Citrus Sinensis ID: 020354

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------
Protein Sequence
MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTPQVKNQAQPIIKPFTQYHHLHYPCKQELELQYNMSHIHHHDAFLQLPQLESPKVPQSTAGVSCNSVVPYAYDRATLQSSTLTQEDQHSTQQGHQAQDLNSSLYSNNNNDQAVDQVTDWRVLDKFVASQLSHEDAFKENNYSNAAADHFHVDEQMNMQGNGSNTRVEIAQEYASTSTSSCQIDLWK
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHHHHHHHcccccccccEEcccccccccccccHHcccccccccEEEEEccccccccccccccccccccccccccccccccccccEEEEEEEEEEcccccccccccccEEEEEEccccccccccccccccEEEccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccHHHHHHHHHHHHHccccccccEEEHEccccccccccHHHccccccccccEEEEccccccccccccccHHcccccEEEccccccEEccccEEEEEEEEEEEcccccccccccEEEEEEEcccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mnsfshvppgfrfhptdEELVDYYLRKKVAskridldvikdvdlykiepwdLQELCKigseeqnewyffshkdkkyptgtrtnratkagfwkatgrdkaiysRHSLIGMRKTLVFykgrapngqksdWIMHEYRletnengtpqvknqaqpiikpftqyhhlhypckqeLELQynmshihhhdaflqlpqlespkvpqstagvscnsvvpyaydratlqsstltqedqhstqqghqaqdlnsslysnnnndqavdqvTDWRVLDKFVASQlshedafkennysnaaadhfhvdeqmnmqgngsNTRVEIAQEYAststsscqidlwk
Flexible Loop (DISEMBL)
mnsfshvppgfrfhptdeELVDYYLRKkvaskridldvikdvdlykiePWDLQELCKIGSEEQNEWyffshkdkkyptgtrtnratkagfwkatgrdkaiysrhsliGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTPQVKNQAQPIIKPFTQYHHLHYPCKQELELQYNMSHIHHHDAFLQLPQLESPKVPQSTAGVSCNSVVPYAYDRATLQSSTLTQEDQHSTQQGHQAQDLNSSLYSNNNNDQAVDQVTDWRVLDKFVASQLSHEDAFKENNYSNAAADHFHVDEQMNMQGNGSNTRVEIAQEyaststsscqidlwk
Low Complexity Region (SEG)
MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTPQVKNQAQPIIKPFTQYHHLHYPCKQELELQYNMSHIHHHDAFLQLPQLESPKVPQSTAGVSCNSVVPYAYDRATLQSSTLTQEDQHSTQQGHQAQDlnsslysnnnnDQAVDQVTDWRVLDKFVASQLSHEDAFKENNYSNAAADHFHVDEQMNMQGNGSNTRVEIAQEYASTSTSSCQIDLWK
Disordered region (IsUnstruct)
**********FRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE************AQPIIKPFTQYHHLHYPCKQELELQYNMSHIHHHDAFLQLP************GVSCNSVVPYAYDR**************************************VDQVTDWRVLDKFVASQL********************************************************
Disordered Region (DISOPRED)
****SHV*PGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYR***************QPIIKPFTQ**************************************************************************************************VTDWRVLDKFV*****************************************************CQIDLWK
Disordered Region (DISEMBL)
MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTPQVKNQAQPIIKPFTQYHHLHYPCKQELELQYNMSHIHHHDAFLQLPQLES*********VSCNSVVPYAYDRATLQ*******************DLNSSLYSNNNNDQAVDQVTDWRVLDKFVASQLSHEDAFKENNYSNAAADHFHVDEQMNMQGNGSNTRVEIAQE***************
Disordered Region (DISPRO)
*****HVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTPQVKNQAQPIIKPFTQYH***********************************************************************************************QVTDWRVLDKFVASQLS*******************************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTPQVKNQAQPIIKPFTQYHHLHYPCKQELELQYNMSHIHHHDAFLQLPQLESPKVPQSTAGVSCNSVVPYAYDRATLQSSTLTQEDQHSTQQGHQAQDLNSSLYSNNNNDQAVDQVTDWRVLDKFVASQLSHEDAFKENNYSNAAADHFHVDEQMNMQGNGSNTRVEIAQEYASTSTSSCQIDLWK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	327	2.2.26 [Sep-21-2011]
Q9FWX2	395	NAC domain-containing pro	no	no	0.342	0.283	0.937	3e-81
Q84WP6	365	NAC domain-containing pro	no	no	0.422	0.378	0.797	5e-64
Q9M274	334	NAC domain-containing pro	no	no	0.415	0.407	0.757	9e-62
Q9LPI7	358	NAC domain-containing pro	no	no	0.415	0.379	0.779	3e-60
Q9SV87	341	Protein BEARSKIN1 OS=Arab	no	no	0.397	0.381	0.761	5e-59
Q9C878	305	Protein BEARSKIN1 OS=Arab	no	no	0.409	0.439	0.738	2e-58
Q5Z6B6	276	NAC domain-containing pro	no	no	0.403	0.478	0.759	1e-57
Q9MA17	371	Protein SOMBRERO OS=Arabi	no	no	0.467	0.412	0.656	6e-57
Q9FLJ2	336	NAC domain-containing pro	no	no	0.388	0.377	0.630	2e-46
O04017	375	Protein CUP-SHAPED COTYLE	no	no	0.391	0.341	0.609	2e-44

>sp|Q9FWX2|NAC7_ARATH NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2

 Score =  301 bits (772), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 135/144 (93%), Positives = 141/144 (97%)

Query: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
           MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRI++D IKD+DLYKIEPWDLQELCKIG 
Sbjct: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGH 60

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
           EEQ++WYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIY RHSLIGMRKTLVFYKGRA
Sbjct: 61  EEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETNENGTPQ 144
           PNGQKSDWIMHEYRLET+ENGTPQ
Sbjct: 121 PNGQKSDWIMHEYRLETDENGTPQ 144

Transcription factor probably involved in xylem formation.
Arabidopsis thaliana (taxid: 3702)

>sp|Q84WP6|NAC43_ARATH NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2

 Score =  244 bits (624), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 110/138 (79%), Positives = 121/138 (87%)

Query: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
           +N  S VPPGFRFHPT+EEL+ YYLRKKV S  IDLDVI+DVDL K+EPWD+QE+CKIG+
Sbjct: 10  VNGQSQVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDIQEMCKIGT 69

