Citrus Sinensis ID: 020347

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------
Protein Sequence
MASLSPQTLLSISKPNKPNSKQLPSHACLLSKLSQNPNFSRNKQRKLNSWVVNSVVNEELDVLPVQSQDLTDMQEGVVVGREEDGELASQVSQVSGFSDGTLSFDGFSSASADERRGNEEMERLIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHNWTAYEEALKTNPVLAKMVISGVVYSLGDWIAQELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARIAEAPAEVKPCLPDISPPEE
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccHHHccccccccccccHHHHcccccEEEEcccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccHHcccHHHHHHHHHHHHHHHHHHHHccEEEEEEEEEEcccccccHHHHHHHHcccHHHHHHHHHHHHccEEEEEEEHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccEEEccccEEEEEEccccccEEEEccHHHHHHHHHHHccccccccHHcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccHccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccEEEEEcccccccccEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHEEEcccccccccHHHHHHHccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccEEccHHHEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
maslspqtllsiskpnkpnskqlpshacllsklsqnpnfsrnkqrklNSWVVNSVVNeeldvlpvqsqdltdmqegvvvgreedgelasqvsqvsgfsdgtlsfdgfssasaderrgNEEMERLIDRTINATIVLAVGTFAITKLLTIdqdywhgwTIFEIVryaplhnwTAYEEALKTNPVLAKMVISGVVYSLGdwiaqelfpfqdwwvvpakvafDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATfwpmltagwklwpfahlVTYGLVPVEQRLLWVDCVELIWVTILSTysnekseariaeapaevkpclpdisppee
Flexible Loop (DISEMBL)
maslspqtllsiskpnkpnsKQLPSHACLLSKLSQnpnfsrnkqrklNSWVVNSVVNEELDvlpvqsqdltdMQEGVVVGREEDGELASQVSQVSGFSDGTLSFDGfssasaderrgNEEMERLIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHNWTAYEEALKTNPVLAKMVISGVVYSLGDWIAQELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILStysnekseariaeapaevkpclpdisppee
Low Complexity Region (SEG)
MASLSPQTLLSISKPNKPNSKQLPSHACLLSKLSQNPNFSRNKQRKLnswvvnsvvnEELDVLPVQSQDLTDMQegvvvgreedgeLASQVSQVSGFSDGTLSFDGFSSASADERRGNEEMERLIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHNWTAYEEALKTNPVLAKMVISGVVYSLGDWIAQELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARIAEAPAEVKPCLPDISPPEE
Disordered region (IsUnstruct)
**********************************************LNSWVVNSVVNEELDVLPV**********************************************************LIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHNWTAYEEALKTNPVLAKMVISGVVYSLGDWIAQELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTY****************************
Disordered Region (DISOPRED)
************************************************SWVVNSVVNEELDVL************************************************************LIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHNWTAYEEALKTNPVLAKMVISGVVYSLGDWIAQELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILS******************************
Disordered Region (DISEMBL)
MASLSPQTLLSISKPNKPNSKQLPSHACLLSKLSQNPNFSRNKQRKLNSWVVNSVVNEELDVLPVQSQDLTDMQEGVVVGREEDGELASQVSQVSGFSDGTLSFDGFSSASADERRGNEEMERLIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHNWTAYEEALKTNPVLAKMVISGVVYSLGDWIAQELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARIAEAPAEVKPCLPDISPPEE
Disordered Region (DISPRO)
*********************************************KLNSWVVNSVVNEELDVLPVQSQDL***QEGVVVGRE****LASQVSQVSGFS********************EEMERLIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHNWTAYEEALKTNPVLAKMVISGVVYSLGDWIAQELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSN**************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASLSPQTLLSISKPNKPNSKQLPSHACLLSKLSQNPNFSRNKQRKLNSWVVNSVVNEELDVLPVQSQDLTDMQEGVVVGREEDGELASQVSQVSGFSDGTLSFDGFSSASADERRGNEEMERLIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHNWTAYEEALKTNPVLAKMVISGVVYSLGDWIAQELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARIAEAPAEVKPCLPDISPPEE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	327	2.2.26 [Sep-21-2011]
Q6CAW5	202	Protein SYM1 OS=Yarrowia	yes	no	0.287	0.465	0.393	1e-11
Q6CIY7	195	Protein SYM1 OS=Kluyverom	yes	no	0.388	0.651	0.245	3e-08
Q754F0	182	Protein SYM1 OS=Ashbya go	yes	no	0.406	0.730	0.267	6e-08
Q06563	197	Protein SYM1 OS=Saccharom	yes	no	0.397	0.659	0.244	3e-07
Q2KIY1	196	Peroxisomal membrane prot	yes	no	0.406	0.678	0.210	1e-06
Q4WDZ0	196	Protein sym1 OS=Neosartor	no	no	0.278	0.464	0.319	2e-06
Q4P9K6	199	Protein SYM1 OS=Ustilago	N/A	no	0.314	0.517	0.309	2e-06
Q6FXJ3	210	Protein SYM1 OS=Candida g	yes	no	0.397	0.619	0.235	2e-06
Q54GD8	184	PXMP2/4 family protein 3	yes	no	0.284	0.505	0.336	2e-06
Q7SCY7	172	Protein sym-1 OS=Neurospo	N/A	no	0.373	0.709	0.246	4e-06

>sp|Q6CAW5|SYM1_YARLI Protein SYM1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SYM1 PE=3 SV=1

 Score = 71.2 bits (173), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 53/94 (56%)

Query: 212 VPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTAGWKLWPFAHLV 271
           V AKVA DQ  +A +    Y+ V+GLL  +SP +I+  LK  +W  L  GW +WP   L 
Sbjct: 73  VIAKVAIDQAVFAPSSIGYYFSVMGLLEGKSPDTIWQSLKNQYWDTLKCGWMIWPAFQLF 132

Query: 272 TYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSE 305
            +G+VP   R+L  +C  L+W T L+  +  K E
Sbjct: 133 NFGIVPPNFRVLASNCCGLVWNTFLAYQNANKME 166

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.
Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

>sp|Q6CIY7|SYM1_KLULA Protein SYM1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SYM1 PE=3 SV=1

 Score = 59.3 bits (142), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 68/171 (39%), Gaps = 44/171 (25%)

Query: 169 NWTAYEEALKTNPVLAKMVISGVVYSLGDWIAQELFP----------------------- 205
           NW  Y  ++K +P L   +++G ++ +GD IAQ  FP                       
Sbjct: 6   NW--YTASVKRSPRLTNGIMTGSLFGIGDVIAQVGFPEKKGQKYDLARTVRAVVYGSLIF 63

Query: 206 -------------------FQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSI 246
                               + W    A+V  DQ  +A     +YY V+ +L  +S    
Sbjct: 64  SIIGDSWYKFLNQKVIVKPGKHWTNTAARVGCDQLLFAPVGIPMYYGVMSILEGKSLVDA 123

Query: 247 FSELKATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILS 297
             +++  +WP L   W +WP   L+ + LVPV  RL  V+ + + W   LS
Sbjct: 124 KKKIEDNWWPTLVTNWYVWPAFQLINFSLVPVHHRLFSVNIISIFWNAFLS 174

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

>sp|Q754F0|SYM1_ASHGO Protein SYM1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SYM1 PE=3 SV=1

