665311100        0001111110    


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCCCCCc-eEEEec
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYPDAKG-RYICSS  256 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~  256 (327)
                       .+..     .+..++|+|+++++++++....| +..++|
T Consensus       212 -~p~~-----r~~~pedvA~~v~fL~s~~~itG~~i~VdG  245 (254)
T d2gdza1         212 -IKYY-----GILDPPLIANGLITLIEDDALNGAIMKITT  245 (254)
T ss_dssp             -HHHH-----CCBCHHHHHHHHHHHHHCTTCSSCEEEEET
T ss_pred             -CCCC-----CCcCHHHHHHHHHHHHcCCCCCCCEEEECC
Confidence             1111     46788999999999998766555 445644

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.3e-20  Score=156.17  Aligned_cols=211  Identities=18%  Similarity=0.141  Sum_probs=143.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      ..|.+|||||++.||.++++.|+++|++|++.+| +.+....+ +++... ....++.++.+|++|++++.++++     
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r-~~~~l~~~~~~l~~~-~~~~~~~~~~~Dls~~~~v~~~v~~~~~~   86 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCAR-TVGNIEELAAECKSA-GYPGTLIPYRCDLSNEEDILSMFSAIRSQ   86 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT-TCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc-CCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            3588999999999999999999999999999999 44333322 223221 112468889999999998877664     


Q ss_pred             --CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHH----hcC-CccEEEEeccceeeeecCCCCCccc
Q 020334           78 --GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCL----KSG-TVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 --~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        ++|++||+|+...      .+.+.+. ..+++|+.++..+.+++.    +.+ ...++|++||...+...     |  
T Consensus        87 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~-~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~-----p--  158 (257)
T d1xg5a_          87 HSGVDICINNAGLARPDTLLSGSTSGWK-DMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL-----P--  158 (257)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC-----S--
T ss_pred             cCCCCEEEecccccCCCccccccHHHHH-hhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC-----C--
Confidence              6899999998654      2233444 889999988877766543    332 24699999997643100     0  


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH-----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE-----HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNRE  219 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  219 (327)
                                   ......|+.+|...+.+.+.++.+     +++++..+.||.+-.+.................     
T Consensus       159 -------------~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~-----  220 (257)
T d1xg5a_         159 -------------LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATY-----  220 (257)
T ss_dssp             -------------CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHH-----
T ss_pred             -------------CcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcC-----
Confidence                         012346999999999999888754     479999999987755421111111111111111     


Q ss_pred             ccccccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          220 EYSILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       220 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                      +.     ..++.++|+|+++++++..+.
T Consensus       221 ~~-----~r~~~pedvA~~v~fL~s~~a  243 (257)
T d1xg5a_         221 EQ-----MKCLKPEDVAEAVIYVLSTPA  243 (257)
T ss_dssp             C--------CBCHHHHHHHHHHHHHSCT
T ss_pred             CC-----CCCcCHHHHHHHHHHHhCChh
Confidence            11     257889999999999997753

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.4e-20  Score=157.51  Aligned_cols=222  Identities=15%  Similarity=0.115  Sum_probs=152.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCc-chhhhhhCC-C-CCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK-KDLSFLTNL-P-GASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~-~-~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      .+|++|||||++.||.+++++|+++|++|++.+| +.+.. ....++... . ....++..+.+|++|+++++++++   
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r-~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASR-KLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999 43332 222333221 1 113578899999999998887664   


Q ss_pred             ----CCCEEEEccCCCC------CCCCchHHHHHHHHHhHHHHHHHHHHhc----CCccEEEEeccceeeeecCCCCCcc
Q 020334           78 ----GCAGVIHVAAPID------IDGKETEEVMTQRAVNGTIGILKSCLKS----GTVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ----~~d~vih~a~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                          ++|++||+|+...      .+.+++. ..+++|+.++..+.+++.+.    + ..++|++||....+         
T Consensus        90 ~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~-~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss~~~~~---------  158 (297)
T d1yxma1          90 DTFGKINFLVNNGGGQFLSPAEHISSKGWH-AVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPTKAG---------  158 (297)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCCTTC---------
T ss_pred             HHhCCeEEEEeeccccccCchhhhhhhhhh-hhhcccccchhhHHHHHHHhhcccc-cccccccccccccc---------
Confidence                6899999998644      2233454 88999999998887766532    3 45788887643221         


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    .+....|+.+|...+.+.+.++.++   ||++..+.||.|..+.........-........ ...+
T Consensus       159 --------------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~-~~~p  223 (297)
T d1yxma1         159 --------------FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSF-QKIP  223 (297)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGG-GGST
T ss_pred             --------------ccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHH-hcCC
Confidence                          1224579999999999999998775   899999999999877432211111100000000 0111


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      +     ..+..++|+|+++++++....  ..| ++.+.|.
T Consensus       224 l-----gR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG  258 (297)
T d1yxma1         224 A-----KRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG  258 (297)
T ss_dssp             T-----SSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C-----CCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcC
Confidence            1     257789999999999996533  234 5556554

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.84  E-value=4.1e-20  Score=151.41  Aligned_cols=195  Identities=11%  Similarity=0.093  Sum_probs=143.0

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCe-------EEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYF-------VTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      ..||||||++.||.++++.|+++|++       |+..+| +.+....+ .++...   ..++.++.+|++|++++.++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r-~~~~l~~~~~~~~~~---g~~~~~~~~Dvt~~~~v~~~~~   77 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR-TAADLEKISLECRAE---GALTDTITADISDMADVRRLTT   77 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEES-CHHHHHHHHHHHHTT---TCEEEEEECCTTSHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeC-CHHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHH
Confidence            34799999999999999999999987       888888 44333222 222222   3568889999999998877664


Q ss_pred             -------CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCC
Q 020334           78 -------GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDV  140 (327)
Q Consensus        78 -------~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~  140 (327)
                             ++|++||+||....      +.+++. ..+++|+.++..+.+++.    +.+ ..++|++||...+..     
T Consensus        78 ~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~-~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~-----  150 (240)
T d2bd0a1          78 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFD-YTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKA-----  150 (240)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-----
T ss_pred             HHHHHcCCcceeecccccccCCccccCCHHHHh-hcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCC-----
Confidence                   58999999987542      233444 889999999877766554    434 579999999765421     


Q ss_pred             CcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCC
Q 020334          141 DMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGN  217 (327)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~  217 (327)
                                       .+....|+.+|...+.+.+.++.++   |++++.+.||.+-.|..... ....          
T Consensus       151 -----------------~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~-~~~~----------  202 (240)
T d2bd0a1         151 -----------------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV-DDEM----------  202 (240)
T ss_dssp             -----------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC-CSTT----------
T ss_pred             -----------------CCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhc-CHhh----------
Confidence                             1224579999999999999887764   89999999999987743221 1100          


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                              ...+..++|+|+++++++..+.
T Consensus       203 --------~~~~~~PedvA~~v~~l~s~~~  224 (240)
T d2bd0a1         203 --------QALMMMPEDIAAPVVQAYLQPS  224 (240)
T ss_dssp             --------GGGSBCHHHHHHHHHHHHTSCT
T ss_pred             --------HhcCCCHHHHHHHHHHHHcCCc
Confidence                    0135678999999999998764

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.84  E-value=4.6e-20  Score=150.73  Aligned_cols=209  Identities=14%  Similarity=0.062  Sum_probs=146.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh-hHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP-ESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~d~v   82 (327)
                      .+|++|||||++.||.++++.|+++|++|++.+| +.   +.++.        ...+++.+|+++. +.+.+.+.++|++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r-~~---~~l~~--------~~~~~~~~Dv~~~~~~~~~~~g~iD~l   70 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICAR-NE---ELLKR--------SGHRYVVCDLRKDLDLLFEKVKEVDIL   70 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CH---HHHHH--------TCSEEEECCTTTCHHHHHHHSCCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CH---HHHHh--------cCCcEEEcchHHHHHHHHHHhCCCcEE
Confidence            4789999999999999999999999999999999 43   22222        2457888999863 4455556689999


Q ss_pred             EEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccCCCCCChh
Q 020334           83 IHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDED  152 (327)
Q Consensus        83 ih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~  152 (327)
                      ||+||....      +.+++. +.+++|+.++..+.+++    ++.+ ..++|++||......                 
T Consensus        71 VnnAG~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~~-----------------  131 (234)
T d1o5ia_          71 VLNAGGPKAGFFDELTNEDFK-EAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISP-----------------  131 (234)
T ss_dssp             EECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-----------------
T ss_pred             EecccccCCcchhhhhhHHHH-HHhhhhhhhhhhhhhcccccccccc-ccccccccccccccc-----------------
Confidence            999986542      233444 77899999877776655    4444 568999999764421                 


Q ss_pred             HhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCe
Q 020334          153 YIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISM  229 (327)
Q Consensus       153 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (327)
                           .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.+..........   ..... ...++.     .+
T Consensus       132 -----~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~---~~~~~-~~~pl~-----R~  197 (234)
T d1o5ia_         132 -----IENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEK---KKQVE-SQIPMR-----RM  197 (234)
T ss_dssp             -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHH---HHHHH-TTSTTS-----SC
T ss_pred             -----ccccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHH---HHHHH-hcCCCC-----CC
Confidence                 1335579999999999999888765   8999999999887764322111111   11111 122222     58


Q ss_pred             eeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          230 VHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       230 i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      ..++|+|+++++++....  ..| ++.++|.
T Consensus       198 ~~pediA~~v~fL~S~~s~~itG~~i~vDGG  228 (234)
T d1o5ia_         198 AKPEEIASVVAFLCSEKASYLTGQTIVVDGG  228 (234)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhChhhcCCcCcEEEECcc
Confidence            899999999999986533  234 4556543

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.84  E-value=4.5e-20  Score=153.16  Aligned_cols=218  Identities=15%  Similarity=0.073  Sum_probs=146.7

Q ss_pred             CCCeEEEeCCcc--hhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            4 QKGKVCVTGGTG--FIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         4 ~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      .+|++|||||+|  .||.+++++|+++|++|++.+| +.............   ..+..++.+|++|+++++++++    
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~-~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQ-AERLRPEAEKLAEA---LGGALLFRADVTQDEELDALFAGVKE   82 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHHHH---TTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeC-cHHHHHHHHHhhhc---cCcccccccccCCHHHHHHHHHHHHH
Confidence            468999999998  7999999999999999998888 43333322222211   2456889999999998887664    


Q ss_pred             ---CCCEEEEccCCCC----------CCCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcc
Q 020334           78 ---GCAGVIHVAAPID----------IDGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ---~~d~vih~a~~~~----------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                         ++|++||+|+...          ...+++. ..+++|+.++..+.+++...- ...++|++||......        
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~-~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~--------  153 (256)
T d1ulua_          83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWL-LALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV--------  153 (256)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB--------
T ss_pred             hcCCceEEEeccccccccccccchhhhhhhhhh-HhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCC--------
Confidence               5899999998643          1112333 678999999999988876531 1368999999765421        


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    .+....|+.+|...+.+.+.++.++   |+++..+.||.+..+........  ......... ..+
T Consensus       154 --------------~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~--~~~~~~~~~-~~p  216 (256)
T d1ulua_         154 --------------VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF--TKMYDRVAQ-TAP  216 (256)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------C--HHHHHHHHH-HST
T ss_pred             --------------CCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhh--HHHHHHHHh-cCC
Confidence                          1335679999999999999998775   89999999999987754321111  111111111 112


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSS  256 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~  256 (327)
                      +.     .+..++|+|+++++++....  ..| .+.+.|
T Consensus       217 l~-----R~~~pedvA~~v~fL~S~~s~~itG~~i~VDG  250 (256)
T d1ulua_         217 LR-----RNITQEEVGNLGLFLLSPLASGITGEVVYVDA  250 (256)
T ss_dssp             TS-----SCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CC-----CCcCHHHHHHHHHHHhCchhCCccCCeEEECc
Confidence            22     57789999999999997543  234 445544

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.84  E-value=5.1e-20  Score=153.34  Aligned_cols=225  Identities=16%  Similarity=0.114  Sum_probs=145.7

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      +..|.+|||||++.||.+++++|+++|++|++.+| +.+.... ..++........++.++.+|++|+++++++++    
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGR-HAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999 4333222 23332221122468999999999998887664    


Q ss_pred             ---CCCEEEEccCCCCC----------CCCchHHHHHHHHHhHHHHHHHHHHhc--CCccEEEEeccce-eeeecCCCCC
Q 020334           78 ---GCAGVIHVAAPIDI----------DGKETEEVMTQRAVNGTIGILKSCLKS--GTVKRFVYTSSGS-TVYFSGKDVD  141 (327)
Q Consensus        78 ---~~d~vih~a~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~-v~~~~~~~~~  141 (327)
                         ++|++|||||....          +.+++. ..+++|+.++..+.+++.+.  .+...+|+++|.. ... +     
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~-~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~-~-----  154 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYD-ATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH-A-----  154 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSS-C-----
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHH-HHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccc-c-----
Confidence               68999999986421          122344 78999999987777765542  1124566665543 221 1     


Q ss_pred             cccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC-----CchHHHHHHH
Q 020334          142 MLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKF-----AGSVRSTLAM  213 (327)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~-----~~~~~~~~~~  213 (327)
                                      .+....|+.+|...+.+.+.++.++   |+++..+.||.|-.+......     ..........
T Consensus       155 ----------------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  218 (264)
T d1spxa_         155 ----------------TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMAT  218 (264)
T ss_dssp             ----------------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHH
T ss_pred             ----------------CCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHH
Confidence                            1224569999999999999988765   899999999999776432210     0001111111


Q ss_pred             HhCCccccccccCCCeeeHHHHHHHHHHhhcCC---CCCc-eEEEecc
Q 020334          214 VLGNREEYSILLNISMVHIDDVARAHIFLLEYP---DAKG-RYICSSA  257 (327)
Q Consensus       214 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~~-~y~~~~~  257 (327)
                      .. ...+..     .+..++|+|+++++++..+   ...| .+.+.|.
T Consensus       219 ~~-~~~Pl~-----R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG  260 (264)
T d1spxa_         219 MK-ECVPAG-----VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG  260 (264)
T ss_dssp             HH-HHCTTS-----SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HH-hcCCCC-----CCcCHHHHHHHHHHHhCCcccCCccCceEEeCCC
Confidence            11 111222     5788999999999999643   2334 4556543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.84  E-value=2.5e-20  Score=156.05  Aligned_cols=220  Identities=20%  Similarity=0.191  Sum_probs=149.3

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      |.+.+|++|||||++.||.+++++|+++|++|++.+| +.+....+..-.     ..++..+.+|++++++++++++   
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~   74 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDK-SAERLAELETDH-----GDNVLGIVGDVRSLEDQKQAASRCV   74 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHc-----CCCeeEEecccccHHHHHHHHHHHH
Confidence            7777899999999999999999999999999999999 433322221111     2468899999999988877654   


Q ss_pred             ----CCCEEEEccCCCCCC-------CC----chHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCC
Q 020334           78 ----GCAGVIHVAAPIDID-------GK----ETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGK  138 (327)
Q Consensus        78 ----~~d~vih~a~~~~~~-------~~----~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~  138 (327)
                          ++|++||+||.....       .+    .+. +.+++|+.++..+.+++.    +.+  .++|++||..... +  
T Consensus        75 ~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~-~~~~vNl~g~~~~~~~~~p~m~~~~--g~iI~i~S~~~~~-~--  148 (276)
T d1bdba_          75 ARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFD-EVFHINVKGYIHAVKACLPALVASR--GNVIFTISNAGFY-P--  148 (276)
T ss_dssp             HHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTS-T--
T ss_pred             HHhCCcccccccccccCCCCccccccccchhhhhh-HHHHHhhHHHHHHHHHHHHHHHhcC--CCceeeeechhcc-C--
Confidence                689999999864321       11    233 789999999877776654    333  5788888865431 1  


Q ss_pred             CCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHH-----HH
Q 020334          139 DVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH--GLDLVTLIPSFVVGPFICPKFAGSVRS-----TL  211 (327)
Q Consensus       139 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~v~G~~~~~~~~~~~~~-----~~  211 (327)
                                         .+....|+.+|...+.+.+.++.++  ++++..+.||.|-.+...+........     ..
T Consensus       149 -------------------~~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  209 (276)
T d1bdba_         149 -------------------NGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPL  209 (276)
T ss_dssp             -------------------TSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CH
T ss_pred             -------------------CCCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHH
Confidence                               1224579999999999999888775  599999999998776432211110000     01


Q ss_pred             HHHhCCccccccccCCCeeeHHHHHHHHHHhhcCC---CCCc-eEEEec
Q 020334          212 AMVLGNREEYSILLNISMVHIDDVARAHIFLLEYP---DAKG-RYICSS  256 (327)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~~-~y~~~~  256 (327)
                      ........++.     .+..++|+|+++++++..+   ...| .+++.|
T Consensus       210 ~~~~~~~~Plg-----R~g~peeva~~v~fL~S~~~a~~itG~~i~VDG  253 (276)
T d1bdba_         210 ADMLKSVLPIG-----RMPEVEEYTGAYVFFATRGDAAPATGALLNYDG  253 (276)
T ss_dssp             HHHHTTTCTTS-----SCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESS
T ss_pred             HHHHHhcCCCC-----CCcCHHHHHHHHHHHcCCcccCCeeCcEEEECc
Confidence            11111222222     5778999999999987532   2334 555644

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.84  E-value=6.8e-20  Score=152.20  Aligned_cols=223  Identities=16%  Similarity=0.071  Sum_probs=150.2

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      +.+|++|||||++.||.++++.|+++|++|++..|++....+.. ..+...   ..++.++.+|++|+++++++++    
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~---g~~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL---GAQGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc---CCCceEecCCCCCHHHHHHHHHHHHH
Confidence            34789999999999999999999999999998777444333322 223222   3578899999999998887664    


Q ss_pred             ---CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEecccee-eeecCCCCCcccCC
Q 020334           78 ---GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGST-VYFSGKDVDMLDET  146 (327)
Q Consensus        78 ---~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v-~~~~~~~~~~~~E~  146 (327)
                         .+|++||+||....      +.+.+. ..+++|+.++..+++.+.+.- +..+++.++|... .. +          
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~-~----------  148 (259)
T d1ja9a_          81 HFGGLDFVMSNSGMEVWCDELEVTQELFD-KVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT-G----------  148 (259)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC-S----------
T ss_pred             HcCCCcEEEeccccccccccccchHHHHH-HHHhhccceeeeehhhhhhhhhcCCccccccccccccc-C----------
Confidence               68999999987542      223344 889999999888888776531 1346666665432 21 0          


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCC--------CC-CCCchHHHHHHHH
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFI--------CP-KFAGSVRSTLAMV  214 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~--------~~-~~~~~~~~~~~~~  214 (327)
                                 .+....|+.+|...+.+++.++.++   |+++..+.||.+-.+..        .. ........+....
T Consensus       149 -----------~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (259)
T d1ja9a_         149 -----------IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGL  217 (259)
T ss_dssp             -----------CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHH
T ss_pred             -----------CCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHH
Confidence                       1224579999999999999988764   89999999999875421        00 1111111111211


Q ss_pred             hCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          215 LGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       215 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      ... .+..     .+..++|+++++++++....  ..| ...+.|.
T Consensus       218 ~~~-~pl~-----R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG  257 (259)
T d1ja9a_         218 ANM-NPLK-----RIGYPADIGRAVSALCQEESEWINGQVIKLTGG  257 (259)
T ss_dssp             HHT-STTS-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HhC-CCCC-----CCcCHHHHHHHHHHHhCchhcCCcCceEEeCCC
Confidence            111 1122     58899999999999998654  234 4556554

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.84  E-value=1.6e-19  Score=151.00  Aligned_cols=224  Identities=14%  Similarity=0.026  Sum_probs=151.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||++.||.++++.|+++|++|++.+|+..+..... ..+...   ..++.++.+|++|++++.++++     
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~---g~~~~~~~~D~~~~~~v~~~~~~~~~~   93 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN---GSDAACVKANVGVVEDIVRMFEEAVKI   93 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh---CCceeeEeCCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999998443332222 222221   3578899999999998877664     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                        ++|++||+++....      ..+.+. ..+++|+.++..+++++.+.= ...++++++|.......            
T Consensus        94 ~g~idilV~nag~~~~~~~~~~~~~~~~-~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~------------  160 (272)
T d1g0oa_          94 FGKLDIVCSNSGVVSFGHVKDVTPEEFD-RVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA------------  160 (272)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS------------
T ss_pred             hCCCCccccccccchhhhhhhhhhhHHH-HHhhhccceeeeecccccccccccccccccccccccccc------------
Confidence              68999999986542      223444 778999999998888877542 13577777775422100            


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCC--------CCCCCchHHHHHHHHhCC
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFI--------CPKFAGSVRSTLAMVLGN  217 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~--------~~~~~~~~~~~~~~~~~~  217 (327)
                               ......|+.+|...+.+.+.++.++   |+++..+.||.+-.+..        ..................
T Consensus       161 ---------~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (272)
T d1g0oa_         161 ---------VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ  231 (272)
T ss_dssp             ---------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH
T ss_pred             ---------ccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHc
Confidence                     1334579999999999999888764   89999999999876521        000001111111111111


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      ..++.     .+...+|+|+++.+++....  ..| ...++|.
T Consensus       232 ~~Plg-----R~~~peevA~~v~fL~s~~s~~itG~~i~vDGG  269 (272)
T d1g0oa_         232 WSPLR-----RVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG  269 (272)
T ss_dssp             SCTTC-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCCC-----CCcCHHHHHHHHHHHhCchhcCccCceEeECCC
Confidence            12222     58899999999999997543  244 3445544

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.84  E-value=6.1e-20  Score=153.55  Aligned_cols=225  Identities=13%  Similarity=0.076  Sum_probs=151.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||++.||.++++.|++.|++|++.+| +.+..... .++........++..+.+|++|+++++++++     
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGR-NEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999 44332222 2232221112468899999999998877664     


Q ss_pred             --CCCEEEEccCCCCC--------CCCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCccc
Q 020334           78 --GCAGVIHVAAPIDI--------DGKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 --~~d~vih~a~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                        ++|++||+||....        +.+++. ..+++|+.++..+.+++.+.   .+...++++||..... +        
T Consensus        82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~-~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~-~--------  151 (274)
T d1xhla_          82 FGKIDILVNNAGANLADGTANTDQPVELYQ-KTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ-A--------  151 (274)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS-C--------
T ss_pred             cCCceEEEeecccccccccccccCCHHHHH-HHHhhcccccccccccccccccccccccccchhhhhccc-c--------
Confidence              68999999985421        112344 78999999988777766542   2256788888755331 0        


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC-CchHH-HHHHHHh--CC
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKF-AGSVR-STLAMVL--GN  217 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~-~~~~~-~~~~~~~--~~  217 (327)
                                   .+....|+.+|...+.+.+.++.++   ||++..+.||.+-.|...... ..... .......  ..
T Consensus       152 -------------~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~  218 (274)
T d1xhla_         152 -------------HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKE  218 (274)
T ss_dssp             -------------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT
T ss_pred             -------------CCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHc
Confidence                         1224579999999999999888765   899999999999876322111 11111 1111111  11


Q ss_pred             ccccccccCCCeeeHHHHHHHHHHhhcCC---CCCc-eEEEecc
Q 020334          218 REEYSILLNISMVHIDDVARAHIFLLEYP---DAKG-RYICSSA  257 (327)
Q Consensus       218 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~~-~y~~~~~  257 (327)
                      ..++.     .+..++|+|+++++++..+   ...| .+.+.|.
T Consensus       219 ~iPlg-----R~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG  257 (274)
T d1xhla_         219 CIPVG-----HCGKPEEIANIIVFLADRNLSSYIIGQSIVADGG  257 (274)
T ss_dssp             TCTTS-----SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             CCCCC-----CCcCHHHHHHHHHHHcCCccccCccCcEEEeCcC
Confidence            12222     5789999999999998632   2334 5556544

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.5e-19  Score=147.16  Aligned_cols=219  Identities=16%  Similarity=0.142  Sum_probs=152.1

Q ss_pred             CC-CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--
Q 020334            1 ME-EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--   77 (327)
Q Consensus         1 m~-~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   77 (327)
                      |. +.+|++|||||++.||+++++.|+++|++|++.+| ++   ..++++.+.    .++.....|+.+.+.++....  
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r-~~---~~l~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~   72 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDI-NE---SKLQELEKY----PGIQTRVLDVTKKKQIDQFANEV   72 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CH---HHHGGGGGS----TTEEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeC-CH---HHHHHHHhc----cCCceeeeecccccccccccccc
Confidence            55 45689999999999999999999999999999999 43   233333322    467888999998877666553  


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHh----cCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLK----SGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       ++|++||+||....      +.+++. ..+++|+.++..+.+++.+    .+ ..++|++||...-- .     +    
T Consensus        73 ~~id~lVn~ag~~~~~~~~~~~~~~~~-~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~-~-----~----  140 (245)
T d2ag5a1          73 ERLDVLFNVAGFVHHGTVLDCEEKDWD-FSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSV-K-----G----  140 (245)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTT-B-----C----
T ss_pred             ccceeEEecccccCCCChhhCCHHHHH-HHHHHhhccchhHHHhhCcccccCC-Cceeeeeechhhcc-C-----C----
Confidence             78999999987552      233444 8899999999888776653    33 56899999854210 0     0    


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC--CchHHHHHHHHhCCcccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKF--AGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~  221 (327)
                                 ......|+.+|...+.+++.++.++   |+++..+.||.+-.|......  ............. ..++
T Consensus       141 -----------~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~pl  208 (245)
T d2ag5a1         141 -----------VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLK-RQKT  208 (245)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHH-TCTT
T ss_pred             -----------ccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHh-cCCC
Confidence                       1335679999999999999998775   899999999999876422100  0001111111111 1122


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSS  256 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~  256 (327)
                      .     .+..++|+|+++.+++....  ..| .+.++|
T Consensus       209 ~-----R~~~pedva~~v~fL~s~~s~~iTG~~i~VDG  241 (245)
T d2ag5a1         209 G-----RFATAEEIAMLCVYLASDESAYVTGNPVIIDG  241 (245)
T ss_dssp             S-----SCEEHHHHHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             C-----CCcCHHHHHHHHHHHhChhhCCCcCceEEeCC
Confidence            2     58899999999999997543  234 445554

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.4e-20  Score=152.92  Aligned_cols=198  Identities=14%  Similarity=0.081  Sum_probs=144.1

Q ss_pred             CCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            2 EEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      ...+|.++||||++.||.+++++|+++|++|++.+| +.++...+ .++...   ..++.++.+|++|++++.++++   
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r-~~~~l~~~~~~~~~~---~~~~~~~~~Dvs~~~~v~~~~~~i~   79 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDI-NKHGLEETAAKCKGL---GAKVHTFVVDCSNREDIYSSAKKVK   79 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc---CCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999 54333322 223222   3578999999999998887664   


Q ss_pred             ----CCCEEEEccCCCCCCC-----CchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCccc
Q 020334           78 ----GCAGVIHVAAPIDIDG-----KETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 ----~~d~vih~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                          .+|++|||||......     .+..++.+++|+.++..+.+++.    +.+ ..++|++||......         
T Consensus        80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~---------  149 (244)
T d1yb1a_          80 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVS---------  149 (244)
T ss_dssp             HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCC---------
T ss_pred             HHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCC---------
Confidence                5899999998765221     12223789999999887776544    444 579999999876521         


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH------cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE------HGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR  218 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~------~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~  218 (327)
                                   .+....|+.||...+.+.+.++.+      .|++++.+.||.|-.+....    ..           
T Consensus       150 -------------~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~----~~-----------  201 (244)
T d1yb1a_         150 -------------VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN----PS-----------  201 (244)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC----TH-----------
T ss_pred             -------------CCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC----cC-----------
Confidence                         122457999999999998888765      27999999999886654221    00           


Q ss_pred             cccccccCCCeeeHHHHHHHHHHhhcCC
Q 020334          219 EEYSILLNISMVHIDDVARAHIFLLEYP  246 (327)
Q Consensus       219 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~  246 (327)
                      ...     ...+.++|+|+.++..+...
T Consensus       202 ~~~-----~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         202 TSL-----GPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             HHH-----CCCCCHHHHHHHHHHHHHTT
T ss_pred             ccc-----cCCCCHHHHHHHHHHHHhcC
Confidence            001     13567899999999887664

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.83  E-value=1.2e-19  Score=151.55  Aligned_cols=224  Identities=15%  Similarity=0.110  Sum_probs=148.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++|||||++.||.++++.|+++|++|++.+| +.+..... ..+........++.++.+|++|+++++++++     
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGR-SSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999 44333222 2333222122468899999999998877664     


Q ss_pred             --CCCEEEEccCCCCCC------CC----chHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEecc-ceeeeecCCCCC
Q 020334           78 --GCAGVIHVAAPIDID------GK----ETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSS-GSTVYFSGKDVD  141 (327)
Q Consensus        78 --~~d~vih~a~~~~~~------~~----~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS-~~v~~~~~~~~~  141 (327)
                        ++|++||+||.....      .+    .+. ..+++|+.++..+.+++.+.   + ...+|+++| .+... +     
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~-~~~~vNl~~~~~~~~~~~p~m~~~-~g~iI~~~Ss~a~~~-~-----  154 (272)
T d1xkqa_          83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYH-KTLKLNLQAVIEMTKKVKPHLVAS-KGEIVNVSSIVAGPQ-A-----  154 (272)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSS-C-----
T ss_pred             hCCceEEEeCCcccCcccccccchhccHHHHH-HHHHhhhhHHHHHHHhhccccccc-CCccccccchhcccc-C-----
Confidence              689999999865421      11    233 77899999988887765542   1 234555554 33221 0     


Q ss_pred             cccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC-Cch-HHHHHHHH--
Q 020334          142 MLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKF-AGS-VRSTLAMV--  214 (327)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~-~~~-~~~~~~~~--  214 (327)
                                      .+....|+.+|...+.+.+.++.++   |+++..+.||.|-.|...... ... ........  
T Consensus       155 ----------------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~  218 (272)
T d1xkqa_         155 ----------------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMAS  218 (272)
T ss_dssp             ----------------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH
T ss_pred             ----------------CCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHH
Confidence                            1224579999999999999888764   899999999998776422111 111 11111111  


Q ss_pred             hCCccccccccCCCeeeHHHHHHHHHHhhcCC---CCCc-eEEEecc
Q 020334          215 LGNREEYSILLNISMVHIDDVARAHIFLLEYP---DAKG-RYICSSA  257 (327)
Q Consensus       215 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~~-~y~~~~~  257 (327)
                      .....++.     .+..++|+|+++++++...   ...| ++.+.|.
T Consensus       219 ~~~~~Plg-----R~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG  260 (272)
T d1xkqa_         219 HKECIPIG-----AAGKPEHIANIILFLADRNLSFYILGQSIVADGG  260 (272)
T ss_dssp             CTTTCTTS-----SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HhcCCCCC-----CCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcC
Confidence            11122222     5889999999999998632   2344 4556543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=7.1e-19  Score=147.75  Aligned_cols=220  Identities=18%  Similarity=0.146  Sum_probs=144.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcC--CCCCcchhhhh-hCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRS--DPEHKKDLSFL-TNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~--~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      +|.||||||++.||.++++.|++.|++|+.+.+.  +......+.+. ........++..+.+|++|++++.++++    
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            4567899999999999999999999876554431  32222222222 2222224678999999999999988774    


Q ss_pred             -CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHH----HhcCCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 -GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSC----LKSGTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 -~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                       .+|+++|+|+....      +.+++. ..+++|+.++.++.+++    ++.+ ..++|++||......           
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~-~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~-----------  148 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVA-SVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMG-----------  148 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSC-----------
T ss_pred             cchhhhhhcccccccccccchhHhhhh-hhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCC-----------
Confidence             47999999986542      223444 88999999988777754    4444 579999999765420           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCch-----------HHHHHH
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGS-----------VRSTLA  212 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~-----------~~~~~~  212 (327)
                                 .+....|+.+|...+.+.+.++.++   |++++.+.||.|-.+.........           ...+..
T Consensus       149 -----------~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (285)
T d1jtva_         149 -----------LPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQ  217 (285)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHH
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHH
Confidence                       1235579999999999999888764   899999999998776432211110           001111


Q ss_pred             HHh-CCccccccccCCCeeeHHHHHHHHHHhhcCCCCCceEE
Q 020334          213 MVL-GNREEYSILLNISMVHIDDVARAHIFLLEYPDAKGRYI  253 (327)
Q Consensus       213 ~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~y~  253 (327)
                      ... ......     .....++|+|++++++++.+.+.-.|.
T Consensus       218 ~~~~~~~~~~-----~~~~~PeeVA~~v~~~~~~~~p~~ry~  254 (285)
T d1jtva_         218 YLAHSKQVFR-----EAAQNPEEVAEVFLTALRAPKPTLRYF  254 (285)
T ss_dssp             HHHHHHHHHH-----HHCBCHHHHHHHHHHHHHCSSCCSEEE
T ss_pred             HHHHHhhhhc-----ccCCCHHHHHHHHHHHHhCCCCCeEEe
Confidence            000 000000     135678999999999998865443444

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.81  E-value=3.7e-19  Score=146.95  Aligned_cols=212  Identities=10%  Similarity=0.032  Sum_probs=143.7

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------CC
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------GC   79 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   79 (327)
                      ++|||||++.||.++++.|+++|++|++.+| +.+....+....        ..+..+|++|.++++++++       ++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r-~~~~~~~~~~~~--------~~~~~~dv~~~~~~~~~~~~~~~~~G~i   72 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDE-SFKQKDELEAFA--------ETYPQLKPMSEQEPAELIEAVTSAYGQV   72 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCG-GGGSHHHHHHHH--------HHCTTSEECCCCSHHHHHHHHHHHHSCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHhhh--------CcEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999999 444443333221        1334578877766655543       68