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
             QN+WYFFSHKDKKYPTGTRTNRAT AGFWKATGRDK IYS    IGMRKTLVFYKGRA
Sbjct: 70  TPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRKTLVFYKGRA 129

Query: 121 PNGQKSDWIMHEYRLETN 138
           P+GQKSDWIMHEYRL+ N
Sbjct: 130 PHGQKSDWIMHEYRLDDN 147

Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST2 and NST3, required for the secondary cell wall thickening of sclerenchymatous fibers, secondary xylem (tracheary elements), and of the anther endocethium, which is necessary for anther dehiscence. May also regulates the secondary cell wall lignification of other tissues.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M274|NAC66_ARATH NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1

 Score =  237 bits (605), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 103/136 (75%), Positives = 120/136 (88%)

Query: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
           +N  S VPPGFRFHPT+EEL+ YYLRKK+++ +IDLDVI D+DL K+EPWD+QE+CKIG+
Sbjct: 5   VNGQSQVPPGFRFHPTEEELLKYYLRKKISNIKIDLDVIPDIDLNKLEPWDIQEMCKIGT 64

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
             QN+WYF+SHKDKKYPTGTRTNRAT  GFWKATGRDK IY+    IGMRKTLVFYKGRA
Sbjct: 65  TPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDRIGMRKTLVFYKGRA 124

Query: 121 PNGQKSDWIMHEYRLE 136
           P+GQKSDWIMHEYRL+
Sbjct: 125 PHGQKSDWIMHEYRLD 140

Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST1, required for the secondary cell wall thickening of the anther endocethium, which is necessary for anther dehiscence. May also regulates the secondary cell wall lignification of other tissues such as tracheary elements.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPI7|NAC12_ARATH NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1

 Score =  232 bits (592), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 106/136 (77%), Positives = 120/136 (88%)

Query: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
           +N  S VPPGFRFHPT+EEL+ YYLRKKV S++IDLDVI++VDL K+EPWD+QE C+IGS
Sbjct: 10  INGQSKVPPGFRFHPTEEELLHYYLRKKVNSQKIDLDVIREVDLNKLEPWDIQEECRIGS 69

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
             QN+WYFFSHKDKKYPTGTRTNRAT AGFWKATGRDK I S    IG+RKTLVFYKGRA
Sbjct: 70  TPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSCVRRIGLRKTLVFYKGRA 129

Query: 121 PNGQKSDWIMHEYRLE 136
           P+GQKSDWIMHEYRL+
Sbjct: 130 PHGQKSDWIMHEYRLD 145

Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST1, required for the secondary cell wall thickening and lignification of sclerenchymatous fibers and secondary xylem vessels (tracheary elements). Seems to repress the secondary cell wall thickening of xylary fibers. May also regulates the secondary cell wall lignification of other tissues. Binds to and activates the promoter of MYB46.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SV87|BRN2_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1

 Score =  228 bits (581), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 99/130 (76%), Positives = 117/130 (90%)

Query: 7   VPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEW 66
           VPPGFRFHPTDEEL+ YYL+KK++ ++ +++VI++VDL K+EPWDLQE CKIGS  QNEW
Sbjct: 9   VPPGFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDLNKLEPWDLQERCKIGSTPQNEW 68

Query: 67  YFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKS 126
           YFFSHKD+KYPTG+RTNRAT AGFWKATGRDK I + +  IGMRKTLVFYKGRAP+GQK+
Sbjct: 69  YFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQKT 128

Query: 127 DWIMHEYRLE 136
           DWIMHEYRLE
Sbjct: 129 DWIMHEYRLE 138

Transcription activator. Together with BRN1 and SMB, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C878|BRN1_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1

 Score =  226 bits (576), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 99/134 (73%), Positives = 119/134 (88%)

Query: 7   VPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEW 66
           VPPGFRFHPTDEEL+ YYL+KK++ ++ +++VIK+VDL KIEPWDLQ+ CKIGS  QNEW
Sbjct: 8   VPPGFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDLNKIEPWDLQDRCKIGSTPQNEW 67

Query: 67  YFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKS 126
           YFFSHKD+KYPTG+RTNRAT +GFWKATGRDK I + +  IGMRKTLVFYKGRAP+GQK+
Sbjct: 68  YFFSHKDRKYPTGSRTNRATHSGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQKT 127

Query: 127 DWIMHEYRLETNEN 140
           DWIMHEYR+E  E+
Sbjct: 128 DWIMHEYRIEDTED 141

Transcription activator. Together with SMB and BRN2, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5Z6B6|NAC76_ORYSJ NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2

 Score =  223 bits (568), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 101/133 (75%), Positives = 119/133 (89%), Gaps = 1/133 (0%)

Query: 7   VPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEW 66
           VPPGFRFHPTDEEL+ YYLRKKVA + IDLDVI+++DL K+EPWDL++ C+IG+  QNEW
Sbjct: 10  VPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGPQNEW 69

Query: 67  YFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSL-IGMRKTLVFYKGRAPNGQK 125
           YFFSHKDKKYPTGTRTNRAT AGFWKATGRDKAI+  ++  IGMRKTLVFY GRAP+G+K
Sbjct: 70  YFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAPHGKK 129

Query: 126 SDWIMHEYRLETN 138
           +DWIMHEYRL+ +
Sbjct: 130 TDWIMHEYRLDQD 142

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9MA17|SMB_ARATH Protein SOMBRERO OS=Arabidopsis thaliana GN=SMB PE=1 SV=1

 Score =  221 bits (563), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 103/157 (65%), Positives = 129/157 (82%), Gaps = 4/157 (2%)

Query: 7   VPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEW 66
           VPPGFRFHPT+EEL+ YYL+KKV+ + IDLDVI++VDL K+EPW+L+E C+IGS  QNEW
Sbjct: 17  VPPGFRFHPTEEELLYYYLKKKVSYEPIDLDVIREVDLNKLEPWELKEKCRIGSGPQNEW 76

Query: 67  YFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHS-LIGMRKTLVFYKGRAPNGQK 125
           YFFSHKDKKYPTGTRTNRAT AGFWKATGRDK+I+   S  IG+RKTLVFY GRAP+GQK
Sbjct: 77  YFFSHKDKKYPTGTRTNRATAAGFWKATGRDKSIHLNSSKKIGLRKTLVFYTGRAPHGQK 136