 Score = 58.5 bits (140), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 43/176 (24%)

Query: 173 YEEALKTNPVLAKMVISGVVYSLGDWIAQELFP---------------------FQ---- 207
           Y+ +L+++P     + +G ++ LGD +AQ  FP                     F     
Sbjct: 8   YKASLQSHPKRTNALTTGFLFGLGDIVAQTQFPEPGASYDPMRTLRPFLYGAVLFSLVGD 67

Query: 208 -----------------DWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSEL 250
                             W  V A+VA DQ  +A     +YY  + L+   S   +   L
Sbjct: 68  KWYRFLSTVRLGRLPQAHWANVLARVACDQLIFAPIGVPLYYTAMALMEGGSLEDVRIRL 127

Query: 251 KATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEA 306
              +W  L A W +WP   L  + LVPV+ RLL V+ + + W T LS YSN  + +
Sbjct: 128 SEKWWSTLLANWIVWPAFQLCNFSLVPVQHRLLTVNVLSIFWNTYLS-YSNSTASS 182

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

>sp|Q06563|SYM1_YEAST Protein SYM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SYM1 PE=1 SV=1

 Score = 56.2 bits (134), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 68/176 (38%), Gaps = 46/176 (26%)

Query: 173 YEEALKTNPVLAKMVISGVVYSLGDWIAQELFPFQD------------------------ 208
           YE +LK  P     +++G ++ +GD  AQ LFP                           
Sbjct: 7   YEASLKRRPKTTNAIMTGALFGIGDVSAQLLFPTSKVNKGYDYKRTARAVIYGSLIFSFI 66

Query: 209 ---------------------WWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIF 247
                                W  +  +VA DQ A+A      Y+  + ++   S     
Sbjct: 67  GDKWYKILNNKIYMRNRPQYHWSNMVLRVAVDQLAFAPLGLPFYFTCMSIMEGRSFDVAK 126

Query: 248 SELKATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEK 303
            ++K  +WP L   W +WP    + + +VP++ RLL V+ V + W T LS Y N K
Sbjct: 127 LKIKEQWWPTLLTNWAVWPLFQAINFSVVPLQHRLLAVNVVAIFWNTYLS-YKNSK 181

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability. Required for ethanol metabolism and tolerance during heat shock.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q2KIY1|PXMP2_BOVIN Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3

 Score = 54.3 bits (129), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/176 (21%), Positives = 75/176 (42%), Gaps = 43/176 (24%)

Query: 166 PLHNWTAYEEALKTNPVLAKMVISGVVYSLGDWIAQEL---------------------- 203
           P    + Y   L+  PVL K   SG++ +LG+++AQ +                      
Sbjct: 18  PRRALSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGPLRYA 77

Query: 204 --------------FPFQDWWV---VP----AKVAFDQTAWAAAWNSIYYMVLGLLRLES 242
                         +   + W+   VP     ++  D+  +A A+ S++++V+  L  + 
Sbjct: 78  IYGFFFTGPLGHFFYLLMERWIPSEVPLAGIKRLLLDRLLFAPAFLSLFFLVMNFLEGQD 137

Query: 243 PFSIFSELKATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILST 298
             +  +++K+ FWP L   W++W     +    +PV+ R+L+ + V L W   L++
Sbjct: 138 TAAFAAKMKSGFWPALRMNWRVWTPVQFININYIPVQFRVLFANLVALFWYAYLAS 193

Seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the peroxisomal membrane.

Bos taurus (taxid: 9913)

>sp|Q4WDZ0|SYM1_ASPFU Protein sym1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=sym1 PE=3 SV=1

 Score = 53.9 bits (128), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 3/94 (3%)

Query: 212 VPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTAGWKLWPFAHLV 271
           V  +VA DQ  +A     ++   + +L   S   +  +L+ ++WP L A W +WPF  LV
Sbjct: 100 VVGRVAADQLLFAPTMIGVFLSSMSVLEGGS---LSEKLERSYWPALKANWTVWPFLQLV 156

Query: 272 TYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSE 305
            + LVP++ R+L V+ + + W   LS  +N  S+
Sbjct: 157 NFALVPLQFRVLTVNVLNIGWNCFLSLSNNVGSQ 190

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

>sp|Q4P9K6|SYM1_USTMA Protein SYM1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SYM1 PE=3 SV=1

 Score = 53.5 bits (127), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 7/110 (6%)

Query: 212 VPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTAGWKLWPFAHLV 271
           +  KVA DQ   + A+ ++++    ++   SP    +++   +WP L   W LW     +
Sbjct: 84  IATKVALDQAIASPAFVALFFGATTIMEGGSPDQAKNKIIHNWWPTLKTAWGLWIPVQTL 143

Query: 272 TYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARIAEAPAEVKPCLPD 321
              LVP  QRLL+V+ V + W T LS  S   S+         VKP L D
Sbjct: 144 NMALVPPSQRLLFVNVVSIFWNTFLSIKSAAASD-------HAVKPNLND 186

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Ustilago maydis (strain 521 / FGSC 9021) (taxid: 237631)

>sp|Q6FXJ3|SYM1_CANGA Protein SYM1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SYM1 PE=3 SV=1

 Score = 53.5 bits (127), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 67/187 (35%), Gaps = 57/187 (30%)

Query: 173 YEEALKTNPVLAKMVISGVVYSLGDWIAQELFP--------------------------- 205
           YE  LK  P L   +++G ++ +GD  AQ LFP                           
Sbjct: 8   YEHQLKVRPKLTNSIMTGALFGIGDVSAQLLFPSGPDTLPPSAQTNDVKRGKYDIPRTVR 67

Query: 206 ------------FQDWWVVPAKVAF-----------------DQTAWAAAWNSIYYMVLG 236
                          W+    KV F                 DQ  +A      Y+  + 
Sbjct: 68  AVVYGSMIFSFIGDRWYRFLTKVKFSNKPAKHWSNMVLRVCVDQLGFAPLGLPFYFGCMS 127

Query: 237 LLRLESPFSIFSELKATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTIL 296
           LL      +   ++K  +W  L   W +WP   +V + LVP++ RLL  + V + W T L
Sbjct: 128 LLEGHGLGAAREKIKLQWWDTLKTNWCVWPLFQMVNFSLVPLQHRLLAANVVAIFWNTFL 187

Query: 297 STYSNEK 303
           S Y+N +
Sbjct: 188 S-YTNSQ 193

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

>sp|Q54GD8|PX24C_DICDI PXMP2/4 family protein 3 OS=Dictyostelium discoideum GN=DDB_G0290223 PE=3 SV=1

 Score = 53.1 bits (126), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 206 FQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTAGWKLW 265
           +Q W     K+  DQ  +A   N  +Y VL +L    P SI  +L    +P L A WK+W
Sbjct: 90  YQSW----GKLIVDQLVFAPFINIAFYSVLAILD-GKPKSILFKLYFDLFPTLKASWKVW 144

Query: 266 PFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEK 303
           P A L+ +  VP   R+L+ + V   W   LS  + +K
Sbjct: 145 PLAQLINFRFVPSHLRVLFGNLVGFCWGIYLSILATKK 182

Dictyostelium discoideum (taxid: 44689)

>sp|Q7SCY7|SYM1_NEUCR Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=sym-1 PE=3 SV=2

 Score = 52.8 bits (125), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 44/166 (26%)