Q ss_pred             CEEEEccCCCC-C------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           80 AGVIHVAAPID-I------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        80 d~vih~a~~~~-~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                      |++|||||... .      +.+++. ..+++|+.++..+.+++.    +.+ ..++|++||...+..             
T Consensus        73 DiLVnNAg~~~~~~~~~~~~~e~~~-~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~-------------  137 (252)
T d1zmta1          73 DVLVSNDIFAPEFQPIDKYAVEDYR-GAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGP-------------  137 (252)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSC-------------
T ss_pred             CEEEECCcCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHhhcccc-cceeecccccccccc-------------
Confidence            99999998542 1      123344 778999988877776544    444 579999999765421             


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCch----HHHHHHHHhCCcccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGS----VRSTLAMVLGNREEY  221 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~----~~~~~~~~~~~~~~~  221 (327)
                               .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.+.........    ......... ...++
T Consensus       138 ---------~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~-~~~pl  207 (252)
T d1zmta1         138 ---------WKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVK-KVTAL  207 (252)
T ss_dssp             ---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHH-HHSSS
T ss_pred             ---------cccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHH-hcCCC
Confidence                     1224579999999999999988765   899999999999887543322110    011111111 11122


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPDA--KG-RYICSSA  257 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~~  257 (327)
                      .     .+..++|+|+++++++.....  .| .+.+.|.
T Consensus       208 ~-----R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG  241 (252)
T d1zmta1         208 Q-----RLGTQKELGELVAFLASGSCDYLTGQVFWLAGG  241 (252)
T ss_dssp             S-----SCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred             C-----CCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            2     578999999999999976532  33 4556544

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.80  E-value=1.6e-18  Score=146.78  Aligned_cols=221  Identities=15%  Similarity=0.119  Sum_probs=144.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-------   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   77 (327)
                      +|++|||||+|.||.+++++|+++|++|++.+|+..........+....  ...+..+.+|++|.+++.+++.       
T Consensus        25 gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          25 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT--GNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc--CCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            4889999999999999999999999999999993322222223332211  2467889999999998876553       


Q ss_pred             CCCEEEEccCCCCCC------CCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 GCAGVIHVAAPIDID------GKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 ~~d~vih~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                      ++|++||+||.....      ..++. ..+.+|......+...+.    .......++.+||..... .           
T Consensus       103 ~iDilvnnAg~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~-~-----------  169 (294)
T d1w6ua_         103 HPNIVINNAAGNFISPTERLSPNAWK-TITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET-G-----------  169 (294)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH-C-----------
T ss_pred             ccchhhhhhhhccccccccchhhhhh-hheeeecccchhhhhhhhcccccccccccccccccchhhh-c-----------
Confidence            689999999865422      12233 667778777666654432    222245677777754331 0           


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSIL  224 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (327)
                                .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.+.........- ........ ..+..  
T Consensus       170 ----------~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~-~~~~~~~~-~~pl~--  235 (294)
T d1w6ua_         170 ----------SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTG-TFEKEMIG-RIPCG--  235 (294)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTS-HHHHHHHT-TCTTS--
T ss_pred             ----------ccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcH-HHHHHHhh-cCCCC--
Confidence                      1224579999999999999988765   8999999999998875432211111 11111111 11222  


Q ss_pred             cCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          225 LNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       225 ~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                         .+..++|+|+++.+++....  ..| +..+.|+
T Consensus       236 ---R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG  268 (294)
T d1w6ua_         236 ---RLGTVEELANLAAFLCSDYASWINGAVIKFDGG  268 (294)
T ss_dssp             ---SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ---CCCCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence               57789999999999997533  334 4556544

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.80  E-value=4e-19  Score=147.74  Aligned_cols=206  Identities=21%  Similarity=0.190  Sum_probs=143.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCc---chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHK---KDLSFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      .++||||||+|.||.+++++|+++|+ .|+.+.|+.....   .....+...   ..++.++.+|++|++++.++++   
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~---g~~v~~~~~Dv~d~~~~~~~~~~i~   85 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL---GARTTVAACDVTDRESVRELLGGIG   85 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc---cccccccccccchHHHHHHhhcccc
Confidence            56899999999999999999999998 4777888422211   112222222   3578999999999999988775   


Q ss_pred             ---CCCEEEEccCCCCCC-----CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCCCcccCCCCC
Q 020334           78 ---GCAGVIHVAAPIDID-----GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDVDMLDETFWS  149 (327)
Q Consensus        78 ---~~d~vih~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~  149 (327)
                         .+|.|+|+++.....     ........++.|+.++.++.+.++..+ ..++|++||.......             
T Consensus        86 ~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~~~g~-------------  151 (259)
T d2fr1a1          86 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGA-------------  151 (259)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCC-------------
T ss_pred             ccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeecchhhccCC-------------
Confidence               368999999875522     112223678899999999999888766 7799999998764211             


Q ss_pred             ChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCe
Q 020334          150 DEDYIRKLDIWGKSYVLTKTLTERAALEFAEEHGLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISM  229 (327)
Q Consensus       150 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (327)
                               +....|+.+|...+.+.+.+.. .|++++.+.||.+.+++....   .+   ...+...+        ...
T Consensus       152 ---------~~~~~YaAaka~l~~la~~~~~-~Gi~v~~I~pg~~~~~g~~~~---~~---~~~~~~~G--------~~~  207 (259)
T d2fr1a1         152 ---------PGLGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMAEG---PV---ADRFRRHG--------VIE  207 (259)
T ss_dssp             ---------TTCTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC------------------CTTTT--------EEC
T ss_pred             ---------cccHHHHHHHHhHHHHHHHHHh-CCCCEEECCCCcccCCccccc---hH---HHHHHhcC--------CCC
Confidence                     2244699999999998887765 699999999998887653211   00   11111111        135


Q ss_pred             eeHHHHHHHHHHhhcCCCCCce
Q 020334          230 VHIDDVARAHIFLLEYPDAKGR  251 (327)
Q Consensus       230 i~v~D~a~~~~~~~~~~~~~~~  251 (327)
                      +.++++++++..++..+.....
T Consensus       208 ~~~~~~~~~l~~~l~~~~~~~~  229 (259)
T d2fr1a1         208 MPPETACRALQNALDRAEVCPI  229 (259)
T ss_dssp             BCHHHHHHHHHHHHHTTCSSCE
T ss_pred             CCHHHHHHHHHHHHhCCCceEE
Confidence            6799999999999988654433

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.79  E-value=3.7e-18  Score=140.76  Aligned_cols=170  Identities=21%  Similarity=0.196  Sum_probs=124.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHH---HCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLL---DHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~---~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      ||+||||||++.||.+++++|+   ++|++|++.+| +.+....+..+...   ..++.++.+|++|+++++++++    
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~Dvs~~~~v~~~~~~i~~   77 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCR-NREQAKELEDLAKN---HSNIHILEIDLRNFDAYDKLVADIEG   77 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEES-CTTSCHHHHHHHHH---CTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEEC-CHHHHHHHHHHHhc---CCcEEEEEEEeccHHHHHHHHhhhHH
Confidence            6799999999999999999997   46999999999 55555444443322   3589999999999987765543    


Q ss_pred             -----CCCEEEEccCCCCCC-------CCchHHHHHHHHHhHHHHHHHHHHhc--------------CCccEEEEeccce
Q 020334           78 -----GCAGVIHVAAPIDID-------GKETEEVMTQRAVNGTIGILKSCLKS--------------GTVKRFVYTSSGS  131 (327)
Q Consensus        78 -----~~d~vih~a~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~~~--------------~~~~~~v~~SS~~  131 (327)
                           ++|++||+||.....       .+++ .+.+++|+.++..+.+++...              ....++|++||..
T Consensus        78 ~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~-~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~  156 (248)
T d1snya_          78 VTKDQGLNVLFNNAGIAPKSARITAVRSQEL-LDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL  156 (248)
T ss_dssp             HHGGGCCSEEEECCCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred             HhhcCCcceEEeeccccccCcccccCCHHHH-HHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccc
Confidence                 589999999864321       1123 378999999988877765421              0146899999965


Q ss_pred             eeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCC
Q 020334          132 TVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPF  198 (327)
Q Consensus       132 v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~  198 (327)
                      ..-..    .+               .+....|+.||.....+.+.++.++   |+++..+.||.|-.+.
T Consensus       157 g~~~~----~~---------------~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m  207 (248)
T d1snya_         157 GSIQG----NT---------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM  207 (248)
T ss_dssp             GCSTT----CC---------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred             cccCC----CC---------------CCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence            32100    00               1224479999999999888887654   7999999999987764

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.79  E-value=4.8e-18  Score=140.23  Aligned_cols=202  Identities=17%  Similarity=0.205  Sum_probs=132.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      +|+||||||++.||.+++++|+++|+  .|++..| +.+....   +...  ...++.++.+|++|.++++++++     
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R-~~~~~~~---l~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   76 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR-DVEKATE---LKSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEES-SGGGCHH---HHTC--CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeC-CHHHHHH---HHHh--hCCceEEEEEecCCHHHHHHHHHHHHHH
Confidence            68999999999999999999999995  6888888 4433333   3222  13579999999999988776543     


Q ss_pred             ----CCCEEEEccCCCCC----C---CCchHHHHHHHHHhHHHHHHHHHHh----cC----------CccEEEEecccee
Q 020334           78 ----GCAGVIHVAAPIDI----D---GKETEEVMTQRAVNGTIGILKSCLK----SG----------TVKRFVYTSSGST  132 (327)
Q Consensus        78 ----~~d~vih~a~~~~~----~---~~~~~~~~~~~nv~~~~~l~~~~~~----~~----------~~~~~v~~SS~~v  132 (327)
                          ++|++|||||....    .   .+.+ .+.+++|+.++..+.+.+..    .+          ...+++.+||...
T Consensus        77 ~~~~~idilinnAG~~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~  155 (250)
T d1yo6a1          77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVI-AEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCBCTTSCCCHHHH-HHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             hCCCCeEEEEEcCcccCCCCccccCCHHHH-HHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccc
Confidence                38999999986431    1   1223 37899999999888776542    11          1246777776543


Q ss_pred             eeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHH
Q 020334          133 VYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRS  209 (327)
Q Consensus       133 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~  209 (327)
                      ....     ......          ..+...|+.||.....+.+.++.++   |++++.+.||.|-.+....        
T Consensus       156 ~~~~-----~~~~~~----------~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~--------  212 (250)
T d1yo6a1         156 SITD-----NTSGSA----------QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK--------  212 (250)
T ss_dssp             CSTT-----CCSTTS----------SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------
T ss_pred             cccC-----Cccccc----------chhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCC--------
Confidence            3100     000010          1334569999999999999988764   8999999999886542110        


Q ss_pred             HHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCceEE
Q 020334          210 TLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKGRYI  253 (327)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~y~  253 (327)
                              .         ..+.+++.++.++..+....  ..|.|.
T Consensus       213 --------~---------~~~~~e~~a~~~~~~~~~~~~~~sG~f~  241 (250)
T d1yo6a1         213 --------N---------AALTVEQSTAELISSFNKLDNSHNGRFF  241 (250)
T ss_dssp             -----------------------HHHHHHHHHHHTTCCGGGTTCEE
T ss_pred             --------C---------CCCCHHHHHHHHHHHHhcCCCCCCeEEE
Confidence                    0         13456788888888886543  235453

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=8.1e-18  Score=138.78  Aligned_cols=208  Identities=14%  Similarity=0.138  Sum_probs=141.8

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      ..+|.+|||||++.||.+++++|+++|++|++.+|+........+.+      .........|+.+...+++...     
T Consensus         3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l------~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL------GNNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH------CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh------CCCcccccccccccccccccccccccc
Confidence            35789999999999999999999999999999999443322223333      2467888899998876654432     


Q ss_pred             --CCCEEEEccCCCCC------------CCCchHHHHHHHHHhHHHHHHHHHHhc---------CCccEEEEeccceeee
Q 020334           78 --GCAGVIHVAAPIDI------------DGKETEEVMTQRAVNGTIGILKSCLKS---------GTVKRFVYTSSGSTVY  134 (327)
Q Consensus        78 --~~d~vih~a~~~~~------------~~~~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~~~v~~SS~~v~~  134 (327)
                        ..|.++++++....            ..+.+. ..+++|+.++..+.+++.+.         ....++|++||...+.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~  155 (248)
T d2o23a1          77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQ-RVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE  155 (248)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHH-HHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             cccccccccccccccCCCcccccccccchHHHHH-HHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc
Confidence              57888888754321            112333 78999999999988887542         1135899999986542


Q ss_pred             ecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHH
Q 020334          135 FSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTL  211 (327)
Q Consensus       135 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~  211 (327)
                       +                     .+....|+.+|...+.+.+.++.++   |+++..+.||.+..+.........    .
T Consensus       156 -~---------------------~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~----~  209 (248)
T d2o23a1         156 -G---------------------QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKV----C  209 (248)
T ss_dssp             -C---------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------
T ss_pred             -C---------------------CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHH----H
Confidence             1                     1335679999999999999998775   899999999998776433211111    1


Q ss_pred             HHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCCC
Q 020334          212 AMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPDA  248 (327)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  248 (327)
                      ...... .++    ...+..++|+|++++++++....
T Consensus       210 ~~~~~~-~pl----~~R~g~peevA~~v~fL~s~~~i  241 (248)
T d2o23a1         210 NFLASQ-VPF----PSRLGDPAEYAHLVQAIIENPFL  241 (248)
T ss_dssp             CHHHHT-CSS----SCSCBCHHHHHHHHHHHHHCTTC
T ss_pred             HHHHhc-CCC----CCCCcCHHHHHHHHHHHHhCCCC
Confidence            111111 111    01477899999999999976433

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.78  E-value=7.6e-19  Score=148.44  Aligned_cols=199  Identities=15%  Similarity=0.128  Sum_probs=136.7

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC-----cchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH-----KKDLSFLTNLPGASERLQIFNADLNDPESFDAA   75 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~   75 (327)
                      |...+|++|||||++.||.++++.|+++|++|++.+|+....     ...+..+....  ......+.+|+.|.++.+++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~   80 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEI--RRRGGKAVANYDSVEAGEKL   80 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHH--HHTTCEEEEECCCGGGHHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHH--hhcccccccccchHHHHHHH
Confidence            555678999999999999999999999999999998842211     11111111000  01334566788887666554


Q ss_pred             hc-------CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCC
Q 020334           76 IA-------GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGK  138 (327)
Q Consensus        76 ~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~  138 (327)
                      ++       ++|++|||||....      +.+++. ..+++|+.++..+.+++.    +.+ ..++|++||..... +  
T Consensus        81 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~-~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~-~--  155 (302)
T d1gz6a_          81 VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWD-IIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIY-G--  155 (302)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH-C--
T ss_pred             HHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHh-hhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcC-C--
Confidence            43       68999999997542      233454 889999999888777644    444 57999999977542 1  


Q ss_pred             CCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHh
Q 020334          139 DVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVL  215 (327)
Q Consensus       139 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~  215 (327)
                                         .+....|+.+|...+.+.+.++.++   ||++..+.|+.+-.+..     ..+..-.    
T Consensus       156 -------------------~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~-----~~~~~~~----  207 (302)
T d1gz6a_         156 -------------------NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTE-----TVMPEDL----  207 (302)
T ss_dssp             -------------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTG-----GGSCHHH----
T ss_pred             -------------------CCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchh-----hcCcHhh----
Confidence                               1224679999999999999998764   89999999986532211     1110000    


Q ss_pred             CCccccccccCCCeeeHHHHHHHHHHhhcC
Q 020334          216 GNREEYSILLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       216 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                            .     .++.++|+|.++++++..
T Consensus       208 ------~-----~~~~PedvA~~v~fL~S~  226 (302)
T d1gz6a_         208 ------V-----EALKPEYVAPLVLWLCHE  226 (302)
T ss_dssp             ------H-----HHSCGGGTHHHHHHHTST
T ss_pred             ------H-----hcCCHHHHHHHHHHHcCC
Confidence                  0     234568999999999864

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.78  E-value=2e-18  Score=143.32  Aligned_cols=206  Identities=16%  Similarity=0.059  Sum_probs=142.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHH---CCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc---
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLD---HGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA---   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   77 (327)
                      +|.++||||++.||.+++++|++   +|++|++.+| +.+....+ .++... ....++.++.+|++|+++++++++   
T Consensus         6 gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r-~~~~l~~~~~~l~~~-~~~~~~~~~~~Dvs~~~~v~~l~~~~~   83 (259)
T d1oaaa_           6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSAR-SESMLRQLKEELGAQ-QPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEES-CHHHHHHHHHHHHHH-CTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEEC-CHHHHHHHHHHHHhh-cCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            67889999999999999999986   6999999999 44333222 222211 112468889999999998877652   


Q ss_pred             --------CCCEEEEccCCCCC---------CCCchHHHHHHHHHhHHHHHHHHHHhc----C-CccEEEEeccceeeee
Q 020334           78 --------GCAGVIHVAAPIDI---------DGKETEEVMTQRAVNGTIGILKSCLKS----G-TVKRFVYTSSGSTVYF  135 (327)
Q Consensus        78 --------~~d~vih~a~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~~v~~SS~~v~~~  135 (327)
                              ..|++||+||....         +.+.+. ..+++|+.++..+.+++.+.    + ...++|++||......
T Consensus        84 ~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~-~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVN-NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHH-HHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HhhhhccCceEEEEecccccccCCCCccccCCHHHHH-HHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence                    35789999986431         112343 78999999999998877653    1 1458999999765420


Q ss_pred             cCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc-CCcEEEEecCceecCCCCC-----CCCchHHH
Q 020334          136 SGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH-GLDLVTLIPSFVVGPFICP-----KFAGSVRS  209 (327)
Q Consensus       136 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~R~~~v~G~~~~~-----~~~~~~~~  209 (327)
                                            .+....|+.+|...+.+.+.++.+. |+++..+.||.+-.+....     ..+.....
T Consensus       163 ----------------------~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~  220 (259)
T d1oaaa_         163 ----------------------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSK  220 (259)
T ss_dssp             ----------------------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHH
T ss_pred             ----------------------CccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHH
Confidence                                  1234679999999999999988664 8999999999987763110     00011111


Q ss_pred             HHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcC
Q 020334          210 TLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                      +.....     .     ..+..++|+|++++.+++.
T Consensus       221 ~~~~~~-----~-----~r~~~p~evA~~i~~ll~~  246 (259)
T d1oaaa_         221 LQKLKS-----D-----GALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             HHHHHH-----T-----TCSBCHHHHHHHHHHHHHH
T ss_pred             HHhcCC-----C-----CCCCCHHHHHHHHHHHhhh
Confidence            111101     1     1467899999999998865

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=3.9e-17  Score=135.50  Aligned_cols=220  Identities=15%  Similarity=0.073  Sum_probs=149.2

Q ss_pred             CCCeEEEeCCcc--hhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            4 QKGKVCVTGGTG--FIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         4 ~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      .+|++|||||+|  .||.++++.|+++|++|++.+| ++.......++...   ......+..|+.+..+....+.    
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQ-NDKLKGRVEEFAAQ---LGSDIVLQCDVAEDASIDTMFAELGK   79 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEES-STTTHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHhh---cCCcceeecccchHHHHHHHHHHhhh
Confidence            478999999999  7999999999999999999999 44444444433322   2466788899999877666553    


Q ss_pred             ---CCCEEEEccCCCCCCC----------CchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcc
Q 020334           78 ---GCAGVIHVAAPIDIDG----------KETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDML  143 (327)
Q Consensus        78 ---~~d~vih~a~~~~~~~----------~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~  143 (327)
                         ..|++||+|+......          .+........|+.+...+.+++...- +.+.++++||..... +       
T Consensus        80 ~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~-~-------  151 (258)
T d1qsga_          80 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-A-------  151 (258)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-B-------
T ss_pred             cccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhcc-C-------
Confidence               4699999997643111          11123567778888888888776642 245788888865331 0       


Q ss_pred             cCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccc
Q 020334          144 DETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREE  220 (327)
Q Consensus       144 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
                                    .+....|+.+|...+.+.+.++.++   |+++..++||.|..+........  ......... ..+
T Consensus       152 --------------~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~--~~~~~~~~~-~~p  214 (258)
T d1qsga_         152 --------------IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF--RKMLAHCEA-VTP  214 (258)
T ss_dssp             --------------CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTH--HHHHHHHHH-HST
T ss_pred             --------------CCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchh--hhHHHHHHh-CCC
Confidence                          1224579999999999999998876   79999999999988754321111  111111111 112


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      +.     .+..++|+|+++.+++....  ..| ++.++|.
T Consensus       215 l~-----R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG  249 (258)
T d1qsga_         215 IR-----RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG  249 (258)
T ss_dssp             TS-----SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCcCHHHHHHHHHHHhCchhcCccCceEEECcC
Confidence            22     47889999999999996532  344 4456543

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.75  E-value=2.4e-17  Score=134.70  Aligned_cols=189  Identities=13%  Similarity=0.136  Sum_probs=132.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-------hc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-------IA   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-------~~   77 (327)
                      +|+||||||+|.||.+++++|+++|++|+++++......             .....+..|..+.+....+       +.
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------------SASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------------cccceeecccCcHHHHHHHHHHHHHHhC
Confidence            689999999999999999999999999999998432211             1234445666555443322       22


Q ss_pred             --CCCEEEEccCCCC---CCC----CchHHHHHHHHHhHHHHHHHHHHhc-CCccEEEEeccceeeeecCCCCCcccCCC
Q 020334           78 --GCAGVIHVAAPID---IDG----KETEEVMTQRAVNGTIGILKSCLKS-GTVKRFVYTSSGSTVYFSGKDVDMLDETF  147 (327)
Q Consensus        78 --~~d~vih~a~~~~---~~~----~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~v~~~~~~~~~~~~E~~  147 (327)
                        ++|++||+||...   ...    +.+. ..+++|+.++..+.+++.+. .+..++|++||......            
T Consensus        69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~------------  135 (236)
T d1dhra_          69 DQKVDAILCVAGGWAGGNAKSKSLFKNCD-LMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG------------  135 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHH-HHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC------------
T ss_pred             CCCceEEEECCcccccccchhcCCHHHHH-HHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCC------------
Confidence              4899999998533   111    2233 67899999998888877653 12469999999765421            


Q ss_pred             CCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc-----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          148 WSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH-----GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       148 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                                .+....|+.||...+.+.+.++.+.     |+++..+.||.+..|..            +..... ..+.
T Consensus       136 ----------~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~------------~~~~~~-~~~~  192 (236)
T d1dhra_         136 ----------TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN------------RKSMPE-ADFS  192 (236)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH------------HHHSTT-SCGG
T ss_pred             ----------ccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcc------------hhhCcc-chhh
Confidence                      1224579999999999999998653     69999999999887631            111111 1111


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                           .++.++|+++.+.+++....
T Consensus       193 -----~~~~pe~va~~~~~l~s~~~  212 (236)
T d1dhra_         193 -----SWTPLEFLVETFHDWITGNK  212 (236)
T ss_dssp             -----GSEEHHHHHHHHHHHHTTTT
T ss_pred             -----cCCCHHHHHHHHHHHhCCCc
Confidence                 57889999999999987643

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.8e-17  Score=137.53  Aligned_cols=209  Identities=20%  Similarity=0.090  Sum_probs=136.4

Q ss_pred             CCeE-EEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCCCCc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            5 KGKV-CVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPEHK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         5 ~~~i-lVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      +|+| |||||++.||.+++++|++. |++|++.+| +.+.. .....+...   ..++.++.+|++|.++++++++    
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~Dvs~~~sv~~~~~~~~~   77 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTAR-DVTRGQAAVQQLQAE---GLSPRFHQLDIDDLQSIRALRDFLRK   77 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEES-SHHHHHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEEC-CHHHHHHHHHHHHhc---CCcEEEEEEecCCHHHHHHHHHHHHH
Confidence            4566 89999999999999999985 899999999 44332 223333332   3578999999999998876654    


Q ss_pred             ---CCCEEEEccCCCCCC--C----CchHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCccc---
Q 020334           78 ---GCAGVIHVAAPIDID--G----KETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLD---  144 (327)
Q Consensus        78 ---~~d~vih~a~~~~~~--~----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~---  144 (327)
                         ++|++||+||.....  .    +++ ...+++|+.++..+.+.+.+.= .-.++|++||........ ...++.   
T Consensus        78 ~~g~iDiLVnNAGi~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~-~~~~y~~~k  155 (275)
T d1wmaa1          78 EYGGLDVLVNNAGIAFKVADPTPFHIQA-EVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALK-SCSPELQQK  155 (275)
T ss_dssp             HHSSEEEEEECCCCCCCTTCCSCHHHHH-HHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHH-TSCHHHHHH
T ss_pred             hcCCcEEEEEcCCcCCCCCcccCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceecccc-ccchhhhhh
Confidence               689999999975421  1    123 2678999999999999887531 135899999975432110 000000   


Q ss_pred             --CCCCCCh---------------hHhhhcCCCchhhHhhhHHHHHHHHHHHHHc-------CCcEEEEecCceecCCCC
Q 020334          145 --ETFWSDE---------------DYIRKLDIWGKSYVLTKTLTERAALEFAEEH-------GLDLVTLIPSFVVGPFIC  200 (327)
Q Consensus       145 --E~~~~~~---------------~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~~~~~i~R~~~v~G~~~~  200 (327)
                        -......               ........+...|+.||.....+.+.+++++       ++++..+.||.|-.+...
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~  235 (275)
T d1wmaa1         156 FRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG  235 (275)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred             hcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCccc
Confidence              0000000               0000012334579999998877766555432       899999999998765322


Q ss_pred             CCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhc
Q 020334          201 PKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLE  244 (327)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  244 (327)
                      +.                         -...++|.|+.+++++.
T Consensus       236 ~~-------------------------~~~~pee~A~~~~~~a~  254 (275)
T d1wmaa1         236 PK-------------------------ATKSPEEGAETPVYLAL  254 (275)
T ss_dssp             TT-------------------------CSBCHHHHTHHHHHHHS
T ss_pred             Cc-------------------------ccCCHHHHHHHHHHHHc
Confidence            10                         12357899998888764

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.72  E-value=1.1e-16  Score=130.79  Aligned_cols=188  Identities=18%  Similarity=0.167  Sum_probs=127.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHH-------Hh-
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDA-------AI-   76 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-------~~-   76 (327)
                      .+|||||||+|.||.+++++|+++|++|++++|+..+..             .....+.+|..+.+....       .+ 
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------------DSNILVDGNKNWTEQEQSILEQTASSLQ   68 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-------------cccceeccccCchhHHHHHHHHHHHHhc
Confidence            468999999999999999999999999999999432211             123445577765543322       22 


Q ss_pred             -cCCCEEEEccCCCCC---CCC---chHHHHHHHHHhHHHHHHHHHHhcC-CccEEEEeccceeeeecCCCCCcccCCCC
Q 020334           77 -AGCAGVIHVAAPIDI---DGK---ETEEVMTQRAVNGTIGILKSCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFW  148 (327)
Q Consensus        77 -~~~d~vih~a~~~~~---~~~---~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~  148 (327)
                       .++|++|||||....   ...   +..+..+++|+.++..+.+.+.+.- +..++|++||......             
T Consensus        69 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~-------------  135 (235)
T d1ooea_          69 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP-------------  135 (235)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-------------
T ss_pred             CCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCC-------------
Confidence             258999999986331   111   1223568999999888877776541 1368999999765421             


Q ss_pred             CChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc-----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccccc
Q 020334          149 SDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH-----GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSI  223 (327)
Q Consensus       149 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
                               .+...+|+.+|...+.+.+.++.++     ++++..+.|+.+-.|.        .    +...... ... 
T Consensus       136 ---------~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~--------~----~~~~~~~-~~~-  192 (235)
T d1ooea_         136 ---------TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM--------N----RKWMPNA-DHS-  192 (235)
T ss_dssp             ---------CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH--------H----HHHSTTC-CGG-
T ss_pred             ---------cccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcc--------h----hhhCcCC-ccc-
Confidence                     1224679999999999999998653     6788889999775542        1    1111111 111 


Q ss_pred             ccCCCeeeHHHHHHHHHHhhcC
Q 020334          224 LLNISMVHIDDVARAHIFLLEY  245 (327)
Q Consensus       224 ~~~~~~i~v~D~a~~~~~~~~~  245 (327)
                          .++..+|+++.++..+..
T Consensus       193 ----~~~~~~~va~~~~~~l~~  210 (235)
T d1ooea_         193 ----SWTPLSFISEHLLKWTTE  210 (235)
T ss_dssp             ----GCBCHHHHHHHHHHHHHC
T ss_pred             ----cCCCHHHHHHHHHHHhcC
Confidence                578899999998765544

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.72  E-value=4e-16  Score=130.47  Aligned_cols=219  Identities=12%  Similarity=0.036  Sum_probs=139.1

Q ss_pred             CCCeEEEeCCcc--hhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            4 QKGKVCVTGGTG--FIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         4 ~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      .+|++|||||+|  .||.+++++|+++|++|++.+| +......+..+...   .....+...|+++.+++.++++    
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r-~~~~~~~~~~l~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYL-NESLEKRVRPIAQE---LNSPYVYELDVSKEEHFKSLYNSVKK   79 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEES-STTTHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHhh---CCceeEeeecccchhhHHHHHHHHHH
Confidence            478999999887  7999999999999999999999 44444444444332   2456778999999888776663    


Q ss_pred             ---CCCEEEEccCCCCC------CCCchHHHHHHHH---HhHHHHHHHHHHhcCCc-cEEEEeccceeeeecCCCCCccc
Q 020334           78 ---GCAGVIHVAAPIDI------DGKETEEVMTQRA---VNGTIGILKSCLKSGTV-KRFVYTSSGSTVYFSGKDVDMLD  144 (327)
Q Consensus        78 ---~~d~vih~a~~~~~------~~~~~~~~~~~~n---v~~~~~l~~~~~~~~~~-~~~v~~SS~~v~~~~~~~~~~~~  144 (327)
                         .+|++||+++....      ............+   ......+.....+.... ..++.+|+..... .        
T Consensus        80 ~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~-~--------  150 (274)
T d2pd4a1          80 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK-Y--------  150 (274)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-B--------
T ss_pred             HcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccc-c--------
Confidence               68999999986541      1112221222222   22334444444333222 3455555443321 0        


Q ss_pred             CCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc-hHHHHHHHHhCCccc
Q 020334          145 ETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAG-SVRSTLAMVLGNREE  220 (327)
Q Consensus       145 E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~  220 (327)
                                   ......|+.+|...+.+++.++.++   |+++..+.||.+..+........ .......  ..  .+
T Consensus       151 -------------~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~--~~--~p  213 (274)
T d2pd4a1         151 -------------MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNE--IN--AP  213 (274)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHH--HH--ST
T ss_pred             -------------cccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHh--hh--hh
Confidence                         1334679999999999998887764   89999999999988754322111 1111111  11  11


Q ss_pred             cccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          221 YSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       221 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      ..     .+..++|+|+++.+++....  ..| ++.+.|.
T Consensus       214 ~~-----r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG  248 (274)
T d2pd4a1         214 LR-----KNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG  248 (274)
T ss_dssp             TS-----SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cc-----CCcCHHHHHHHHHHHhChhhCCCcCceEEECCC
Confidence            11     57899999999999997643  334 5556554

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.71  E-value=1.6e-16  Score=130.40  Aligned_cols=206  Identities=22%  Similarity=0.179  Sum_probs=139.2

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc------CC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA------GC   79 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~   79 (327)
                      |++|||||++.||.+++++|+++|++|++.+| +.+.              .+...+++|+.+......+..      ..
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~-~~~~--------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   66 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDL-RREG--------------EDLIYVEGDVTREEDVRRAVARAQEEAPL   66 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEES-SCCS--------------SSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-Cccc--------------ccceEeeccccchhhhHHHHHhhhccccc
Confidence            78999999999999999999999999999999 3221              245778899998876655443      34


Q ss_pred             CEEEEccCCCC---------CCCCchHHHHHHHHHhHHHHHHHHHHhc---------CCccEEEEeccceeeeecCCCCC
Q 020334           80 AGVIHVAAPID---------IDGKETEEVMTQRAVNGTIGILKSCLKS---------GTVKRFVYTSSGSTVYFSGKDVD  141 (327)
Q Consensus        80 d~vih~a~~~~---------~~~~~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~~~v~~SS~~v~~~~~~~~~  141 (327)
                      +.++++++...         ....+...+.++.|+.+...+...+...         .+..++|++||...+..      
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~------  140 (241)
T d1uaya_          67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG------  140 (241)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC------
T ss_pred             cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC------
Confidence            55555554322         0111223367899998888777765432         12469999999765421      


Q ss_pred             cccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCc
Q 020334          142 MLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNR  218 (327)
Q Consensus       142 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~  218 (327)
                                      .+....|+.+|...+.+.+.++.++   |+++..+.||.+-.+........    .........
T Consensus       141 ----------------~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~----~~~~~~~~~  200 (241)
T d1uaya_         141 ----------------QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEK----AKASLAAQV  200 (241)
T ss_dssp             ----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHH----HHHHHHTTC
T ss_pred             ----------------CCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhh----HHHHHHhcC
Confidence                            1235679999999999999998764   89999999999977643221111    111111111


Q ss_pred             cccccccCCCeeeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 020334          219 EEYSILLNISMVHIDDVARAHIFLLEYPDAKG-RYICSSA  257 (327)
Q Consensus       219 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~  257 (327)
                      ....     .+..++|+|++++++++.....| +..+.|.
T Consensus       201 ~~~~-----R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG  235 (241)
T d1uaya_         201 PFPP-----RLGRPEEYAALVLHILENPMLNGEVVRLDGA  235 (241)
T ss_dssp             CSSC-----SCCCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             CCCC-----CCcCHHHHHHHHHHHHhCCCCCCCEEEECCc
Confidence            1111     46789999999999998654445 4456443