Query: 126 SDWIMHEYRLETNENGTPQVKNQAQPIIKPFTQYHHL 162
           ++WIMHEYRL+ +EN   +++     + + F + +H 
Sbjct: 137 TEWIMHEYRLDDSEN---EIQEDGWVVCRVFKKKNHF 170

Transcription regulator. Together with BRN1 and BRN2, regulates cellular maturation of root cap. Represses stem cell-like divisions in the root cap daughter cells, and thus promotes daughter cell fate. Inhibits expression of its positive regulator FEZ in a feedback loop for controlled switches in cell division plane. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score =  186 bits (473), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 82/130 (63%), Positives = 101/130 (77%), Gaps = 3/130 (2%)

Query: 7   VPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEW 66
           +PPGFRFHPTDEEL+ +YL KKV         I +VDL K EPW+L  + K+G   + EW
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMG---EKEW 72

Query: 67  YFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKS 126
           YFF  +D+KYPTG RTNRAT+AG+WKATG+DK IY   SL+GM+KTLVFY+GRAP GQK+
Sbjct: 73  YFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGQKT 132

Query: 127 DWIMHEYRLE 136
           +W+MHEYRLE
Sbjct: 133 NWVMHEYRLE 142

Arabidopsis thaliana (taxid: 3702)

>sp|O04017|NAC98_ARATH Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1

 Score =  179 bits (455), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 81/133 (60%), Positives = 102/133 (76%), Gaps = 5/133 (3%)

Query: 6   HVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNE 65
           ++PPGFRFHPTDEEL+ +YL +KV         I +VDL K EPW L    K+G   + E
Sbjct: 16  YLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMG---EKE 72

Query: 66  WYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHS--LIGMRKTLVFYKGRAPNG 123
           WYFFS +D+KYPTG RTNRAT+AG+WKATG+D+ I+S  +  L+GM+KTLVFYKGRAP G
Sbjct: 73  WYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKG 132

Query: 124 QKSDWIMHEYRLE 136
           +KS+W+MHEYRLE
Sbjct: 133 EKSNWVMHEYRLE 145

Transcription activator of STM and KNAT6. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for the fusion of septa of gynoecia along the length of the ovaries. Activates the shoot formation in callus in a STM-dependent manner. Controls leaf margin development and required for leaf serration. Involved in axillary meristem initiation and separation of the meristem from the main stem. Regulates the phyllotaxy throughout the plant development. Seems to act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
359474377	446	PREDICTED: NAC domain-containing protein	0.963	0.706	0.713	1e-137
224074695	356	NAC domain protein, IPR003441 [Populus t	0.963	0.884	0.711	1e-135
255583632	359	NAC domain-containing protein, putative	0.966	0.880	0.716	1e-134
327397088	356	transcription factor [Populus trichocarp	0.963	0.884	0.711	1e-134
224124996	356	NAC domain protein, IPR003441 [Populus t	0.963	0.884	0.701	1e-133
327397086	356	transcription factor [Populus trichocarp	0.963	0.884	0.701	1e-133
297741148	320	unnamed protein product [Vitis vinifera]	0.862	0.881	0.649	1e-121
359490199	359	PREDICTED: NAC domain-containing protein	0.975	0.888	0.632	1e-119
356540408	356	PREDICTED: LOW QUALITY PROTEIN: NAC doma	0.935	0.859	0.628	1e-119
356563294	370	PREDICTED: NAC domain-containing protein	0.941	0.832	0.620	1e-116

>gi|359474377|ref|XP_002264342.2| PREDICTED: NAC domain-containing protein 7-like [Vitis vinifera]

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 262/367 (71%), Positives = 282/367 (76%), Gaps = 52/367 (14%)

Query: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
           MN+FSHVPPGFRFHPTDEELVDYYLRKKVAS+RIDLDVIKDVDLYKIEPWDLQELCKIG+
Sbjct: 1   MNTFSHVPPGFRFHPTDEELVDYYLRKKVASRRIDLDVIKDVDLYKIEPWDLQELCKIGT 60

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
           EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIY +HSLIGMRKTLVFYKGRA
Sbjct: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYCKHSLIGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETNENGTPQ-------------------VKNQAQP---------- 151
           PNGQKSDWIMHEYRLETNENGTPQ                   V     P          
Sbjct: 121 PNGQKSDWIMHEYRLETNENGTPQEEGWVVCRVFKKRMATMRKVGEHGSPCWYDDQVSFM 180

Query: 152 --------IIKPFTQYHHLHYPCKQELELQYNMSHIHHHDAFLQLPQLESPKVPQSTAGV 203
                   I +P+T + H HY CKQELEL YNM H    D +LQLPQLESPK+PQS A V
Sbjct: 181 PDLDSPRRISQPYTSFQH-HYSCKQELELPYNMPH----DPYLQLPQLESPKLPQSAASV 235

Query: 204 SCNSVVPYAYDR---ATLQSSTLTQEDQHSTQQGHQAQDLNSSLYSNNNNDQAVDQVTDW 260
           SCNSV PY +DR   +TLQSSTLTQE+    QQ +Q Q++ SSLYS +NN+QAVDQVTDW
Sbjct: 236 SCNSVAPYGFDRHNGSTLQSSTLTQEEH--IQQSYQ-QNM-SSLYS-SNNEQAVDQVTDW 290

Query: 261 RVLDKFVASQLSH-EDAFKENNYSNAAADHFHVDEQMNMQGNGSNTRVEIAQEYASTSTS 319
           RVLDKFVASQLSH +DA KE NYSNAA   FHV + MN+  N S  R EI QEYASTSTS
Sbjct: 291 RVLDKFVASQLSHDQDASKETNYSNAAVPTFHVADHMNLLVNDSK-RPEIPQEYASTSTS 349

Query: 320 SCQIDLW 326
           SCQIDLW
Sbjct: 350 SCQIDLW 356

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074695|ref|XP_002304428.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222841860|gb|EEE79407.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|312618434|gb|ADR00337.1| wood-associated NAC domain transcription factor 4B [Populus trichocarpa]

 Score =  486 bits (1251), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 262/368 (71%), Positives = 278/368 (75%), Gaps = 53/368 (14%)