Query: 173 YEEALKTNPVLAKMVISGVVYSLGDWIAQEL----------------------------- 203
           Y+  L   P+L + V + +++ +GD  AQ+L                             
Sbjct: 5   YKAQLAARPLLTQAVTTSILFGVGDVAAQQLVDRRGLSNHDLTRTGRMVLYGGAVFGPAA 64

Query: 204 ---FPF-QDWWVVP--------AKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELK 251
              F F Q   VVP        A+VA DQ  +A  +  I+   LG + +     +  +L+
Sbjct: 65  TTWFRFLQKRVVVPGSTNKTILARVAADQGLFAPTFIGIF---LGSMAVLEGTDVKEKLQ 121

Query: 252 ATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILS 297
             +W  L+  W +WPF  +V + +VP++ R+L+V+ + + W   LS
Sbjct: 122 KNYWEALSTNWMVWPFVQMVNFKVVPLDHRVLFVNVISIGWNCYLS 167

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
118488904	369	unknown [Populus trichocarpa x Populus d	0.944	0.837	0.637	1e-117
30695366	366	Peroxisomal membrane 22 kDa (Mpv17/PMP22	0.899	0.803	0.585	1e-108
225461355	371	PREDICTED: uncharacterized protein LOC10	0.966	0.851	0.598	1e-107
449463132	376	PREDICTED: uncharacterized protein LOC10	0.929	0.808	0.588	1e-106
356549763	376	PREDICTED: uncharacterized protein LOC10	0.975	0.848	0.579	1e-106
297847674	360	hypothetical protein ARALYDRAFT_474411 [	0.871	0.791	0.592	1e-105
356542260	375	PREDICTED: uncharacterized protein LOC10	0.972	0.848	0.571	1e-104
302143057	262	unnamed protein product [Vitis vinifera]	0.678	0.847	0.662	1e-92
224117242	240	predicted protein [Populus trichocarpa]	0.596	0.812	0.738	2e-92
224128402	238	predicted protein [Populus trichocarpa]	0.596	0.819	0.725	3e-91

>gi|118488904|gb|ABK96261.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 229/359 (63%), Positives = 257/359 (71%), Gaps = 50/359 (13%)

Query: 1   MASLSPQTLLSISKPNKPNSKQLPSHACLLSKLSQNPNFSRNKQRKLNSWVVNSVVNEEL 60
           + ++SP  LLS+SK  K  SK L +   L  KL ++  F RNKQ    SW +NSVV EEL
Sbjct: 4   LHAISPHGLLSLSKTKKTISKSLQNPQFLSPKLPKSQTFCRNKQ----SWHLNSVVQEEL 59

Query: 61  DVLPVQSQDLTDMQEGVV-VGREEDG-ELASQVSQVSGFSDGTLSFDGFSSASADERRG- 117
           DV+PVQS D  D QEG++ +  E +G ELA+QVS   G SDG  SF+GFSSAS+    G 
Sbjct: 60  DVIPVQSGDSVDQQEGMLAIPVEREGTELAAQVSGFGG-SDGQFSFEGFSSASSSGIDGE 118

Query: 118 ----NEEMERLIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHNWTAY 173
                 E ERLIDRTINA IVL  GT+AITKLLTID +YWHGWT+FEI+RYAP HNW+AY
Sbjct: 119 SIDRQSESERLIDRTINAMIVLGAGTYAITKLLTIDHNYWHGWTLFEILRYAPQHNWSAY 178

Query: 174 EEALKTNPVLAKMVISGVVYSLGDWIAQ-------------------------------- 201
           EEALKTNPVLAKM+ISG+VYSLGDWIAQ                                
Sbjct: 179 EEALKTNPVLAKMMISGIVYSLGDWIAQCYEGKPLFEYDRTRMFRSGLVGFTLHGSLSHY 238

Query: 202 ------ELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFW 255
                 ELFPFQDWWVVPAKVAFDQT WAAAWNSIY+  LG LRLESP SIFSEL ATFW
Sbjct: 239 YYQFCEELFPFQDWWVVPAKVAFDQTLWAAAWNSIYFTALGFLRLESPASIFSELTATFW 298

Query: 256 PMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARIAEAPAE 314
           PMLTAGWKLWPFAHL+TYG++PVEQRLLWVDCVELIWVTILSTYSNEKSEARI+EA  E
Sbjct: 299 PMLTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARISEAAVE 357

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30695366|ref|NP_564615.3| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana] gi|12324641|gb|AAG52277.1|AC019018_14 unknown protein; 54928-56750 [Arabidopsis thaliana] gi|14326545|gb|AAK60317.1|AF385726_1 At1g52870/F14G24_14 [Arabidopsis thaliana] gi|25090145|gb|AAN72239.1| At1g52870/F14G24_14 [Arabidopsis thaliana] gi|332194741|gb|AEE32862.1| Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana]

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/362 (58%), Positives = 248/362 (68%), Gaps = 68/362 (18%)

Query: 3   SLSPQTLLSISKPN-KPNSKQLPSHACLLSKLSQNPNFSRNKQRKLNSWVVNSVVNEELD 61
           S+SP++ L +SKP+ KP+  Q+                 RNKQR     V  +++ +E+D
Sbjct: 9   SISPRSFLPLSKPSLKPHRSQI---------------LLRNKQRNC---VSCALIRDEID 50

Query: 62  VLPVQSQDLTDMQEGVVVGREEDGELASQVSQVSGFS----DGTLSFDGFSSASA----- 112
           ++PVQS+D TD +EG VV    +  +    S V GFS    +G LS +GF S+S+     
Sbjct: 51  LIPVQSRDRTDHEEGSVVVMSTETAVDGNESVVVGFSAATSEGQLSLEGFPSSSSSGADL 110

Query: 113 --DERRGNEEMERLIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHNW 170
             ++RR NEEME++IDRTINATIVLA G++AITKLLTID DYWHGWT+FEI+RYAP HNW
Sbjct: 111 GDEKRRENEEMEKMIDRTINATIVLAAGSYAITKLLTIDHDYWHGWTLFEILRYAPQHNW 170

Query: 171 TAYEEALKTNPVLAKMVISGVVYSLGDWIAQ----------------------------- 201
            AYEEALK NPVLAKMVISGVVYS+GDWIAQ                             
Sbjct: 171 IAYEEALKQNPVLAKMVISGVVYSVGDWIAQCYEGKPLFEIDRARTLRSGLVGFTLHGSL 230

Query: 202 ---------ELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKA 252
                    ELFPFQDWWVVP KVAFDQT W+A WNSIY+ VLG LR ESP SIF ELKA
Sbjct: 231 SHFYYQFCEELFPFQDWWVVPVKVAFDQTVWSAIWNSIYFTVLGFLRFESPISIFKELKA 290

Query: 253 TFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARIAEAP 312
           TF PMLTAGWKLWPFAHL+TYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARI+E+ 
Sbjct: 291 TFLPMLTAGWKLWPFAHLITYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARISESV 350

Query: 313 AE 314
            E
Sbjct: 351 IE 352

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461355|ref|XP_002284644.1| PREDICTED: uncharacterized protein LOC100253839 [Vitis vinifera]

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 222/371 (59%), Positives = 253/371 (68%), Gaps = 55/371 (14%)