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.5e-16  Score=131.13  Aligned_cols=199  Identities=16%  Similarity=0.068  Sum_probs=136.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIA-----   77 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   77 (327)
                      .+|++||||||+.||.+++++|+++|++|++++| +.+..... .++...  ....+..+..|+.+.+.....+.     
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r-~~~~l~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~   89 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTAR-SKETLQKVVSHCLEL--GAASAHYIAGTMEDMTFAEQFVAQAGKL   89 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH--TCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHhhh--hcccchhhhhhhhhHHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999 44332222 111111  12467788899998876665443     


Q ss_pred             --CCCEEEEccCCCCC------CCCchHHHHHHHHHhHHHHHHHHHHhc---CCccEEEEeccceeeeecCCCCCcccCC
Q 020334           78 --GCAGVIHVAAPIDI------DGKETEEVMTQRAVNGTIGILKSCLKS---GTVKRFVYTSSGSTVYFSGKDVDMLDET  146 (327)
Q Consensus        78 --~~d~vih~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v~~~~~~~~~~~~E~  146 (327)
                        ..|+++++|+....      +.+++ ...+++|+.++..+.+.+...   + ..++|++||...+..           
T Consensus        90 ~g~~~~li~nag~~~~~~~~~~~~~~~-~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~-----------  156 (269)
T d1xu9a_          90 MGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVA-----------  156 (269)
T ss_dssp             HTSCSEEEECCCCCCCCCCCCSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSC-----------
T ss_pred             hCCccccccccccccccccccCCHHHh-hhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCC-----------
Confidence              57999999986541      11233 377899998887776665421   1 268999999765421           


Q ss_pred             CCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc-----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCcccc
Q 020334          147 FWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH-----GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEY  221 (327)
Q Consensus       147 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
                                 .+....|+.||...+.+.+.++.++     ++++..+.||.|-.+.        .   .....+.  ..
T Consensus       157 -----------~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~--------~---~~~~~~~--~~  212 (269)
T d1xu9a_         157 -----------YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET--------A---MKAVSGI--VH  212 (269)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH--------H---HHHSCGG--GG
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcH--------H---HHhccCC--cc
Confidence                       1234689999999999988887653     5888999999875541        0   1111111  11


Q ss_pred             ccccCCCeeeHHHHHHHHHHhhcCCC
Q 020334          222 SILLNISMVHIDDVARAHIFLLEYPD  247 (327)
Q Consensus       222 ~~~~~~~~i~v~D~a~~~~~~~~~~~  247 (327)
                           ......+++|+.++..+....
T Consensus       213 -----~~~~~~e~~a~~i~~~~~~~~  233 (269)
T d1xu9a_         213 -----MQAAPKEECALEIIKGGALRQ  233 (269)
T ss_dssp             -----GGCBCHHHHHHHHHHHHHTTC
T ss_pred             -----ccCCCHHHHHHHHHHHhhcCC
Confidence                 135568899999988776543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.67  E-value=7.3e-16  Score=128.43  Aligned_cols=221  Identities=11%  Similarity=-0.004  Sum_probs=136.3

Q ss_pred             CCCeEEEeCCcc--hhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc----
Q 020334            4 QKGKVCVTGGTG--FIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA----   77 (327)
Q Consensus         4 ~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   77 (327)
                      .+|++|||||+|  .||.+++++|+++|++|++.+|+..+...   .+.+..  ..+...+++|+.+.+++.++++    
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~--~~~~~~~~~dv~~~~~~~~~~~~v~~   79 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRL--PAKAPLLELDVQNEEHLASLAGRVTE   79 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTS--SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHc--CCceeeEeeecccccccccccchhhh
Confidence            378999999654  69999999999999999999983322212   222211  2467888999999876655432    


Q ss_pred             ------CCCEEEEccCCCCC---C--------CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeeecCCCC
Q 020334           78 ------GCAGVIHVAAPIDI---D--------GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYFSGKDV  140 (327)
Q Consensus        78 ------~~d~vih~a~~~~~---~--------~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~~~~~~  140 (327)
                            .+|+++|+++....   .        ...+. ..+..|+...................+.++|..... .    
T Consensus        80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~-~----  153 (268)
T d2h7ma1          80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVS-KGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR-A----  153 (268)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS-C----
T ss_pred             ccccCCCcceeeecccccCccccccccccccchhhhh-hhhhhhhhHHHHHHHHHhhhcccccccccccccccc-c----
Confidence                  46999999986431   1        11222 446666777776766666543233444444433221 0    


Q ss_pred             CcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCC----CCCchH----HH
Q 020334          141 DMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICP----KFAGSV----RS  209 (327)
Q Consensus       141 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~----~~~~~~----~~  209 (327)
                                       .+....|+.+|...+.+++.++.++   |+++..|.||.+-.+....    ......    ..
T Consensus       154 -----------------~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~  216 (268)
T d2h7ma1         154 -----------------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQL  216 (268)
T ss_dssp             -----------------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHH
T ss_pred             -----------------CcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHH
Confidence                             1224579999999999999988765   7999999999887652110    001100    01


Q ss_pred             HHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          210 TLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      ....... ..++    .+.+..++|+|+++.+++....  ..| ++.+.|.
T Consensus       217 ~~~~~~~-~~pl----~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG  262 (268)
T d2h7ma1         217 LEEGWDQ-RAPI----GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG  262 (268)
T ss_dssp             HHHHHHH-HCTT----CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred             HHHHHHh-cCCC----CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence            1111110 0111    1246789999999999996533  234 4556544

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.67  E-value=2.3e-15  Score=126.49  Aligned_cols=220  Identities=15%  Similarity=0.044  Sum_probs=137.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhh-hhhCCC---------------CCCCCeEEEeCCCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLS-FLTNLP---------------GASERLQIFNADLND   68 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~---------------~~~~~~~~~~~D~~d   68 (327)
                      ++.+|||||++.||.++++.|+++|++|++.+|++.+....+. .+....               .....+....+|+++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            5678999999999999999999999999998884433322221 111110               001123445567888


Q ss_pred             hhHHHHHhc-------CCCEEEEccCCCCCCC------Cch-------------HHHHHHHHHhHHHHHHHHHHhc----
Q 020334           69 PESFDAAIA-------GCAGVIHVAAPIDIDG------KET-------------EEVMTQRAVNGTIGILKSCLKS----  118 (327)
Q Consensus        69 ~~~~~~~~~-------~~d~vih~a~~~~~~~------~~~-------------~~~~~~~nv~~~~~l~~~~~~~----  118 (327)
                      .++++++++       ++|++||+||......      ..+             ....+.+|+.++..+.+++.+.    
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            887777653       6899999998654211      111             1135788888888887765421    


Q ss_pred             -----CCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEe
Q 020334          119 -----GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLI  190 (327)
Q Consensus       119 -----~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R  190 (327)
                           +....+++++|..... +                     .+....|+.+|...+.+.+.++.++   |+++..+.
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~-~---------------------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~  219 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQ-P---------------------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVG  219 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTS-C---------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             HHHhcCCCCcccccccccccC-C---------------------ccceeeeccccccchhhhHHHHHHhCCccccccccc
Confidence                 2245788887765331 0                     1234679999999999999988765   89999999


Q ss_pred             cCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          191 PSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       191 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      ||.+-....   .+.   ..............     .+..++|+|+++++++....  ..| .+.+.|+
T Consensus       220 PG~t~~~~~---~~~---~~~~~~~~~~pl~~-----R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG  278 (284)
T d1e7wa_         220 PGLSVLVDD---MPP---AVWEGHRSKVPLYQ-----RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG  278 (284)
T ss_dssp             ESSBCCGGG---SCH---HHHHHHHTTCTTTT-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccccccccc---CCH---HHHHHHHhcCCCCC-----CCCCHHHHHHHHHHHhCchhcCccCCeEEECcC
Confidence            996432211   111   11222222211111     47789999999999997543  234 4556543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.62  E-value=9.7e-15  Score=123.35  Aligned_cols=226  Identities=12%  Similarity=0.046  Sum_probs=133.3

Q ss_pred             CCCCCCeEEEeCCcc--hhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhC--------CCC-CCC---CeEEEeCCC
Q 020334            1 MEEQKGKVCVTGGTG--FIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTN--------LPG-ASE---RLQIFNADL   66 (327)
Q Consensus         1 m~~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--------~~~-~~~---~~~~~~~D~   66 (327)
                      |.+.+|++|||||+|  .||.++++.|+++|++|++.+| ++...........        ... ...   ++..+..++
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTW-VPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEE-HHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeC-chhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence            344578999999987  8999999999999999999988 3211100000000        000 000   122222222


Q ss_pred             ---------------------CChhHH----HHHhcCCCEEEEccCCCC--------CCCCchHHHHHHHHHhHHHHHHH
Q 020334           67 ---------------------NDPESF----DAAIAGCAGVIHVAAPID--------IDGKETEEVMTQRAVNGTIGILK  113 (327)
Q Consensus        67 ---------------------~d~~~~----~~~~~~~d~vih~a~~~~--------~~~~~~~~~~~~~nv~~~~~l~~  113 (327)
                                           .+.+.+    .+.+.++|++||+||...        .+.+++. ..+++|+.+...+.+
T Consensus        83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~-~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYL-AAISASSYSFVSLLS  161 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHH-HHHHHHTHHHHHHHH
T ss_pred             cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhccccc-ccccchhhhhhhhhh
Confidence                                 122222    222347899999998632        1122344 789999999999999


Q ss_pred             HHHhcC-CccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHH----HcCCcEEE
Q 020334          114 SCLKSG-TVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAE----EHGLDLVT  188 (327)
Q Consensus       114 ~~~~~~-~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~----~~~~~~~i  188 (327)
                      ++.... ...+.+.+++.......                     ......|+.+|...+.+.+.++.    ++|+++..
T Consensus       162 ~~~~~~~~~g~~~~~~~~~~~~~~---------------------~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~  220 (297)
T d1d7oa_         162 HFLPIMNPGGASISLTYIASERII---------------------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNT  220 (297)
T ss_dssp             HHGGGEEEEEEEEEEECGGGTSCC---------------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred             HHHHHhhcCCcceeeeehhhcccc---------------------cccccceecccccccccccccchhccccceEEecc
Confidence            887653 12345555554322101                     12244699999877777665543    35899999


Q ss_pred             EecCceecCCCCCCCCchHHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          189 LIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       189 ~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      +.||.+..+.....  ............ ..++.     .+..++|+|+++++++....  ..| ++.+.|.
T Consensus       221 I~PG~i~T~~~~~~--~~~~~~~~~~~~-~~Plg-----R~~~peevA~~v~fL~S~~a~~itGq~i~vDGG  284 (297)
T d1d7oa_         221 ISAGPLGSRAAKAI--GFIDTMIEYSYN-NAPIQ-----KTLTADEVGNAAAFLVSPLASAITGATIYVDNG  284 (297)
T ss_dssp             EEECCCBCCCSSCC--SHHHHHHHHHHH-HSSSC-----CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cccccccchhhhhc--cCCHHHHHHHHh-CCCCC-----CCCCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence            99999988764321  112222222111 12222     57889999999999996532  344 4456544

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.60  E-value=1.9e-14  Score=119.59  Aligned_cols=217  Identities=13%  Similarity=0.097  Sum_probs=131.8

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCCh----hHHHHH-----
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDP----ESFDAA-----   75 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~----~~~~~~-----   75 (327)
                      +..|||||++.||.+++++|+++|++|++.+|+....... ..++....  ......+..|..+.    +.+.++     
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR--AGSAVLCKGDLSLSSSLLDCCEDIIDCSF   79 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc--CCceEEEecccccchhHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999943322222 22222211  23566666666542    223332     


Q ss_pred             --hcCCCEEEEccCCCCCCCC----------------chHHHHHHHHHhHHHHHHHHHHhcC--------CccEEEEecc
Q 020334           76 --IAGCAGVIHVAAPIDIDGK----------------ETEEVMTQRAVNGTIGILKSCLKSG--------TVKRFVYTSS  129 (327)
Q Consensus        76 --~~~~d~vih~a~~~~~~~~----------------~~~~~~~~~nv~~~~~l~~~~~~~~--------~~~~~v~~SS  129 (327)
                        +.++|++||+||.......                ......+..|+..............        ....++.+|+
T Consensus        80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (266)
T d1mxha_          80 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  159 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhh
Confidence              2368999999986542110                1111345556555555544444321        1235555555


Q ss_pred             ceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCch
Q 020334          130 GSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGS  206 (327)
Q Consensus       130 ~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~  206 (327)
                      ......                      .+....|+.||...+.+.+.++.++   |+++..+.||.+..+...   +..
T Consensus       160 ~~~~~~----------------------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~---~~~  214 (266)
T d1mxha_         160 AMTDLP----------------------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM---PQE  214 (266)
T ss_dssp             GGGGSC----------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS---CHH
T ss_pred             cccccc----------------------CcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC---CHH
Confidence            443210                      1235679999999999999988764   899999999998766422   111


Q ss_pred             HHHHHHHHhCCccccccccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          207 VRSTLAMVLGNREEYSILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                      .   ....... .+++    +.+..++|+|+++++++....  ..| ++.+.|.
T Consensus       215 ~---~~~~~~~-~pl~----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG  260 (266)
T d1mxha_         215 T---QEEYRRK-VPLG----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG  260 (266)
T ss_dssp             H---HHHHHTT-CTTT----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             H---HHHHHhc-CCCC----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECcc
Confidence            1   1111211 1211    235689999999999997643  344 5566553

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.57  E-value=1.2e-14  Score=120.17  Aligned_cols=222  Identities=17%  Similarity=0.120  Sum_probs=123.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHh--------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAI--------   76 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--------   76 (327)
                      ||.||||||++.||.+++++|+++|++|++++|+..+                    ...|+.+.+......        
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~--------------------~~~d~~~~~~~~~~~~~~~~~~~   60 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE--------------------VIADLSTAEGRKQAIADVLAKCS   60 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS--------------------EECCTTSHHHHHHHHHHHHTTCT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH--------------------HHHHhcCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999993321                    125666655443322        


Q ss_pred             cCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHH----hcCCccEEEEeccceeeeecCCCCC-cccCCCCCCh
Q 020334           77 AGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCL----KSGTVKRFVYTSSGSTVYFSGKDVD-MLDETFWSDE  151 (327)
Q Consensus        77 ~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v~~~~~~~~~-~~~E~~~~~~  151 (327)
                      ..+|+++++|+..... .... .....|..+...+.+...    +.. ......+++............ ...... ...
T Consensus        61 ~~id~lv~~Ag~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~  136 (257)
T d1fjha_          61 KGMDGLVLCAGLGPQT-KVLG-NVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEA-GEE  136 (257)
T ss_dssp             TCCSEEEECCCCCTTC-SSHH-HHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHH-TCH
T ss_pred             CCCcEEEEcCCCCCcH-HHHH-HHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhhhhhhhccC-CcE
Confidence            2489999999864422 2333 667778777766665443    323 345555554332210000000 000000 000


Q ss_pred             hH----hhh--cCCCchhhHhhhHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhCCccccc
Q 020334          152 DY----IRK--LDIWGKSYVLTKTLTERAALEFAEEH---GLDLVTLIPSFVVGPFICPKFAGSVRSTLAMVLGNREEYS  222 (327)
Q Consensus       152 ~~----~~~--~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (327)
                      -.    ...  ...+..+|+.+|...+.+.+.++.++   ||++..+.||.+-.|.........  ...........+..
T Consensus       137 ~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~--~~~~~~~~~~~Plg  214 (257)
T d1fjha_         137 AKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP--RYGESIAKFVPPMG  214 (257)
T ss_dssp             HHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CCCSTT
T ss_pred             EEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCH--HHHHHHHhcCCCCC
Confidence            00    000  01123469999999999999887654   899999999999776432211100  00111111111222


Q ss_pred             cccCCCeeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 020334          223 ILLNISMVHIDDVARAHIFLLEYPD--AKG-RYICSSA  257 (327)
Q Consensus       223 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  257 (327)
                           .+..++|+|+++.+++....  ..| ...++|.
T Consensus       215 -----R~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         215 -----RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             -----SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -----CCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence                 57789999999999996543  334 4456554

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.52  E-value=7.6e-14  Score=119.25  Aligned_cols=169  Identities=9%  Similarity=0.024  Sum_probs=108.0

Q ss_pred             CCeEEEeC--CcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhh----------CCCCCCCCeEEEeC--------
Q 020334            5 KGKVCVTG--GTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLT----------NLPGASERLQIFNA--------   64 (327)
Q Consensus         5 ~~~ilVtG--atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~~~~~~~--------   64 (327)
                      .|..||||  ++..||.++++.|+++|++|++..+ ............          ..............        
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIW-PPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeC-chhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            57899999  5579999999999999999998877 321111100000          00000011122222        


Q ss_pred             ------------CCCChhHHHHH-------hcCCCEEEEccCCCCC--------CCCchHHHHHHHHHhHHHHHHHHHHh
Q 020334           65 ------------DLNDPESFDAA-------IAGCAGVIHVAAPIDI--------DGKETEEVMTQRAVNGTIGILKSCLK  117 (327)
Q Consensus        65 ------------D~~d~~~~~~~-------~~~~d~vih~a~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~  117 (327)
                                  |+.+.+.++++       +.++|++||+||....        +.+++. ..+++|+.+...+++++.+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~-~~~~vn~~~~~~~~k~~~~  159 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYL-DALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhh-hhcccchhHHHHHHHHHHh
Confidence                        34444333333       3478999999985431        123344 7889999998888888776


Q ss_pred             c-CCccEEEEeccceeeeecCCCCCcccCCCCCChhHhhhcCCCchhhHhhhHHHHHHHHHHHHH----cCCcEEEEecC
Q 020334          118 S-GTVKRFVYTSSGSTVYFSGKDVDMLDETFWSDEDYIRKLDIWGKSYVLTKTLTERAALEFAEE----HGLDLVTLIPS  192 (327)
Q Consensus       118 ~-~~~~~~v~~SS~~v~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~i~R~~  192 (327)
                      . ....++|.+||.......                     +.+...|+.+|...+.+.+.++.+    +||++..|.||
T Consensus       160 ~m~~~GsIv~iss~~~~~~~---------------------p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG  218 (329)
T d1uh5a_         160 IMKPQSSIISLTYHASQKVV---------------------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAG  218 (329)
T ss_dssp             GEEEEEEEEEEECGGGTSCC---------------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             hcccccccccceeehhcccc---------------------cccchhhhhhhccccccchhhHHHHhcccCcEEEEEecC
Confidence            4 124689999886543100                     122346999999998888887643    58999999999


Q ss_pred             ceec
Q 020334          193 FVVG  196 (327)
Q Consensus       193 ~v~G  196 (327)
                      .|-.
T Consensus       219 ~i~T  222 (329)
T d1uh5a_         219 PLKS  222 (329)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            8755

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.23  E-value=3.6e-12  Score=99.89  Aligned_cols=80  Identities=21%  Similarity=0.182  Sum_probs=65.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      .+|+|+||||+|.||..+++.|+++|++|++++| +.++...+ ..+...    .++....+|+.|.+.+++++.++|+|
T Consensus        22 ~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~iDil   96 (191)
T d1luaa1          22 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGR-KLDKAQAAADSVNKR----FKVNVTAAETADDASRAEAVKGAHFV   96 (191)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHHH----HTCCCEEEECCSHHHHHHHTTTCSEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhhccchhhccc-chHHHHHHHHHHHhc----cchhhhhhhcccHHHHHHHhcCcCee
Confidence            4789999999999999999999999999999999 44333222 222211    34567889999999999999999999


Q ss_pred             EEccCC
Q 020334           83 IHVAAP   88 (327)
Q Consensus        83 ih~a~~   88 (327)
                      ||+||.
T Consensus        97 in~Ag~  102 (191)
T d1luaa1          97 FTAGAI  102 (191)
T ss_dssp             EECCCT
T ss_pred             eecCcc
Confidence            999985

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.69  E-value=7.1e-08  Score=70.74  Aligned_cols=114  Identities=18%  Similarity=0.187  Sum_probs=77.4

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      ||.|+||+|.+|++++..|+.+|  .++..++. +...... ..+..... ......+   + ...+..+.++++|+||.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi-~~~~~~a-~Dl~~~~~-~~~~~~~---~-~~~~~~~~~~~aDivVi   74 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDI-AHTPGVA-ADLSHIET-RATVKGY---L-GPEQLPDCLKGCDVVVI   74 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEES-SSHHHHH-HHHTTSSS-SCEEEEE---E-SGGGHHHHHTTCSEEEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEec-cccchhh-HHHhhhhh-hcCCCeE---E-cCCChHHHhCCCCEEEE
Confidence            79999999999999999999887  36888887 4322211 12221100 0111111   1 23455677889999999


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      +||.......+.. +.++.|+...+.+++.++++++-..++.+|
T Consensus        75 tag~~~~~g~sR~-~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          75 PAGVPRKPGMTRD-DLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             CCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCcCCCCCCCcc-hHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            9996544444444 789999999999999999998445555555

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.65  E-value=4.6e-08  Score=71.99  Aligned_cols=114  Identities=17%  Similarity=0.187  Sum_probs=71.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      ++||.|+|+ |++|+.++..|+.+|  .+|..+++ +...... ...+..............+|..       .+.++|+
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~-~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~-------~~~~adi   75 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDV-VKDRTKGDALDLEDAQAFTAPKKIYSGEYS-------DCKDADL   75 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHGGGGGSCCCEEEECCGG-------GGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeec-ccchhHHHHHHHhccccccCCceEeeccHH-------HhccccE
Confidence            578999995 999999999999887  68999998 4322211 1111110000123455556542       3568999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      ||.+|+.......... +.+..|+...+.+++.+.+.++...++.+|
T Consensus        76 vvitag~~~~~g~~r~-~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          76 VVITAGAPQKPGESRL-DLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             EEECCCC-----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEecccccCCCCCHH-HHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            9999986554333444 778999999999999999988444444444

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.57  E-value=6.6e-07  Score=65.32  Aligned_cols=114  Identities=11%  Similarity=0.126  Sum_probs=72.4

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      +||.|+|+ |.+|+.++-.|+.++  .++..++++..........+.+............+|.       +.+.++|+|+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~-------~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDY-------SDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CG-------GGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcH-------HHhCCCceEE
Confidence            57999997 999999999999886  4899999833322222222322111123333333332       2366899999


Q ss_pred             EccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           84 HVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        84 h~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      -+||.......... +.+..|+...+.+++.+.++++...++.+|
T Consensus        74 itag~~~~~~~~r~-~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          74 VTAGANRKPGETRL-DLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             ECCCC------CHH-HHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EecccccCcCcchh-HHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            99986554444444 889999999999999999987444555554

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.56  E-value=6.4e-07  Score=65.51  Aligned_cols=115  Identities=14%  Similarity=0.066  Sum_probs=75.2

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCc--c-hhhhhhC-CCCCCCCeEEEeCCCCChhHHHHHhcCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHK--K-DLSFLTN-LPGASERLQIFNADLNDPESFDAAIAGC   79 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~-~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~~~   79 (327)
                      |||.|+||+|.+|++++..|+.+|  .++..+++ ++...  . ....+.+ ......+++....--.|.    +.++++
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~-~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~a   75 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGR-EHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDES   75 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC-GGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccc-hhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccc
Confidence            579999999999999999999888  58998988 33211  1 1111211 001112333322111122    246689


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEe
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYT  127 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~  127 (327)
                      |+||-+||.......+.. +.+..|....+.+++.+.+.+ .+.++.+
T Consensus        76 DvVVitAG~~~~~g~sR~-dl~~~Na~iv~~i~~~i~~~~-~~~iivV  121 (145)
T d1hyea1          76 DVVIITSGVPRKEGMSRM-DLAKTNAKIVGKYAKKIAEIC-DTKIFVI  121 (145)
T ss_dssp             SEEEECCSCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHC-CCEEEEC
T ss_pred             eEEEEecccccCCCCChh-hhhhhhHHHHHHHHHHHhccC-CCeEEEE
Confidence            999999997554444444 889999999999999999987 4455444

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.53  E-value=1.3e-06  Score=63.91  Aligned_cols=116  Identities=17%  Similarity=0.135  Sum_probs=76.4

Q ss_pred             CeEEEeCCcchhHHHHHHHHHH-C--CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLD-H--GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      |||.|+|++|.+|++++-.|.. .  ..++..++. .+........+.+... ......+ ..-.+   . +.++++|+|
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~-~~~~~g~a~Dl~h~~~-~~~~~~~-~~~~~---~-~~~~~aDvv   73 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDI-APVTPGVAVDLSHIPT-AVKIKGF-SGEDA---T-PALEGADVV   73 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECS-STTHHHHHHHHHTSCS-SCEEEEE-CSSCC---H-HHHTTCSEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecc-cccchhHHHHHHCCcc-ccCCcEE-EcCCC---c-cccCCCCEE
Confidence            5799999999999999988764 3  478888887 4332222222332211 1122222 22222   2 357789999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      |.+||.......+.. +.+..|....+.+.+.+.+.++...++.+|.
T Consensus        74 vitaG~~~k~g~~R~-dl~~~N~~i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          74 LISAGVRRKPGMDRS-DLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             EECCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             EECCCccCCCCcchh-hHHHHHHHHHHHHHHHHHhhCCCcEEEEccC
Confidence            999997554444444 7899999999999999999874455666653

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.52  E-value=1.5e-07  Score=68.20  Aligned_cols=72  Identities=21%  Similarity=0.162  Sum_probs=57.8

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVIH   84 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vih   84 (327)
                      |+|+|.|+ |.+|+++++.|.+.|++|+++++ +++....+...       .++..+.||.+|++.+.++ ++++|.++-
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~-d~~~~~~~~~~-------~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~   71 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDI-DKDICKKASAE-------IDALVINGDCTKIKTLEDAGIEDADMYIA   71 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHH-------CSSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecC-Chhhhhhhhhh-------hhhhhccCcccchhhhhhcChhhhhhhcc
Confidence            67999997 99999999999999999999999 55443333211       2568899999999999876 568898886


Q ss_pred             cc
Q 020334           85 VA   86 (327)
Q Consensus        85 ~a   86 (327)
                      +.
T Consensus        72 ~t   73 (132)
T d1lssa_          72 VT   73 (132)
T ss_dssp             CC
T ss_pred             cC
Confidence            53

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.45  E-value=9.3e-07  Score=64.30  Aligned_cols=114  Identities=16%  Similarity=0.021  Sum_probs=75.9

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCC-Cc-chhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPE-HK-KDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~-~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ||.|+||+|.+|++++..|+.++.  ++..+++.... .. .....+.+........+...+|..       .+.++|+|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~-------~~~~aDiV   74 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE-------DTAGSDVV   74 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG-------GGTTCSEE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH-------HhhhcCEE
Confidence            799999999999999999998874  78888762111 11 111122110001234444445542       25689999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      |-+||.......+.. +.++.|..-.+.+.+.+++.++...++.+|
T Consensus        75 vitaG~~~~~g~~R~-dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          75 VITAGIPRQPGQTRI-DLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             EECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEecccccccCCchh-hHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            999986554444444 889999999999999999987444555554

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.38  E-value=1.7e-06  Score=63.62  Aligned_cols=114  Identities=18%  Similarity=0.238  Sum_probs=76.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCc-chhhhhhCC-CCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHK-KDLSFLTNL-PGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      .+||.|+|| |++|++++..|+.+|  .++..+++ +++.. .....+.+. ......+....+|.       +.+.++|
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di-~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daD   76 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDA-NESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDAD   76 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEee-ccccccchhccHhhCccccCCCeEEEECCH-------HHhccce
Confidence            468999997 999999999999876  47988988 43221 111112111 11112344444544       2366899


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      +||.+|+.......... +.+..|+...+.+++.+.++++-..++.+|
T Consensus        77 vvvitag~~~~~~~~R~-dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          77 LVVICAGANQKPGETRL-DLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             EEEECCSCCCCTTTCSG-GGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             eEEEecccccccCcchh-HHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            99999987554444444 778999999999999999987555666655

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.36  E-value=2.9e-07  Score=68.29  Aligned_cols=120  Identities=17%  Similarity=0.107  Sum_probs=74.9

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchh-hhhhCCCC-CCCCeEEEeCCCCChhHHHHHhc
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDL-SFLTNLPG-ASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~-~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      |...++||.|+|+ |.+|+.++..|+..+ .++..++. ++...... ..+.+... ........ +    ....++.++
T Consensus         3 ~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~-~~~~~~g~a~Dl~~~~~~~~~~~~~~-~----~~~~~~~~~   75 (154)
T d1pzga1           3 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDV-VKGMPEGKALDLSHVTSVVDTNVSVR-A----EYSYEAALT   75 (154)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECS-SSSHHHHHHHHHHHHHHHTTCCCCEE-E----ECSHHHHHT
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEe-ccccchhHHHHHhhhccccCCeeEEe-c----cCchhhhhc
Confidence            4445689999997 999999998888777 47888887 44322211 11111000 00011111 1    112345678


Q ss_pred             CCCEEEEccCCCCCCCC-----chHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           78 GCAGVIHVAAPIDIDGK-----ETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        78 ~~d~vih~a~~~~~~~~-----~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      ++|+|+-+++......+     ... +.+..|+...+.+++.+.+.++-..++.+|
T Consensus        76 ~adiVvitag~~~~~g~~~~~~tR~-~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          76 GADCVIVTAGLTKVPGKPDSEWSRN-DLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             TCSEEEECCSCSSCTTCCGGGCCGG-GGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCCeEEEecccccCCCCCCcccchh-hhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            89999999986542221     333 778999999999999999988444555444

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.34  E-value=1.3e-06  Score=63.69  Aligned_cols=113  Identities=19%  Similarity=0.134  Sum_probs=74.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchh-hhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDL-SFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      |||.|+|+ |.+|++++..|+.++  .++..+++ ++...... ..+..............+|.   +    .++++|+|
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di-~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~----~~~~adiv   71 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDV-DKKRAEGDALDLIHGTPFTRRANIYAGDY---A----DLKGSDVV   71 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHHHGGGSCCCEEEECCG---G----GGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEec-ccccccchhccccccccccccccccCCcH---H----HhcCCCEE
Confidence            57999996 999999999888776  57888888 43222111 11111000012344444443   2    36689999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      |-+|+.......... +.+..|..-.+.+++.+.+.++-..++.+|
T Consensus        72 vitag~~~~~g~~r~-dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          72 IVAAGVPQKPGETRL-QLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             EECCCCCCCSSCCHH-HHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEecccccCCCcchh-hhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            999987554444444 888999999999999999988444555444

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.28  E-value=2.5e-06  Score=64.98  Aligned_cols=75  Identities=29%  Similarity=0.316  Sum_probs=56.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      .|+|+|.|| |++|+++++.|.++|++|++++| +......+.   +.   .........+..+.......+...|.++.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr-~~~~a~~l~---~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~i~   73 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACR-TLESAKKLS---AG---VQHSTPISLDVNDDAALDAEVAKHDLVIS   73 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEES-CHHHHHHHH---TT---CTTEEEEECCTTCHHHHHHHHTTSSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEEC-ChHHHHHHH---hc---ccccccccccccchhhhHhhhhccceeEe
Confidence            589999997 99999999999999999999999 544333332   21   13455556777777777888888888886


Q ss_pred             ccC
Q 020334           85 VAA   87 (327)
Q Consensus        85 ~a~   87 (327)
                      +..
T Consensus        74 ~~~   76 (182)
T d1e5qa1          74 LIP   76 (182)
T ss_dssp             CSC
T ss_pred             ecc
Confidence            653

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=98.27  E-value=3.6e-06  Score=62.34  Aligned_cols=115  Identities=17%  Similarity=0.085  Sum_probs=77.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEcCCCCCc-chhhhhhCC-CCCCCCeEEEeCCCCChhHHHHHhcCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVRSDPEHK-KDLSFLTNL-PGASERLQIFNADLNDPESFDAAIAGC   79 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~-~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~   79 (327)
                      +.+||.|+|+ |.+|+.++..|+.+|.  ++..+++ +++.. .....+.+. ...........+|..       .+.++
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~-~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~-------~~~~a   89 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDV-LEDKLKGEMMDLQHGSLFLQTPKIVADKDYS-------VTANS   89 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-CHHHHHHHHHHHHHTGGGCCCSEEEECSSGG-------GGTTC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEe-ccchhHHHHHHHhccccccCCCeEEeccchh-------hcccc
Confidence            4579999996 9999999999999984  7888888 43222 111112111 000112222234432       26689


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      |+||.+||......++.. +.++.|+...+.++..+++.++..-++.+|
T Consensus        90 diVVitAg~~~~~g~tR~-~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          90 KIVVVTAGVRQQEGESRL-NLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             SEEEECCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cEEEEecCCccccCcchH-HHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            999999997654445554 788999999999999999987444566555

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=98.27  E-value=4.1e-06  Score=60.96  Aligned_cols=113  Identities=18%  Similarity=0.152  Sum_probs=75.0

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcch-hhhhhCCCCCCCCeEEEe-CCCCChhHHHHHhcCCCE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKD-LSFLTNLPGASERLQIFN-ADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~-~D~~d~~~~~~~~~~~d~   81 (327)
                      .||.|+|+ |.+|++++..|+.+|  .++..+++ ++..... ...+.+............ .|.   +    .++++|+
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~-~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~---~----~~~daDv   72 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDI-AKERVEAEVLDMQHGSSFYPTVSIDGSDDP---E----ICRDADM   72 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-SHHHHHHHHHHHHHTGGGSTTCEEEEESCG---G----GGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEe-ccccchhHHHHHHhccccCCCceeecCCCH---H----HhhCCcE
Confidence            57999996 999999999999887  47888888 4322211 111211100012233332 222   2    3567899


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      ||-+||.......... +.+..|..-.+.+++.+++.++-..++.+|
T Consensus        73 VVitaG~~~~~g~~R~-dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          73 VVITAGPRQKPGQSRL-ELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             EEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EEEecccccCCCCchh-hhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            9999997665555555 889999999999999999988444555554

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.26  E-value=2.5e-06  Score=62.30  Aligned_cols=114  Identities=15%  Similarity=0.035  Sum_probs=74.8