Query: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
           MN+FSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCK+G+
Sbjct: 1   MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKLGT 60

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
           E+QNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA
Sbjct: 61  EDQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETNENGTPQVK---------------------------------- 146
           PNGQKSD IMHEYRLETNENGTPQ K                                  
Sbjct: 121 PNGQKSDLIMHEYRLETNENGTPQAKGWVVCRVFKKKMPTMRKVSDYDSPCWYDDQVSFM 180

Query: 147 ---NQAQPIIKPFTQYHHLHYPCKQELELQYNMSHIHHHDAFLQLPQLESPKVPQSTAGV 203
              +  + I +P+  Y H HY CKQELEL YNM     HD FLQLPQLESPKVPQS A  
Sbjct: 181 PETDSPRRISQPYASYLH-HYTCKQELELPYNMP----HDPFLQLPQLESPKVPQSAATA 235

Query: 204 SCNSVVPYAYDR---ATLQSSTLTQEDQHSTQQGHQAQDLNSSLYSNNNNDQAVDQVTDW 260
           SCNSV+ YAYDR   +TLQSSTLTQE+Q   QQ HQ    +    +NNN++QAVDQVTDW
Sbjct: 236 SCNSVIAYAYDRTNGSTLQSSTLTQEEQ--MQQCHQQNLNSFY--NNNNSEQAVDQVTDW 291

Query: 261 RVLDKFVASQLSHEDAFK-ENNYSNAAADHFHVDEQMNMQGNGSNTRVEIAQEYASTSTS 319
           RVLDKFVASQLSHEDA K  NNYSN A   FH  EQM+M  N S  R E AQEYASTSTS
Sbjct: 292 RVLDKFVASQLSHEDASKGTNNYSNKAT--FHAAEQMHMLANDSK-RSETAQEYASTSTS 348

Query: 320 SCQIDLWK 327
           SCQIDLWK
Sbjct: 349 SCQIDLWK 356

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255583632|ref|XP_002532571.1| NAC domain-containing protein, putative [Ricinus communis] gi|223527698|gb|EEF29805.1| NAC domain-containing protein, putative [Ricinus communis]

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 265/370 (71%), Positives = 284/370 (76%), Gaps = 54/370 (14%)

Query: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKI-G 59
           MN+FSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKI G
Sbjct: 1   MNAFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIPG 60

Query: 60  SEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGR 119
           +EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIY+RHSLIGMRKTLVFYKGR
Sbjct: 61  TEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYARHSLIGMRKTLVFYKGR 120

Query: 120 APNGQKSDWIMHEYRLETNENGTPQ--------VKNQAQP-------------------- 151
           APNGQKSDWIMHEYRLETNENGTPQ        V  +  P                    
Sbjct: 121 APNGQKSDWIMHEYRLETNENGTPQEEGWVVCRVFKKRMPTVRKVGEYDSPCWYDDQVSF 180

Query: 152 ---------IIKPFTQYHHLHYPCKQELEL-QYNMSHIHHHDAFLQLPQLESPKVPQSTA 201
                    I +P+  + H HYPCKQE EL QY++     HD FLQLPQLESPKVPQS A
Sbjct: 181 MPELDSPRRITQPYATFLH-HYPCKQEFELQQYSIP----HDPFLQLPQLESPKVPQSAA 235

Query: 202 GVSCNSVVPYAYDR---ATLQSSTLTQEDQHSTQQGHQAQDLNSSLYSNNNNDQAVDQVT 258
             +C SVVPY YDR   +TLQSSTLTQE+Q   QQ H  Q+LN S+Y +NN +QAVDQVT
Sbjct: 236 SANCGSVVPYGYDRNNGSTLQSSTLTQEEQ--VQQTHH-QNLN-SIY-HNNGEQAVDQVT 290

Query: 259 DWRVLDKFVASQLSHED-AFKENNYSNAAADHFHVDEQMNMQGNGSNTRVEIAQEYASTS 317
           DWRVLDKFVASQLSHED A KE NYSNAAA  FHV +QMN+  N S  R E+ QEYASTS
Sbjct: 291 DWRVLDKFVASQLSHEDNASKEGNYSNAAAAAFHVAQQMNLLANESK-RPELVQEYASTS 349

Query: 318 TSSCQIDLWK 327
            SSCQIDLWK
Sbjct: 350 RSSCQIDLWK 359

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|327397088|dbj|BAK14361.1| transcription factor [Populus trichocarpa]

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 262/368 (71%), Positives = 278/368 (75%), Gaps = 53/368 (14%)

Query: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
           MN+FSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCK+G+
Sbjct: 1   MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKLGT 60

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
           E+QNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA
Sbjct: 61  EDQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETNENGTPQ--------VKNQAQPIIK------------------ 154
           PNGQKSD IMHEYRLETNENGTPQ        V  +  P ++                  
Sbjct: 121 PNGQKSDLIMHEYRLETNENGTPQEEGWVVCRVFKKKMPTMRKVSDYDSPCWYDDQVSFM 180

Query: 155 -----------PFTQYHHLHYPCKQELELQYNMSHIHHHDAFLQLPQLESPKVPQSTAGV 203
                      P+  Y H HY CKQELEL YNM     HD FLQLPQLESPKVPQS A  
Sbjct: 181 PETDSPRRISQPYASYLH-HYTCKQELELPYNMP----HDPFLQLPQLESPKVPQSAATA 235

Query: 204 SCNSVVPYAYDR---ATLQSSTLTQEDQHSTQQGHQAQDLNSSLYSNNNNDQAVDQVTDW 260
           SCNSV+ YAYDR   +TLQSSTLTQE+Q   QQ HQ    +    +NNN++QAVDQVTDW
Sbjct: 236 SCNSVIAYAYDRTNGSTLQSSTLTQEEQ--MQQCHQQNLNSFY--NNNNSEQAVDQVTDW 291

Query: 261 RVLDKFVASQLSHEDAFK-ENNYSNAAADHFHVDEQMNMQGNGSNTRVEIAQEYASTSTS 319
           RVLDKFVASQLSHEDA K  NNYSN A   FH  EQM+M  N S  R E AQEYASTSTS
Sbjct: 292 RVLDKFVASQLSHEDASKGTNNYSNKAT--FHAAEQMHMLANDSK-RSETAQEYASTSTS 348