Query: 7   QTLLSISKP-NKPNSKQLPSHACLLSKLSQNPNFSRNKQRKLNSWVVNSVVNEELDVLPV 65
           Q  L I+KP  +P SK  P+   L   L Q         RK   WVV   V EELDV+PV
Sbjct: 6   QRFLPITKPFTEPKSKPRPT-IFLPKGLPQTSGIFSGTNRK--RWVV--AVAEELDVIPV 60

Query: 66  QSQDLTDMQEGVV--VGREEDGELASQVSQVSG---FS-DGTLSFDGFSSASAD----ER 115
           QS D TD Q+GV+  +  EE+GEL +QV   SG   FS +G   F GFSS+S+     E 
Sbjct: 61  QSSDSTDQQDGVLARIEVEEEGELVNQVGGFSGEGRFSFEGAGEFQGFSSSSSSSTSSEG 120

Query: 116 RGN-EEMERLIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHNWTAYE 174
           +G  E++ERLIDR+INATIVLA G+FA+TKLLTID DYWHGWTIFEI+RYAP HNW+AYE
Sbjct: 121 QGEAEDVERLIDRSINATIVLAAGSFAVTKLLTIDADYWHGWTIFEILRYAPQHNWSAYE 180

Query: 175 EALKTNPVLAKMVISGVVYSLGDWIAQ--------------------------------- 201
           EALKTNPV AKMVISGVVYSLGDWIAQ                                 
Sbjct: 181 EALKTNPVFAKMVISGVVYSLGDWIAQCYEGKPLFEFDRARMLRSGLVGFTLHGSLSHYY 240

Query: 202 -----ELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWP 256
                 LFPFQDWWVVPAKVAFDQT WAA WNSIYY V+G LR +SP ++F EL+ATFWP
Sbjct: 241 YQFCEALFPFQDWWVVPAKVAFDQTLWAAVWNSIYYTVVGFLRFDSPANVFGELRATFWP 300

Query: 257 MLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARIAEAPAEVK 316
           MLTAGWKLWPFAHL+TYG++PVEQRLLWVDCVELIWVTILSTYSNEKSEAR++EA AE  
Sbjct: 301 MLTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARVSEASAEAA 360

Query: 317 PCLPDISPPEE 327
              P    PE+
Sbjct: 361 SNSPPTGSPEK 371

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463132|ref|XP_004149288.1| PREDICTED: uncharacterized protein LOC101205134 [Cucumis sativus] gi|449528619|ref|XP_004171301.1| PREDICTED: uncharacterized protein LOC101228605 [Cucumis sativus]

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 213/362 (58%), Positives = 244/362 (67%), Gaps = 58/362 (16%)

Query: 6   PQTLLSISKPNKPNSKQLPS-----HACLLSKLSQNPNFSRNKQRKLNSWVVNSVVNEEL 60
           P T  S +   +  +   P      HA  L + S      RN     ++W +NS V EE 
Sbjct: 9   PHTFTSFTTAKRAPAPSPPRAFINFHAPKLPERSIFSTIGRN-----SNWALNSAV-EEF 62

Query: 61  DVLPVQSQDLTDMQEGVVVGR-EEDGELASQVSQVSGFSD----GTLSFDGFSS-ASADE 114
           DV+PVQS D TD QEGV +GR E DG      + V GF +    G     GFSS AS  +
Sbjct: 63  DVIPVQSSDFTDQQEGVALGRAERDGAEGEMGTAVGGFGELSLGGAGEIQGFSSSASVAD 122

Query: 115 RRGNE--EMER-LIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHNWT 171
             G E  EMER +IDR INATIVLA G++A+TKLLTIDQDYWHGWT++EI+RYAP HNW+
Sbjct: 123 GGGTETGEMERVMIDRIINATIVLAAGSYALTKLLTIDQDYWHGWTLYEILRYAPQHNWS 182

Query: 172 AYEEALKTNPVLAKMVISGVVYSLGDWIAQ------------------------------ 201
           AYEEALKT+PVLAKMVISGVVYSLGDWIAQ                              
Sbjct: 183 AYEEALKTHPVLAKMVISGVVYSLGDWIAQCFEGKPLFEFDRTRMFRSGLVGFSLHGSLS 242

Query: 202 --------ELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKAT 253
                    LFPFQDWWVVPAKVAFDQTAW+A WNSIY++VLG LRLESP SIF+ELKAT
Sbjct: 243 HYYYHFCEGLFPFQDWWVVPAKVAFDQTAWSAVWNSIYFVVLGFLRLESPVSIFNELKAT 302

Query: 254 FWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARIAEAPA 313
           FWPMLTAGWKLWPFAHL+TYG++PVEQRLLWVDCVELIWVTILSTYSNEKSEARI+E   
Sbjct: 303 FWPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARISEVAT 362

Query: 314 EV 315
           ++
Sbjct: 363 DL 364

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549763|ref|XP_003543260.1| PREDICTED: uncharacterized protein LOC100786706 [Glycine max]

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 219/378 (57%), Positives = 267/378 (70%), Gaps = 59/378 (15%)

Query: 2   ASLSPQTLL-SISKPNKP--NSKQLPSHACLLSKLSQNPNFSRNKQRKLNSWVVNSVVNE 58
           ++++P+T L SI KP  P   +K + S A    +LS N   S NK+    +  VNS  +E
Sbjct: 6   STVAPRTFLPSIPKPRAPLHAAKSVASAARNFPRLSHNLILSGNKR----AVAVNSA-SE 60

Query: 59  ELDVLPVQSQDLTDMQEGVVVGREE----DGELASQVSQVSGFSDGTLSFDGFSSASADE 114
           E DV+ VQS+D+TD QEGVVV R E    DGELA+QVS+  G ++G LS +GFSS+S+  
Sbjct: 61  EFDVISVQSEDITDQQEGVVVSRVEMEGGDGELATQVSRF-GANEGLLSLEGFSSSSSPS 119

Query: 115 RRGNE-----EMERLIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHN 169
                     +ME+LIDRTINATIVLA GTFA+TKLLTID DYWHGWT++EI+RYAP HN
Sbjct: 120 SSSLIGSESVDMEKLIDRTINATIVLAAGTFAVTKLLTIDSDYWHGWTLYEILRYAPQHN 179

Query: 170 WTAYEEALKTNPVLAKMVISGVVYSLGDWIAQ---------------------------- 201
           W+AYEEALKTNPVLAKM+ISG+VYSLGDWIAQ                            
Sbjct: 180 WSAYEEALKTNPVLAKMMISGIVYSLGDWIAQCVEGKPLFEFDRARMFRSGLVGFTLHGS 239

Query: 202 ----------ELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELK 251
                     ELFP+++WWVVPAKVAFDQTAW+A WNSIYY V+ LLRL+ P SI +ELK
Sbjct: 240 LSHFYYQFCEELFPYKEWWVVPAKVAFDQTAWSALWNSIYYTVVALLRLDPPMSILNELK 299

Query: 252 ATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARIAEA 311
           ATF+PMLTAGWKLWPFAHL+TYG++PVEQRLLWVD +ELIWVTILST+SNEKSEAR +++
Sbjct: 300 ATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDTIELIWVTILSTFSNEKSEARNSQS 359

Query: 312 --PAEVKPCLPDISPPEE 327
             P+EVK     + PPEE
Sbjct: 360 MVPSEVKSTT-YVHPPEE 376

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297847674|ref|XP_002891718.1| hypothetical protein ARALYDRAFT_474411 [Arabidopsis lyrata subsp. lyrata] gi|297337560|gb|EFH67977.1| hypothetical protein ARALYDRAFT_474411 [Arabidopsis lyrata subsp. lyrata]