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcchh-hhhhCCC-CCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKDL-SFLTNLP-GASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~-~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      |||.|+|| |.+|++++..|+..+  .++..+++ ++...... ..+.... ......+....  .|.+    .+.++|+
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di-~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~----~~~dadv   72 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDV-VEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA----DTANSDI   72 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-SSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG----GGTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEecc-ccccchhhhhhhhcccchhcccceEEec--CCHH----HhcCCeE
Confidence            57999996 999999999999886  58999998 44332211 1111110 00122333221  2222    3678999


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      |+-+||.......... +.++.|..-.+.+++.+.+.++-..++.+|
T Consensus        73 vvitag~~~~~g~~r~-~l~~~N~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          73 VIITAGLPRKPGMTRE-DLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             EEECCSCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEEEecCCCCCCchH-HHHHHHHHHHHHHHHHhhccCCCeEEEEec
Confidence            9999987554444444 889999999999999999987444555544

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.22  E-value=5.5e-06  Score=61.31  Aligned_cols=120  Identities=18%  Similarity=0.084  Sum_probs=73.7

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCC----eEEEEE-cCCCCCcchhhhh----hCCCCCCCCeEEEeCCCCChhH
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGY----FVTTTV-RSDPEHKKDLSFL----TNLPGASERLQIFNADLNDPES   71 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~----~V~~~~-r~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~d~~~   71 (327)
                      |. ..+||.|+||+|++|++++-.|+..+.    +.+.+. -..+.........    ...  .......+...-    .
T Consensus         1 m~-~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----~   73 (154)
T d1y7ta1           1 MK-APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC--AFPLLAGLEATD----D   73 (154)
T ss_dssp             CC-CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT--TCTTEEEEEEES----C
T ss_pred             CC-CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcc--ccccccccccCC----c
Confidence            44 245899999999999999999987642    111111 1122222222111    111  012333333222    2


Q ss_pred             HHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCC-ccEEEEec
Q 020334           72 FDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT-VKRFVYTS  128 (327)
Q Consensus        72 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~~v~~S  128 (327)
                      ..+.++++|+||-+||.......+.. +.+..|+...+.+.+.+.+..+ ...++.+|
T Consensus        74 ~~~~~~~advViitaG~~~~pg~~r~-dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          74 PKVAFKDADYALLVGAAPRKAGMERR-DLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             HHHHTTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             hhhhcccccEEEeecCcCCCCCCcHH-HHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            34568899999999997665555555 8899999999999999998642 23455555

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.17  E-value=2.2e-06  Score=62.06  Aligned_cols=72  Identities=17%  Similarity=0.122  Sum_probs=56.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVIH   84 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vih   84 (327)
                      |+++|.|+ |-+|+++++.|.+.|++|++++. +++....+   ..     .....+.+|.++++.+.++ +.++|.||-
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~-d~~~~~~~---~~-----~~~~~~~gd~~~~~~l~~a~i~~a~~vi~   70 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDI-NEEKVNAY---AS-----YATHAVIANATEENELLSLGIRNFEYVIV   70 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEES-CHHHHHHT---TT-----TCSEEEECCTTCTTHHHHHTGGGCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecC-cHHHHHHH---HH-----hCCcceeeecccchhhhccCCccccEEEE
Confidence            57889986 99999999999999999999999 54443332   21     3557788999999999876 678898876


Q ss_pred             ccC
Q 020334           85 VAA   87 (327)
Q Consensus        85 ~a~   87 (327)
                      +.+
T Consensus        71 ~~~   73 (134)
T d2hmva1          71 AIG   73 (134)
T ss_dssp             CCC
T ss_pred             EcC
Confidence            554

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=98.12  E-value=1.4e-05  Score=60.23  Aligned_cols=114  Identities=12%  Similarity=0.046  Sum_probs=72.8

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHC---C--C--eEEEEEcCCCCCcchhh----hhhCCCCCCCCeEEEeCCCCChhHHHH
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDH---G--Y--FVTTTVRSDPEHKKDLS----FLTNLPGASERLQIFNADLNDPESFDA   74 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~---g--~--~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~D~~d~~~~~~   74 (327)
                      .||.||||+|.||++++-.|++.   |  .  ++..++.  +.....+.    .+....  .+....+..-    ....+
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di--~~~~~~l~g~~mdl~d~a--~~~~~~~~~~----~~~~~   96 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGS--ERSFQALEGVAMELEDSL--YPLLREVSIG----IDPYE   96 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECC--GGGHHHHHHHHHHHHTTT--CTTEEEEEEE----SCHHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecC--ccccchhcchhhhhcccc--cccccCcccc----ccchh
Confidence            37999999999999999999874   2  2  3444444  22212111    112111  1222222211    12346


Q ss_pred             HhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCC-ccEEEEec
Q 020334           75 AIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGT-VKRFVYTS  128 (327)
Q Consensus        75 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~~v~~S  128 (327)
                      .++++|+||-++|.......... +.+..|....+.+.+++.++.+ ..+++.+|
T Consensus        97 ~~~~aDvVvi~ag~~rkpg~tR~-Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          97 VFEDVDWALLIGAKPRGPGMERA-ALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             HTTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             hccCCceEEEeeccCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            68899999999997665555555 8999999999999999999752 34565555

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.06  E-value=8.4e-06  Score=59.23  Aligned_cols=113  Identities=14%  Similarity=0.101  Sum_probs=73.8

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcch-hhhhhCC-CCCCCCeEEE-eCCCCChhHHHHHhcCCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKD-LSFLTNL-PGASERLQIF-NADLNDPESFDAAIAGCA   80 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~-~~~~~~~-~~~~~~~~~~-~~D~~d~~~~~~~~~~~d   80 (327)
                      |||.|+|+ |.+|++++..|+.+|  .++..+++ +++.... ...+.+. +......... ..|.       +.++++|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di-~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~-------~~~~~ad   71 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDI-AEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-------SLLKGSE   71 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECS-SHHHHHHHHHHHHHHHHTTTCCCEEEEESCG-------GGGTTCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEec-ccchhhHHHHHHhhhccccCCCCccccCCCH-------HHhcccc
Confidence            57999996 999999999999876  47888887 4322211 1111110 0001122222 2343       2466899


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      +||-+|+.......... +.+..|....+.+++.+++.++...++.+|
T Consensus        72 iVvitag~~~~~g~~r~-~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          72 IIVVTAGLARKPGMTRL-DLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             EEEECCCCCCCSSCCHH-HHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEEEeccccCCCCCchH-HHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            99999986554445555 889999999999999999987444555444

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=98.02  E-value=2.7e-05  Score=53.78  Aligned_cols=67  Identities=12%  Similarity=0.128  Sum_probs=53.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v   82 (327)
                      ..||.|+|| |++|+-++....+.|+++++++.+.......+           .-+++.+|..|.+.+.++..  ++|+|
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v-----------a~~~i~~~~~d~~~l~~~~~~~~~Dvi   78 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHV-----------AHRSHVINMLDGDALRRVVELEKPHYI   78 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG-----------SSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc-----------CCeEEECCCCCHHHHHHHHHhhCCceE
Confidence            468999995 99999999999999999999998433333222           23788899999999988774  57888


Q ss_pred             E
Q 020334           83 I   83 (327)
Q Consensus        83 i   83 (327)
                      .
T Consensus        79 T   79 (111)
T d1kjqa2          79 V   79 (111)
T ss_dssp             E
T ss_pred             E
Confidence            5

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.00  E-value=8.4e-06  Score=60.28  Aligned_cols=114  Identities=19%  Similarity=0.160  Sum_probs=74.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCc-chhhhhhCCC-CCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHK-KDLSFLTNLP-GASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      ..||.|+|+ |.+|++++..|+.+|  .++..+++ +++.. .....+.+.. ...........|..       .+.++|
T Consensus        19 ~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~-~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~-------~~~~ad   89 (159)
T d2ldxa1          19 RCKITVVGV-GDVGMACAISILLKGLADELALVDA-DTDKLRGEALDLQHGSLFLSTPKIVFGKDYN-------VSANSK   89 (159)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECS-CHHHHHHHHHHHHHTTTTCSCCEEEEESSGG-------GGTTEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeC-CchhhhccHHHHhCcchhcCCCeEEeccchh-------hhcccc
Confidence            357999996 999999999999886  47888888 43222 1111222111 11112222333432       356789


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      +||.+||.......... +.++.|+...+.++..+++.++-..++.+|
T Consensus        90 ivvitag~~~~~~~~R~-dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          90 LVIITAGARMVSGQTRL-DLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             EEEECCSCCCCTTTCSS-CTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             EEEEecccccCCCCCHH-HHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence            99999987554444444 668899999999999999887445566555

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.99  E-value=9.3e-06  Score=59.06  Aligned_cols=113  Identities=11%  Similarity=0.046  Sum_probs=67.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcch-hhhhhCCCC-CCCCeEEE-eCCCCChhHHHHHhcCCCE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKD-LSFLTNLPG-ASERLQIF-NADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~-~~~~~~~~~-~~~~~~~~-~~D~~d~~~~~~~~~~~d~   81 (327)
                      +||.|+|+ |.+|++++-.|+.++ .++..++. .++.... ...+..... ........ ..|..       .+.++|+
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~-~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~-------~~~~adv   72 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDI-VEGVPQGKALDLYEASPIEGFDVRVTGTNNYA-------DTANSDV   72 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECS-SSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG-------GGTTCSE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEee-ccccchhHHHHhhccccccCCCCEEEecCcHH-------HhcCCCE
Confidence            68999996 999999999998876 47888887 4332211 111111000 00122222 23332       2457899


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      ||-+||.......... +.+..|+...+.+++.+.+.++...++.+|
T Consensus        73 vvitag~~~~~~~~r~-dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          73 IVVTSGAPRKPGMSRE-DLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             EEECCSCC----------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             EEEeeeccCCcCcchh-HHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            9999986543333433 778899999999999999987444555444

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.97  E-value=1.4e-05  Score=58.35  Aligned_cols=113  Identities=16%  Similarity=0.083  Sum_probs=70.9

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcCCCCCcch-hhhhhCC-CCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRSDPEHKKD-LSFLTNL-PGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~-~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      |||.|+|+ |++|+.++-.|+.+|  .++..+++ +...... ...+.+. ...........+|.   +    .++++|+
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di-~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~---~----~l~~adi   72 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDA-NEAKVKADQIDFQDAMANLEAHGNIVINDW---A----ALADADV   72 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHHHGGGSSSCCEEEESCG---G----GGTTCSE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEec-ccchhhhHHHhhhccccccCCccceeccCH---H----HhccccE
Confidence            78999995 999999999999876  47888887 4332211 1112110 00112334444443   2    3568999


Q ss_pred             EEEccCCCCCC----CCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           82 VIHVAAPIDID----GKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        82 vih~a~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      ||-+||.....    ..+. .+.+..|+...+.+.+.+++.++-..++.+|
T Consensus        73 VVitaG~~~~~~~~~g~~R-~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          73 VISTLGNIKLQQDNPTGDR-FAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             EEECCSCGGGTC--------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEeccccccccccCCccH-HHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            99999854311    1122 2567889999999999999987445555544

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.94  E-value=3e-05  Score=56.68  Aligned_cols=116  Identities=15%  Similarity=0.058  Sum_probs=71.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchh-hhhhCCCC-CCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDL-SFLTNLPG-ASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~-~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      +.||.|+|+ |.+|++++..|..++ .++..+++ ++...... ..+.+... ..........+  +.    +.++++|+
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di-~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~adv   74 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDI-VKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAGADV   74 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECS-SSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTTCSE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEec-cCCcceeeecchhhhccccCCCcEEEecc--cc----cccCCCcE
Confidence            568999995 999999998887776 47888888 44332221 11111000 00122222211  22    23567899


Q ss_pred             EEEccCCCCCCC----CchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           82 VIHVAAPIDIDG----KETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        82 vih~a~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      ||-+++......    .....+.+..|....+.+++.+++.++-..++.+|
T Consensus        75 vvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          75 VIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             EEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            999998544211    11123778999999999999999988444555554

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.93  E-value=1.3e-05  Score=60.99  Aligned_cols=80  Identities=15%  Similarity=-0.003  Sum_probs=49.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      .|||.|+|| |-+|..++..|+++|++|.+++| ++................+..+..........++.+.++++|+||-
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii   78 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDI-DAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI   78 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-CHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEE
Confidence            378999997 99999999999999999999999 4433332221100000001112221112112235677889999997


Q ss_pred             cc
Q 020334           85 VA   86 (327)
Q Consensus        85 ~a   86 (327)
                      +.
T Consensus        79 ~v   80 (184)
T d1bg6a2          79 VV   80 (184)
T ss_dssp             CS
T ss_pred             EE
Confidence            65

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.90  E-value=2.4e-05  Score=57.61  Aligned_cols=38  Identities=24%  Similarity=0.426  Sum_probs=35.3

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRS   38 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (327)
                      |+.++++|.|+||.|.+|+.+++.|.+.||+|.+.+|+
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~   42 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDRE   42 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTT
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccc
Confidence            56678899999999999999999999999999999994

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.90  E-value=3.4e-05  Score=56.07  Aligned_cols=33  Identities=21%  Similarity=0.252  Sum_probs=26.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC----CeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG----YFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~r   37 (327)
                      |+||.|+||||++|+.+++.|+++.    .++..+.+
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~s   37 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFST   37 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEES
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeec
Confidence            5689999999999999999887652    35666665

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.80  E-value=5.5e-06  Score=64.07  Aligned_cols=36  Identities=33%  Similarity=0.459  Sum_probs=32.4

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH   42 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   42 (327)
                      |||.|+||+|.+|++|++.|++.|++|.+.+| ++++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R-~~e~   36 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSR-REEK   36 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEES-SHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEEC-CHHH
Confidence            57999999999999999999999999999999 5443

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.80  E-value=3e-05  Score=57.21  Aligned_cols=115  Identities=16%  Similarity=-0.011  Sum_probs=69.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-----Ce--EEEEEcCCCCCcchhhhh----hCCCCCCCCeEEEeCCCCChhHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-----YF--VTTTVRSDPEHKKDLSFL----TNLPGASERLQIFNADLNDPESFD   73 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-----~~--V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~d~~~~~   73 (327)
                      .+||.|+||+|.+|++++-.|++.+     ..  +..++.  .........+    ....  ......+..--    ...
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~--~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~----~~~   74 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDI--TPMMGVLDGVLMELQDCA--LPLLKDVIATD----KEE   74 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECC--GGGHHHHHHHHHHHHHTC--CTTEEEEEEES----CHH
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecC--ccchhhhhhhhhhhcccc--cccccccccCc----ccc
Confidence            5689999999999999999998653     22  333333  2222211111    1110  12222222211    134


Q ss_pred             HHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCcc-EEEEec
Q 020334           74 AAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVK-RFVYTS  128 (327)
Q Consensus        74 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~v~~S  128 (327)
                      +.++++|+||-++|.......... +.+..|..-.+.+.+.+.+..+.. .++.+|
T Consensus        75 ~~~~~~dvVVitag~~~~~g~sr~-dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          75 IAFKDLDVAILVGSMPRRDGMERK-DLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             HHTTTCSEEEECCSCCCCTTCCTT-TTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cccCCceEEEEecccCCCCCCchh-HHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            567889999999987654444444 678999999999999998764233 344444

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.68  E-value=6e-05  Score=57.26  Aligned_cols=102  Identities=15%  Similarity=0.036  Sum_probs=64.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v   82 (327)
                      ..+|||+||+|.+|..+++.....|++|+++++ ++++...++.+-      ....+..-|-...+.+.+...  ++|+|
T Consensus        30 G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~-~~~~~~~~~~~G------a~~vi~~~~~~~~~~~~~~~~~~Gvd~v  102 (182)
T d1v3va2          30 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG-SDEKIAYLKQIG------FDAAFNYKTVNSLEEALKKASPDGYDCY  102 (182)
T ss_dssp             SCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHTT------CSEEEETTSCSCHHHHHHHHCTTCEEEE
T ss_pred             CCEEEEEeCCCchhHHHHHHHHccCCEEEEeCC-CHHHHHHHHhhh------hhhhcccccccHHHHHHHHhhcCCCcee
Confidence            568999999999999999999999999999998 443333333221      122222233333344444433  69999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceee
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTV  133 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~  133 (327)
                      +++.|.          +.       ....++.++..+   +++.++....|
T Consensus       103 ~D~vG~----------~~-------~~~~~~~l~~~G---~~v~~G~~~~~  133 (182)
T d1v3va2         103 FDNVGG----------EF-------LNTVLSQMKDFG---KIAICGAISVY  133 (182)
T ss_dssp             EESSCH----------HH-------HHHHGGGEEEEE---EEEECCCGGGT
T ss_pred             EEecCc----------hh-------hhhhhhhccCCC---eEEeecceeec
Confidence            999872          22       134445555443   77776655444

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.68  E-value=3.2e-05  Score=59.87  Aligned_cols=31  Identities=19%  Similarity=0.217  Sum_probs=29.0

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      |||.|.| .||+|..++..|++.|++|++++.
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~   31 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDV   31 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeC
Confidence            5799997 699999999999999999999988

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.68  E-value=2.3e-05  Score=49.98  Aligned_cols=41  Identities=29%  Similarity=0.418  Sum_probs=34.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL   46 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~   46 (327)
                      ..+|||+||+|-+|+..++.+...|++|+++++ ++++.+.+
T Consensus        32 ~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~-s~~k~~~~   72 (77)
T d1o8ca2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSG-RESTHEYL   72 (77)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEES-CGGGHHHH
T ss_pred             CCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEEC-CHHHHHHH
Confidence            468999999999999999999999999999999 55554443

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.65  E-value=5.8e-05  Score=56.69  Aligned_cols=73  Identities=21%  Similarity=0.127  Sum_probs=49.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      ..+|||+||+|-+|...++.+...|.+|+++++ ++++.+....+        +...+ .|..+.........++|+|+.
T Consensus        28 g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~-~~~~~~~~~~l--------Ga~~~-i~~~~~~~~~~~~~g~D~v~d   97 (171)
T d1iz0a2          28 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS-RPEKLALPLAL--------GAEEA-ATYAEVPERAKAWGGLDLVLE   97 (171)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES-SGGGSHHHHHT--------TCSEE-EEGGGHHHHHHHTTSEEEEEE
T ss_pred             CCEEEEEeccccchhhhhhhhcccccccccccc-ccccccccccc--------cccee-eehhhhhhhhhcccccccccc
Confidence            568999999999999999999999999999998 54444443332        11111 133332222223357999999


Q ss_pred             ccC
Q 020334           85 VAA   87 (327)
Q Consensus        85 ~a~   87 (327)
                      +.|
T Consensus        98 ~~G  100 (171)
T d1iz0a2          98 VRG  100 (171)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            876

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.56  E-value=0.00011  Score=54.79  Aligned_cols=36  Identities=28%  Similarity=0.338  Sum_probs=32.0

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK   43 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   43 (327)
                      |||+|+|+ |.+|+.++..|++.|++|.+++| ++...
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r-~~~~~   36 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLR-VPQPY   36 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-SCCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEc-CHHHh
Confidence            68999997 99999999999999999999999 44433

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.55  E-value=8.6e-05  Score=55.35  Aligned_cols=31  Identities=32%  Similarity=0.412  Sum_probs=29.1

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      |||.|+|. |.+|+.+++.|.++|++|++.+|
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~   31 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSR   31 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEEC
Confidence            57999985 99999999999999999999999

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.55  E-value=9.2e-05  Score=53.71  Aligned_cols=33  Identities=24%  Similarity=0.214  Sum_probs=26.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC---CeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG---YFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r   37 (327)
                      +++|.|.||||++|..|++.|.+++   .++..+..
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s   37 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLAS   37 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEee
Confidence            5789999999999999999998654   35665544

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=6.7e-05  Score=56.50  Aligned_cols=95  Identities=19%  Similarity=0.118  Sum_probs=60.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHH---HHhc--CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFD---AAIA--GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~---~~~~--~~   79 (327)
                      ..+|||+||+|-+|...++.+...|++|+++++ ++++...+..+       +-...  .|..+.+..+   +...  ++
T Consensus        29 g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~-~~~~~~~~~~~-------Ga~~v--i~~~~~~~~~~i~~~t~~~g~   98 (174)
T d1yb5a2          29 GESVLVHGASGGVGLAACQIARAYGLKILGTAG-TEEGQKIVLQN-------GAHEV--FNHREVNYIDKIKKYVGEKGI   98 (174)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHT-------TCSEE--EETTSTTHHHHHHHHHCTTCE
T ss_pred             CCEEEEEeccccccccccccccccCcccccccc-ccccccccccc-------Ccccc--cccccccHHHHhhhhhccCCc
Confidence            568999999999999999999999999999998 44333333222       11122  2444443333   3332  58


Q ss_pred             CEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           80 AGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        80 d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      |+|+.+.+.          ..       ....++.+++.+   +++.++.
T Consensus        99 d~v~d~~g~----------~~-------~~~~~~~l~~~G---~iv~~G~  128 (174)
T d1yb5a2          99 DIIIEMLAN----------VN-------LSKDLSLLSHGG---RVIVVGS  128 (174)
T ss_dssp             EEEEESCHH----------HH-------HHHHHHHEEEEE---EEEECCC
T ss_pred             eEEeecccH----------HH-------HHHHHhccCCCC---EEEEEec
Confidence            999998762          11       233455565544   8887764

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.53  E-value=0.00018  Score=56.16  Aligned_cols=74  Identities=16%  Similarity=0.106  Sum_probs=52.8

Q ss_pred             CCCeEEEeCC----------------cchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCC
Q 020334            4 QKGKVCVTGG----------------TGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN   67 (327)
Q Consensus         4 ~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   67 (327)
                      .+++||||+|                ||..|.+|++++..+|++|+.+.-......            +..+..+...  
T Consensus         5 ~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~------------p~~~~~~~~~--   70 (223)
T d1u7za_           5 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT------------PPFVKRVDVM--   70 (223)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC------------CTTEEEEECC--
T ss_pred             CCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCc------------ccccccceeh--
Confidence            3688999965                799999999999999999999877322111            1355555433  


Q ss_pred             ChhHH----HHHhcCCCEEEEccCCCCC
Q 020334           68 DPESF----DAAIAGCAGVIHVAAPIDI   91 (327)
Q Consensus        68 d~~~~----~~~~~~~d~vih~a~~~~~   91 (327)
                      ..+++    .+.+.++|++|++|+..++
T Consensus        71 t~~~m~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          71 TALEMEAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             hhHHHHHHHHhhhccceeEeeeechhhh
Confidence            33333    3445689999999998764

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.51  E-value=0.00019  Score=54.19  Aligned_cols=79  Identities=18%  Similarity=0.187  Sum_probs=49.0

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCC-CCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNL-PGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      |+|.|+|| |-.|++++..|+++|++|+...| ..+. .....+... ....-.......++.-..++.++++++|+||.
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r-~~~~-~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~   77 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGT-EFDT-EILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLL   77 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECC-GGGH-HHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEe-cccH-HHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhc
Confidence            67999996 99999999999999999999988 2211 122222111 00000111111122334567888999999987


Q ss_pred             ccC
Q 020334           85 VAA   87 (327)
Q Consensus        85 ~a~   87 (327)
                      +..
T Consensus        78 avp   80 (180)
T d1txga2          78 GVS   80 (180)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            654

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.51  E-value=7.3e-05  Score=55.29  Aligned_cols=71  Identities=21%  Similarity=0.186  Sum_probs=51.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      .+++|||+|+ |-+|..+++.|.+.|. ++++..| +.++...+....       +...     .+.+++.+.+.++|+|
T Consensus        23 ~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nR-t~~ka~~l~~~~-------~~~~-----~~~~~~~~~l~~~Div   88 (159)
T d1gpja2          23 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANR-TYERAVELARDL-------GGEA-----VRFDELVDHLARSDVV   88 (159)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECS-SHHHHHHHHHHH-------TCEE-----CCGGGHHHHHHTCSEE
T ss_pred             ccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcC-cHHHHHHHHHhh-------hccc-----ccchhHHHHhccCCEE
Confidence            4689999997 9999999999999997 5888888 443333332211       1222     2345677788899999


Q ss_pred             EEccCC
Q 020334           83 IHVAAP   88 (327)
Q Consensus        83 ih~a~~   88 (327)
                      |.|.+.
T Consensus        89 i~atss   94 (159)
T d1gpja2          89 VSATAA   94 (159)
T ss_dssp             EECCSS
T ss_pred             EEecCC
Confidence            999864

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.48  E-value=8.7e-05  Score=56.31  Aligned_cols=82  Identities=13%  Similarity=0.080  Sum_probs=58.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ..++|+|+|+ |..|++++..|.+.|. +++++.| +++...+...+.+.............++.+.+.+...+..+|+|
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii   94 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNR-RDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL   94 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEEC-SSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeecc-chHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhccccee
Confidence            3689999996 8899999999999986 6888888 55544433222110000012345567888888888888899999


Q ss_pred             EEccC
Q 020334           83 IHVAA   87 (327)
Q Consensus        83 ih~a~   87 (327)
                      ||+..
T Consensus        95 IN~Tp   99 (182)
T d1vi2a1          95 TNGTK   99 (182)
T ss_dssp             EECSS
T ss_pred             ccccC
Confidence            99975

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.48  E-value=0.00011  Score=55.16  Aligned_cols=97  Identities=19%  Similarity=0.207  Sum_probs=60.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v   82 (327)
                      ..+|||+||+|.+|+..++.+...|.+|+++++ ++++...+..+-.      . ..+.-+-.+.+ ......  ++|+|
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~-s~~k~~~~~~lGa------~-~vi~~~~~~~~-~~~~~~~~gvD~v  102 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTG-KAAEHDYLRVLGA------K-EVLAREDVMAE-RIRPLDKQRWAAA  102 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEES-CTTCHHHHHHTTC------S-EEEECC----------CCSCCEEEE
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecC-chHHHHHHHhccc------c-eeeecchhHHH-HHHHhhccCcCEE
Confidence            357999999999999999999999999999999 6556555554321      1 22211111111 222222  68999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccc
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSG  130 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~  130 (327)
                      +.+.+-..                 ....++.++..   .+++.++..
T Consensus       103 id~vgg~~-----------------~~~~l~~l~~~---Griv~~G~~  130 (176)
T d1xa0a2         103 VDPVGGRT-----------------LATVLSRMRYG---GAVAVSGLT  130 (176)
T ss_dssp             EECSTTTT-----------------HHHHHHTEEEE---EEEEECSCC
T ss_pred             EEcCCchh-----------------HHHHHHHhCCC---ceEEEeecc
Confidence            99987321                 12344555544   488877764

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.47  E-value=2.1e-05  Score=60.16  Aligned_cols=79  Identities=18%  Similarity=0.118  Sum_probs=48.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      |+||.|+|| |-.|++++..|+++|++|+..+| +++....+..-...+.-.+++.+ .-++.-..++.++++++|+||.
T Consensus         7 m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r-~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~iii   83 (189)
T d1n1ea2           7 LNKAVVFGS-GAFGTALAMVLSKKCREVCVWHM-NEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEIILF   83 (189)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTEEEEEEECS-CHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCEEE
T ss_pred             eceEEEECC-CHHHHHHHHHHHHcCCeEEEEEe-cHHHHHHHhhccccccccccccc-ccccccchhhhhccCCCCEEEE
Confidence            468999995 99999999999999999999998 44333222111100000011111 1112112346778889999987


Q ss_pred             cc
Q 020334           85 VA   86 (327)
Q Consensus        85 ~a   86 (327)
                      +.
T Consensus        84 av   85 (189)
T d1n1ea2          84 VI   85 (189)
T ss_dssp             CS
T ss_pred             cC
Confidence            65

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.46  E-value=0.0005  Score=51.22  Aligned_cols=96  Identities=18%  Similarity=0.103  Sum_probs=60.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCC--CChhHHHHHh-----c
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL--NDPESFDAAI-----A   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~d~~~~~~~~-----~   77 (327)
                      ..+|+|+| +|-+|...++.+...|.+|+++++ ++.+....+.+.      .. ..+..|-  .+...+.+.+     .
T Consensus        27 g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~-~~~r~~~a~~~g------a~-~~~~~~~~~~~~~~~~~~~~~~~g~   97 (170)
T d1e3ja2          27 GTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTAR-SPRRLEVAKNCG------AD-VTLVVDPAKEEESSIIERIRSAIGD   97 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHTT------CS-EEEECCTTTSCHHHHHHHHHHHSSS
T ss_pred             CCEEEEEc-ccccchhhHhhHhhhcccccccch-HHHHHHHHHHcC------Cc-EEEeccccccccchhhhhhhccccc
Confidence            56899998 689999999999899999999999 544433333321      12 2222232  2333443333     2


Q ss_pred             CCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           78 GCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        78 ~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      ++|+||.|++..         .       .....++.++..+   +++.++
T Consensus        98 g~D~vid~~g~~---------~-------~~~~a~~~~~~~G---~iv~~G  129 (170)
T d1e3ja2          98 LPNVTIDCSGNE---------K-------CITIGINITRTGG---TLMLVG  129 (170)
T ss_dssp             CCSEEEECSCCH---------H-------HHHHHHHHSCTTC---EEEECS
T ss_pred             CCceeeecCCCh---------H-------HHHHHHHHHhcCC---ceEEEe
Confidence            589999999731         1       1234456666554   788776

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.44  E-value=0.00031  Score=51.47  Aligned_cols=75  Identities=23%  Similarity=0.333  Sum_probs=57.4

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCC-cchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEH-KKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVI   83 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi   83 (327)
                      ..|+|.|. |-+|..+++.|.+.|++|++++. +++. ........     ..++.++.||.+|++.+.++ +++++.||
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~-d~~~~~~~~~~~~-----~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi   76 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISN-LPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEEC-CCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEec-cchhHHHHHHHhh-----cCCcEEEEccCcchHHHHHhccccCCEEE
Confidence            46899996 99999999999999999999988 4432 22222222     24789999999999998765 46789998


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      -+..
T Consensus        77 ~~~~   80 (153)
T d1id1a_          77 ALSD   80 (153)
T ss_dssp             ECSS
T ss_pred             Eccc
Confidence            6653

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.42  E-value=8.4e-05  Score=56.19  Aligned_cols=74  Identities=9%  Similarity=0.050  Sum_probs=51.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChh---HHHHHhc--CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPE---SFDAAIA--GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~~   79 (327)
                      ..+|||+||+|.+|..+++.+...|.+|+++++ ++.+.+.+..+-       --+.+  |..+++   .+.++-.  ++
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~-s~~k~~~~~~lG-------a~~vi--~~~~~d~~~~v~~~t~g~g~   98 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG-TAQKAQSALKAG-------AWQVI--NYREEDLVERLKEITGGKKV   98 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES-SHHHHHHHHHHT-------CSEEE--ETTTSCHHHHHHHHTTTCCE
T ss_pred             CCEEEEEccccccchHHHHHHHHhCCeEeeccc-chHHHHHHHhcC-------CeEEE--ECCCCCHHHHHHHHhCCCCe
Confidence            568999999999999999999999999999999 544444443331       11222  444433   3333332  57


Q ss_pred             CEEEEccCC
Q 020334           80 AGVIHVAAP   88 (327)
Q Consensus        80 d~vih~a~~   88 (327)
                      |+|+.+.+.
T Consensus        99 d~v~d~~g~  107 (179)
T d1qora2          99 RVVYDSVGR  107 (179)
T ss_dssp             EEEEECSCG
T ss_pred             EEEEeCccH
Confidence            999999873

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.39  E-value=0.001  Score=47.92  Aligned_cols=32  Identities=22%  Similarity=0.285  Sum_probs=24.9

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC----CeEEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG----YFVTTTVR   37 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~r   37 (327)
                      |||.|.||||++|..|++.|++..    .++..+..
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss   36 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFST   36 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEES
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecc
Confidence            579999999999999999888643    34554444

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.32  E-value=0.00038  Score=52.42  Aligned_cols=32  Identities=19%  Similarity=0.304  Sum_probs=27.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTV   36 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~   36 (327)
                      |+||.|.|||||+|..|++.|.+. ..+|..+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            578999999999999999999997 56765543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.30  E-value=0.00011  Score=54.65  Aligned_cols=66  Identities=20%  Similarity=0.249  Sum_probs=45.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      |++|.++| .|.+|+++++.|+++||+|++.+| ++.....+...        +..       ......+.+..+|+|+-
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~-~~~~~~~~~~~--------~~~-------~~~~~~e~~~~~diii~   63 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDL-VQSAVDGLVAA--------GAS-------AARSARDAVQGADVVIS   63 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-SHHHHHHHHHT--------TCE-------ECSSHHHHHTSCSEEEE
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEEC-chhhhhhhhhh--------hcc-------ccchhhhhccccCeeee
Confidence            46799998 699999999999999999999999 44333222211        111       11224556777888887


Q ss_pred             ccC
Q 020334           85 VAA   87 (327)
Q Consensus        85 ~a~   87 (327)
                      |..
T Consensus        64 ~v~   66 (162)
T d3cuma2          64 MLP   66 (162)
T ss_dssp             CCS
T ss_pred             ccc
Confidence            764

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.29  E-value=0.00039  Score=52.48  Aligned_cols=73  Identities=18%  Similarity=0.181  Sum_probs=49.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChh---HHHHHhc--CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPE---SFDAAIA--GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~~   79 (327)
                      +.+|||+||+|.+|..+++.+...|.+|+++++ ++++..   .+...     +...+ .|..+++   .+.+...  ++
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~-~~~~~~---~l~~~-----Ga~~v-i~~~~~~~~~~v~~~t~~~g~   95 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAG-SDAKRE---MLSRL-----GVEYV-GDSRSVDFADEILELTDGYGV   95 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES-SHHHHH---HHHTT-----CCSEE-EETTCSTHHHHHHHHTTTCCE
T ss_pred             CCEEEEECCCCCcccccchhhccccccceeeec-cccccc---ccccc-----ccccc-ccCCccCHHHHHHHHhCCCCE
Confidence            468999999999999999999889999999998 443333   33322     22221 2333433   3333332  68