Query: 320 SCQIDLWK 327
           SCQIDLWK
Sbjct: 349 SCQIDLWK 356

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124996|ref|XP_002329865.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222871102|gb|EEF08233.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|312618432|gb|ADR00336.1| wood-associated NAC domain transcription factor 4A [Populus trichocarpa]

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 258/368 (70%), Positives = 279/368 (75%), Gaps = 53/368 (14%)

Query: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
           MN+FSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCK+G+
Sbjct: 1   MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKLGT 60

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
           E+QNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSL+GMRKTLVFYKGRA
Sbjct: 61  EDQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLVGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETNENGTPQVK---------------------------------- 146
           PNGQKSDWIMHEYRLETNENG PQ K                                  
Sbjct: 121 PNGQKSDWIMHEYRLETNENGIPQAKGWVVCRVFKKRMPTMRKVGDYDSPCWYDDQVSFM 180

Query: 147 ---NQAQPIIKPFTQYHHLHYPCKQELELQYNMSHIHHHDAFLQLPQLESPKVPQSTAGV 203
              +  + I +P+  YHH HY CKQELELQYNM     HD FLQLPQLESPKVPQS A  
Sbjct: 181 PEIDSPRRISQPYAPYHH-HYHCKQELELQYNMP----HDPFLQLPQLESPKVPQSAATA 235

Query: 204 SCNSVVPYAYDRA---TLQSSTLTQEDQHSTQQGHQAQDLNSSLYSNNNNDQAVDQVTDW 260
           SCNSV+ Y +DR    TLQSSTLTQE++   QQ HQ    +    +NNN++QAVDQVTDW
Sbjct: 236 SCNSVIAYGFDRTNGNTLQSSTLTQEEK--MQQCHQQNLNSLH--NNNNSEQAVDQVTDW 291

Query: 261 RVLDKFVASQLSHEDAFK-ENNYSNAAADHFHVDEQMNMQGNGSNTRVEIAQEYASTSTS 319
           RVLDKFVASQLSHEDA K  NN+S+ A   F+  EQMNM  N S  R EIAQ+YASTSTS
Sbjct: 292 RVLDKFVASQLSHEDASKGTNNFSSTAT--FNEAEQMNMLANESK-RSEIAQQYASTSTS 348

Query: 320 SCQIDLWK 327
           SCQIDLWK
Sbjct: 349 SCQIDLWK 356

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|327397086|dbj|BAK14360.1| transcription factor [Populus trichocarpa]

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 258/368 (70%), Positives = 279/368 (75%), Gaps = 53/368 (14%)

Query: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
           MN+FSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCK+G+
Sbjct: 1   MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKLGT 60

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
           E+QNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSL+GMRKTLVFYKGRA
Sbjct: 61  EDQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLVGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETNENGTPQ--------VKNQAQPIIK------------------ 154
           PNGQKSDWIMHEYRLETNENG PQ        V  +  P ++                  
Sbjct: 121 PNGQKSDWIMHEYRLETNENGIPQEEGWVVCRVFKKRMPTMRKVGDYDSPCWYDDQVSFM 180

Query: 155 -----------PFTQYHHLHYPCKQELELQYNMSHIHHHDAFLQLPQLESPKVPQSTAGV 203
                      P+  YHH HY CKQELELQYNM     HD FLQLPQLESPKVPQS A  
Sbjct: 181 PEIDSPRRISQPYAPYHH-HYHCKQELELQYNMP----HDPFLQLPQLESPKVPQSAATA 235

Query: 204 SCNSVVPYAYDRA---TLQSSTLTQEDQHSTQQGHQAQDLNSSLYSNNNNDQAVDQVTDW 260
           SCNSV+ Y +DR    TLQSSTLTQE++   QQ HQ    +    +NNN++QAVDQVTDW
Sbjct: 236 SCNSVIAYGFDRTNGNTLQSSTLTQEEK--MQQCHQQNLNSLH--NNNNSEQAVDQVTDW 291

Query: 261 RVLDKFVASQLSHEDAFK-ENNYSNAAADHFHVDEQMNMQGNGSNTRVEIAQEYASTSTS 319
           RVLDKFVASQLSHEDA K  NN+S+ A   F+  EQMNM  N S  R EIAQ+YASTSTS
Sbjct: 292 RVLDKFVASQLSHEDASKGTNNFSSTAT--FNEAEQMNMLANESK-RSEIAQQYASTSTS 348

Query: 320 SCQIDLWK 327
           SCQIDLWK
Sbjct: 349 SCQIDLWK 356

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741148|emb|CBI31879.3| unnamed protein product [Vitis vinifera]

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/365 (64%), Positives = 255/365 (69%), Gaps = 83/365 (22%)

Query: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
           MN+FSHVPPGFRFHPTDEELVDYYLRKKVAS+RIDLDVIKDVDLYKIEPWDLQELCKIG+
Sbjct: 1   MNTFSHVPPGFRFHPTDEELVDYYLRKKVASRRIDLDVIKDVDLYKIEPWDLQELCKIGT 60

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
           EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIY +HSLIGMRKTLVFYKGRA
Sbjct: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYCKHSLIGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETNENGTPQVK---------------------------------- 146
           PNGQKSDWIMHEYRLETNENGTPQ K                                  
Sbjct: 121 PNGQKSDWIMHEYRLETNENGTPQAKGWVVCRVFKKRMATMRKVGEHGSPCWYDDQVSFM 180

Query: 147 ---NQAQPIIKPFTQYHHLHYPCKQELELQYNMSHIHHHDAFLQLPQLESPKVPQSTAGV 203
              +  + I +P+T + H HY CKQELEL YNM     HD +LQLPQLESPK+P      
Sbjct: 181 PDLDSPRRISQPYTSFQH-HYSCKQELELPYNMP----HDPYLQLPQLESPKLP------ 229

Query: 204 SCNSVVPYAYDRATLQSSTLTQEDQHSTQQGHQAQDLNSSLYSNNNNDQAVDQVTDWRVL 263
                                          H  Q++ SSLYS +NN+QAVDQVTDWRVL
Sbjct: 230 -------------------------------HYQQNM-SSLYS-SNNEQAVDQVTDWRVL 256