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/353 (59%), Positives = 239/353 (67%), Gaps = 68/353 (19%)

Query: 3   SLSPQTLLSISKPN-KPNSKQLPSHACLLSKLSQNPNFSRNKQRKLNSWVVNSVVNEELD 61
           S+SP++ L +SKP+ KP+  Q+               F RNKQR        +++ +E+D
Sbjct: 9   SISPRSFLPLSKPSLKPHRSQI---------------FLRNKQRTC------ALIRDEID 47

Query: 62  VLPVQSQDLTDMQEGVVVGREEDGELASQVSQVSGFS----DGTLSFDGFSSASAD---E 114
           V+PVQS+D TD +EG VV    + E     S V GFS    +G LS +GF S+  D   E
Sbjct: 48  VIPVQSRDRTDHEEGSVVVMSTETERDVNESVVVGFSAATSEGQLSLEGFPSSGGDLGDE 107

Query: 115 RRG-NEEMERLIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHNWTAY 173
           +RG NEE E++IDRTINATIVLA G++AITKLLTID DYWH WT+ EI+RYAP HNW AY
Sbjct: 108 KRGENEEREKMIDRTINATIVLAAGSYAITKLLTIDHDYWHVWTLLEILRYAPQHNWIAY 167

Query: 174 EEALKTNPVLAKMVISGVVYSLGDWIAQ-------------------------------- 201
           EEALK NPVLAKMVISGVVYS+GDWIAQ                                
Sbjct: 168 EEALKQNPVLAKMVISGVVYSVGDWIAQCYEGKPLFEIDRARTLRSGLVGFTLHGSLSHF 227

Query: 202 ------ELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFW 255
                 ELFPFQDWWVVP KV FDQT W+A WNSIY+ VLG LR ESP SIF ELKATF 
Sbjct: 228 YYQFCEELFPFQDWWVVPVKVVFDQTVWSAIWNSIYFTVLGFLRFESPLSIFKELKATFL 287

Query: 256 PMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARI 308
           PMLTAGWKLWPFAHL+TYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARI
Sbjct: 288 PMLTAGWKLWPFAHLITYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARI 340

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542260|ref|XP_003539587.1| PREDICTED: uncharacterized protein LOC100805057 [Glycine max]

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 216/378 (57%), Positives = 263/378 (69%), Gaps = 60/378 (15%)

Query: 2   ASLSPQTLL-SISKPNKP--NSKQLPSHACLLSKLSQNPNFSRNKQRKLNSWVVNSVVNE 58
           ++++P+T L SI KP  P   +K +   A    +LS+N   S NK+      V  +   E
Sbjct: 6   STVAPRTFLPSIPKPRAPLHAAKFVAGGAHNFRRLSRNLILSGNKRA-----VAANSAAE 60

Query: 59  ELDVLPVQSQDLTDMQEGVVVGREE----DGELASQVSQVSGFSDGTLSFDGFSSASADE 114
           E DV+ VQS D+TD QEGVVV R E    D ELA+QVS   G ++G LS +GFSS+S+  
Sbjct: 61  EFDVISVQSDDITDQQEGVVVSRVEMEGGDCELATQVSGF-GANEGLLSLEGFSSSSSSS 119

Query: 115 RR--GNE---EMERLIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHN 169
               GNE   +ME+LIDRTINATIVLA GTFA+TKLLTID DYWHGWT++EI+RYAP HN
Sbjct: 120 SSLVGNESEEDMEKLIDRTINATIVLAAGTFAVTKLLTIDSDYWHGWTLYEILRYAPQHN 179

Query: 170 WTAYEEALKTNPVLAKMVISGVVYSLGDWIAQ---------------------------- 201
           W+AYEEALKTNPVLAKM+ISG+VYS+GDWIAQ                            
Sbjct: 180 WSAYEEALKTNPVLAKMMISGIVYSIGDWIAQCFEGKPLFEFDRARMFRSGLVGFTLHGS 239

Query: 202 ----------ELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELK 251
                     ELFP+++WWVVPAKVAFDQTAW+A WNSIYY V+ LLR + P SI +ELK
Sbjct: 240 LSHFYYQFCEELFPYKEWWVVPAKVAFDQTAWSALWNSIYYTVVALLRRDPPMSILNELK 299

Query: 252 ATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARIAEA 311
           ATF+PMLTAGWKLWPFAHL+TYG++PVEQRLLWVD +ELIWVTILST+SNEKSEAR +++
Sbjct: 300 ATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDTIELIWVTILSTFSNEKSEARNSQS 359

Query: 312 --PAEVKPCLPDISPPEE 327
             P+EVK     + PPEE
Sbjct: 360 MVPSEVKST--SVYPPEE 375

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143057|emb|CBI20352.3| unnamed protein product [Vitis vinifera]

 Score =  346 bits (887), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 173/261 (66%), Positives = 193/261 (73%), Gaps = 39/261 (14%)

Query: 106 GFSSASADERRGN-EEMERLIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRY 164
           GF    + E +G  E++ERLIDR+INATIVLA G+FA+TKLLTID DYWHGWTIFEI+RY
Sbjct: 2   GFWRELSSEGQGEAEDVERLIDRSINATIVLAAGSFAVTKLLTIDADYWHGWTIFEILRY 61

Query: 165 APLHNWTAYEEALKTNPVLAKMVISGVVYSLGDWIAQ----------------------- 201
           AP HNW+AYEEALKTNPV AKMVISGVVYSLGDWIAQ                       
Sbjct: 62  APQHNWSAYEEALKTNPVFAKMVISGVVYSLGDWIAQCYEGKPLFEFDRARMLRSGLVGF 121

Query: 202 ---------------ELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSI 246
                           LFPFQDWWVVPAKVAFDQT WAA WNSIYY V+G LR +SP ++
Sbjct: 122 TLHGSLSHYYYQFCEALFPFQDWWVVPAKVAFDQTLWAAVWNSIYYTVVGFLRFDSPANV 181

Query: 247 FSELKATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEA 306
           F EL+ATFWPMLTAGWKLWPFAHL+TYG++PVEQRLLWVDCVELIWVTILSTYSNEKSEA
Sbjct: 182 FGELRATFWPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEA 241

Query: 307 RIAEAPAEVKPCLPDISPPEE 327
           R++EA AE     P    PE+
Sbjct: 242 RVSEASAEAASNSPPTGSPEK 262

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117242|ref|XP_002317517.1| predicted protein [Populus trichocarpa] gi|222860582|gb|EEE98129.1| predicted protein [Populus trichocarpa]

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 172/233 (73%), Positives = 183/233 (78%), Gaps = 38/233 (16%)

Query: 120 EMERLIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHNWTAYEEALKT 179
           E +RLIDRTINATIVLA GT+AITKLLTID DYWHGWT+FEI+RYAP HNW+AYEEALKT
Sbjct: 1   ESDRLIDRTINATIVLAAGTYAITKLLTIDHDYWHGWTLFEILRYAPQHNWSAYEEALKT 60

Query: 180 NPVLAKMVISGVVYSLGDWIAQ-------------------------------------- 201
           NPVLAKM+ISGVVYS+GDWIAQ                                      
Sbjct: 61  NPVLAKMMISGVVYSVGDWIAQCYEGKPIFEFDRTRMFRSGVVGFTLHGSLSHYYYQFCE 120