Q ss_pred             CEEEEccC
Q 020334           80 AGVIHVAA   87 (327)
Q Consensus        80 d~vih~a~   87 (327)
                      |+|+.+.+
T Consensus        96 d~v~d~~g  103 (183)
T d1pqwa_          96 DVVLNSLA  103 (183)
T ss_dssp             EEEEECCC
T ss_pred             EEEEeccc
Confidence            99999987

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.22  E-value=0.00035  Score=52.25  Aligned_cols=33  Identities=24%  Similarity=0.261  Sum_probs=27.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r   37 (327)
                      |+||.|.||||++|..|++.|.+.. .++..+..
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s   34 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSS   34 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeec
Confidence            5689999999999999999999864 56665544

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.22  E-value=0.00029  Score=52.51  Aligned_cols=74  Identities=16%  Similarity=0.104  Sum_probs=49.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      ..+|+|+|+ |.+|...++.+...|.+|+++++ ++.+....+.+-      .. ..+.- ..+.+..+.....+|+++.
T Consensus        28 g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~-~~~k~~~a~~lG------a~-~~i~~-~~~~~~~~~~~~~~d~vi~   97 (168)
T d1piwa2          28 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISR-SSRKREDAMKMG------AD-HYIAT-LEEGDWGEKYFDTFDLIVV   97 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEES-SSTTHHHHHHHT------CS-EEEEG-GGTSCHHHHSCSCEEEEEE
T ss_pred             CCEEEEECC-CCcchhHHHHhhhcccccccccc-chhHHHHhhccC------Cc-EEeec-cchHHHHHhhhcccceEEE
Confidence            578999996 99999999888888999999999 655554444431      11 22211 1122334445567899999


Q ss_pred             ccCC
Q 020334           85 VAAP   88 (327)
Q Consensus        85 ~a~~   88 (327)
                      +.+.
T Consensus        98 ~~~~  101 (168)
T d1piwa2          98 CASS  101 (168)
T ss_dssp             CCSC
T ss_pred             EecC
Confidence            9764

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.0022  Score=47.61  Aligned_cols=75  Identities=16%  Similarity=0.127  Sum_probs=50.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-----C
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-----G   78 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~   78 (327)
                      ..+|+|+|+ |-+|...++.+...|. +|+++++ ++.+....+++       .--..+..+-.+.....+.+.     +
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~-~~~rl~~a~~~-------Ga~~~~~~~~~~~~~~~~~~~~~~g~g   97 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDL-SATRLSKAKEI-------GADLVLQISKESPQEIARKVEGQLGCK   97 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEES-CHHHHHHHHHT-------TCSEEEECSSCCHHHHHHHHHHHHTSC
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCCceEEeccC-CHHHHHHHHHh-------CCcccccccccccccccccccccCCCC
Confidence            468999986 9999999999999998 7999988 44333333322       112344444455555444432     6


Q ss_pred             CCEEEEccCC
Q 020334           79 CAGVIHVAAP   88 (327)
Q Consensus        79 ~d~vih~a~~   88 (327)
                      +|+||.+.|.
T Consensus        98 ~Dvvid~~G~  107 (171)
T d1pl8a2          98 PEVTIECTGA  107 (171)
T ss_dssp             CSEEEECSCC
T ss_pred             ceEEEeccCC
Confidence            8999999883

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.06  E-value=0.00016  Score=54.49  Aligned_cols=43  Identities=30%  Similarity=0.405  Sum_probs=36.2

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhh
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFL   49 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~   49 (327)
                      .+|||+||+|.+|+..++.+...|++|+++++ ++++...++.+
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~-~~~k~~~~~~l   75 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSG-RESTHEYLKSL   75 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEES-CGGGHHHHHHH
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEec-chhHHHHHHhh
Confidence            47999999999999999999999999999999 65555544443

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.06  E-value=0.00017  Score=53.49  Aligned_cols=65  Identities=25%  Similarity=0.350  Sum_probs=45.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      |||-|+| .|.+|+.+++.|+++|++|++.+| ++.....+..        .+...    ..   ...++++++|+|+-|
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~-~~~~~~~~~~--------~~~~~----~~---~~~e~~~~~d~ii~~   63 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDR-NPEAIADVIA--------AGAET----AS---TAKAIAEQCDVIITM   63 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-CHHHHHHHHH--------TTCEE----CS---SHHHHHHHCSEEEEC
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeC-CcchhHHHHH--------hhhhh----cc---cHHHHHhCCCeEEEE
Confidence            5699998 699999999999999999999999 5433333221        12221    11   244556678999877


Q ss_pred             cC
Q 020334           86 AA   87 (327)
Q Consensus        86 a~   87 (327)
                      ..
T Consensus        64 v~   65 (161)
T d1vpda2          64 LP   65 (161)
T ss_dssp             CS
T ss_pred             cC
Confidence            64

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.05  E-value=0.00011  Score=54.74  Aligned_cols=43  Identities=35%  Similarity=0.435  Sum_probs=36.3

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhh
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFL   49 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~   49 (327)
                      .+|||+||+|-+|...++.....|++|+++++ ++++...+..+
T Consensus        25 ~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~~~~l   67 (167)
T d1tt7a2          25 GSVLVTGATGGVGGIAVSMLNKRGYDVVASTG-NREAADYLKQL   67 (167)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHHTCCEEEEES-SSSTHHHHHHH
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCCceEEEec-CHHHHHHHHhh
Confidence            47999999999999999988889999999999 66565555544

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.05  E-value=0.00045  Score=51.54  Aligned_cols=32  Identities=22%  Similarity=0.335  Sum_probs=28.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r   37 (327)
                      |++|+|+| .|.+|+.+++.|.+.|+  +|++.+|
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~   34 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDI   34 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEEC
Confidence            46899998 59999999999999985  6888888

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.03  E-value=0.0018  Score=44.52  Aligned_cols=95  Identities=13%  Similarity=0.158  Sum_probs=62.5

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ..+++|||+|+ |-+|..-++.|++.|.+|++++. ..  ......+..    ..+++++..+..+.     -+.+++.|
T Consensus        10 l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~-~~--~~~~~~~~~----~~~i~~~~~~~~~~-----dl~~~~lv   76 (113)
T d1pjqa1          10 LRDRDCLIVGG-GDVAERKARLLLEAGARLTVNAL-TF--IPQFTVWAN----EGMLTLVEGPFDET-----LLDSCWLA   76 (113)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEES-SC--CHHHHHHHT----TTSCEEEESSCCGG-----GGTTCSEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEec-cC--ChHHHHHHh----cCCceeeccCCCHH-----HhCCCcEE
Confidence            34789999996 99999999999999999999876 32  222222222    14678887766542     25567888


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEecc
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSS  129 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS  129 (327)
                      +.+.+.       ..     .    ...+.+.|++.+   .+|++..
T Consensus        77 ~~at~d-------~~-----~----n~~i~~~a~~~~---ilVNv~D  104 (113)
T d1pjqa1          77 IAATDD-------DT-----V----NQRVSDAAESRR---IFCNVVD  104 (113)
T ss_dssp             EECCSC-------HH-----H----HHHHHHHHHHTT---CEEEETT
T ss_pred             eecCCC-------HH-----H----HHHHHHHHHHcC---CEEEeCC
Confidence            755431       11     1    246677777765   5676553

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.96  E-value=0.0013  Score=48.71  Aligned_cols=73  Identities=16%  Similarity=0.156  Sum_probs=51.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      ..+|+|.|+ |-+|...++.+...|++++++++ ++.+.+..+.+-       -..+  .|..+........+++|++|.
T Consensus        31 G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~-~~~~~~~a~~lG-------ad~~--i~~~~~~~~~~~~~~~D~vid   99 (168)
T d1uufa2          31 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTT-SEAKREAAKALG-------ADEV--VNSRNADEMAAHLKSFDFILN   99 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHT-------CSEE--EETTCHHHHHTTTTCEEEEEE
T ss_pred             CCEEEEecc-chHHHHHHHHhhcccccchhhcc-chhHHHHHhccC-------CcEE--EECchhhHHHHhcCCCceeee
Confidence            578999996 88999999999889999999888 444443333331       1122  355566555555668999999


Q ss_pred             ccCC
Q 020334           85 VAAP   88 (327)
Q Consensus        85 ~a~~   88 (327)
                      +.+.
T Consensus       100 ~~g~  103 (168)
T d1uufa2         100 TVAA  103 (168)
T ss_dssp             CCSS
T ss_pred             eeec
Confidence            9874

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.94  E-value=0.00061  Score=49.76  Aligned_cols=65  Identities=20%  Similarity=0.206  Sum_probs=43.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      |||.|+| .|.+|+.+++.|+++|++|++.++ .+.........        ++.     +.  ++..++++.+|+||-|
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~--------~~~-----~~--~~~~e~~~~~diIi~~   63 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLE-GRSPSTIERAR--------TVG-----VT--ETSEEDVYSCPVVISA   63 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCT-TCCHHHHHHHH--------HHT-----CE--ECCHHHHHTSSEEEEC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcC-chhHHHHHhhh--------ccc-----cc--ccHHHHHhhcCeEEEE
Confidence            5799998 699999999999999999998887 33222221110        111     11  1134567789999977


Q ss_pred             cC
Q 020334           86 AA   87 (327)
Q Consensus        86 a~   87 (327)
                      ..
T Consensus        64 v~   65 (152)
T d1i36a2          64 VT   65 (152)
T ss_dssp             SC
T ss_pred             ec
Confidence            64

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.90  E-value=0.0021  Score=48.17  Aligned_cols=63  Identities=24%  Similarity=0.207  Sum_probs=46.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..++|.|.| .|-||+.+++.|..-|.+|++.+| .+....                     ..-..++++++..+|+|+
T Consensus        41 ~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~-~~~~~~---------------------~~~~~~l~ell~~sDiv~   97 (181)
T d1qp8a1          41 QGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSR-TPKEGP---------------------WRFTNSLEEALREARAAV   97 (181)
T ss_dssp             TTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECS-SCCCSS---------------------SCCBSCSHHHHTTCSEEE
T ss_pred             cCceEEEec-cccccccceeeeeccccccccccc-cccccc---------------------eeeeechhhhhhccchhh
Confidence            367899999 599999999999999999999988 321110                     001124678899999998


Q ss_pred             EccCCC
Q 020334           84 HVAAPI   89 (327)
Q Consensus        84 h~a~~~   89 (327)
                      .+....
T Consensus        98 ~~~pl~  103 (181)
T d1qp8a1          98 CALPLN  103 (181)
T ss_dssp             ECCCCS
T ss_pred             cccccc
Confidence            776543

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.87  E-value=0.00059  Score=51.82  Aligned_cols=40  Identities=15%  Similarity=0.204  Sum_probs=31.9

Q ss_pred             CeEEE-eCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch
Q 020334            6 GKVCV-TGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD   45 (327)
Q Consensus         6 ~~ilV-tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   45 (327)
                      .+++| +||+|.+|...++.....|.+|++++|+.+.....
T Consensus        30 ~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~   70 (189)
T d1gu7a2          30 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEV   70 (189)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHH
T ss_pred             CEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchH
Confidence            46777 59999999999999988999999999844433333

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.85  E-value=0.001  Score=46.05  Aligned_cols=33  Identities=30%  Similarity=0.331  Sum_probs=30.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .+++++|.|| |++|..++..|.+.|.+|+++.|
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~   53 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEG   53 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEe
Confidence            4689999996 99999999999999999999998

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.84  E-value=0.0016  Score=48.89  Aligned_cols=75  Identities=15%  Similarity=0.115  Sum_probs=48.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHH----Hhc--
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDA----AIA--   77 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~----~~~--   77 (327)
                      ..+|||+|+ |-+|...++.+...|+ +|+++++ ++.+.....++       +--..+.-.-.+..+..+    ...  
T Consensus        29 G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~-~~~~~~~a~~l-------Ga~~vi~~~~~~~~~~~~~i~~~~~~~   99 (182)
T d1vj0a2          29 GKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAG-SPNRLKLAEEI-------GADLTLNRRETSVEERRKAIMDITHGR   99 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEES-CHHHHHHHHHT-------TCSEEEETTTSCHHHHHHHHHHHTTTS
T ss_pred             CCEEEEECC-Cccchhheeccccccccccccccc-ccccccccccc-------cceEEEeccccchHHHHHHHHHhhCCC
Confidence            468999997 8999999999999997 7999999 54444333332       111233222233332222    222  


Q ss_pred             CCCEEEEccCC
Q 020334           78 GCAGVIHVAAP   88 (327)
Q Consensus        78 ~~d~vih~a~~   88 (327)
                      ++|+||.+.|.
T Consensus       100 g~Dvvid~vG~  110 (182)
T d1vj0a2         100 GADFILEATGD  110 (182)
T ss_dssp             CEEEEEECSSC
T ss_pred             CceEEeecCCc
Confidence            58999999874

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.84  E-value=0.0013  Score=49.71  Aligned_cols=101  Identities=14%  Similarity=0.030  Sum_probs=54.0

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEE-EEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh-hHHHHHhc-CCCEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTT-TVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP-ESFDAAIA-GCAGV   82 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~-~~d~v   82 (327)
                      .+|||+||+|-+|+..++.+...|.++++ +++ +++....+..  ..    .-...+...-.+. +.+.++.. ++|+|
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~-~~e~~~~l~~--~~----gad~vi~~~~~~~~~~~~~~~~~GvDvv  104 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICG-TQEKCLFLTS--EL----GFDAAVNYKTGNVAEQLREACPGGVDVY  104 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEES-SHHHHHHHHH--HS----CCSEEEETTSSCHHHHHHHHCTTCEEEE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccc-hHHHHhhhhh--cc----cceEEeeccchhHHHHHHHHhccCceEE
Confidence            57999999999999999999889986554 444 3322222211  11    1112222222222 22333322 69999


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceee
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTV  133 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~  133 (327)
                      +.+.|.          +.+       ...++.++..   .+++.++++..|
T Consensus       105 ~D~vGg----------~~~-------~~~~~~l~~~---G~iv~~G~~s~~  135 (187)
T d1vj1a2         105 FDNVGG----------DIS-------NTVISQMNEN---SHIILCGQISQY  135 (187)
T ss_dssp             EESSCH----------HHH-------HHHHTTEEEE---EEEEEC------
T ss_pred             EecCCc----------hhH-------HHHhhhcccc---ccEEEecccccc
Confidence            999872          221       2344444443   488888765544

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.84  E-value=0.0003  Score=53.20  Aligned_cols=33  Identities=18%  Similarity=0.453  Sum_probs=27.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r   37 (327)
                      +.||.|.||||++|..|++.|.+.. .++..+.-
T Consensus         5 kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1           5 EVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             ccEEEEECcccHHHHHHHHHHHhCCCceEEEEec
Confidence            4689999999999999999999874 56655543

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.80  E-value=0.004  Score=43.64  Aligned_cols=30  Identities=17%  Similarity=0.158  Sum_probs=26.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTT   35 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~   35 (327)
                      |||.|.|++|-.|+.+++.+.++|+++.+.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence            579999999999999999998999987654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.80  E-value=0.011  Score=38.73  Aligned_cols=71  Identities=15%  Similarity=0.111  Sum_probs=48.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+|+|+|.|. |--|..+++.|.++|++|++.+.+......  ..+.      ..+..+.+.. +..    .+.++|.||
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~--~~~~------~~~~~~~~~~-~~~----~~~~~d~vi   69 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGL--DKLP------EAVERHTGSL-NDE----WLMAADLIV   69 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTG--GGSC------TTSCEEESBC-CHH----HHHHCSEEE
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhH--HHHh------hccceeeccc-chh----hhccCCEEE
Confidence            4689999997 889999999999999999999984322211  1111      2344554543 222    345679998


Q ss_pred             EccCC
Q 020334           84 HVAAP   88 (327)
Q Consensus        84 h~a~~   88 (327)
                      -.-|.
T Consensus        70 ~SPGi   74 (93)
T d2jfga1          70 ASPGI   74 (93)
T ss_dssp             ECTTS
T ss_pred             ECCCC
Confidence            87664

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.80  E-value=0.0011  Score=46.36  Aligned_cols=34  Identities=26%  Similarity=0.240  Sum_probs=31.3

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      ..+++++|.|| |+||..++..|.+.|.+|+++.|
T Consensus        21 ~~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~   54 (122)
T d1v59a2          21 EIPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEF   54 (122)
T ss_dssp             SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             cCCCeEEEECC-CchHHHHHHHHHhhCcceeEEEe
Confidence            35689999996 99999999999999999999988

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.75  E-value=0.0015  Score=45.44  Aligned_cols=35  Identities=31%  Similarity=0.215  Sum_probs=31.7

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcC
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRS   38 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (327)
                      ..+++++|+|| |+||..++..|.+.|.+|+++.|.
T Consensus        20 ~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~   54 (119)
T d3lada2          20 NVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAM   54 (119)
T ss_dssp             SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEee
Confidence            34689999996 999999999999999999999983

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.75  E-value=0.0062  Score=42.71  Aligned_cols=87  Identities=17%  Similarity=0.084  Sum_probs=57.3

Q ss_pred             CCeEEEeCCc---chhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCC
Q 020334            5 KGKVCVTGGT---GFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCA   80 (327)
Q Consensus         5 ~~~ilVtGat---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   80 (327)
                      .++|.|+|||   +..|..+.+.|.+.| ++|+.+..   ......           + ....-++.|      +-..+|
T Consensus         8 PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP---~~~~i~-----------G-~~~y~sl~d------lp~~vD   66 (129)
T d2csua1           8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNI---KEEEVQ-----------G-VKAYKSVKD------IPDEID   66 (129)
T ss_dssp             CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECS---SCSEET-----------T-EECBSSTTS------CSSCCS
T ss_pred             CCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEecc---CccccC-----------C-eEeecchhh------cCCCCc
Confidence            5899999999   999999999998765 68888844   221110           1 112223333      223579


Q ss_pred             EEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccc
Q 020334           81 GVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSG  130 (327)
Q Consensus        81 ~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~  130 (327)
                      .++-+...          +       .+..+++.|.+.+ ++.++.+|+.
T Consensus        67 lvvi~vp~----------~-------~~~~~~~~~~~~g-~~~~vi~s~G   98 (129)
T d2csua1          67 LAIIVVPK----------R-------FVKDTLIQCGEKG-VKGVVIITAG   98 (129)
T ss_dssp             EEEECSCH----------H-------HHHHHHHHHHHHT-CCEEEECCCS
T ss_pred             eEEEecCh----------H-------HhHHHHHHHHHcC-CCEEEEeccc
Confidence            88866541          1       1457788888888 8888888873

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.75  E-value=0.0087  Score=44.46  Aligned_cols=74  Identities=16%  Similarity=0.266  Sum_probs=50.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +.+|-|+| .|.+|+++++.|++.||+|++.+| ++++...+......   .....    -....+.+.+.+..+|.++-
T Consensus         2 ~~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr-~~~~~~~l~~~~~~---~~~~~----~a~~~~~~~~~~~~~~~ii~   72 (176)
T d2pgda2           2 QADIALIG-LAVMGQNLILNMNDHGFVVCAFNR-TVSKVDDFLANEAK---GTKVL----GAHSLEEMVSKLKKPRRIIL   72 (176)
T ss_dssp             CBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECS-STHHHHHHHHTTTT---TSSCE----ECSSHHHHHHHBCSSCEEEE
T ss_pred             CCcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcC-CHHHHHHHHHhccc---ccccc----chhhhhhhhhhhcccceEEE
Confidence            46799999 599999999999999999999999 55443333221100   00011    13355667778888899887


Q ss_pred             ccC
Q 020334           85 VAA   87 (327)
Q Consensus        85 ~a~   87 (327)
                      +..
T Consensus        73 ~~~   75 (176)
T d2pgda2          73 LVK   75 (176)
T ss_dssp             CSC
T ss_pred             ecC
Confidence            764

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.73  E-value=0.00088  Score=48.97  Aligned_cols=24  Identities=33%  Similarity=0.497  Sum_probs=21.9

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCC
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGY   30 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~   30 (327)
                      ||.|.|||||+|..|++.|.+..+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            799999999999999999988754

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.72  E-value=0.0009  Score=49.04  Aligned_cols=101  Identities=17%  Similarity=0.158  Sum_probs=68.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      .-+++|+|| |-.|.+-++.+...|.+|.+++. ++.....++....     ..++.   -..+.+.+.+.++++|+||.
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~-~~~~l~~l~~~~~-----~~~~~---~~~~~~~l~~~~~~aDivI~  101 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDI-NVERLSYLETLFG-----SRVEL---LYSNSAEIETAVAEADLLIG  101 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHG-----GGSEE---EECCHHHHHHHHHTCSEEEE
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeC-cHHHHHHHHHhhc-----cccee---ehhhhhhHHHhhccCcEEEE
Confidence            468999996 99999999999999999999999 5444444433321     12333   24567788999999999999


Q ss_pred             ccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           85 VAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        85 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      ++-.........          .++..++.+++-.   -+|=+|
T Consensus       102 aalipG~~aP~l----------It~~mv~~Mk~GS---VIVDva  132 (168)
T d1pjca1         102 AVLVPGRRAPIL----------VPASLVEQMRTGS---VIVDVA  132 (168)
T ss_dssp             CCCCTTSSCCCC----------BCHHHHTTSCTTC---EEEETT
T ss_pred             eeecCCcccCee----------ecHHHHhhcCCCc---EEEEee
Confidence            986544221111          1456667776543   445444

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.71  E-value=0.00072  Score=49.35  Aligned_cols=65  Identities=20%  Similarity=0.095  Sum_probs=44.9

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIHV   85 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   85 (327)
                      |||.++| +|-+|+++++.|.+.|++|++.+| ++++...+....       ++..    ..   +..++++++|+|+-+
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r-~~~~~~~l~~~~-------g~~~----~~---~~~~~~~~~dvIila   64 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGS-SLERSKEIAEQL-------ALPY----AM---SHQDLIDQVDLVILG   64 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECS-SHHHHHHHHHHH-------TCCB----CS---SHHHHHHTCSEEEEC
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcC-hHHhHHhhcccc-------ceee----ec---hhhhhhhccceeeee
Confidence            5799998 699999999999999999999988 444333332211       1111    11   245567789999866


Q ss_pred             c
Q 020334           86 A   86 (327)
Q Consensus        86 a   86 (327)
                      .
T Consensus        65 v   65 (152)
T d2ahra2          65 I   65 (152)
T ss_dssp             S
T ss_pred             c
Confidence            5

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.55  E-value=0.0018  Score=40.81  Aligned_cols=32  Identities=28%  Similarity=0.247  Sum_probs=29.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      +|+|.|.|| |++|+-++....+-|+++++++-
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp   32 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGL   32 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECT
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcC
Confidence            578999995 99999999999999999999987

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=96.53  E-value=0.0016  Score=51.59  Aligned_cols=37  Identities=32%  Similarity=0.443  Sum_probs=32.7

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRS   38 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (327)
                      |+...++|+|+|| |..|...+..|+++|++|.++.|+
T Consensus         2 ~~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           2 MMHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            4444678999996 999999999999999999999994

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.53  E-value=0.0038  Score=47.05  Aligned_cols=66  Identities=14%  Similarity=0.031  Sum_probs=46.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..++|.|.| .|.||+.+++.|..-|.+|++.++.......             ....       .+.++++++.+|+|+
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~-------------~~~~-------~~~l~ell~~sDii~  101 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLG-------------NATQ-------VQHLSDLLNMSDVVS  101 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCT-------------TCEE-------CSCHHHHHHHCSEEE
T ss_pred             cceEEEEee-cccchhhhhhhcccccceEeeccccccchhh-------------hhhh-------hhhHHHHHhhcccee
Confidence            467899998 6999999999999999999999883221111             1111       124667788889887


Q ss_pred             EccCCCC
Q 020334           84 HVAAPID   90 (327)
Q Consensus        84 h~a~~~~   90 (327)
                      .+.....
T Consensus       102 i~~plt~  108 (188)
T d1sc6a1         102 LHVPENP  108 (188)
T ss_dssp             ECCCSST
T ss_pred             ecccCCc
Confidence            7765443

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.52  E-value=0.0019  Score=45.09  Aligned_cols=33  Identities=30%  Similarity=0.261  Sum_probs=30.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      ++++++|+|| |+||..++..|.+.|.+|+++.|
T Consensus        19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~   51 (122)
T d1h6va2          19 CPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVR   51 (122)
T ss_dssp             CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEES
T ss_pred             CCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEe
Confidence            4678999996 99999999999999999999987

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.51  E-value=0.0028  Score=44.58  Aligned_cols=69  Identities=17%  Similarity=0.140  Sum_probs=51.2

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHH-hcCCCEEEE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAA-IAGCAGVIH   84 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vih   84 (327)
                      |.|+|.|. |-+|..+++.|.  +++|.+++. ++.......        ..++.++.||.++++.+.++ +++++.+|-
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~-d~~~~~~~~--------~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~   68 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAE-DENVRKKVL--------RSGANFVHGDPTRVSDLEKANVRGARAVIV   68 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEES-CTTHHHHHH--------HTTCEEEESCTTSHHHHHHTTCTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEc-chHHHHHHH--------hcCccccccccCCHHHHHHhhhhcCcEEEE
Confidence            46889985 889999999994  567777877 544333322        14789999999999988774 467888886


Q ss_pred             cc
Q 020334           85 VA   86 (327)
Q Consensus        85 ~a   86 (327)
                      +.
T Consensus        69 ~~   70 (129)
T d2fy8a1          69 NL   70 (129)
T ss_dssp             CC
T ss_pred             ec
Confidence            54

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.49  E-value=0.0016  Score=49.59  Aligned_cols=64  Identities=19%  Similarity=0.091  Sum_probs=45.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      +++|.|.| .|-||+.+++.|..-|.+|++.++ ........          ..        ....++.++++++|+|+.
T Consensus        43 gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~-~~~~~~~~----------~~--------~~~~~l~~~l~~sDii~~  102 (197)
T d1j4aa1          43 DQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDI-FRNPELEK----------KG--------YYVDSLDDLYKQADVISL  102 (197)
T ss_dssp             GSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SCCHHHHH----------TT--------CBCSCHHHHHHHCSEEEE
T ss_pred             CCeEEEec-ccccchhHHHhHhhhcccccccCc-cccccccc----------ce--------eeeccccccccccccccc
Confidence            67899999 699999999999999999999987 22111100          01        112346777888898877


Q ss_pred             ccCC
Q 020334           85 VAAP   88 (327)
Q Consensus        85 ~a~~   88 (327)
                      +...
T Consensus       103 ~~pl  106 (197)
T d1j4aa1         103 HVPD  106 (197)
T ss_dssp             CSCC
T ss_pred             cCCc
Confidence            7654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.47  E-value=0.0023  Score=44.16  Aligned_cols=33  Identities=24%  Similarity=0.172  Sum_probs=30.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .+++|+|.|| |++|..++..|.+.|.+|+++.|
T Consensus        20 ~p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~   52 (116)
T d1gesa2          20 LPERVAVVGA-GYIGVELGGVINGLGAKTHLFEM   52 (116)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCEEEEECC-ChhhHHHHHHhhccccEEEEEee
Confidence            4578999996 99999999999999999999998

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.47  E-value=0.0024  Score=44.38  Aligned_cols=32  Identities=25%  Similarity=0.388  Sum_probs=30.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .++++|.|| |++|..++..|.+.|.+|+.+.+
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~   61 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVET   61 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEee
Confidence            578999996 99999999999999999999999

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.44  E-value=0.0012  Score=49.50  Aligned_cols=39  Identities=23%  Similarity=0.411  Sum_probs=32.8

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL   46 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~   46 (327)
                      |||-|+| .|.+|.++++.|++.||+|++.+| ++++...+
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr-~~~~~~~l   40 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNR-TYSKSEEF   40 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECS-SHHHHHHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEEC-CHHHHHHH
Confidence            5799998 799999999999999999999999 54444333

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.43  E-value=0.0022  Score=47.64  Aligned_cols=72  Identities=17%  Similarity=0.187  Sum_probs=47.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+++|||.|+ |..+++++..|.+.|.+|+++.| +.++...+......   ...++.+  +..+.     ...++|+||
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nR-t~~ka~~l~~~~~~---~~~~~~~--~~~~~-----~~~~~dliI   84 (170)
T d1nyta1          17 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNR-TVSRAEELAKLFAH---TGSIQAL--SMDEL-----EGHEFDLII   84 (170)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-SHHHHHHHHHHTGG---GSSEEEC--CSGGG-----TTCCCSEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHhcccceEEEeccc-hHHHHHHHHHHHhh---ccccccc--ccccc-----cccccceee
Confidence            4689999996 88899999999999999999999 54444333222111   1123332  22221     124689999


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      ++..
T Consensus        85 N~Tp   88 (170)
T d1nyta1          85 NATS   88 (170)
T ss_dssp             ECCS
T ss_pred             cccc
Confidence            9864

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.41  E-value=0.0056  Score=45.21  Aligned_cols=76  Identities=16%  Similarity=0.156  Sum_probs=48.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh-hHHHHHh--cCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP-ESFDAAI--AGCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~--~~~d   80 (327)
                      ..+|+|+|++|-+|...++.+...| .+|+++++ ++.+....+.+-       --..+..+-.|. +.+.+..  .++|
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~-~~~~~~~~~~~G-------a~~~i~~~~~~~~~~~~~~~~~~~~d   99 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV-REEAVEAAKRAG-------ADYVINASMQDPLAEIRRITESKGVD   99 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES-SHHHHHHHHHHT-------CSEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCEEEEEeccccceeeeeeccccccccccccccc-chhhHHHHHHcC-------CceeeccCCcCHHHHHHHHhhcccch
Confidence            4689999999999999999998888 47888888 443333333321       113333333332 2223322  2589


Q ss_pred             EEEEccCC
Q 020334           81 GVIHVAAP   88 (327)
Q Consensus        81 ~vih~a~~   88 (327)
                      +|+.|++.
T Consensus       100 ~vid~~g~  107 (170)
T d1jvba2         100 AVIDLNNS  107 (170)
T ss_dssp             EEEESCCC
T ss_pred             hhhccccc
Confidence            99999873

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.40  E-value=0.002  Score=44.57  Aligned_cols=32  Identities=25%  Similarity=0.284  Sum_probs=30.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .++|+|.|| |++|..++..|.+.|.+|+++.|
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~   53 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFAR   53 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeeh
Confidence            578999996 99999999999999999999998

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.38  E-value=0.012  Score=42.96  Aligned_cols=93  Identities=25%  Similarity=0.310  Sum_probs=53.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CCeEEEE-EcCCCCC-cchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTT-VRSDPEH-KKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   81 (327)
                      ..||.|.|++|-+|+.+++.+.+. +.++.+. +|..... ......+...   ...-..+.-|+      ..+++.+|+
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~---~~~~~~~~~~~------~~~~~~~DV   74 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGA---GKTGVTVQSSL------DAVKDDFDV   74 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSS---SCCSCCEESCS------TTTTTSCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhcc---ccCCceeeccH------HHHhcccce
Confidence            568999999999999999999876 6676543 4422111 1111111111   01111122222      235567899


Q ss_pred             EEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEE
Q 020334           82 VIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFV  125 (327)
Q Consensus        82 vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v  125 (327)
                      ||.+.-+          +       ++..+++.|.+.+  ..+|
T Consensus        75 iIDFs~p----------~-------~~~~~~~~a~~~~--~~~V   99 (162)
T d1diha1          75 FIDFTRP----------E-------GTLNHLAFCRQHG--KGMV   99 (162)
T ss_dssp             EEECSCH----------H-------HHHHHHHHHHHTT--CEEE
T ss_pred             EEEeccH----------H-------HHHHHHHHHHhcc--ceeE
Confidence            9977542          1       2457778888877  4444

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.38  E-value=0.0051  Score=45.56  Aligned_cols=76  Identities=20%  Similarity=0.141  Sum_probs=54.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCC-------------------
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNAD-------------------   65 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-------------------   65 (327)
                      .-+|+|+|| |-.|.+-++....-|.+|.+++. ++.....++.+..        .++..+                   
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~-~~~~~~~l~~l~~--------~~i~~~~~~~~~~~~~~gyA~~~s~   98 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDV-RAATKEQVESLGG--------KFITVDDEAMKTAETAGGYAKEMGE   98 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-CSTTHHHHHHTTC--------EECCC--------------------
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEec-cHHHHHHHHHhhc--------ceEEEeccccccccccccchhhcCH
Confidence            348999996 99999999999999999999999 6555555554421        222111                   


Q ss_pred             ---CCChhHHHHHhcCCCEEEEccCCCC
Q 020334           66 ---LNDPESFDAAIAGCAGVIHVAAPID   90 (327)
Q Consensus        66 ---~~d~~~~~~~~~~~d~vih~a~~~~   90 (327)
                         ....+.+.+.+.++|.||-++-...
T Consensus        99 ~~~~~~~~~l~~~l~~aDlVI~talipG  126 (183)
T d1l7da1          99 EFRKKQAEAVLKELVKTDIAITTALIPG  126 (183)
T ss_dssp             ---CCHHHHHHHHHTTCSEEEECCCCTT
T ss_pred             HHHHHHHHHHHHHHHhhhhheeeeecCC
Confidence               1123456677889999998886544

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.0033  Score=43.99  Aligned_cols=33  Identities=21%  Similarity=0.323  Sum_probs=30.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .+++++|.|| |++|..++..|.+.|.+|+++.|
T Consensus        21 ~pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~   53 (125)
T d3grsa2          21 LPGRSVIVGA-GYIAVEMAGILSALGSKTSLMIR   53 (125)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             cCCEEEEEcC-CccHHHHHHHHhcCCcEEEEEee
Confidence            3579999996 99999999999999999999999

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.29  E-value=0.0032  Score=47.66  Aligned_cols=34  Identities=18%  Similarity=0.224  Sum_probs=30.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRS   38 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (327)
                      .++++.|.| .|-||+.+++.|..-|.+|++.++.
T Consensus        48 ~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~   81 (193)
T d1mx3a1          48 RGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPY   81 (193)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTT
T ss_pred             eCceEEEec-cccccccceeeeeccccceeeccCc
Confidence            467899999 5999999999999999999999883