Query: 264 DKFVASQLSH-EDAFKENNYSNAAADHFHVDEQMNMQGNGSNTRVEIAQEYASTSTSSCQ 322
           DKFVASQLSH +DA KE NYSNAA   FHV + MN+  N S  R EI QEYASTSTSSCQ
Sbjct: 257 DKFVASQLSHDQDASKETNYSNAAVPTFHVADHMNLLVNDSK-RPEIPQEYASTSTSSCQ 315

Query: 323 IDLWK 327
           IDLWK
Sbjct: 316 IDLWK 320

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490199|ref|XP_002264986.2| PREDICTED: NAC domain-containing protein 7-like [Vitis vinifera]

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/367 (63%), Positives = 266/367 (72%), Gaps = 48/367 (13%)

Query: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
           MN+F+HVPPGFRFHPTDEELVDYYLRKKV S+RIDLDVIKDVDLYKIEPWDLQELC+IG+
Sbjct: 1   MNTFAHVPPGFRFHPTDEELVDYYLRKKVTSRRIDLDVIKDVDLYKIEPWDLQELCRIGT 60

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
           +EQNEWYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKAIYS+H LIGMRKTLVFYKGRA
Sbjct: 61  DEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRA 120

Query: 121 PNGQKSDWIMHEYRLETNENGTPQ--------VKNQAQPIIKPFTQY------------- 159
           PNGQKSDWIMHEYRLET+ENGTPQ        V  +    ++  +++             
Sbjct: 121 PNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRIATVRKMSEHESPCWYDDQVSFM 180

Query: 160 ---------------HHLHYPCKQELELQYNMSHIHHHDAFLQLPQLESPKVPQSTA-GV 203
                          +HL Y CK+E++LQY +     H+ FLQLP LESPK+ Q+ A  V
Sbjct: 181 PELESPKQNSHSNMAYHLPYSCKKEIDLQYQIP----HEQFLQLPLLESPKLLQTAATTV 236

Query: 204 SCNSVVPYAYD---RATLQSSTLTQEDQHSTQQGHQAQDLNSSLYSNNNNDQAVDQVTDW 260
           SCNS+V Y  D     TLQS +LTQ D+H  QQ H+ Q+L+  +Y  NNN+ AVDQVTDW
Sbjct: 237 SCNSMVAYGIDINHGTTLQSPSLTQ-DEHIRQQAHE-QNLH-PIYVYNNNELAVDQVTDW 293

Query: 261 RVLDKFVASQLSHEDAFKENNYSNAAADHFHVDEQMNMQGNGSNTRVEIAQEYASTSTSS 320
           RVL KFVASQLSHED  KENNYS+ AA  FH  E  N+     N + E   E ASTSTSS
Sbjct: 294 RVLHKFVASQLSHEDVSKENNYSSNAATLFHAAEHPNLLVQHLN-KEEAVPENASTSTSS 352

Query: 321 CQIDLWK 327
           CQI+LWK
Sbjct: 353 CQIELWK 359

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540408|ref|XP_003538681.1| PREDICTED: LOW QUALITY PROTEIN: NAC domain-containing protein 7-like [Glycine max]

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/377 (62%), Positives = 264/377 (70%), Gaps = 71/377 (18%)

Query: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
           MN+FSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLD+IKDVDLYKIEPWDLQELCKIGS
Sbjct: 1   MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDIIKDVDLYKIEPWDLQELCKIGS 60

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYS--RHSLIGMRKTLVFYKG 118
           +E+NEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAI+S  RH LIGMRKTLVFYKG
Sbjct: 61  DEENEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIHSSPRHFLIGMRKTLVFYKG 120

Query: 119 RAPNGQKSDWIMHEYRLETNENGTPQ----------------VKNQAQ------------ 150
           RAPNGQKSDWIMHEYRLETN+NGT Q                V+   +            
Sbjct: 121 RAPNGQKSDWIMHEYRLETNQNGTTQEEGWVVCRVFKKRMTTVRKMGEYESPCWYDDPAV 180

Query: 151 ----------PIIKPFTQYHHLHYPCKQELELQYNMSHIHHHDAFLQLPQLESPKVPQST 200
                      I  P+  YH  HYP K+ELELQ+N+     HDAFLQLPQLESPKVPQS+
Sbjct: 181 SFMQELESPSRISNPYASYHQ-HYPFKKELELQFNIP----HDAFLQLPQLESPKVPQSS 235

Query: 201 AGVSCNSVVPYAY----DRATLQSSTLTQED---QHSTQQGHQAQDLNSSLYSNNNNDQA 253
             ++C+ V+PY Y    +   LQS +LTQE+   QH  QQ  Q        +   +NDQA
Sbjct: 236 TSLNCSQVIPYGYGSNNNGNALQSLSLTQEEHIKQHCQQQSLQ--------FPYGSNDQA 287

Query: 254 VDQVTDWRVLDKFVASQLSHEDAF-KENNYSNAAADHFHVDEQMNMQGNGSNTRVEIAQE 312
           VD  TDWRVLDKFVASQLSH+  F KE +YS  A       EQ+ +  NG  T+ EI QE
Sbjct: 288 VDPATDWRVLDKFVASQLSHDQHFSKETSYSKVA-------EQIKLLANGC-TKTEIGQE 339

Query: 313 YAST--STSSCQIDLWK 327
            AST  STSSCQIDLWK
Sbjct: 340 MASTHPSTSSCQIDLWK 356

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563294|ref|XP_003549899.1| PREDICTED: NAC domain-containing protein 7-like [Glycine max]

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/385 (62%), Positives = 268/385 (69%), Gaps = 77/385 (20%)

Query: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
           MN+FSHVPPGFRFHPTDEELV YYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIG+
Sbjct: 5   MNTFSHVPPGFRFHPTDEELVGYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGT 64

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
           +EQ++WYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYS+H LIGMRKTLVFYKGRA
Sbjct: 65  DEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKHCLIGMRKTLVFYKGRA 124

Query: 121 PNGQKSDWIMHEYRLETNENGTPQ------------------------------------ 144
           PNGQKSDWIMHEYRLETNENGT                                      
Sbjct: 125 PNGQKSDWIMHEYRLETNENGTTSQEEGWVVCRVFKKRMTTMQKVGEYDQSPCWYDEQVS 184