Query: 202 ELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTAG 261
           ELFPFQDWWVVP KVAFDQT WAAAWNSIY+ VLG LRLESP SIFSEL ATFWPMLTAG
Sbjct: 121 ELFPFQDWWVVPVKVAFDQTLWAAAWNSIYFTVLGFLRLESPASIFSELTATFWPMLTAG 180

Query: 262 WKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARIAEAPAE 314
           WKLWPFAHL+TYG+VPVEQRLLWVDCVELIWVTILSTYSNEKSEARI+EA  E
Sbjct: 181 WKLWPFAHLITYGVVPVEQRLLWVDCVELIWVTILSTYSNEKSEARISEATVE 233

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224128402|ref|XP_002329153.1| predicted protein [Populus trichocarpa] gi|222869822|gb|EEF06953.1| predicted protein [Populus trichocarpa]

 Score =  341 bits (875), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 169/233 (72%), Positives = 181/233 (77%), Gaps = 38/233 (16%)

Query: 120 EMERLIDRTINATIVLAVGTFAITKLLTIDQDYWHGWTIFEIVRYAPLHNWTAYEEALKT 179
           E ERLIDRTINA IVL  GT+AITKLLTID +YWHGWT+FEI+RYAP HNW+AYEEALKT
Sbjct: 1   ESERLIDRTINAMIVLGAGTYAITKLLTIDHNYWHGWTLFEILRYAPQHNWSAYEEALKT 60

Query: 180 NPVLAKMVISGVVYSLGDWIAQ-------------------------------------- 201
           NPVLAKM+ISG+VYSLGDWIAQ                                      
Sbjct: 61  NPVLAKMMISGIVYSLGDWIAQCYEGKPLFEYDRTRMFRSGLVGFTLHGSLSHYYYQFCE 120

Query: 202 ELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTAG 261
           ELFPFQDWWVVPAKVAFDQT WAAAWNSIY+  LG LRLESP SIFSEL ATFWPMLTAG
Sbjct: 121 ELFPFQDWWVVPAKVAFDQTLWAAAWNSIYFTALGFLRLESPASIFSELTATFWPMLTAG 180

Query: 262 WKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARIAEAPAE 314
           WKLWPFAHL+TYG++PVEQRLLWVDCVELIWVTILSTYSNEKSEARI+EA  E
Sbjct: 181 WKLWPFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARISEAAVE 233

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
TAIR|locus:2011496	366	AT1G52870 "AT1G52870" [Arabido	0.388	0.346	0.781	2.5e-102
TAIR|locus:2128731	361	AT4G03410 "AT4G03410" [Arabido	0.336	0.304	0.781	7.4e-82
SGD|S000004241	197	SYM1 "Protein required for eth	0.360	0.598	0.305	1e-10
ASPGD|ASPL0000060701	188	AN9290 [Emericella nidulans (t	0.305	0.531	0.306	2.2e-10
UNIPROTKB|Q2KIY1	196	PXMP2 "Peroxisomal membrane pr	0.256	0.428	0.25	3.1e-10
DICTYBASE|DDB_G0290223	184	DDB_G0290223 "pmp22 family pro	0.391	0.695	0.311	8e-09
MGI|MGI:97138	176	Mpv17 "MpV17 mitochondrial inn	0.314	0.585	0.276	1.3e-08
FB|FBgn0030481	245	CG1662 [Drosophila melanogaste	0.394	0.526	0.248	1.6e-08
RGD|1310512	176	Mpv17 "MpV17 mitochondrial inn	0.314	0.585	0.276	2e-08
UNIPROTKB|Q5BK62	176	Mpv17 "Protein Mpv17" [Rattus	0.314	0.585	0.276	2e-08

TAIR|locus:2011496 AT1G52870 "AT1G52870" [Arabidopsis thaliana (taxid:3702)]

 Score = 540 (195.1 bits), Expect = 2.5e-102, Sum P(2) = 2.5e-102
 Identities = 100/128 (78%), Positives = 107/128 (83%)

Query:   201 QELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTA 260
             +ELFPFQDWWVVP KVAFDQT W+A WNSIY+ VLG LR ESP SIF ELKATF PMLTA
Sbjct:   239 EELFPFQDWWVVPVKVAFDQTVWSAIWNSIYFTVLGFLRFESPISIFKELKATFLPMLTA 298

Query:   261 GWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARIAEAPAEVKPC-L 319
             GWKLWPFAHL+TYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARI+E+  E      
Sbjct:   299 GWKLWPFAHLITYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARISESVIETSSSST 358

Query:   320 PDISPPEE 327
               I P +E
Sbjct:   359 TTIDPSKE 366

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2128731 AT4G03410 "AT4G03410" [Arabidopsis thaliana (taxid:3702)]

 Score = 497 (180.0 bits), Expect = 7.4e-82, Sum P(2) = 7.4e-82
 Identities = 86/110 (78%), Positives = 99/110 (90%)

Query:   201 QELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTA 260
             + LFPFQ+WWVVPAKVAFDQT W+A WNSIY+ VLGLLR +SP  IFSE+K TF PMLTA
Sbjct:   197 EALFPFQEWWVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIFSEIKTTFLPMLTA 256

Query:   261 GWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARIAE 310
             GWKLWP AHLVTYG++PV+QRLLWVDC+ELIWVTILSTYSNEK+EA+ +E
Sbjct:   257 GWKLWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTYSNEKAEAQASE 306

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

SGD|S000004241 SYM1 "Protein required for ethanol metabolism" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 154 (59.3 bits), Expect = 1.0e-10, P = 1.0e-10
 Identities = 40/131 (30%), Positives = 68/131 (51%)

Query:   184 AKMVISG-VVYS-LGD-W---IAQELF----PFQDWWVVPAKVAFDQTAWAAAWNSIYYM 233
             A+ VI G +++S +GD W   +  +++    P   W  +  +VA DQ A+A      Y+ 
Sbjct:    53 ARAVIYGSLIFSFIGDKWYKILNNKIYMRNRPQYHWSNMVLRVAVDQLAFAPLGLPFYFT 112

Query:   234 VLGLLRLESPFSIFS-ELKATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIW 292
              + ++   S F +   ++K  +WP L   W +WP    + + +VP++ RLL V+ V + W
Sbjct:   113 CMSIMEGRS-FDVAKLKIKEQWWPTLLTNWAVWPLFQAINFSVVPLQHRLLAVNVVAIFW 171

Query:   293 VTILSTYSNEK 303
              T LS Y N K
Sbjct:   172 NTYLS-YKNSK 181

GO:0005743 "mitochondrial inner membrane" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=IEA;ISM

GO:0016020 "membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0006067 "ethanol metabolic process" evidence=IMP

GO:0003674 "molecular_function" evidence=ND

ASPGD|ASPL0000060701 AN9290 [Emericella nidulans (taxid:162425)]

 Score = 151 (58.2 bits), Expect = 2.2e-10, P = 2.2e-10
 Identities = 31/101 (30%), Positives = 54/101 (53%)

Query:   207 QDWWV-VPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTAGWKLW 265
             +++W+ +  K+  DQTA +   N+++ +     R+ S  ++  EL    WP++   WK+W
Sbjct:    88 KEFWLHIFIKLMLDQTAGSFMMNTVFIICTTAARVSSLNTLGVELDRRIWPLILDAWKIW 147