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.27  E-value=0.0037  Score=43.56  Aligned_cols=32  Identities=28%  Similarity=0.273  Sum_probs=29.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .++|+|.|| |++|..++..|.+.|.+|+++.+
T Consensus        30 ~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~   61 (123)
T d1nhpa2          30 VNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDI   61 (123)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCEEEEECC-hHHHHHHHHHhhccceEEEEEEe
Confidence            578999996 99999999999999999999988

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.27  E-value=0.003  Score=43.47  Aligned_cols=33  Identities=27%  Similarity=0.342  Sum_probs=30.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .+++++|.|| |++|..++..|.+.|.+|+++.|
T Consensus        20 ~p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~   52 (115)
T d1lvla2          20 LPQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEA   52 (115)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHHTCEEEEECS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHhhcccceEEEee
Confidence            4689999996 99999999999999999999988

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.18  E-value=0.0079  Score=44.15  Aligned_cols=74  Identities=23%  Similarity=0.198  Sum_probs=45.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCC-hhHHHHHhcCCCEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLND-PESFDAAIAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~d~vi   83 (327)
                      ..+|+|.|+ |.+|...++.+...|++|+++++ ++.+....+.+       .-...+..+-.| .+.+.+...+.+.+|
T Consensus        28 g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~-~~~~~~~a~~~-------Ga~~~i~~~~~~~~~~~~~~~~g~~~~i   98 (166)
T d1llua2          28 GQWVAISGI-GGLGHVAVQYARAMGLHVAAIDI-DDAKLELARKL-------GASLTVNARQEDPVEAIQRDIGGAHGVL   98 (166)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHT-------TCSEEEETTTSCHHHHHHHHHSSEEEEE
T ss_pred             CCEEEEeec-cccHHHHHHHHHHcCCccceecc-hhhHHHhhhcc-------CccccccccchhHHHHHHHhhcCCcccc
Confidence            568999986 99999999988889999999999 54343333322       112333222222 233344444566666


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      -+++
T Consensus        99 ~~~~  102 (166)
T d1llua2          99 VTAV  102 (166)
T ss_dssp             ECCS
T ss_pred             cccc
Confidence            6654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.17  E-value=0.0039  Score=46.39  Aligned_cols=75  Identities=19%  Similarity=0.131  Sum_probs=47.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCC-hhHHHHHhc--CCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLND-PESFDAAIA--GCA   80 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~--~~d   80 (327)
                      ..+|+|.|+ |.+|...++.+...|. +|+++++ ++.+......+-       -..++.-.-.+ .+.+.++..  ++|
T Consensus        28 g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~-~~~r~~~a~~lG-------a~~~i~~~~~~~~~~v~~~t~g~G~D   98 (174)
T d1jqba2          28 GSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGS-RPICVEAAKFYG-------ATDILNYKNGHIEDQVMKLTNGKGVD   98 (174)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECC-CHHHHHHHHHHT-------CSEEECGGGSCHHHHHHHHTTTSCEE
T ss_pred             CCEEEEEcC-Ccchhhhhhhhhcccccccccccc-hhhhHHHHHhhC-------ccccccccchhHHHHHHHHhhccCcc
Confidence            568999986 9999999999988896 6898888 443333333321       11232211112 233444443  589


Q ss_pred             EEEEccCC
Q 020334           81 GVIHVAAP   88 (327)
Q Consensus        81 ~vih~a~~   88 (327)
                      +||.+++.
T Consensus        99 ~vid~~g~  106 (174)
T d1jqba2          99 RVIMAGGG  106 (174)
T ss_dssp             EEEECSSC
T ss_pred             eEEEccCC
Confidence            99999984

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.14  E-value=0.0036  Score=47.40  Aligned_cols=35  Identities=23%  Similarity=0.268  Sum_probs=32.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDP   40 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (327)
                      |-++|.|+|| |.+|+.++..++..|++|++.++ ++
T Consensus         3 ~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~-~~   37 (192)
T d1f0ya2           3 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQ-TE   37 (192)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-CH
T ss_pred             eeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEEC-Ch
Confidence            3589999997 99999999999999999999999 54

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.0046  Score=44.99  Aligned_cols=67  Identities=21%  Similarity=0.158  Sum_probs=45.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..|+++|.| .|.||+.+++.|...|.+|++..+ +|...  ++..      ..+.+.        ..+++++...|+||
T Consensus        23 ~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~-dp~~a--l~A~------~dG~~v--------~~~~~a~~~adivv   84 (163)
T d1li4a1          23 AGKVAVVAG-YGDVGKGCAQALRGFGARVIITEI-DPINA--LQAA------MEGYEV--------TTMDEACQEGNIFV   84 (163)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHHHH--HHHH------HTTCEE--------CCHHHHTTTCSEEE
T ss_pred             cCCEEEEec-cccccHHHHHHHHhCCCeeEeeec-ccchh--HHhh------cCceEe--------eehhhhhhhccEEE
Confidence            478899999 799999999999999999999988 44221  1111      012221        22556666778777


Q ss_pred             EccCC
Q 020334           84 HVAAP   88 (327)
Q Consensus        84 h~a~~   88 (327)
                      -+.+.
T Consensus        85 taTGn   89 (163)
T d1li4a1          85 TTTGC   89 (163)
T ss_dssp             ECSSC
T ss_pred             ecCCC
Confidence            66664

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=96.11  E-value=0.0036  Score=43.61  Aligned_cols=33  Identities=27%  Similarity=0.165  Sum_probs=30.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .+++++|+|| |++|..++..|.+.|.+|+++.|
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~   56 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEF   56 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEE
Confidence            4679999996 99999999999999999999998

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.10  E-value=0.0057  Score=46.50  Aligned_cols=63  Identities=17%  Similarity=0.077  Sum_probs=44.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      .++|.|.| .|-||+.+++.|..-|.+|++.++... ...           ...+.        ..++.++++.+|+|+.
T Consensus        45 ~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~-~~~-----------~~~~~--------~~~l~~l~~~~D~v~~  103 (199)
T d1dxya1          45 QQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPM-KGD-----------HPDFD--------YVSLEDLFKQSDVIDL  103 (199)
T ss_dssp             GSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC-SSC-----------CTTCE--------ECCHHHHHHHCSEEEE
T ss_pred             ceeeeeee-cccccccccccccccceeeeccCCccc-hhh-----------hcchh--------HHHHHHHHHhccccee
Confidence            57899999 599999999999999999999988322 111           01111        1236677777898876


Q ss_pred             ccCC
Q 020334           85 VAAP   88 (327)
Q Consensus        85 ~a~~   88 (327)
                      +...
T Consensus       104 ~~pl  107 (199)
T d1dxya1         104 HVPG  107 (199)
T ss_dssp             CCCC
T ss_pred             eecc
Confidence            6643

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=96.09  E-value=0.01  Score=43.77  Aligned_cols=37  Identities=14%  Similarity=0.167  Sum_probs=28.5

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDP   40 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~   40 (327)
                      |+  +.||.|.| +|++|+.+++.|.+. +.++.++...++
T Consensus         1 M~--kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~   38 (170)
T d1f06a1           1 MT--NIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRA   38 (170)
T ss_dssp             CC--CEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSS
T ss_pred             CC--cceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccc
Confidence            55  56899999 599999999999875 677776655343

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.09  E-value=0.0056  Score=44.65  Aligned_cols=58  Identities=19%  Similarity=0.184  Sum_probs=45.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+|+|+|.|-+..+|+.|+..|.++|+.|+......                              ..+.+..+++|+||
T Consensus        36 ~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t------------------------------~~l~~~~~~ADivI   85 (166)
T d1b0aa1          36 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT------------------------------KNLRHHVENADLLI   85 (166)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC------------------------------SCHHHHHHHCSEEE
T ss_pred             ccceEEEEeccccccHHHHHHHHHhhcccccccccc------------------------------chhHHHHhhhhHhh
Confidence            478999999999999999999999999998775511                              11344556789999


Q ss_pred             EccCCCCC
Q 020334           84 HVAAPIDI   91 (327)
Q Consensus        84 h~a~~~~~   91 (327)
                      .++|....
T Consensus        86 ~a~G~p~~   93 (166)
T d1b0aa1          86 VAVGKPGF   93 (166)
T ss_dssp             ECSCCTTC
T ss_pred             hhccCccc
Confidence            99986653

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.05  E-value=0.01  Score=43.97  Aligned_cols=75  Identities=12%  Similarity=0.120  Sum_probs=46.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEE-EEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCCh-hHHHHHhc-CCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVT-TTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDP-ESFDAAIA-GCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~-~~d~   81 (327)
                      ..+|+|.|+ |.+|...++.+...|.+++ +.++ ++.+.+..+.+       .-.+++.-+-.|. +.+.++.. ++|+
T Consensus        29 g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~-~~~k~~~a~~~-------Ga~~~i~~~~~~~~~~i~~~t~gg~D~   99 (174)
T d1f8fa2          29 ASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDI-VESRLELAKQL-------GATHVINSKTQDPVAAIKEITDGGVNF   99 (174)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEES-CHHHHHHHHHH-------TCSEEEETTTSCHHHHHHHHTTSCEEE
T ss_pred             CCEEEEeCC-CHHHhhhhhcccccccceeeeecc-HHHHHHHHHHc-------CCeEEEeCCCcCHHHHHHHHcCCCCcE
Confidence            468999997 9999999999988887655 4555 54443333333       1123443332232 22333332 5899


Q ss_pred             EEEccCC
Q 020334           82 VIHVAAP   88 (327)
Q Consensus        82 vih~a~~   88 (327)
                      ||.|.+.
T Consensus       100 vid~~G~  106 (174)
T d1f8fa2         100 ALESTGS  106 (174)
T ss_dssp             EEECSCC
T ss_pred             EEEcCCc
Confidence            9999873

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.04  E-value=0.0053  Score=45.27  Aligned_cols=40  Identities=20%  Similarity=0.325  Sum_probs=32.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchh
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDL   46 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~   46 (327)
                      +++|+|+|+ |..|++++..|.+.|. +|.++.| +.++...+
T Consensus        17 ~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR-~~~ka~~L   57 (167)
T d1npya1          17 NAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYAR-NVKTGQYL   57 (167)
T ss_dssp             TSCEEEECS-STTHHHHHHHHHHTTCCCEEEECS-CHHHHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecc-cHHHHHHH
Confidence            578999996 9999999999999996 7888888 55444443

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.01  E-value=0.006  Score=45.17  Aligned_cols=73  Identities=16%  Similarity=0.131  Sum_probs=48.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..++|+|.|+ |..+++++..|.+.+.+|+++.| +.++...+......   ...+..+..|-.       .+.++|+||
T Consensus        17 ~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR-~~~~a~~l~~~~~~---~~~~~~~~~~~~-------~~~~~diiI   84 (171)
T d1p77a1          17 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANR-TFSKTKELAERFQP---YGNIQAVSMDSI-------PLQTYDLVI   84 (171)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEES-SHHHHHHHHHHHGG---GSCEEEEEGGGC-------CCSCCSEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccCceeeeccc-hHHHHHHHHHHHhh---ccccchhhhccc-------cccccceee
Confidence            3678999996 88899999999988889999999 54444433222211   123444444322       135689999


Q ss_pred             EccCC
Q 020334           84 HVAAP   88 (327)
Q Consensus        84 h~a~~   88 (327)
                      ++...
T Consensus        85 N~tp~   89 (171)
T d1p77a1          85 NATSA   89 (171)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            99753

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=96.01  E-value=0.0049  Score=43.02  Aligned_cols=33  Identities=24%  Similarity=0.273  Sum_probs=30.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      ..++++|.|| |+||..++..|.+.|.+|+++.+
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~   57 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEM   57 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEe
Confidence            4679999996 99999999999999999999988

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.01  E-value=0.0036  Score=43.51  Aligned_cols=31  Identities=42%  Similarity=0.684  Sum_probs=29.1

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      ++++|.|| |++|..++..|.+.|.+|+++.|
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~   63 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHR   63 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEec
Confidence            68999996 99999999999999999999988

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.99  E-value=0.013  Score=42.89  Aligned_cols=58  Identities=16%  Similarity=0.140  Sum_probs=46.0

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      .+|+|+|.|-|.-+|+.|+..|+++|..|+....+.+                              .+.+..+++|+||
T Consensus        38 ~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~------------------------------~l~~~~~~aDivi   87 (170)
T d1a4ia1          38 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA------------------------------HLDEEVNKGDILV   87 (170)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS------------------------------SHHHHHTTCSEEE
T ss_pred             ccceEEEEecCCccchHHHHHHHhccCceEEEecccc------------------------------cHHHHHhhccchh
Confidence            4789999999999999999999999999988766221                              1334566789999


Q ss_pred             EccCCCCC
Q 020334           84 HVAAPIDI   91 (327)
Q Consensus        84 h~a~~~~~   91 (327)
                      .++|....
T Consensus        88 ~a~G~~~~   95 (170)
T d1a4ia1          88 VATGQPEM   95 (170)
T ss_dssp             ECCCCTTC
T ss_pred             hccccccc
Confidence            88886554

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.96  E-value=0.0052  Score=43.43  Aligned_cols=32  Identities=25%  Similarity=0.407  Sum_probs=30.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .++|+|.|| |++|..++..|.+.|.+|+++.+
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~   66 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDT   66 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeee
Confidence            578999996 99999999999999999999998

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=95.91  E-value=0.0013  Score=49.00  Aligned_cols=115  Identities=17%  Similarity=0.068  Sum_probs=65.1

Q ss_pred             CCeEEEeCCcchhHHH--HHHHHHHC----CCeEEEEEcCCCCCcchhh----hhhCCCCCCCCeEEEeCCCCChhHHHH
Q 020334            5 KGKVCVTGGTGFIGSW--LIMRLLDH----GYFVTTTVRSDPEHKKDLS----FLTNLPGASERLQIFNADLNDPESFDA   74 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~D~~d~~~~~~   74 (327)
                      ++||.|+|| |.+|+.  ++..|+..    +.++..+++ ++++.....    +.....  ....++..     ..+..+
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Di-d~~~~~~~~~~~~~~~~~~--~~~~~i~~-----~td~~e   72 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDI-DEERLDAILTIAKKYVEEV--GADLKFEK-----TMNLDD   72 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECS-CHHHHHHHHHHHHHHHHHT--TCCCEEEE-----ESCHHH
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeC-CchHHHHHHHHHHHHHHhc--CCCeEEEE-----eCChhh
Confidence            578999996 988875  34445432    468999999 543322211    111110  11222221     123556


Q ss_pred             HhcCCCEEEEccCCCCCCCCchHH-------------------------HHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           75 AIAGCAGVIHVAAPIDIDGKETEE-------------------------VMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        75 ~~~~~d~vih~a~~~~~~~~~~~~-------------------------~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      .+.++|+|+.+++...........                         .....|+...+.+++.+++..+-..++.+|
T Consensus        73 aL~dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1          73 VIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             HHTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cccCCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence            788999999998643211000000                         002347888899999999887555666655

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.86  E-value=0.0063  Score=45.89  Aligned_cols=67  Identities=15%  Similarity=0.075  Sum_probs=44.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      .+++.|.| .|-||+.+++.|...|.+|++.++.......... .        .       ....+++.++++.+|+|+-
T Consensus        47 g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-~--------~-------~~~~~~l~~ll~~sD~v~l  109 (191)
T d1gdha1          47 NKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS-Y--------Q-------ATFHDSLDSLLSVSQFFSL  109 (191)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH-H--------T-------CEECSSHHHHHHHCSEEEE
T ss_pred             ccceEEee-cccchHHHHHHHHhhccccccccccccccchhhc-c--------c-------ccccCCHHHHHhhCCeEEe
Confidence            58899999 5999999999999999999998873221111110 0        0       0111346677778888776


Q ss_pred             ccCC
Q 020334           85 VAAP   88 (327)
Q Consensus        85 ~a~~   88 (327)
                      +...
T Consensus       110 ~~pl  113 (191)
T d1gdha1         110 NAPS  113 (191)
T ss_dssp             CCCC
T ss_pred             cCCC
Confidence            6544

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.82  E-value=0.027  Score=36.93  Aligned_cols=71  Identities=21%  Similarity=0.246  Sum_probs=46.8

Q ss_pred             CCCeEEEeCCcchhH-HHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            4 QKGKVCVTGGTGFIG-SWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         4 ~~~~ilVtGatG~iG-~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      ..++|.++|- |.+| ++|++.|.++|++|.+.|+.......   .+.+     .++.+..+.-.+      .+.++|.|
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~---~L~~-----~Gi~v~~g~~~~------~i~~~d~v   71 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQ---RLAQ-----AGAKIYIGHAEE------HIEGASVV   71 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHH---HHHH-----TTCEEEESCCGG------GGTTCSEE
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhh---HHHH-----CCCeEEECCccc------cCCCCCEE
Confidence            3578999875 4455 67899999999999999994332222   2222     256665544422      24578999


Q ss_pred             EEccCCC
Q 020334           83 IHVAAPI   89 (327)
Q Consensus        83 ih~a~~~   89 (327)
                      |...|..
T Consensus        72 V~S~AI~   78 (96)
T d1p3da1          72 VVSSAIK   78 (96)
T ss_dssp             EECTTSC
T ss_pred             EECCCcC
Confidence            9887753

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.76  E-value=0.012  Score=43.68  Aligned_cols=75  Identities=13%  Similarity=0.067  Sum_probs=46.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEE-eCCCCC-hhHHHHHh--cCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIF-NADLND-PESFDAAI--AGC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~d-~~~~~~~~--~~~   79 (327)
                      ..+|+|.|+ |.+|...+..+...| .+|+++++ ++++......+-       ....+ ..+..+ .....+..  .++
T Consensus        29 GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~-~~~k~~~a~~~G-------a~~~i~~~~~~~~~~~~~~~~~~~G~   99 (176)
T d2jhfa2          29 GSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDI-NKDKFAKAKEVG-------ATECVNPQDYKKPIQEVLTEMSNGGV   99 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS-CGGGHHHHHHTT-------CSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred             CCEEEEECC-CCcHHHHHHHHHHcCCceEEeecC-cHHHHHHHHHhC-------CeeEEecCCchhHHHHHHHHHhcCCC
Confidence            468999998 558999999999887 57888888 554444333321       11222 222222 22222333  269


Q ss_pred             CEEEEccCC
Q 020334           80 AGVIHVAAP   88 (327)
Q Consensus        80 d~vih~a~~   88 (327)
                      |++|.+.|.
T Consensus       100 D~vid~~G~  108 (176)
T d2jhfa2         100 DFSFEVIGR  108 (176)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEecCCc
Confidence            999999874

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.71  E-value=0.0086  Score=45.03  Aligned_cols=67  Identities=18%  Similarity=0.055  Sum_probs=44.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      .+++.|.| .|-||+.+++.|...|.+|...++. ..........        +       +....++.++++++|+|+-
T Consensus        44 ~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~-~~~~~~~~~~--------~-------~~~~~~l~~~l~~sD~v~~  106 (188)
T d2naca1          44 AMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRH-RLPESVEKEL--------N-------LTWHATREDMYPVCDVVTL  106 (188)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSS-CCCHHHHHHH--------T-------CEECSSHHHHGGGCSEEEE
T ss_pred             ccceeecc-ccccchhhhhhhhccCceEEEEeec-cccccccccc--------c-------ccccCCHHHHHHhccchhh
Confidence            57899998 5999999999999999999999983 2222111110        1       1112345667777887766


Q ss_pred             ccCC
Q 020334           85 VAAP   88 (327)
Q Consensus        85 ~a~~   88 (327)
                      +...
T Consensus       107 ~~pl  110 (188)
T d2naca1         107 NCPL  110 (188)
T ss_dssp             CSCC
T ss_pred             cccc
Confidence            5543

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.66  E-value=0.012  Score=43.51  Aligned_cols=75  Identities=13%  Similarity=0.060  Sum_probs=44.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCe-EEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeC-CC-CChhHHHHHh--cCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYF-VTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA-DL-NDPESFDAAI--AGC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-D~-~d~~~~~~~~--~~~   79 (327)
                      ..+|||.|+ |.+|...++.+...|.. |+++++ ++.+....+.+-       -...+.. +- .+.....+..  .++
T Consensus        29 G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~-~~~k~~~ak~lG-------a~~~i~~~~~~~~~~~~~~~~~~~g~   99 (176)
T d2fzwa2          29 GSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDI-NKDKFARAKEFG-------ATECINPQDFSKPIQEVLIEMTDGGV   99 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECS-CGGGHHHHHHHT-------CSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred             CCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcc-cHHHHHHHHHhC-------CcEEEeCCchhhHHHHHHHHHcCCCC
Confidence            468999998 56899999999888864 666655 555544444331       1122221 11 1222222222  268


Q ss_pred             CEEEEccCC
Q 020334           80 AGVIHVAAP   88 (327)
Q Consensus        80 d~vih~a~~   88 (327)
                      |+||.+.|.
T Consensus       100 D~vid~~G~  108 (176)
T d2fzwa2         100 DYSFECIGN  108 (176)
T ss_dssp             SEEEECSCC
T ss_pred             cEeeecCCC
Confidence            999999873

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.61  E-value=0.0098  Score=44.25  Aligned_cols=33  Identities=27%  Similarity=0.243  Sum_probs=31.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .+|+|+|+|| |..|...+..|+++||+|+++.+
T Consensus        42 ~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~   74 (179)
T d1ps9a3          42 QKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDA   74 (179)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEES
T ss_pred             CCcEEEEECc-cHHHHHHHHHHHhhccceEEEec
Confidence            4689999996 99999999999999999999999

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.58  E-value=0.017  Score=37.30  Aligned_cols=69  Identities=20%  Similarity=0.186  Sum_probs=45.1

Q ss_pred             CeEEEeCCcchhHH-HHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEEE
Q 020334            6 GKVCVTGGTGFIGS-WLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVIH   84 (327)
Q Consensus         6 ~~ilVtGatG~iG~-~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   84 (327)
                      |||.++|- |.+|. .|++.|.++|+.|.+.|+..++...   .|.+     .++++..+.  +++.    +.++|.||.
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~---~L~~-----~Gi~i~~gh--~~~~----i~~~d~vV~   66 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTA---YLRK-----LGIPIFVPH--SADN----WYDPDLVIK   66 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HHHH-----TTCCEESSC--CTTS----CCCCSEEEE
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHH---HHHH-----CCCeEEeee--cccc----cCCCCEEEE
Confidence            67888885 44554 7899999999999999984332222   3332     255555432  2221    357899998


Q ss_pred             ccCCC
Q 020334           85 VAAPI   89 (327)
Q Consensus        85 ~a~~~   89 (327)
                      ..|..
T Consensus        67 SsAI~   71 (89)
T d1j6ua1          67 TPAVR   71 (89)
T ss_dssp             CTTCC
T ss_pred             ecCcC
Confidence            88864

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.53  E-value=0.012  Score=44.03  Aligned_cols=67  Identities=18%  Similarity=0.154  Sum_probs=45.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..+++.|.| .|.||+.+++.|..-|.+|++.++ .........         ..+++        .++.++++++|+|+
T Consensus        43 ~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~-~~~~~~~~~---------~~~~~--------~~l~ell~~sDiv~  103 (184)
T d1ygya1          43 FGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDP-YVSPARAAQ---------LGIEL--------LSLDDLLARADFIS  103 (184)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECT-TSCHHHHHH---------HTCEE--------CCHHHHHHHCSEEE
T ss_pred             cceeeeecc-ccchhHHHHHHhhhccceEEeecC-CCChhHHhh---------cCcee--------ccHHHHHhhCCEEE
Confidence            357888888 599999999999999999999987 322211111         01111        23567777889877


Q ss_pred             EccCCC
Q 020334           84 HVAAPI   89 (327)
Q Consensus        84 h~a~~~   89 (327)
                      -+....
T Consensus       104 ~~~Plt  109 (184)
T d1ygya1         104 VHLPKT  109 (184)
T ss_dssp             ECCCCS
T ss_pred             EcCCCC
Confidence            666543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=95.53  E-value=0.017  Score=42.75  Aligned_cols=75  Identities=16%  Similarity=0.089  Sum_probs=47.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCC--hhHHHHHh--cCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLND--PESFDAAI--AGC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~--~~~   79 (327)
                      +.+|+|+|+ |.||...++.+...|. .|++.++ ++.+....+.+-       -...+...-.+  .+.+.+..  .++
T Consensus        29 G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~-~~~r~~~a~~~G-------a~~~i~~~~~~~~~~~~~~~~~~~G~   99 (174)
T d1e3ia2          29 GSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDI-NGEKFPKAKALG-------ATDCLNPRELDKPVQDVITELTAGGV   99 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS-CGGGHHHHHHTT-------CSEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred             CCEEEEECC-ChHHHHHHHHHHHhCCceeeeecc-chHHHHHHHHhC-------CCcccCCccchhhhhhhHhhhhcCCC
Confidence            468999985 9999999999999997 5777777 554444433331       11232221112  22233322  379


Q ss_pred             CEEEEccCC
Q 020334           80 AGVIHVAAP   88 (327)
Q Consensus        80 d~vih~a~~   88 (327)
                      |+||.|.|.
T Consensus       100 d~vie~~G~  108 (174)
T d1e3ia2         100 DYSLDCAGT  108 (174)
T ss_dssp             SEEEESSCC
T ss_pred             cEEEEeccc
Confidence            999999983

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.50  E-value=0.018  Score=42.20  Aligned_cols=81  Identities=15%  Similarity=0.037  Sum_probs=52.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCC--CChhHHHHHhcCCCE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL--NDPESFDAAIAGCAG   81 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~d~~~~~~~~~~~d~   81 (327)
                      .+|+++|.|-|.-+|+.++..|+++|..|+....+..........+.       -......|+  ..++.+.+....+|+
T Consensus        28 ~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~lk~~~~~aDI  100 (171)
T d1edza1          28 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK-------LNKHHVEDLGEYSEDLLKKCSLDSDV  100 (171)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS-------CCCCEEEEEEECCHHHHHHHHHHCSE
T ss_pred             CCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccccccccee-------eeeeccccccccchhHHhhccccCCE
Confidence            46899999999999999999999999999877652211110000000       000011111  345567777778999


Q ss_pred             EEEccCCCCC
Q 020334           82 VIHVAAPIDI   91 (327)
Q Consensus        82 vih~a~~~~~   91 (327)
                      ||..+|..++
T Consensus       101 vIsavG~p~~  110 (171)
T d1edza1         101 VITGVPSENY  110 (171)
T ss_dssp             EEECCCCTTC
T ss_pred             EEEccCCCcc
Confidence            9998886553

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.46  E-value=0.091  Score=36.70  Aligned_cols=29  Identities=17%  Similarity=0.333  Sum_probs=24.1

Q ss_pred             eEEEeCCcchhHHHHHHHHHHC-CCeEEEE
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDH-GYFVTTT   35 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~-g~~V~~~   35 (327)
                      ||.|.|++|-.|+.+++.+.+. ++++.+.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~   30 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAE   30 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence            6999999999999999998765 5676543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.43  E-value=0.011  Score=44.62  Aligned_cols=73  Identities=15%  Similarity=0.063  Sum_probs=46.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCC--Ch-hHHHHHhc--C
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLN--DP-ESFDAAIA--G   78 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--d~-~~~~~~~~--~   78 (327)
                      ..+|||.|+ |-+|...+..+...|. +|+++++ ++.+......+        +...+. |..  +. +.+.++..  +
T Consensus        26 G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~-~~~rl~~a~~~--------Ga~~~~-~~~~~~~~~~i~~~t~g~g   94 (195)
T d1kola2          26 GSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDL-NPARLAHAKAQ--------GFEIAD-LSLDTPLHEQIAALLGEPE   94 (195)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEES-CHHHHHHHHHT--------TCEEEE-TTSSSCHHHHHHHHHSSSC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhhcccceeeecc-cchhhHhhhhc--------cccEEE-eCCCcCHHHHHHHHhCCCC
Confidence            568999986 9999888888877776 6888877 44333333222        233322 222  22 23444443  5


Q ss_pred             CCEEEEccCC
Q 020334           79 CAGVIHVAAP   88 (327)
Q Consensus        79 ~d~vih~a~~   88 (327)
                      +|++|.+.|.
T Consensus        95 ~D~vid~vG~  104 (195)
T d1kola2          95 VDCAVDAVGF  104 (195)
T ss_dssp             EEEEEECCCT
T ss_pred             cEEEEECccc
Confidence            8999999884

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.43  E-value=0.019  Score=42.32  Aligned_cols=75  Identities=15%  Similarity=0.041  Sum_probs=46.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc--CCCE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA--GCAG   81 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~   81 (327)
                      ..+|+|.|+ |.+|...++.+...|. .|+++++ ++.+....+.+       ...+.+..+-.+.+.+.+...  ++|+
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~-~~~k~~~~~~~-------ga~~~i~~~~~~~~~~~~~~~~~g~d~  103 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDV-KEEKLKLAERL-------GADHVVDARRDPVKQVMELTRGRGVNV  103 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEES-SHHHHHHHHHT-------TCSEEEETTSCHHHHHHHHTTTCCEEE
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccc-hhHHHHHHhhc-------ccceeecCcccHHHHHHHhhCCCCceE
Confidence            468999885 9999999999988775 5666667 44333333322       222444333223333444332  5899


Q ss_pred             EEEccCC
Q 020334           82 VIHVAAP   88 (327)
Q Consensus        82 vih~a~~   88 (327)
                      ||.+++.
T Consensus       104 vid~~g~  110 (172)
T d1h2ba2         104 AMDFVGS  110 (172)
T ss_dssp             EEESSCC
T ss_pred             EEEecCc
Confidence            9999984

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.41  E-value=0.019  Score=42.54  Aligned_cols=75  Identities=12%  Similarity=0.059  Sum_probs=49.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEe-CCCCC-hhHHHHHh--cCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFN-ADLND-PESFDAAI--AGC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~D~~d-~~~~~~~~--~~~   79 (327)
                      ..+|+|+|+ |.+|...++.+...| .+|+++++ ++++.+..+.+-.      . ..+. -|-.+ .+.+.+..  .++
T Consensus        30 g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~-~~~kl~~Ak~~GA------~-~~in~~~~~~~~~~~~~~~~g~G~  100 (176)
T d1d1ta2          30 GSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDL-NKDKFEKAMAVGA------T-ECISPKDSTKPISEVLSEMTGNNV  100 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS-CGGGHHHHHHHTC------S-EEECGGGCSSCHHHHHHHHHTSCC
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceEEEecC-cHHHHHHHHhcCC------c-EEECccccchHHHHHHHHhccccc
Confidence            467999986 999999999999998 47999999 5555544444321      1 2221 22222 23333333  369


Q ss_pred             CEEEEccCC
Q 020334           80 AGVIHVAAP   88 (327)
Q Consensus        80 d~vih~a~~   88 (327)
                      |++|.+.+.
T Consensus       101 d~vi~~~g~  109 (176)
T d1d1ta2         101 GYTFEVIGH  109 (176)
T ss_dssp             CEEEECSCC
T ss_pred             eEEEEeCCc
Confidence            999999874

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.33  E-value=0.037  Score=40.76  Aligned_cols=75  Identities=15%  Similarity=0.024  Sum_probs=47.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCC--hhHHHHHhc--CC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLND--PESFDAAIA--GC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~--~~   79 (327)
                      ..+|+|.|+ |.+|...++.+...|. +|+++++ ++.+....+.+       .-...+...-.|  .+.......  ++
T Consensus        28 G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~-~~~kl~~a~~l-------Ga~~~i~~~~~d~~~~~~~~~~~~~G~   98 (174)
T d1p0fa2          28 GSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGT-HKDKFPKAIEL-------GATECLNPKDYDKPIYEVICEKTNGGV   98 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECS-CGGGHHHHHHT-------TCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceeeccCC-hHHHHHHHHHc-------CCcEEEcCCCchhHHHHHHHHhcCCCC
Confidence            568999996 9999999999998886 6888888 54444433332       112232211122  222333332  68


Q ss_pred             CEEEEccCC
Q 020334           80 AGVIHVAAP   88 (327)
Q Consensus        80 d~vih~a~~   88 (327)
                      |+||.+.+.
T Consensus        99 d~vid~~g~  107 (174)
T d1p0fa2          99 DYAVECAGR  107 (174)
T ss_dssp             SEEEECSCC
T ss_pred             cEEEEcCCC
Confidence            999999874

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.32  E-value=0.0088  Score=44.93  Aligned_cols=34  Identities=21%  Similarity=0.178  Sum_probs=30.5

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRS   38 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~   38 (327)
                      .++||+|+|| |..|...+..|.+.|+ +|+++.|+
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~   37 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQ   37 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEec
Confidence            3689999996 9999999999999998 59999983

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=95.31  E-value=0.002  Score=47.55  Aligned_cols=116  Identities=15%  Similarity=0.117  Sum_probs=63.5

Q ss_pred             CCeEEEeCCcchhHHH-HHHHHHHC-----CCeEEEEEcCCCCCcchhhhhhCCC--CCCCCeEEEeCCCCChhHHHHHh
Q 020334            5 KGKVCVTGGTGFIGSW-LIMRLLDH-----GYFVTTTVRSDPEHKKDLSFLTNLP--GASERLQIFNADLNDPESFDAAI   76 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~-l~~~L~~~-----g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~   76 (327)
                      ..||.|+|| |.+|.. ++..|+..     +.+|..++. ++++...........  ......+....     .+..+.+
T Consensus         3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Di-d~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~eal   75 (167)
T d1u8xx1           3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDN-DKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEEAF   75 (167)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECS-CHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHHHH
T ss_pred             CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcC-ChhHHHHHHHHHHHHHHHhCCCcceEec-----CChhhcc
Confidence            457999998 445554 44555543     247888888 544433211111000  00012222211     1345678