Query: 145 ----VKNQAQPIIKPFTQYHHLHYP-CKQEL-ELQYNMSHIHHHDAFLQLPQLESPKVPQ 198
               +++  + I  P+  YHH H+P CK EL ELQYN      HDAFLQLPQLESPKV Q
Sbjct: 185 FMQDLESPRRSISLPYASYHHHHHPSCKPELMELQYNNI---PHDAFLQLPQLESPKVTQ 241

Query: 199 STAGVSCNSVVPYAYDR----------ATLQSSTLTQEDQ---HSTQQGHQAQDLNSSLY 245
           S       SVVPY Y+           +TLQ S+LTQE+Q    + QQ H       SLY
Sbjct: 242 SAC-----SVVPYGYENNNNNNNNNNGSTLQFSSLTQEEQLQYCNNQQSHH------SLY 290

Query: 246 SNNNNDQAVDQVTDWRVLDKFVASQLSHED---AFKENNYSNAAADHFHVDEQMNMQGNG 302
              +ND AVDQVTDWRVLDK+VASQLSH +     KE +YSNA    F+V EQ+++  NG
Sbjct: 291 --GSNDHAVDQVTDWRVLDKYVASQLSHNNQDVVSKETSYSNAPI--FNVTEQVSVVANG 346

Query: 303 SNTRVEIAQEYASTSTSSCQIDLWK 327
           S  + +++QEYASTSTSS QIDLWK
Sbjct: 347 SK-KEQVSQEYASTSTSSYQIDLWK 370

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
TAIR|locus:2202028	395	NAC007 "NAC 007" [Arabidopsis	0.440	0.364	0.937	4.6e-103
TAIR|locus:2026232	394	ANAC026 "Arabidopsis NAC domai	0.440	0.365	0.937	3e-95
TAIR|locus:2122219	377	NAC076 "NAC domain containing	0.422	0.366	0.847	6.6e-77
TAIR|locus:2060979	365	VND1 "vascular related NAC-dom	0.437	0.391	0.833	8.5e-77
TAIR|locus:2155046	292	NAC105 "NAC domain containing	0.422	0.472	0.798	4.2e-72
TAIR|locus:2044360	365	NST1 "NAC SECONDARY WALL THICK	0.422	0.378	0.797	1.1e-67
TAIR|locus:2167923	348	NAC101 "NAC-domain protein 101	0.691	0.649	0.557	3.2e-65
TAIR|locus:2035604	358	NAC012 "NAC domain containing	0.443	0.405	0.741	1e-63
TAIR|locus:2079562	334	NAC066 "NAC domain protein 66"	0.415	0.407	0.757	2.3e-62
TAIR|locus:2122804	341	NAC070 "NAC domain containing	0.556	0.533	0.591	4.2e-59

TAIR|locus:2202028 NAC007 "NAC 007" [Arabidopsis thaliana (taxid:3702)]

 Score = 753 (270.1 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
 Identities = 135/144 (93%), Positives = 141/144 (97%)

Query:     1 MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
             MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRI++D IKD+DLYKIEPWDLQELCKIG 
Sbjct:     1 MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGH 60

Query:    61 EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
             EEQ++WYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIY RHSLIGMRKTLVFYKGRA
Sbjct:    61 EEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRA 120

Query:   121 PNGQKSDWIMHEYRLETNENGTPQ 144
             PNGQKSDWIMHEYRLET+ENGTPQ
Sbjct:   121 PNGQKSDWIMHEYRLETDENGTPQ 144

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0042546 "cell wall biogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2026232 ANAC026 "Arabidopsis NAC domain containing protein 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 742 (266.3 bits), Expect = 3.0e-95, Sum P(2) = 3.0e-95
 Identities = 135/144 (93%), Positives = 141/144 (97%)

Query:     1 MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
             MNSFS VPPGFRFHPTDEELVDYYLRKKVASKRI++D+IKDVDLYKIEP DLQELCKIG+
Sbjct:     1 MNSFSQVPPGFRFHPTDEELVDYYLRKKVASKRIEIDIIKDVDLYKIEPCDLQELCKIGN 60

Query:    61 EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
             EEQ+EWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIY RHSLIGMRKTLVFYKGRA
Sbjct:    61 EEQSEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYIRHSLIGMRKTLVFYKGRA 120

Query:   121 PNGQKSDWIMHEYRLETNENGTPQ 144
             PNGQKSDWIMHEYRLET+ENGTPQ
Sbjct:   121 PNGQKSDWIMHEYRLETSENGTPQ 144

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2122219 NAC076 "NAC domain containing protein 76" [Arabidopsis thaliana (taxid:3702)]

 Score = 665 (239.2 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
 Identities = 117/138 (84%), Positives = 129/138 (93%)

Query:     7 VPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEW 66
             VPPGFRFHPTDEELV YYLRKKVAS++IDLDVI+D+DLY+IEPWDLQE C+IG EE+NEW
Sbjct:    10 VPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQESCRIGYEERNEW 69

Query:    67 YFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKS 126
             YFFSHKDKKYPTGTRTNRAT AGFWKATGRDKA+Y +  LIGMRKTLVFYKGRAPNGQK+
Sbjct:    70 YFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKSKLIGMRKTLVFYKGRAPNGQKT 129

Query:   127 DWIMHEYRLETNENGTPQ 144
             DWIMHEYRLE++EN  PQ
Sbjct:   130 DWIMHEYRLESDENAPPQ 147

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

TAIR|locus:2060979 VND1 "vascular related NAC-domain protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 668 (240.2 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
 Identities = 120/144 (83%), Positives = 132/144 (91%)

Query:     1 MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
             M S S VPPGFRFHPTDEELV YYLRKK+AS++IDLDVI+D+DLY+IEPWDLQE C+IG 
Sbjct:     4 MESCS-VPPGFRFHPTDEELVGYYLRKKIASQKIDLDVIRDIDLYRIEPWDLQEQCRIGY 62

Query:    61 EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
             EEQNEWYFFSHKDKKYPTGTRTNRAT AGFWKATGRDKA+Y +  LIGMRKTLVFYKGRA
Sbjct:    63 EEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRA 122

Query:   121 PNGQKSDWIMHEYRLETNENGTPQ 144
             PNG+KSDWIMHEYRLE++EN  PQ
Sbjct:   123 PNGKKSDWIMHEYRLESDENAPPQ 146

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010200 "response to chitin" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

TAIR|locus:2155046 NAC105 "NAC domain containing protein 105" [Arabidopsis thaliana (taxid:3702)]