Query:   266 PFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEA 306
             P A L  +  VPV+ R+L   CV   W   LS ++  + EA
Sbjct:   148 PAASLANFLWVPVDWRVLVSSCVGFAWNIFLSIWTLARQEA 188

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|Q2KIY1 PXMP2 "Peroxisomal membrane protein 2" [Bos taurus (taxid:9913)]

 Score = 131 (51.2 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
 Identities = 21/84 (25%), Positives = 47/84 (55%)

Query:   215 KVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTAGWKLWPFAHLVTYG 274
             ++  D+  +A A+ S++++V+  L  +   +  +++K+ FWP L   W++W     +   
Sbjct:   110 RLLLDRLLFAPAFLSLFFLVMNFLEGQDTAAFAAKMKSGFWPALRMNWRVWTPVQFININ 169

Query:   275 LVPVEQRLLWVDCVELIWVTILST 298
              +PV+ R+L+ + V L W   L++
Sbjct:   170 YIPVQFRVLFANLVALFWYAYLAS 193

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0290223 DDB_G0290223 "pmp22 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 137 (53.3 bits), Expect = 8.0e-09, P = 8.0e-09
 Identities = 42/135 (31%), Positives = 63/135 (46%)

Query:   175 EALKTN-PVLAKMVISGVVYS--LGDW--IAQELFP-FQDWWVVPAKVAFDQTAWAAAWN 228
             E  K N   + K  + G++ S  +  W  I   LF   +D +    K+  DQ  +A   N
Sbjct:    49 EKKKINWNAVVKFTVWGLISSPLVHYWHIILDRLFKNIKDKYQSWGKLIVDQLVFAPFIN 108

Query:   229 SIYYMVLGLLRLESPFSIFSELKATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCV 288
               +Y VL +L    P SI  +L    +P L A WK+WP A L+ +  VP   R+L+ + V
Sbjct:   109 IAFYSVLAILD-GKPKSILFKLYFDLFPTLKASWKVWPLAQLINFRFVPSHLRVLFGNLV 167

Query:   289 ELIWVTILSTYSNEK 303
                W   LS  + +K
Sbjct:   168 GFCWGIYLSILATKK 182

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

MGI|MGI:97138 Mpv17 "MpV17 mitochondrial inner membrane protein" [Mus musculus (taxid:10090)]

 Score = 112 (44.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
 Identities = 29/105 (27%), Positives = 48/105 (45%)

Query:   195 LGDW--IAQELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKA 252
             +G W  +   L P         K+  DQ  +A  +   +  ++G+L   S    +++LK 
Sbjct:    66 VGGWYKVLDHLIPGTTKVHALKKMLLDQGGFAPCFLGCFLPLVGILNGMSAQDNWAKLKR 125

Query:   253 TFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILS 297
              +   L   + LWP   L  + LVP+  RL  V CV ++W + LS
Sbjct:   126 DYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAIVWNSYLS 170

GO:0000002 "mitochondrial genome maintenance" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA;IMP

GO:0005743 "mitochondrial inner membrane" evidence=ISO

GO:0005777 "peroxisome" evidence=IDA

GO:0007605 "sensory perception of sound" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IMP

GO:0034614 "cellular response to reactive oxygen species" evidence=IMP

GO:0042592 "homeostatic process" evidence=ISO

GO:0048839 "inner ear development" evidence=IMP

GO:0072593 "reactive oxygen species metabolic process" evidence=IDA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IMP

FB|FBgn0030481 CG1662 [Drosophila melanogaster (taxid:7227)]

 Score = 149 (57.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 33/133 (24%), Positives = 64/133 (48%)

Query:   184 AKMVISGVVYSL--GDW--IAQELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLR 239
             A M ISGV   +    W  +  +  P +   VV  K+  DQ   +  + S +++ LGLL 
Sbjct:   113 AHMAISGVTVGVICHYWYKMLDKRMPGRTMRVVAKKIVLDQLICSPIYISAFFVTLGLLE 172

Query:   240 LESPFSIFSELKATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTY 299
              ++   ++ E+K   W +  A W +WP A  V +  +P   R+ + + + L +  + S  
Sbjct:   173 QKTKHEVWEEIKEKAWKLYAAEWTVWPVAQFVNFYWIPTHYRIFYDNIISLGYDVLTSKV 232

Query:   300 SNEKSEARIAEAP 312
              +++S + + + P
Sbjct:   233 KHKQSHSHLKKIP 245

GO:0005779 "integral to peroxisomal membrane" evidence=ISS

RGD|1310512 Mpv17 "MpV17 mitochondrial inner membrane protein" [Rattus norvegicus (taxid:10116)]

 Score = 110 (43.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
 Identities = 29/105 (27%), Positives = 48/105 (45%)

Query:   195 LGDW--IAQELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKA 252
             +G W  +   L P         K+  DQ  +A  +   +  ++G+L   S    +++LK 
Sbjct:    66 VGGWYRVLDHLIPGTTKVNALKKMLLDQGGFAPCFLGCFLPLVGVLNGMSAQDNWAKLKR 125

Query:   253 TFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILS 297
              +   L   + LWP   L  + LVP+  RL  V CV ++W + LS
Sbjct:   126 DYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVVWNSYLS 170

GO:0000002 "mitochondrial genome maintenance" evidence=IEA;ISO

GO:0005739 "mitochondrion" evidence=ISO

GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO

GO:0005777 "peroxisome" evidence=IEA;ISO

GO:0007605 "sensory perception of sound" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IEA;ISO

GO:0034614 "cellular response to reactive oxygen species" evidence=IEA;ISO

GO:0042592 "homeostatic process" evidence=IEA;ISO

GO:0048839 "inner ear development" evidence=IEA;ISO

GO:0072593 "reactive oxygen species metabolic process" evidence=IEA;ISO

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IEA;ISO

UNIPROTKB|Q5BK62 Mpv17 "Protein Mpv17" [Rattus norvegicus (taxid:10116)]

 Score = 110 (43.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
 Identities = 29/105 (27%), Positives = 48/105 (45%)

Query:   195 LGDW--IAQELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKA 252
             +G W  +   L P         K+  DQ  +A  +   +  ++G+L   S    +++LK 
Sbjct:    66 VGGWYRVLDHLIPGTTKVNALKKMLLDQGGFAPCFLGCFLPLVGVLNGMSAQDNWAKLKR 125

Query:   253 TFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILS 297
              +   L   + LWP   L  + LVP+  RL  V CV ++W + LS
Sbjct:   126 DYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVVWNSYLS 170

GO:0000002 "mitochondrial genome maintenance" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IEA

GO:0034614 "cellular response to reactive oxygen species" evidence=IEA

GO:0042592 "homeostatic process" evidence=IEA

GO:0048839 "inner ear development" evidence=IEA

GO:0072593 "reactive oxygen species metabolic process" evidence=IEA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	327
pfam04117	68	pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family	5e-16

>gnl|CDD|202894 pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family

 Score = 71.1 bits (175), Expect = 5e-16
 Identities = 28/67 (41%), Positives = 39/67 (58%)

Query: 235 LGLLRLESPFSIFSELKATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVT 294
           +GLL  +S   I  +LK  FWP L A WK+WP    + +  VPV  R+L+V+ V + W T
Sbjct: 1   MGLLEGKSLEEIKEKLKEKFWPTLKANWKVWPPVQFINFAFVPVHYRVLFVNLVGIGWNT 60