Q ss_pred             cCCCEEEEccCCCCCCCCchHHHH--------------------HHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           77 AGCAGVIHVAAPIDIDGKETEEVM--------------------TQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        77 ~~~d~vih~a~~~~~~~~~~~~~~--------------------~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      +++|+||.+|+.........+ +.                    ...|+...+.+++.+++..+-..++.+|
T Consensus        76 ~~AD~Vvitag~~~~~g~~rd-~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~~T  146 (167)
T d1u8xx1          76 TDVDFVMAHIRVGKYAMRALD-EQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYS  146 (167)
T ss_dssp             SSCSEEEECCCTTHHHHHHHH-HHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCCCEEEECCCcCCCCceeHH-HhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            899999999986432211111 11                    2245677788888888887556777666

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.31  E-value=0.013  Score=40.43  Aligned_cols=32  Identities=22%  Similarity=0.093  Sum_probs=29.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .++|+|.|| |++|..++..|.+.|.+|+++.|
T Consensus        22 ~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~   53 (121)
T d1mo9a2          22 GSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVR   53 (121)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcchhheEeec
Confidence            578999995 99999999999999999999998

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.29  E-value=0.0068  Score=44.75  Aligned_cols=120  Identities=9%  Similarity=-0.049  Sum_probs=63.4

Q ss_pred             CCeEEEeCC-cchhHHHHHHHHHHC----CCeEEEEEcCCCCC--cchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc
Q 020334            5 KGKVCVTGG-TGFIGSWLIMRLLDH----GYFVTTTVRSDPEH--KKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA   77 (327)
Q Consensus         5 ~~~ilVtGa-tG~iG~~l~~~L~~~----g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   77 (327)
                      ++||.|+|| +.+.+..++..+...    ..++..+++ ++..  ...............+.......-+|   ..+.++
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di-~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td---~~~al~   76 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDI-PEGKEKLEIVGALAKRMVEKAGVPIEIHLTLD---RRRALD   76 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECC-GGGHHHHHHHHHHHHHHHHHTTCCCEEEEESC---HHHHHT
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcC-CccHHHHHHHHHHHHHHHHhcCCCceeeecCC---chhhcC
Confidence            368999997 334555555555443    237888877 3322  12222111000000011111111223   345678


Q ss_pred             CCCEEEEccCCCCCCCCc-------------------hHHHHHHHHHhHHHHHHHHHHhcCCccEEEEec
Q 020334           78 GCAGVIHVAAPIDIDGKE-------------------TEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTS  128 (327)
Q Consensus        78 ~~d~vih~a~~~~~~~~~-------------------~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S  128 (327)
                      ++|+||.+|+........                   ..-.....|+...+.+++.+++..+-..++.+|
T Consensus        77 gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vt  146 (169)
T d1s6ya1          77 GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFT  146 (169)
T ss_dssp             TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence            999999999854311000                   001234568888999999999988556666555

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.28  E-value=0.053  Score=37.29  Aligned_cols=73  Identities=14%  Similarity=0.099  Sum_probs=51.5

Q ss_pred             CCeEEEeCC----------cchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHH
Q 020334            5 KGKVCVTGG----------TGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDA   74 (327)
Q Consensus         5 ~~~ilVtGa----------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~   74 (327)
                      .+||||+|+          --+-+.+.+++|.+.|++++.+.- +|...+.-..+         ..-+..+-...+.+.+
T Consensus         7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~-NP~TVstd~d~---------aD~lYfePlt~e~v~~   76 (127)
T d1a9xa3           7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNS-NPATIMTDPEM---------ADATYIEPIHWEVVRK   76 (127)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECS-CTTCGGGCGGG---------SSEEECSCCCHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecC-chHhhhcChhh---------cceeeeecCCHHHHHH
Confidence            479999998          447899999999999999998877 65443322111         1223344556677888


Q ss_pred             Hhc--CCCEEEEccC
Q 020334           75 AIA--GCAGVIHVAA   87 (327)
Q Consensus        75 ~~~--~~d~vih~a~   87 (327)
                      +++  ++|.|+-..|
T Consensus        77 Ii~~E~pd~il~~~G   91 (127)
T d1a9xa3          77 IIEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHHCCSEEECSSS
T ss_pred             HHHHhCcCCeEEEee
Confidence            775  7999986665

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.24  E-value=0.0049  Score=44.68  Aligned_cols=36  Identities=25%  Similarity=0.394  Sum_probs=30.1

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHK   43 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~   43 (327)
                      |||.++|+ |-+|+++++.|++.| ++|++.+| ++++.
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r-~~~~~   37 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANR-GAEKR   37 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECS-SHHHH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeC-ChhHH
Confidence            57999985 999999999998876 89999999 44333

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.21  E-value=0.021  Score=41.75  Aligned_cols=73  Identities=16%  Similarity=0.120  Sum_probs=45.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCC-CC-hhHHHHHhcCCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADL-ND-PESFDAAIAGCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~d-~~~~~~~~~~~d~v   82 (327)
                      ..+|+|.|+ |-+|...++.+...|++|+++++ ++.+....+.+        +...+.... .| .+.+.+...+.+.+
T Consensus        28 g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~-~~~r~~~~k~~--------Ga~~~~~~~~~~~~~~~~~~~~~~~~~   97 (168)
T d1rjwa2          28 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDI-GDEKLELAKEL--------GADLVVNPLKEDAAKFMKEKVGGVHAA   97 (168)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECS-CHHHHHHHHHT--------TCSEEECTTTSCHHHHHHHHHSSEEEE
T ss_pred             CCEEEEeec-ccchhhhhHHHhcCCCeEeccCC-CHHHhhhhhhc--------CcceecccccchhhhhcccccCCCceE
Confidence            568999875 88999999999999999999988 44343333322        222222211 12 23344555666777


Q ss_pred             EEccC
Q 020334           83 IHVAA   87 (327)
Q Consensus        83 ih~a~   87 (327)
                      |.+++
T Consensus        98 v~~~~  102 (168)
T d1rjwa2          98 VVTAV  102 (168)
T ss_dssp             EESSC
T ss_pred             EeecC
Confidence            76664

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.13  E-value=0.012  Score=48.24  Aligned_cols=33  Identities=24%  Similarity=0.377  Sum_probs=30.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRS   38 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (327)
                      +|+|+|+|| |+-|...+..|+++|++|.++.++
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~   34 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQR   34 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECC
Confidence            588999995 999999999999999999999883

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=95.06  E-value=0.01  Score=47.20  Aligned_cols=30  Identities=27%  Similarity=0.304  Sum_probs=28.4

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCCeEEEEEcC
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRS   38 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (327)
                      |+|+|| |..|..++.+|+++|++|+++.++
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~   36 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESG   36 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            999996 999999999999999999999984

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=95.02  E-value=0.031  Score=38.74  Aligned_cols=94  Identities=14%  Similarity=0.066  Sum_probs=59.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHH-CCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-CCCEE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLD-HGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-GCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~v   82 (327)
                      +.+|+|.|| |.+|..|++++.. .++++.++.-+++......         -.++..+     +++.+.++.. .++.+
T Consensus         3 ~~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~---------I~Gi~V~-----~~~~l~~~~~~~i~ia   67 (126)
T d2dt5a2           3 KWGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGRP---------VRGGVIE-----HVDLLPQRVPGRIEIA   67 (126)
T ss_dssp             CEEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCE---------ETTEEEE-----EGGGHHHHSTTTCCEE
T ss_pred             CceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCE---------ECCEEEe-----cHHHHHHHHhhcccEE
Confidence            358999996 9999999998753 4789888877555332211         1345544     2344666554 45655


Q ss_pred             EEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccce
Q 020334           83 IHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGS  131 (327)
Q Consensus        83 ih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~  131 (327)
                      +-+...          +       ....+++.|.+.+ ++.+..++...
T Consensus        68 i~~i~~----------~-------~~~~I~d~l~~~g-Ik~I~~f~~~~   98 (126)
T d2dt5a2          68 LLTVPR----------E-------AAQKAADLLVAAG-IKGILNFAPVV   98 (126)
T ss_dssp             EECSCH----------H-------HHHHHHHHHHHHT-CCEEEECSSSC
T ss_pred             EEeCCH----------H-------HHHHHHHHHHHcC-CCEEeecCcee
Confidence            544331          1       1346777788778 88888776654

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.94  E-value=0.011  Score=44.41  Aligned_cols=34  Identities=15%  Similarity=0.211  Sum_probs=31.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDP   40 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   40 (327)
                      -++|.|+|| |.+|+.++..++..|++|++.++ ++
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~-~~   37 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDI-NE   37 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECS-SH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEEC-CH
Confidence            468999997 99999999999999999999999 44

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.89  E-value=0.018  Score=45.32  Aligned_cols=33  Identities=27%  Similarity=0.343  Sum_probs=30.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      ..+||+|+|| |..|..++..|+++|++|+++.|
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er   35 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYER   35 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeC
Confidence            3578999996 99999999999999999999998

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.82  E-value=0.11  Score=35.11  Aligned_cols=74  Identities=18%  Similarity=0.134  Sum_probs=49.9

Q ss_pred             CCCeEEEeCCc----------chhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHH
Q 020334            4 QKGKVCVTGGT----------GFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFD   73 (327)
Q Consensus         4 ~~~~ilVtGat----------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~   73 (327)
                      ..++|||+|+.          -+-+.+.+++|.+.|++++.+.- +|...+.-..         -..-+..+-...+.+.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~-NPeTVstd~d---------~aD~lYfeplt~e~v~   72 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC-NPETVSTDYD---------TSDRLYFEPVTLEDVL   72 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECC-CTTSSTTSTT---------SSSEEECCCCSHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEec-ChhhhhcChh---------hcCceEEccCCHHHHH
Confidence            35799999973          37899999999999999998877 6544332111         1122223344567777


Q ss_pred             HHhc--CCCEEEEccC
Q 020334           74 AAIA--GCAGVIHVAA   87 (327)
Q Consensus        74 ~~~~--~~d~vih~a~   87 (327)
                      ++++  ++|.|+-..|
T Consensus        73 ~Ii~~E~p~~ii~~~G   88 (121)
T d1a9xa4          73 EIVRIEKPKGVIVQYG   88 (121)
T ss_dssp             HHHHHHCCSEEECSSS
T ss_pred             HHHHHhCCCEEEeehh
Confidence            7664  7898876554

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.81  E-value=0.077  Score=37.33  Aligned_cols=33  Identities=24%  Similarity=0.325  Sum_probs=29.4

Q ss_pred             CCeEEEeCCc---chhHHHHHHHHHHCCCeEEEEEc
Q 020334            5 KGKVCVTGGT---GFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGat---G~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .++|.|.|+|   +-.|..+++.|.+.||+|+.+..
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP   54 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNP   54 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECC
Confidence            5789999998   78999999999999999887743

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.80  E-value=0.08  Score=42.15  Aligned_cols=33  Identities=18%  Similarity=0.150  Sum_probs=29.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      ..++|+|-| .|-+|+++++.|.+.|.+|++++-
T Consensus        35 ~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          35 GDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEc
Confidence            357899999 599999999999999999998765

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=94.77  E-value=0.092  Score=40.78  Aligned_cols=33  Identities=24%  Similarity=0.400  Sum_probs=29.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      ..++|+|-| .|-+|+++++.|.+.|.+|++++-
T Consensus        30 ~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          30 EGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            468999998 699999999999999999988775

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.72  E-value=0.011  Score=44.76  Aligned_cols=68  Identities=18%  Similarity=0.132  Sum_probs=45.6

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhc-CCCE
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIA-GCAG   81 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~   81 (327)
                      ...++|+|-| .|-+|+++++.|.+.|.+|++.+. ++..   +.+...     .+.+.+     +.+   +++. ++|+
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~-d~~~---~~~~~~-----~g~~~~-----~~~---~~~~~~~DI   86 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADT-DTER---VAHAVA-----LGHTAV-----ALE---DVLSTPCDV   86 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHHH---HHHHHH-----TTCEEC-----CGG---GGGGCCCSE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecc-hHHH---HHHHHh-----hccccc-----Ccc---cccccccee
Confidence            3468999998 699999999999999999998877 3322   222211     122222     222   2444 7999


Q ss_pred             EEEccCC
Q 020334           82 VIHVAAP   88 (327)
Q Consensus        82 vih~a~~   88 (327)
                      ++-||..
T Consensus        87 ~iPcA~~   93 (201)
T d1c1da1          87 FAPCAMG   93 (201)
T ss_dssp             EEECSCS
T ss_pred             eeccccc
Confidence            9999853

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.71  E-value=0.016  Score=41.74  Aligned_cols=33  Identities=21%  Similarity=0.397  Sum_probs=30.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .+++|||+|| |.+|..-++.|++.|.+|+++..
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            4789999997 99999999999999999999865

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.65  E-value=0.014  Score=44.09  Aligned_cols=30  Identities=30%  Similarity=0.297  Sum_probs=26.3

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      |||.|.| .||+|..++..| ++|++|++++.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Di   30 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDI   30 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECS
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEEC
Confidence            5799997 799999999766 57999999988

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.56  E-value=0.032  Score=40.23  Aligned_cols=69  Identities=19%  Similarity=0.198  Sum_probs=47.8

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..|+++|.| -|.+|+.+++.|...|.+|+++.+ +|-..     +...   ..+.+.        ..++++++..|+||
T Consensus        22 aGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~-DPi~a-----lqA~---mdGf~v--------~~~~~a~~~aDi~v   83 (163)
T d1v8ba1          22 SGKIVVICG-YGDVGKGCASSMKGLGARVYITEI-DPICA-----IQAV---MEGFNV--------VTLDEIVDKGDFFI   83 (163)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECS-CHHHH-----HHHH---TTTCEE--------CCHHHHTTTCSEEE
T ss_pred             cCCEEEEec-ccccchhHHHHHHhCCCEEEEEec-Cchhh-----HHHH---hcCCcc--------CchhHccccCcEEE
Confidence            468899999 699999999999999999999988 54221     1111   123332        23456777778888


Q ss_pred             EccCCCC
Q 020334           84 HVAAPID   90 (327)
Q Consensus        84 h~a~~~~   90 (327)
                      -+-|..+
T Consensus        84 TaTGn~~   90 (163)
T d1v8ba1          84 TCTGNVD   90 (163)
T ss_dssp             ECCSSSS
T ss_pred             EcCCCCc
Confidence            7766443

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.53  E-value=0.02  Score=41.01  Aligned_cols=33  Identities=21%  Similarity=0.269  Sum_probs=28.6

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC--CCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH--GYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r   37 (327)
                      ||+|.|.|+||-||....+-+.+.  .++|.+++-
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa   35 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA   35 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            578999999999999999988876  478888766

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.34  E-value=0.11  Score=35.28  Aligned_cols=32  Identities=22%  Similarity=0.400  Sum_probs=28.4

Q ss_pred             CeEEEeCCc---chhHHHHHHHHHHCCCeEEEEEc
Q 020334            6 GKVCVTGGT---GFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         6 ~~ilVtGat---G~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      |+|.|.|+|   +-.|..+++.|.+.||+|+.+..
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP   36 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNP   36 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcc
Confidence            689999998   77999999999999999887743

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.31  E-value=0.37  Score=37.24  Aligned_cols=32  Identities=22%  Similarity=0.135  Sum_probs=27.4

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r   37 (327)
                      ..+|+|.|+ |.+|++++..|+..|. +++++|.
T Consensus        30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            468999995 8899999999999996 6777766

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.30  E-value=0.022  Score=40.73  Aligned_cols=33  Identities=27%  Similarity=0.273  Sum_probs=28.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC--CCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH--GYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r   37 (327)
                      +|+|.|.|+||-||....+-+.+.  .++|.++.-
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa   36 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTA   36 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEe
Confidence            689999999999999999999775  578888766

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.22  E-value=0.034  Score=43.07  Aligned_cols=33  Identities=33%  Similarity=0.392  Sum_probs=30.7

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      ..++|+|+|| |+.|...+.+|+++|++|+++.+
T Consensus        48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~   80 (233)
T d1djqa3          48 NKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDT   80 (233)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCceEEEEcc-cHHHHHHHHHHHHhccceeeEee
Confidence            4689999996 99999999999999999999988

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.21  E-value=0.037  Score=39.87  Aligned_cols=33  Identities=24%  Similarity=0.220  Sum_probs=27.8

Q ss_pred             CCeEEEe-CCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            5 KGKVCVT-GGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVt-GatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .++++|. .+.||+|..++..|++.|.+|+++.+
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~   72 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSG   72 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEec
Confidence            4556665 24599999999999999999999998

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.18  E-value=0.22  Score=36.26  Aligned_cols=78  Identities=14%  Similarity=0.201  Sum_probs=46.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCC-----------hhH
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLND-----------PES   71 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-----------~~~   71 (327)
                      |++||.|-| .|=||+.+++.|.+++ .+|.++.-..+..  ....+...     +...+..+-..           ...
T Consensus         1 M~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~--~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~   72 (172)
T d2czca2           1 MKVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDF--EAYRAKEL-----GIPVYAASEEFIPRFEKEGFEVAGT   72 (172)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSH--HHHHHHHT-----TCCEEESSGGGHHHHHHHTCCCSCB
T ss_pred             CcEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChH--HHHHhhhc-----CceeecccccceeeecccCccccch
Confidence            457999999 5999999999998764 6776665423322  11122111     12222222211           123


Q ss_pred             HHHHhcCCCEEEEccCCC
Q 020334           72 FDAAIAGCAGVIHVAAPI   89 (327)
Q Consensus        72 ~~~~~~~~d~vih~a~~~   89 (327)
                      +..++.++|+|+-|.|.+
T Consensus        73 ~~~~~~~vDvViEcTG~f   90 (172)
T d2czca2          73 LNDLLEKVDIIVDATPGG   90 (172)
T ss_dssp             HHHHHTTCSEEEECCSTT
T ss_pred             hhhhhccCCEEEECCCCC
Confidence            444556899999999864

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=94.15  E-value=0.045  Score=37.27  Aligned_cols=33  Identities=21%  Similarity=0.239  Sum_probs=28.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHH---CCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLD---HGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~---~g~~V~~~~r   37 (327)
                      .+++++|.|| |++|-.++..|.+   .|.+|+.+.|
T Consensus        17 ~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~   52 (117)
T d1feca2          17 APKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYR   52 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred             cCCeEEEECC-ChHHHHHHHHhHhhcccccccceecc
Confidence            4689999996 9999999987654   4889999998

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.10  E-value=0.024  Score=45.58  Aligned_cols=32  Identities=31%  Similarity=0.315  Sum_probs=29.9

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .|||+|+|| |.-|...+.+|++.|++|.++.+
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~   32 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEA   32 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeC
Confidence            478999996 99999999999999999999987

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.06  E-value=0.018  Score=46.14  Aligned_cols=33  Identities=27%  Similarity=0.195  Sum_probs=30.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      |+.+|+|.|| |..|..++..|.+.|++|.++.|
T Consensus         1 mk~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~   33 (292)
T d1k0ia1           1 MKTQVAIIGA-GPSGLLLGQLLHKAGIDNVILER   33 (292)
T ss_dssp             CBCSEEEECC-SHHHHHHHHHHHHHTCCEEEECS
T ss_pred             CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEeC
Confidence            3457999997 89999999999999999999998

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.04  E-value=0.043  Score=40.50  Aligned_cols=32  Identities=19%  Similarity=0.282  Sum_probs=26.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r   37 (327)
                      |-||.|-| .|-||+.++|.|.++ +.+|.++..
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd   33 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAK   33 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEC
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEEC
Confidence            45799999 699999999999987 468877765

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=93.96  E-value=0.03  Score=45.99  Aligned_cols=36  Identities=25%  Similarity=0.195  Sum_probs=30.8

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCC--CeEEEEEcC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHG--YFVTTTVRS   38 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~   38 (327)
                      |+. +|+|+|+|| |.-|...+..|+++|  ++|+++.|+
T Consensus         1 m~~-~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~   38 (335)
T d2gv8a1           1 LPT-IRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERR   38 (335)
T ss_dssp             CCS-CCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSS
T ss_pred             CCC-CCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECC
Confidence            553 678999996 999999999998875  699999994

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.84  E-value=0.045  Score=37.32  Aligned_cols=33  Identities=27%  Similarity=0.249  Sum_probs=27.3

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHH---CCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLD---HGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~---~g~~V~~~~r   37 (327)
                      .+++++|.|| |++|..++..|.+   +|.+|+++.|
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~   54 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYR   54 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEec
Confidence            4579999997 9999999976654   4668999988

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.82  E-value=0.024  Score=45.86  Aligned_cols=32  Identities=16%  Similarity=0.121  Sum_probs=29.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      |..|+|+|| |+-|..+++.|++.|++|.++.+
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk   32 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEK   32 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCCcEEEEEC
Confidence            457999996 99999999999999999999988

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.80  E-value=0.031  Score=41.00  Aligned_cols=32  Identities=28%  Similarity=0.108  Sum_probs=28.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC--eEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY--FVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r   37 (327)
                      .|||+|+|| |+.|..++..|.+.+.  +|+++.+
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~   35 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEP   35 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEEC
Confidence            689999996 9999999999998774  7888877

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=93.66  E-value=0.028  Score=44.96  Aligned_cols=31  Identities=26%  Similarity=0.252  Sum_probs=29.1

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      |+|+|+|| |.-|...+..|.++|++|+++.+
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~   31 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLES   31 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEec
Confidence            46999996 99999999999999999999988

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.57  E-value=0.019  Score=42.60  Aligned_cols=33  Identities=30%  Similarity=0.357  Sum_probs=27.1

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      |+.+|+|+|| |++|-.++..|.+.|.++.++.+
T Consensus         2 m~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           2 LKAPVVVLGA-GLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             CCSSEEEECC-SHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCCCEEEECc-cHHHHHHHHHHHhcCCceEEEEE
Confidence            5678999995 99999999999998877555444

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.51  E-value=0.036  Score=45.09  Aligned_cols=32  Identities=25%  Similarity=0.240  Sum_probs=30.0

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .++|+|+|| |..|...+..|+++|++|.++.+
T Consensus        30 pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~   61 (370)
T d2iida1          30 PKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEA   61 (370)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHHTCEEEEECS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeC
Confidence            578999996 99999999999999999999988

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.47  E-value=0.098  Score=44.35  Aligned_cols=79  Identities=16%  Similarity=0.090  Sum_probs=49.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchhhh--hhC-----------------CCCCCCCeEEEeC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDLSF--LTN-----------------LPGASERLQIFNA   64 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~--~~~-----------------~~~~~~~~~~~~~   64 (327)
                      ..||||.|+ |.+|+++++.|+..|. ++++++.+.-+ ...+..  +..                 .....-+++.+..
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve-~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~  114 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTID-VSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN  114 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCC-GGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECS
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcc-hhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeec
Confidence            357999997 7799999999999996 78888773221 111100  100                 0001134566666


Q ss_pred             CCCChhHHHHHhcCCCEEEEccC
Q 020334           65 DLNDPESFDAAIAGCAGVIHVAA   87 (327)
Q Consensus        65 D~~d~~~~~~~~~~~d~vih~a~   87 (327)
                      ++.+..  ..+++++|+||.+.-
T Consensus       115 ~i~~~~--~~~~~~~DlVi~~~D  135 (426)
T d1yovb1         115 KIQDFN--DTFYRQFHIIVCGLD  135 (426)
T ss_dssp             CGGGBC--HHHHTTCSEEEECCS
T ss_pred             cccchH--HHHHHhcchheeccC
Confidence            665533  357788999997753

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.20  E-value=0.043  Score=42.27  Aligned_cols=33  Identities=24%  Similarity=0.181  Sum_probs=29.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      ..++|+|-| .|-+|+++++.|.+.|.+|++.+.
T Consensus        38 ~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~   70 (230)
T d1leha1          38 EGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDV   70 (230)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecc
Confidence            468999999 599999999999999999998876

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.11  E-value=0.056  Score=39.78  Aligned_cols=32  Identities=19%  Similarity=0.301  Sum_probs=28.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      +++|+|.|| |++|..++..|.+.|.+|.++.+
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~   34 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLV   34 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEe
Confidence            578999996 99999999999999988776665

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.09  E-value=0.1  Score=41.68  Aligned_cols=26  Identities=27%  Similarity=0.245  Sum_probs=23.8

Q ss_pred             CcchhHHHHHHHHHHCCCeEEEEEcC
Q 020334           13 GTGFIGSWLIMRLLDHGYFVTTTVRS   38 (327)
Q Consensus        13 atG~iG~~l~~~L~~~g~~V~~~~r~   38 (327)
                      +||-.|.+++++|..+|++|+.+.+.
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecC
Confidence            47999999999999999999999873

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.79  E-value=0.054  Score=40.60  Aligned_cols=32  Identities=22%  Similarity=0.094  Sum_probs=27.5

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHC--CCeEEEEEcC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDH--GYFVTTTVRS   38 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~   38 (327)
                      |||+|+|| |++|..++..|.+.  +.+|+.+.|.
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~   34 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKG   34 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence            57999996 99999999999876  5678888883

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=92.71  E-value=0.054  Score=42.97  Aligned_cols=31  Identities=26%  Similarity=0.204  Sum_probs=28.5

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCCeEEEEEcCC
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSD   39 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (327)
                      |+|+|| |..|..++.+|+++|++|.++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            889996 9999999999999999999999843

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=92.70  E-value=0.045  Score=36.61  Aligned_cols=34  Identities=18%  Similarity=0.038  Sum_probs=28.5

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSD   39 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (327)
                      +|+|+|.|+ |.-|..++..|++..-+++...|+.
T Consensus        32 gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          32 GESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             TCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             CCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecC
Confidence            689999995 9999999999998877776666644

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.55  E-value=0.15  Score=38.37  Aligned_cols=77  Identities=14%  Similarity=0.133  Sum_probs=45.3

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCc-----chhhhhhCCCCCCCCeEEEe-CCCCChhHHHHHhc-C
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK-----KDLSFLTNLPGASERLQIFN-ADLNDPESFDAAIA-G   78 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~D~~d~~~~~~~~~-~   78 (327)
                      |||+|.|. +-.|..+++.|.+.|++|.++.-..+...     ..+..+...    .++.++. .++.+++.++.+-+ +
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~----~~i~~~~~~~~~~~~~~~~i~~~~   75 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAE----RGIPVYAPDNVNHPLWVERIAQLS   75 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHH----HTCCEECCSCCCSHHHHHHHHHTC
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHH----cCCcceecccccchhhhhhhhhhc
Confidence            56888875 56899999999999999876653122110     111111111    2455544 56666655444333 7


Q ss_pred             CCEEEEccC
Q 020334           79 CAGVIHVAA   87 (327)
Q Consensus        79 ~d~vih~a~   87 (327)
                      +|.++.+..
T Consensus        76 ~Dlii~~g~   84 (203)
T d2blna2          76 PDVIFSFYY   84 (203)
T ss_dssp             CSEEEEESC
T ss_pred             ccceeeeec
Confidence            898887664

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.21  E-value=0.084  Score=42.95  Aligned_cols=33  Identities=30%  Similarity=0.328  Sum_probs=29.9

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      ..+||+|+|| |.-|...+..|.+.|++|.++-+
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa   36 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEA   36 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeC
Confidence            3568999996 99999999999999999999877

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=92.03  E-value=0.065  Score=43.04  Aligned_cols=32  Identities=22%  Similarity=0.489  Sum_probs=28.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRS   38 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~   38 (327)
                      .+|+|+|| |.+|..++.+|+++|. +|.++.|+
T Consensus         2 ~dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           2 PRIVIIGA-GIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CCEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            36999996 9999999999999996 69999984

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.96  E-value=0.011  Score=45.88  Aligned_cols=26  Identities=27%  Similarity=0.277  Sum_probs=23.3

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeE
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFV   32 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V   32 (327)
                      |||+|+|| |.+|...+.+|+++|++|
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence            57999996 999999999999998754

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=91.94  E-value=0.23  Score=36.09  Aligned_cols=75  Identities=13%  Similarity=0.159  Sum_probs=44.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeC-CCCC-hhHHHHHh--cCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNA-DLND-PESFDAAI--AGC   79 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-D~~d-~~~~~~~~--~~~   79 (327)
                      ..+|+|+|+ |-+|...+..+...| .+|+++++ ++.+.+....+       .-.+.+.. +-.+ .+.+.+..  .++
T Consensus        29 g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~-~~~rl~~a~~~-------GAd~~in~~~~~~~~~~~~~~~~~~G~   99 (175)
T d1cdoa2          29 GSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDL-NPDKFEKAKVF-------GATDFVNPNDHSEPISQVLSKMTNGGV   99 (175)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS-CGGGHHHHHHT-------TCCEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred             CCEEEEEec-CCccchHHHHHHHHhhchheeecc-hHHHHHHHHHc-------CCcEEEcCCCcchhHHHHHHhhccCCc
Confidence            468999997 557777777777776 46888888 55444433332       11233321 1111 23333333  269


Q ss_pred             CEEEEccCC
Q 020334           80 AGVIHVAAP   88 (327)
Q Consensus        80 d~vih~a~~   88 (327)
                      |+|+.+.|.
T Consensus       100 d~vid~~G~  108 (175)
T d1cdoa2         100 DFSLECVGN  108 (175)
T ss_dssp             SEEEECSCC
T ss_pred             ceeeeecCC
Confidence            999999984

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.87  E-value=0.51  Score=36.15  Aligned_cols=34  Identities=24%  Similarity=0.353  Sum_probs=28.5

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHH-CCCeEEEEEc
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLD-HGYFVTTTVR   37 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r   37 (327)
                      ...++|+|-| .|-+|+++++.|.+ .|..|++++-
T Consensus        29 l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          29 PKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             TTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence            3467899998 69999999999975 5999988764

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.86  E-value=0.074  Score=40.97  Aligned_cols=30  Identities=30%  Similarity=0.183  Sum_probs=27.9

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCCeEEEEEcC
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRS   38 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (327)
                      |+|+| +|.-|...+..|+++|++|.++.++
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~   37 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQ   37 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCC
Confidence            79999 5999999999999999999999983

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=91.68  E-value=0.54  Score=34.07  Aligned_cols=32  Identities=16%  Similarity=0.241  Sum_probs=26.1

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCC-CeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHG-YFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r   37 (327)
                      |++|.|-| .|-||+.+.|.|.+++ .+|.++.-
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd   33 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSK   33 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEec
Confidence            57899998 6999999999998775 56666655

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.50  E-value=0.11  Score=36.44  Aligned_cols=32  Identities=31%  Similarity=0.388  Sum_probs=27.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHH----CCCeEEEEEc
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLD----HGYFVTTTVR   37 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~----~g~~V~~~~r   37 (327)
                      .++++|.|| ||+|..++..|..    .|.+|+.+.+
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~   72 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFP   72 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecc
Confidence            468999996 9999999998863    4899999888

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=91.49  E-value=0.09  Score=40.94  Aligned_cols=31  Identities=26%  Similarity=0.264  Sum_probs=28.2

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVR   37 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r   37 (327)
                      ++|+|+|| |.-|...+..|.++|+ +|+++.+
T Consensus         1 P~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~   32 (347)
T d1b5qa1           1 PRVIVVGA-GMSGISAAKRLSEAGITDLLILEA   32 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHHTTCCCEEEECS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCCCcEEEEEC
Confidence            46999996 9999999999999996 7999988

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.46  E-value=0.13  Score=40.32  Aligned_cols=32  Identities=25%  Similarity=0.218  Sum_probs=28.8

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRS   38 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~   38 (327)
                      .+|+|+|| |..|..++..|.+.|. .|.++.|+
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~   34 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESS   34 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            57999996 9999999999999995 89899883

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.16  E-value=0.088  Score=38.01  Aligned_cols=29  Identities=34%  Similarity=0.332  Sum_probs=25.7

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      ||+|+|| |++|..++..|. ++.+|+++.|
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~   30 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDK   30 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEec
Confidence            7999996 999999999996 4789999987

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.08  E-value=0.33  Score=37.79  Aligned_cols=34  Identities=18%  Similarity=0.075  Sum_probs=29.8

Q ss_pred             CCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            3 EQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      ...++++|-| .|-+|+++++.|.+.|.+|+++.-
T Consensus        34 l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          34 LVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             STTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            3468999999 699999999999999999988754

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.49  E-value=0.076  Score=39.09  Aligned_cols=37  Identities=14%  Similarity=0.195  Sum_probs=30.2

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHK   43 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   43 (327)
                      .+++|+|+|+ |..+++++..|.+.| +|+++.| +.++.
T Consensus        17 ~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR-~~~ka   53 (177)
T d1nvta1          17 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANR-TVEKA   53 (177)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECS-SHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccc-ceeeehh-hhhHH
Confidence            4689999996 889999999998776 8999999 54443

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.16  E-value=0.41  Score=35.81  Aligned_cols=31  Identities=23%  Similarity=0.268  Sum_probs=26.6

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      |||++.| ++..|..+.+.|.++|++|.++.-
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t   31 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFT   31 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEc
Confidence            5799998 578899999999999999987654

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=90.05  E-value=0.37  Score=35.33  Aligned_cols=77  Identities=19%  Similarity=0.149  Sum_probs=44.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCC-----------CCCCeEEEeCCCCChhHHH
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPG-----------ASERLQIFNADLNDPESFD   73 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~D~~d~~~~~   73 (327)
                      +.+||..|+.-  |. .+..|+++|++|++++. ++......+...+...           .....+++.+|..+.....
T Consensus        21 ~~rvLd~GCG~--G~-~a~~la~~G~~V~gvD~-S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~   96 (201)
T d1pjza_          21 GARVLVPLCGK--SQ-DMSWLSGQGYHVVGAEL-SEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD   96 (201)
T ss_dssp             TCEEEETTTCC--SH-HHHHHHHHCCEEEEEEE-CHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred             CCEEEEecCcC--CH-HHHHHHHcCCceEeecc-cHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccccc
Confidence            57899999632  33 55577888999999999 4322222222111100           0235678888887754322