Query: 295 ILSTYSN 301
            LS  +N
Sbjct: 61  YLSYVNN 67

The 22-kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes. PMP22 seems to be involved in pore forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information. Mpv17 is a closely related peroxisomal protein. In mouse, the Mpv17 protein is involved in the development of early-onset glomerulosclerosis. More recently a homolog of Mpv17 in S. cerevisiae has been been found to be an integral membrane protein of the inner mitochondrial membrane where it has been proposed to have a role in ethanol metabolism and tolerance during heat-shock. Defects in MPV17 is associated with mitochondrial DNA depletion syndrome (MDDS) and Navajo neurohepatopathy (NNH). MDDS is a clinically heterogeneous group of disorders characterized by a reduction in mitochondrial DNA (mtDNA) copy number. Primary mtDNA depletion is inherited as an autosomal recessive trait and may affect single organs, typically muscle or liver, or multiple tissues. Individuals with the hepatocerebral form of mitochondrial DNA depletion syndrome have early progressive liver failure and neurologic abnormalities, hypoglycemia, and increased lactate in body fluids. NNH is an autosomal recessive disease that is prevalent among Navajo children in the South Western states of America. The major clinical features are hepatopathy, peripheral neuropathy, corneal anesthesia and scarring, acral mutilation, cerebral leukoencephalopathy, failure to thrive, and recurrent metabolic acidosis with intercurrent infections. Infantile, childhood, and classic forms of NNH have been described. Mitochondrial DNA depletion was detected in the livers of patients, suggesting a primary defect in mtDNA maintenance. Length = 68

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	327
KOG1944	222	consensus Peroxisomal membrane protein MPV17 and r	99.95
PF04117	68	Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR0	99.87

>KOG1944 consensus Peroxisomal membrane protein MPV17 and related proteins [General function prediction only]

Probab=99.95  E-value=3.2e-27  Score=218.15  Aligned_cols=161  Identities=29%  Similarity=0.546  Sum_probs=142.4

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHhhhhh---------eeechhhhHHHHHHH-HHHHhHHHHHHHHHHHhhcCCCcchhhhh
Q 020347          120 EMERLIDRTINATIVLAVGTFAITKL---------LTIDQDYWHGWTIFE-IVRYAPLHNWTAYEEALKTNPVLAKMVIS  189 (327)
Q Consensus       120 ~~~~i~~~tiqaai~l~a~snvlaQ~---------~tiD~~~~~~ftl~~-Ii~~pPn~lW~~Yle~L~~~PllTK~iTS  189 (327)
                      ...+++...|+.++++.++..+++|.         .+.|+..+.++.+|. ++..|-.+.|-.+++.+            
T Consensus        47 ~~~~~l~~~i~~~~~~~~~~d~~~q~~~~~~~~~~~~~d~~rtlr~~~~G~~f~gp~~~~Wy~~L~~~------------  114 (222)
T KOG1944|consen   47 SLYPLLTKAITTSLLLAAAGDVISQSLEGRSKKLFQTLDLTRTLRMGIFGFLFVGPTLHYWYRLLSKL------------  114 (222)
T ss_pred             hhhhHHHHHHHHHHHHHHhchhhhhhhhhhcccccccccHHHHHHHHhhhhheeccchhHHHHHHHHH------------
Confidence            45588889999999777888899887         367778899999999 56667789998887752            


Q ss_pred             hhhhccccccccccccCCchhhhHHHHHHhhhchhhHHHHHHHHHHHHhcCCChhhHHHHHHhhhHHHHhccceechhhh
Q 020347          190 GVVYSLGDWIAQELFPFQDWWVVPAKVAFDQTAWAAAWNSIYYMVLGLLRLESPFSIFSELKATFWPMLTAGWKLWPFAH  269 (327)
Q Consensus       190 gvl~~~GD~iAQ~l~P~l~w~nv~~KVllDQtV~sPv~~~~Ff~~~~lLeG~s~~~i~~~lk~~f~p~l~a~wk~WPpvq  269 (327)
                                    .|..+..++++|+++||++++|+.+.+||.+|++++|++.++++++++++|||++++||++||++|
T Consensus       115 --------------~p~~~~~~~~~kvl~dql~~~P~~~~~ff~~~~~legk~~~~~~~~~~~~~~p~l~~~~~~WP~~q  180 (222)
T KOG1944|consen  115 --------------FPKKTLITVVKKVLLDQLVFAPLFIVVFFLLMGLLEGKTNEEAKAKLKRKFWPTLKANWMVWPLVQ  180 (222)
T ss_pred             --------------ccCccHHHHHHHHHHhhhhhchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhhheecchhh
Confidence                          233445688999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhheecccCCchhhhhhHHHHHHHHHHhhhcccchhh
Q 020347          270 LVTYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEA  306 (327)
Q Consensus       270 lVNF~fVP~~~RvLfvn~Vgl~Wn~yLS~~ank~~~a  306 (327)
                      ++||.|||+++|++|+|+++++|++|||++++++.+.
T Consensus       181 ~inF~~VP~~~rvl~~~~vsl~W~~~Ls~~~~~~~~~  217 (222)
T KOG1944|consen  181 FINFRLVPLQYRVLFVNIVSLVWNTYLSYKNASLVEL  217 (222)
T ss_pred             eeeeEEccccceehhhhhHHHHHHHHHHHHhhccccc
Confidence            9999999999999999999999999999999887433

>PF04117 Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR007248 The 22 kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes

Probab=99.87  E-value=4.8e-23  Score=157.15  Aligned_cols=68  Identities=41%  Similarity=0.778  Sum_probs=66.3

Q ss_pred             HHHhcCCChhhHHHHHHhhhHHHHhccceechhhhhhheecccCCchhhhhhHHHHHHHHHHhhhccc
Q 020347          235 LGLLRLESPFSIFSELKATFWPMLTAGWKLWPFAHLVTYGLVPVEQRLLWVDCVELIWVTILSTYSNE  302 (327)
Q Consensus       235 ~~lLeG~s~~~i~~~lk~~f~p~l~a~wk~WPpvqlVNF~fVP~~~RvLfvn~Vgl~Wn~yLS~~ank  302 (327)
                      |++++|++++++++++|++|+++++++|++||++|++||.+||+++|++|+|+|+++|++|||+++||
T Consensus         1 Mg~l~g~s~~~~~~~l~~~~~~~~~~~~~~Wp~~~~vnF~~vP~~~Rv~~~~~v~~~W~~~LS~~~~r   68 (68)
T PF04117_consen    1 MGLLEGKSWEEIKEKLKRDYWPTLKASWKFWPPAQIVNFRYVPPHYRVLFVNVVSFFWNTYLSYIANR   68 (68)
T ss_pred             CCcccCCCHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHhcccChhhhhhhhhhHHHHHHHHHHHHhcC
Confidence            68899999999999999999999999999999999999999999999999999999999999999875

PMP22 seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information []. Mpv17 is a closely related peroxisomal protein involved in the development of early-onset glomerulosclerosis []. A member of this family found in Saccharomyces cerevisiae (Baker's yeast) is an integral membrane protein of the inner mitochondrial membrane and has been suggested to play a role in mitochondrial function during heat shock [].; GO: 0016021 integral to membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00