Q ss_pred             HHhcCCCEEEEccC
Q 020334           74 AAIAGCAGVIHVAA   87 (327)
Q Consensus        74 ~~~~~~d~vih~a~   87 (327)
                        ....|.|+-...
T Consensus        97 --~~~~D~i~~~~~  108 (201)
T d1pjza_          97 --IGHCAAFYDRAA  108 (201)
T ss_dssp             --HHSEEEEEEESC
T ss_pred             --ccceeEEEEEee
Confidence              224577765444

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.79  E-value=0.3  Score=42.47  Aligned_cols=110  Identities=13%  Similarity=0.129  Sum_probs=62.7

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCC-eEEEEEcCCCCCcchh--------------------hhhhCCCCCCCCeEEEe
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGY-FVTTTVRSDPEHKKDL--------------------SFLTNLPGASERLQIFN   63 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~   63 (327)
                      ..+|+|.|+ |.+|+.+++.|+..|. ++++++.+ .-....+                    ..+..+ +..-+++.+.
T Consensus        25 ~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d-~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~l-Np~v~i~~~~  101 (529)
T d1yova1          25 SAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN-QVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQEL-NSDVSGSFVE  101 (529)
T ss_dssp             HCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS-BCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTT-CTTSBCCEES
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC-cCChhhcCchhcCChhhCCCHHHHHHHHHHHHh-CCCCcEEEEc
Confidence            468999996 7799999999999985 67777652 2111111                    111111 0011233444


Q ss_pred             CCCCChh-HHHHHhcCCCEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhcCCccEEEEeccceeeee
Q 020334           64 ADLNDPE-SFDAAIAGCAGVIHVAAPIDIDGKETEEVMTQRAVNGTIGILKSCLKSGTVKRFVYTSSGSTVYF  135 (327)
Q Consensus        64 ~D~~d~~-~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v~~~  135 (327)
                      .+..+.. ...+.+.++|+||.+...                ......+-+.|++.+  ..+|+.+|.+.||.
T Consensus       102 ~~~~~~~~~~~~~~~~~dvVv~~~~~----------------~~~~~~l~~~c~~~~--ip~i~~~~~G~~G~  156 (529)
T d1yova1         102 ESPENLLDNDPSFFCRFTVVVATQLP----------------ESTSLRLADVLWNSQ--IPLLICRTYGLVGY  156 (529)
T ss_dssp             SCHHHHHHSCGGGGGGCSEEEEESCC----------------HHHHHHHHHHHHHHT--CCEEEEEEETTEEE
T ss_pred             CCchhhhhhHHHHhcCCCEEEECCCC----------------HHHHHHHHHHHHHcC--CCEEEEeccCCEEE
Confidence            3332210 011345678999976431                112345677888777  46888888777763

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.11  E-value=0.86  Score=34.92  Aligned_cols=33  Identities=18%  Similarity=0.296  Sum_probs=27.6

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEc
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVR   37 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r   37 (327)
                      ..++|+|-|. |-+|+++++.|.+. |..|+++.-
T Consensus        31 ~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          31 KGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence            4688999995 99999999999864 888887754

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.79  E-value=0.22  Score=40.37  Aligned_cols=29  Identities=34%  Similarity=0.363  Sum_probs=27.5

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      |+|+|| |.-|...+.+|+++|++|+++.+
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~   30 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEA   30 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEES
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEec
Confidence            789995 99999999999999999999988

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=88.74  E-value=1.1  Score=36.06  Aligned_cols=79  Identities=13%  Similarity=-0.017  Sum_probs=47.1

Q ss_pred             CCeEE-EeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhH-HHHHhcCCCEE
Q 020334            5 KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPES-FDAAIAGCAGV   82 (327)
Q Consensus         5 ~~~il-VtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~~~d~v   82 (327)
                      +++|| +.-++|..+.+++    ..+.+|++++. ++......+......+ ..+++++.+|..+... +...-..+|.|
T Consensus       146 g~rVLDl~~gtG~~s~~~a----~g~~~V~~vD~-s~~al~~a~~n~~~ng-l~~~~~i~~d~~~~~~~~~~~~~~fD~V  219 (318)
T d1wxxa2         146 GERALDVFSYAGGFALHLA----LGFREVVAVDS-SAEALRRAEENARLNG-LGNVRVLEANAFDLLRRLEKEGERFDLV  219 (318)
T ss_dssp             EEEEEEETCTTTHHHHHHH----HHEEEEEEEES-CHHHHHHHHHHHHHTT-CTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred             CCeeeccCCCCcHHHHHHH----hcCCcEEeecc-hHHHHHHHHHHHHHcC-CCCcceeeccHHHHhhhhHhhhcCCCEE
Confidence            46788 6667787766544    34678999999 5433333322211111 2478999999876422 22222468999


Q ss_pred             EEccCCC
Q 020334           83 IHVAAPI   89 (327)
Q Consensus        83 ih~a~~~   89 (327)
                      |......
T Consensus       220 i~DpP~~  226 (318)
T d1wxxa2         220 VLDPPAF  226 (318)
T ss_dssp             EECCCCS
T ss_pred             EEcCCcc
Confidence            9776443

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=88.71  E-value=0.23  Score=39.81  Aligned_cols=30  Identities=33%  Similarity=0.494  Sum_probs=28.4

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      .|+|+|| |+.|..++.+|.+.|.+|.++.+
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek   38 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIET   38 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEc
Confidence            6999996 99999999999999999999988

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.07  E-value=0.34  Score=34.44  Aligned_cols=33  Identities=27%  Similarity=0.189  Sum_probs=28.3

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCe-EEEEEcC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYF-VTTTVRS   38 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~   38 (327)
                      .++|+|+|| |..|...+..+.+.|.+ |+.+.|+
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeC
Confidence            578999996 99999999999999865 7777773

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=87.89  E-value=0.16  Score=36.08  Aligned_cols=37  Identities=19%  Similarity=0.246  Sum_probs=23.1

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchh
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDL   46 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~   46 (327)
                      |-++| +|.+|+++++.|.+.++.+.+.+| ++++...+
T Consensus         2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R-~~~~~~~l   38 (153)
T d2i76a2           2 LNFVG-TGTLTRFFLECLKDRYEIGYILSR-SIDRARNL   38 (153)
T ss_dssp             CEEES-CCHHHHHHHHTTC----CCCEECS-SHHHHHHH
T ss_pred             EEEEe-CcHHHHHHHHHHHhCCCEEEEEeC-Chhhhcch
Confidence            34667 699999999988665444467788 55444433

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=87.85  E-value=0.82  Score=34.12  Aligned_cols=78  Identities=17%  Similarity=0.167  Sum_probs=45.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcch--------hhhhhCCCCCCCCeEEEeCCCCChhHHHHHh
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKD--------LSFLTNLPGASERLQIFNADLNDPESFDAAI   76 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~   76 (327)
                      +|||++.| ++..+..+.+.|.+.|++|.++.-..+.....        ......    ..++.....+..+.+.+.+.+
T Consensus         3 ~mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~   77 (206)
T d1fmta2           3 SLRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAE----EKGLPVFQPVSLRPQENQQLV   77 (206)
T ss_dssp             CCEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHH----HTTCCEECCSCSCSHHHHHHH
T ss_pred             CcEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhh----ccCccccccccccchhhHHHH
Confidence            57899998 57889999999999999987665422211111        001111    124555555554545555555


Q ss_pred             c--CCCEEEEccC
Q 020334           77 A--GCAGVIHVAA   87 (327)
Q Consensus        77 ~--~~d~vih~a~   87 (327)
                      +  ++|+++-+..
T Consensus        78 ~~~~~d~~v~~~~   90 (206)
T d1fmta2          78 AELQADVMVVVAY   90 (206)
T ss_dssp             HHTTCSEEEEESC
T ss_pred             hhhcceEEEeecc
Confidence            4  6787775554

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=86.87  E-value=0.37  Score=36.98  Aligned_cols=32  Identities=25%  Similarity=0.215  Sum_probs=29.1

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRS   38 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (327)
                      --|+|+|| |..|...+..|+++|++|.++.+.
T Consensus         3 yDViIIGa-G~aGl~aA~~la~~G~~V~liEk~   34 (251)
T d2i0za1           3 YDVIVIGG-GPSGLMAAIGAAEEGANVLLLDKG   34 (251)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            45899996 999999999999999999999983

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=86.69  E-value=0.99  Score=32.76  Aligned_cols=37  Identities=16%  Similarity=0.236  Sum_probs=24.3

Q ss_pred             CCeEEEeCCcchhHHH-HHHHHHHCC--CeEEEEEcCCCCC
Q 020334            5 KGKVCVTGGTGFIGSW-LIMRLLDHG--YFVTTTVRSDPEH   42 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~-l~~~L~~~g--~~V~~~~r~~~~~   42 (327)
                      +.||.|+| +|.+|+. .+..+.+.+  .+|.++.-.++..
T Consensus         3 kirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~   42 (181)
T d1zh8a1           3 KIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSH   42 (181)
T ss_dssp             CEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHH
T ss_pred             CcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhh
Confidence            45899999 5999986 466776543  4777654424433

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.65  E-value=0.31  Score=37.00  Aligned_cols=31  Identities=29%  Similarity=0.487  Sum_probs=27.7

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHC--CCeEEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDH--GYFVTTTVR   37 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r   37 (327)
                      +||+|+|| |.-|...+++|.+.  |++|+++.+
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~   34 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEK   34 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeC
Confidence            58999995 99999999999765  789999988

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=86.55  E-value=0.68  Score=33.06  Aligned_cols=67  Identities=18%  Similarity=0.177  Sum_probs=39.3

Q ss_pred             CCeEEEeCCcchhHHH-HHHHHHHC-CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEE
Q 020334            5 KGKVCVTGGTGFIGSW-LIMRLLDH-GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGV   82 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~-l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   82 (327)
                      +++|.|+| +|.+|.. .+..|... +.+++++.-.++.....+..-.       ++     +..+  .+..+++++|+|
T Consensus         1 Kiri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~-------~~-----~~~~--~~~~l~~~~D~V   65 (164)
T d1tlta1           1 KLRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW-------RI-----PYAD--SLSSLAASCDAV   65 (164)
T ss_dssp             CEEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHH-------TC-----CBCS--SHHHHHTTCSEE
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcc-------cc-----cccc--cchhhhhhcccc
Confidence            36899999 5999975 56666554 6787776543554443332211       11     1222  244456789998


Q ss_pred             EEcc
Q 020334           83 IHVA   86 (327)
Q Consensus        83 ih~a   86 (327)
                      +-+.
T Consensus        66 ~I~t   69 (164)
T d1tlta1          66 FVHS   69 (164)
T ss_dssp             EECS
T ss_pred             cccc
Confidence            7554

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.38  E-value=0.071  Score=38.66  Aligned_cols=76  Identities=22%  Similarity=0.201  Sum_probs=41.3

Q ss_pred             CeEEEeCCcchhHHHHHHH-HHHC-----CCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCC
Q 020334            6 GKVCVTGGTGFIGSWLIMR-LLDH-----GYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGC   79 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~-L~~~-----g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~   79 (327)
                      |||.|+|| |-+|..++-. |+..     ..++..++. ++++......+.+... .........  ++   ..+.++++
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Di-d~~k~~~~~d~~~~~~-~~~~~~~~t--~~---~~~~l~~a   72 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDI-DEEKQKIVVDFVKRLV-KDRFKVLIS--DT---FEGAVVDA   72 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECS-CHHHHHHHHHHHHHHH-TTSSEEEEC--SS---HHHHHTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEec-CcHHHHHHHHHHHhhh-ccCceEEEe--cC---cccccCCC
Confidence            57999998 5566665533 3321     358999988 5444332222211000 012222221  12   34567899


Q ss_pred             CEEEEccCCC
Q 020334           80 AGVIHVAAPI   89 (327)
Q Consensus        80 d~vih~a~~~   89 (327)
                      |+||..|+..
T Consensus        73 DvVVita~~~   82 (162)
T d1up7a1          73 KYVIFQFRPG   82 (162)
T ss_dssp             SEEEECCCTT
T ss_pred             CEEEEecccC
Confidence            9999999853

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=86.34  E-value=0.21  Score=37.13  Aligned_cols=78  Identities=14%  Similarity=0.155  Sum_probs=51.3

Q ss_pred             CeEE-EeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhh-hhCCCCCCCCeEEEeCCCCChhHHHHHh--cCCCE
Q 020334            6 GKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSF-LTNLPGASERLQIFNADLNDPESFDAAI--AGCAG   81 (327)
Q Consensus         6 ~~il-VtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~   81 (327)
                      ..++ +|-|+|....++.+.+ . +.+|+++++ ++........ +...   ..++.++.++..+...+..-+  .++|.
T Consensus        25 ~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~-d~~~l~~a~~~l~~~---~~r~~~~~~~f~~~~~~~~~~~~~~vdg   98 (192)
T d1m6ya2          25 KIILDCTVGEGGHSRAILEHC-P-GCRIIGIDV-DSEVLRIAEEKLKEF---SDRVSLFKVSYREADFLLKTLGIEKVDG   98 (192)
T ss_dssp             CEEEETTCTTSHHHHHHHHHC-T-TCEEEEEES-CHHHHHHHHHHTGGG---TTTEEEEECCGGGHHHHHHHTTCSCEEE
T ss_pred             CEEEEecCCCcHHHHHHHhcC-C-CCeEEEeec-hHHHHHHHHHhhccc---cccccchhHHHhhHHHHHHHcCCCCcce
Confidence            4455 6777888888888776 3 468999999 5433322222 2221   257999999998876664443  47899


Q ss_pred             EEEccCCC
Q 020334           82 VIHVAAPI   89 (327)
Q Consensus        82 vih~a~~~   89 (327)
                      |+.-.|..
T Consensus        99 Il~DlGvS  106 (192)
T d1m6ya2          99 ILMDLGVS  106 (192)
T ss_dssp             EEEECSCC
T ss_pred             eeeccchh
Confidence            88777753

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.33  E-value=0.16  Score=37.62  Aligned_cols=36  Identities=11%  Similarity=0.129  Sum_probs=31.3

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      |....++|+|+|| |..|...+..|++.|.+|.++.+
T Consensus         1 m~~~~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~   36 (192)
T d1vdca1           1 LETHNTRLCIVGS-GPAAHTAAIYAARAELKPLLFEG   36 (192)
T ss_dssp             CEEEEEEEEEECC-SHHHHHHHHHHHHTTCCCEEECC
T ss_pred             CCcccceEEEECC-CHHHHHHHHHHHHcCCcEEEEEe
Confidence            4444678999996 99999999999999999998876

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=86.30  E-value=0.26  Score=38.19  Aligned_cols=32  Identities=22%  Similarity=0.237  Sum_probs=29.2

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRS   38 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (327)
                      ..|+|+|| |-.|...+.+|+++|.+|.++.+.
T Consensus         5 ~DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~   36 (253)
T d2gqfa1           5 SENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNG   36 (253)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CcEEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            45999996 999999999999999999999983

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=86.23  E-value=0.37  Score=38.89  Aligned_cols=32  Identities=25%  Similarity=0.380  Sum_probs=23.1

Q ss_pred             CeEEEeC-Cc-chh--HHHHHHHHHHCCCeEEEEEc
Q 020334            6 GKVCVTG-GT-GFI--GSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         6 ~~ilVtG-at-G~i--G~~l~~~L~~~g~~V~~~~r   37 (327)
                      |||+|++ || |.+  ..+|+++|.++||+|..++.
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~   36 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGT   36 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEe
Confidence            5788766 44 333  33588899999999988775

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=86.18  E-value=0.47  Score=33.84  Aligned_cols=34  Identities=35%  Similarity=0.370  Sum_probs=23.6

Q ss_pred             CCCCCCeEEEeCCcchhHHHH-HHHHHHC-CCeEEEEE
Q 020334            1 MEEQKGKVCVTGGTGFIGSWL-IMRLLDH-GYFVTTTV   36 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l-~~~L~~~-g~~V~~~~   36 (327)
                      |+. +.||.|+| +|.+|+.+ .+.|.+. ..++.++.
T Consensus         1 M~k-kirvaIIG-aG~ig~~~~~~~l~~~~~~el~ava   36 (157)
T d1nvmb1           1 MNQ-KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMV   36 (157)
T ss_dssp             CCS-CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEE
T ss_pred             CCC-CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEE
Confidence            663 46899999 89999865 4555444 45777764

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=85.98  E-value=0.37  Score=39.53  Aligned_cols=30  Identities=23%  Similarity=0.233  Sum_probs=27.8

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCCeEEEEEcC
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGYFVTTTVRS   38 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (327)
                      |+|+| +|+-|..++..|++.|++|.++-+.
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence            78889 5999999999999999999999983

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.50  E-value=1  Score=33.51  Aligned_cols=83  Identities=14%  Similarity=0.121  Sum_probs=50.0

Q ss_pred             CeEEEeCCcchhHHHHH-HHH---HHC-----CCeEEEEEcCCCCCcchhhhhhCCCCC-----------CCCeEEEeCC
Q 020334            6 GKVCVTGGTGFIGSWLI-MRL---LDH-----GYFVTTTVRSDPEHKKDLSFLTNLPGA-----------SERLQIFNAD   65 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~-~~L---~~~-----g~~V~~~~r~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~D   65 (327)
                      -.++|.||||-+..--+ -.|   ...     +..|+++.|+.-+.......+......           ..++.++.+|
T Consensus        21 ~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~~d  100 (203)
T d1qkia1          21 HIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQ  100 (203)
T ss_dssp             EEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCBCC
T ss_pred             cEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccccCc
Confidence            35889999999886422 222   222     467999999543322221111111000           2568999999


Q ss_pred             CCChhHHHHHhc---------CCCEEEEccCC
Q 020334           66 LNDPESFDAAIA---------GCAGVIHVAAP   88 (327)
Q Consensus        66 ~~d~~~~~~~~~---------~~d~vih~a~~   88 (327)
                      +.|++++.++-+         ....|+.+|-+
T Consensus       101 ~~~~~~~~~L~~~l~~~~~~~~~~rifYLAvp  132 (203)
T d1qkia1         101 YDDAASYQRLNSHMNALHLGSQANRLFYLALP  132 (203)
T ss_dssp             TTCHHHHHHHHHHHHHTTTTTTSEEEEEECSC
T ss_pred             CCChhhHHHHHHHHHHHhcCCCcceEEEEecC
Confidence            999988766422         23578888864

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=84.48  E-value=1.6  Score=30.91  Aligned_cols=30  Identities=20%  Similarity=0.181  Sum_probs=26.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCCCeEE
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHGYFVT   33 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~   33 (327)
                      .+++|.|++.+|..|.-++..+.+.|-++-
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~   31 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLA   31 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEEC
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccC
Confidence            367899999999999999999999997763

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=83.93  E-value=0.67  Score=35.25  Aligned_cols=78  Identities=13%  Similarity=0.057  Sum_probs=53.1

Q ss_pred             CCeEE-EeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            5 KGKVC-VTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         5 ~~~il-VtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      +.+|| +-=|+|..-++|++..-.. -.|++++. ++.....+.....   ..+++..+.+|..+++.+......+|+|+
T Consensus        74 G~~VLDlGaGsG~~t~~la~~VG~~-G~V~aVD~-s~~~l~~a~~~a~---~~~~~~~i~~d~~~~~~~~~~~~~vD~i~  148 (227)
T d1g8aa_          74 GKSVLYLGIASGTTASHVSDIVGWE-GKIFGIEF-SPRVLRELVPIVE---ERRNIVPILGDATKPEEYRALVPKVDVIF  148 (227)
T ss_dssp             TCEEEEETTTSTTHHHHHHHHHCTT-SEEEEEES-CHHHHHHHHHHHS---SCTTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred             CCEEEEeccCCCHHHHHHHHHhCCC-CEEEEEeC-cHHHHHHHHHHHH---hcCCceEEEEECCCcccccccccceEEEE
Confidence            56888 4446888888888866444 48999999 5433333322222   23578899999999887766666788888


Q ss_pred             EccC
Q 020334           84 HVAA   87 (327)
Q Consensus        84 h~a~   87 (327)
                      +...
T Consensus       149 ~d~~  152 (227)
T d1g8aa_         149 EDVA  152 (227)
T ss_dssp             ECCC
T ss_pred             EEcc
Confidence            7543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=83.83  E-value=0.73  Score=37.17  Aligned_cols=80  Identities=14%  Similarity=0.044  Sum_probs=45.2

Q ss_pred             CCeEE-EeCCcchhHHHHHHHHHHCC-CeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhH-HHHHhcCCCE
Q 020334            5 KGKVC-VTGGTGFIGSWLIMRLLDHG-YFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPES-FDAAIAGCAG   81 (327)
Q Consensus         5 ~~~il-VtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~~~d~   81 (327)
                      +++|| +..++|..+.+++    ..| .+|++++. ++........-....+...+++++.+|..+... +...-..+|.
T Consensus       146 g~~VLDl~~g~G~~si~~a----~~ga~~V~~vD~-s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~fD~  220 (324)
T d2as0a2         146 GDRVLDVFTYTGGFAIHAA----IAGADEVIGIDK-SPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDI  220 (324)
T ss_dssp             TCEEEETTCTTTHHHHHHH----HTTCSEEEEEES-CHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred             CCeeecccCcccchhhhhh----hcCCcEEEeecC-CHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCCCc
Confidence            56788 5555677666544    345 47999999 544333332222221223578899999865321 1111236899


Q ss_pred             EEEccCCC
Q 020334           82 VIHVAAPI   89 (327)
Q Consensus        82 vih~a~~~   89 (327)
                      ||...-..
T Consensus       221 Vi~DpP~~  228 (324)
T d2as0a2         221 VVLDPPAF  228 (324)
T ss_dssp             EEECCCCS
T ss_pred             hhcCCccc
Confidence            99766433

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=83.59  E-value=0.49  Score=38.26  Aligned_cols=30  Identities=20%  Similarity=0.131  Sum_probs=26.9

Q ss_pred             EEEeCCcchhHHHHHHHHH-----HCCCeEEEEEcC
Q 020334            8 VCVTGGTGFIGSWLIMRLL-----DHGYFVTTTVRS   38 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~   38 (327)
                      |+|+|| |..|..++..|+     +.|++|+++.|+
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~   44 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKR   44 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCC
Confidence            899996 999999999997     469999999984

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=82.96  E-value=0.91  Score=28.77  Aligned_cols=31  Identities=19%  Similarity=0.128  Sum_probs=26.2

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      |||||+| +|.=-.+++..|.+...+|+++--
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pG   31 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPG   31 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecC
Confidence            6899999 588888999999998889887743

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.94  E-value=0.96  Score=34.24  Aligned_cols=82  Identities=13%  Similarity=0.066  Sum_probs=47.8

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhC----------C------CCCCCCeEEEeCCCCC
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTN----------L------PGASERLQIFNADLND   68 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----------~------~~~~~~~~~~~~D~~d   68 (327)
                      +.+||..|+ |- | ..+..|+++|++|++++. ++...........          .      .....+++++.+|+.+
T Consensus        46 ~~rvLd~GC-G~-G-~~a~~LA~~G~~V~gvD~-S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          46 GLRVFFPLC-GK-A-VEMKWFADRGHSVVGVEI-SELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             SCEEEETTC-TT-C-THHHHHHHTTCEEEEECS-CHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCEEEEeCC-CC-c-HHHHHHHhCCCcEEEEeC-CHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            568999996 33 4 457778889999999988 4322111111000          0      0012478889999865


Q ss_pred             hhHHHHHhcCCCEEEEccCCCCCC
Q 020334           69 PESFDAAIAGCAGVIHVAAPIDID   92 (327)
Q Consensus        69 ~~~~~~~~~~~d~vih~a~~~~~~   92 (327)
                      ....  .....|+|+-.+......
T Consensus       122 l~~~--~~~~fd~i~~~~~l~~~~  143 (229)
T d2bzga1         122 LPRT--NIGKFDMIWDRGALVAIN  143 (229)
T ss_dssp             GGGS--CCCCEEEEEESSSTTTSC
T ss_pred             cccc--ccCceeEEEEEEEEEecc
Confidence            4321  112468888777655543

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=82.93  E-value=0.63  Score=34.79  Aligned_cols=29  Identities=24%  Similarity=0.067  Sum_probs=27.3

Q ss_pred             EEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            8 VCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      ++|+|| |+.|...+..+++.|.+|.++.+
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~   33 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEA   33 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEES
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEec
Confidence            789996 99999999999999999999987

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.79  E-value=0.54  Score=37.35  Aligned_cols=31  Identities=26%  Similarity=0.224  Sum_probs=28.3

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEcC
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVRS   38 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (327)
                      -|+|+|| |..|...+.+|+++|.+|+++.+.
T Consensus        18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            3899995 999999999999999999999883

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.65  E-value=0.67  Score=33.82  Aligned_cols=35  Identities=11%  Similarity=0.001  Sum_probs=26.2

Q ss_pred             CeEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcCCCC
Q 020334            6 GKVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRSDPE   41 (327)
Q Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~   41 (327)
                      .||.|+| +|.+|+..++.|... +.+|.++.-.+++
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~   37 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLE   37 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHH
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCcc
Confidence            5799999 589999999999775 6788766432433

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=82.28  E-value=0.56  Score=35.02  Aligned_cols=31  Identities=23%  Similarity=0.219  Sum_probs=24.9

Q ss_pred             CeEEEeCCcchhHH-----HHHHHHHHCCCeEEEEE
Q 020334            6 GKVCVTGGTGFIGS-----WLIMRLLDHGYFVTTTV   36 (327)
Q Consensus         6 ~~ilVtGatG~iG~-----~l~~~L~~~g~~V~~~~   36 (327)
                      |+++|||-...+|+     +|++.|+++|++|..++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            78999995436765     67888899999998875

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=82.08  E-value=0.88  Score=35.70  Aligned_cols=80  Identities=13%  Similarity=0.105  Sum_probs=46.4

Q ss_pred             CCeEEEeCC-cchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            5 KGKVCVTGG-TGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      ..+||=+|+ +|.+...|++..   |.+|++++. ++.............+...+++++.+|..+... .  -..+|+|+
T Consensus        68 ~~~vLDiGcG~G~~~~~la~~~---~~~v~gvD~-s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~-~--~~sfD~V~  140 (282)
T d2o57a1          68 QAKGLDLGAGYGGAARFLVRKF---GVSIDCLNI-APVQNKRNEEYNNQAGLADNITVKYGSFLEIPC-E--DNSYDFIW  140 (282)
T ss_dssp             TCEEEEETCTTSHHHHHHHHHH---CCEEEEEES-CHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS-C--TTCEEEEE
T ss_pred             CCEEEEeCCCCcHHHhhhhccC---CcEEEEEec-cchhhhhhhcccccccccccccccccccccccc-c--ccccchhh
Confidence            468996665 665555554432   789999998 443322222221111223589999999977431 1  12579988


Q ss_pred             EccCCCCC
Q 020334           84 HVAAPIDI   91 (327)
Q Consensus        84 h~a~~~~~   91 (327)
                      -..+..+.
T Consensus       141 ~~~~l~h~  148 (282)
T d2o57a1         141 SQDAFLHS  148 (282)
T ss_dssp             EESCGGGC
T ss_pred             ccchhhhc
Confidence            66654443

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=81.87  E-value=0.64  Score=32.93  Aligned_cols=29  Identities=24%  Similarity=0.127  Sum_probs=25.0

Q ss_pred             eEEEeCCcchhHHHHHHHHHHCCCeEEEEEc
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (327)
                      ||-++| .|.+|.++++.|++.|+.+ +..|
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~   30 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNR   30 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECS
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeC
Confidence            688999 5999999999999998866 4666

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.69  E-value=0.61  Score=38.58  Aligned_cols=31  Identities=23%  Similarity=0.251  Sum_probs=28.0

Q ss_pred             eEEEeCCcchhHHHHHHHHHH------CCCeEEEEEcC
Q 020334            7 KVCVTGGTGFIGSWLIMRLLD------HGYFVTTTVRS   38 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~------~g~~V~~~~r~   38 (327)
                      -|+|+|| |--|+..+..|++      +|.+|.++.|.
T Consensus        34 DViIVGg-GPAGlsaA~~LA~l~~~~~~Gl~VlllEK~   70 (380)
T d2gmha1          34 DVVIVGA-GPAGLSAATRLKQLAAQHEKDLRVCLVEKA   70 (380)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECSS
T ss_pred             CEEEECC-CHHHHHHHHHHHhhhhhhcCCCEEEEEcCC
Confidence            4899997 9999999999987      79999999994

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=81.28  E-value=0.84  Score=35.67  Aligned_cols=31  Identities=23%  Similarity=0.222  Sum_probs=28.0

Q ss_pred             eEEEeCCcchhHHHHHHHHHHC-CCeEEEEEcC
Q 020334            7 KVCVTGGTGFIGSWLIMRLLDH-GYFVTTTVRS   38 (327)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~   38 (327)
                      -|+|+|| |.-|...+.+|+++ |++|.++.++
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~   66 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQS   66 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESS
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCCeEEEEecC
Confidence            4899997 99999999999875 9999999983

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=81.13  E-value=3.2  Score=30.30  Aligned_cols=25  Identities=32%  Similarity=0.437  Sum_probs=21.4

Q ss_pred             CCCeEEEeCCcchhHHHHHHHHHHCC
Q 020334            4 QKGKVCVTGGTGFIGSWLIMRLLDHG   29 (327)
Q Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g   29 (327)
                      |++||.|=| -|=||+.+.|++.+++
T Consensus         1 M~ikigING-FGRIGR~vlR~~~~~~   25 (190)
T d1k3ta1           1 MPIKVGING-FGRIGRMVFQALCEDG   25 (190)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHHHTT
T ss_pred             CCeEEEEEC-CChHHHHHHHHHHHcC
Confidence            457899999 6999999999998764

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=81.05  E-value=0.65  Score=38.63  Aligned_cols=32  Identities=22%  Similarity=0.059  Sum_probs=24.2

Q ss_pred             CeEEEeCC------cchhH---HHHHHHHHHCCCeEEEEEc
Q 020334            6 GKVCVTGG------TGFIG---SWLIMRLLDHGYFVTTTVR   37 (327)
Q Consensus         6 ~~ilVtGa------tG~iG---~~l~~~L~~~g~~V~~~~r   37 (327)
                      ||||+++.      +|.+|   .+|+++|++.||+|++++.
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            56887554      35554   6779999999999998874

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=80.53  E-value=4.7  Score=29.47  Aligned_cols=41  Identities=22%  Similarity=0.297  Sum_probs=24.8

Q ss_pred             CCCCCCeEEEeCCcchhHHHHHH-HH---HHC-----CCeEEEEEcCCCC
Q 020334            1 MEEQKGKVCVTGGTGFIGSWLIM-RL---LDH-----GYFVTTTVRSDPE   41 (327)
Q Consensus         1 m~~~~~~ilVtGatG~iG~~l~~-~L---~~~-----g~~V~~~~r~~~~   41 (327)
                      |+.....++|.||||-+.+--+- .|   ...     +..|+++.|+...
T Consensus         1 ~~e~~t~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~   50 (195)
T d1h9aa1           1 VSEIKTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALN   50 (195)
T ss_dssp             CCCCCEEEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCC
T ss_pred             CCCCceEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCc
Confidence            45433344578999998864322 22   222     4679999995443

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=80.05  E-value=0.53  Score=33.46  Aligned_cols=27  Identities=33%  Similarity=0.257  Sum_probs=24.2

Q ss_pred             CCeEEEeCCcchhHHHHHHHHHHCCCeE
Q 020334            5 KGKVCVTGGTGFIGSWLIMRLLDHGYFV   32 (327)
Q Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V   32 (327)
                      .++|+|+|| |++|..+++.+.+.|.++
T Consensus        29 gkrVvVIGg-G~~g~d~a~~~~r~G~~~   55 (162)
T d1ps9a2          29 GNKVAIIGC-GGIGFDTAMYLSQPGEST   55 (162)
T ss_dssp             CSEEEEECC-HHHHHHHHHHHTCCSSCG
T ss_pred             CCceEEEcC-chhHHHHHHHHHHcCCcc
Confidence            689999996 999999999999998654

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=80.05  E-value=0.63  Score=34.92  Aligned_cols=76  Identities=14%  Similarity=0.127  Sum_probs=50.2

Q ss_pred             CCeEEEeC-CcchhHHHHHHHHHHCCCeEEEEEcCCCCCcchhhhhhCCCCCCCCeEEEeCCCCChhHHHHHhcCCCEEE
Q 020334            5 KGKVCVTG-GTGFIGSWLIMRLLDHGYFVTTTVRSDPEHKKDLSFLTNLPGASERLQIFNADLNDPESFDAAIAGCAGVI   83 (327)
Q Consensus         5 ~~~ilVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   83 (327)
                      +.+||=.| |+|..-+++++.. ..| +|++++. ++.....+......   .+++.++.+|..++......+..+|+|+
T Consensus        57 g~~VLDlGcG~G~~~~~la~~v-~~g-~V~gvDi-s~~~i~~a~~~a~~---~~ni~~i~~d~~~~~~~~~~~~~vd~v~  130 (209)
T d1nt2a_          57 DERVLYLGAASGTTVSHLADIV-DEG-IIYAVEY-SAKPFEKLLELVRE---RNNIIPLLFDASKPWKYSGIVEKVDLIY  130 (209)
T ss_dssp             SCEEEEETCTTSHHHHHHHHHT-TTS-EEEEECC-CHHHHHHHHHHHHH---CSSEEEECSCTTCGGGTTTTCCCEEEEE
T ss_pred             CCEEEEeCCcCCHHHHHHHHhc-cCC-eEEEEeC-CHHHHHHHHHHhhc---cCCceEEEeeccCccccccccceEEEEE
Confidence            46888666 4676667776654 445 8999998 44333322222111   2589999999999887666666778887


Q ss_pred             Ecc
Q 020334           84 HVA   86 (327)
Q Consensus        84 h~a   86 (327)
                      |..
T Consensus       131 ~~~  133 (209)
T d1nt2a_         131 QDI  133 (209)
T ss_dssp             ECC
T ss_pred             ecc
Confidence            754