 Score = 630 (226.8 bits), Expect = 4.2e-72, Sum P(3) = 4.2e-72
 Identities = 111/139 (79%), Positives = 126/139 (90%)

Query:     7 VPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEW 66
             +PPGFRFHPTDEELV YYL+KK+AS+RIDLDVI+++DLYKIEPWDLQE C+IG EEQ EW
Sbjct:    12 IPPGFRFHPTDEELVGYYLKKKIASQRIDLDVIREIDLYKIEPWDLQERCRIGYEEQTEW 71

Query:    67 YFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKS 126
             YFFSH+DKKYPTGTRTNRAT AGFWKATGRDKA+Y    LIGMRKTLVFY+GRAPNGQKS
Sbjct:    72 YFFSHRDKKYPTGTRTNRATVAGFWKATGRDKAVYLNSKLIGMRKTLVFYRGRAPNGQKS 131

Query:   127 DWIMHEY-RLETNENGTPQ 144
             DWI+HEY  LE+++N  PQ
Sbjct:   132 DWIIHEYYSLESHQNSPPQ 150

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

TAIR|locus:2044360 NST1 "NAC SECONDARY WALL THICKENING PROMOTING FACTOR1" [Arabidopsis thaliana (taxid:3702)]

 Score = 611 (220.1 bits), Expect = 1.1e-67, Sum P(3) = 1.1e-67
 Identities = 110/138 (79%), Positives = 121/138 (87%)

Query:     1 MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
             +N  S VPPGFRFHPT+EEL+ YYLRKKV S  IDLDVI+DVDL K+EPWD+QE+CKIG+
Sbjct:    10 VNGQSQVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDIQEMCKIGT 69

Query:    61 EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
               QN+WYFFSHKDKKYPTGTRTNRAT AGFWKATGRDK IYS    IGMRKTLVFYKGRA
Sbjct:    70 TPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRKTLVFYKGRA 129

Query:   121 PNGQKSDWIMHEYRLETN 138
             P+GQKSDWIMHEYRL+ N
Sbjct:   130 PHGQKSDWIMHEYRLDDN 147

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IGI;IMP

GO:0009901 "anther dehiscence" evidence=IGI

GO:0009809 "lignin biosynthetic process" evidence=IGI

GO:0010047 "fruit dehiscence" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2167923 NAC101 "NAC-domain protein 101" [Arabidopsis thaliana (taxid:3702)]

 Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
 Identities = 135/242 (55%), Positives = 168/242 (69%)

Query:     1 MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
             M S +H+PPG+RFHPTDEELVDYYL+ KVA   + +DVIKDVDLYKIEPWD+QELC  G+
Sbjct:     1 MESLAHIPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLYKIEPWDIQELCGRGT 60

Query:    61 EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
              E+ EWYFFSHKDKKYPTGTRTNRAT +GFWKATGRDKAIYS+  L+GMRKTLVFYKGRA
Sbjct:    61 GEEREWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAIYSKQELVGMRKTLVFYKGRA 120

Query:   121 PNGQKSDWIMHEYRLETNENGTPQVKNQA--QPIIKPFT--QYHH----LHYPCKQELEL 172
             PNGQKSDWIMHEYRLET+ENG P  +     +   K  T   Y++    +     QE   
Sbjct:   121 PNGQKSDWIMHEYRLETDENGPPHEEGWVVCRAFKKKLTTMNYNNPRTMMGSSSGQESNW 180

Query:   173 QYNMSHIHHHDAFLQLPQLESPKVPQSTAGVSCNSVV-----PYAYDRATLQSS--TLTQ 225
                   + + + +  LP LESP++ Q ++  S +S+      PY    +T+ ++  T+ Q
Sbjct:   181 FTQQMDVGNGN-YYHLPDLESPRMFQGSSSSSLSSLHQNDQDPYGVVLSTINATPTTIMQ 239

Query:   226 ED 227
              D
Sbjct:   240 RD 241

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009735 "response to cytokinin stimulus" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=IEP;RCA

GO:0010089 "xylem development" evidence=RCA;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007155 "cell adhesion" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2035604 NAC012 "NAC domain containing protein 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 585 (211.0 bits), Expect = 1.0e-63, Sum P(3) = 1.0e-63
 Identities = 109/147 (74%), Positives = 123/147 (83%)

Query:     1 MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
             +N  S VPPGFRFHPT+EEL+ YYLRKKV S++IDLDVI++VDL K+EPWD+QE C+IGS
Sbjct:    10 INGQSKVPPGFRFHPTEEELLHYYLRKKVNSQKIDLDVIREVDLNKLEPWDIQEECRIGS 69

Query:    61 EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
               QN+WYFFSHKDKKYPTGTRTNRAT AGFWKATGRDK I S    IG+RKTLVFYKGRA
Sbjct:    70 TPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSCVRRIGLRKTLVFYKGRA 129

Query:   121 PNGQKSDWIMHEYRLETN--ENGTPQV 145
             P+GQKSDWIMHEYRL+     NG   V
Sbjct:   130 PHGQKSDWIMHEYRLDDTPMSNGYADV 156

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IGI;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0009809 "lignin biosynthetic process" evidence=IGI

GO:0010047 "fruit dehiscence" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2079562 NAC066 "NAC domain protein 66" [Arabidopsis thaliana (taxid:3702)]

 Score = 594 (214.2 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
 Identities = 103/136 (75%), Positives = 120/136 (88%)

Query:     1 MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
             +N  S VPPGFRFHPT+EEL+ YYLRKK+++ +IDLDVI D+DL K+EPWD+QE+CKIG+
Sbjct:     5 VNGQSQVPPGFRFHPTEEELLKYYLRKKISNIKIDLDVIPDIDLNKLEPWDIQEMCKIGT 64

Query:    61 EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
               QN+WYF+SHKDKKYPTGTRTNRAT  GFWKATGRDK IY+    IGMRKTLVFYKGRA
Sbjct:    65 TPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDRIGMRKTLVFYKGRA 124

Query:   121 PNGQKSDWIMHEYRLE 136
             P+GQKSDWIMHEYRL+
Sbjct:   125 PHGQKSDWIMHEYRLD 140

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0009901 "anther dehiscence" evidence=IGI

GO:0016020 "membrane" evidence=IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2122804 NAC070 "NAC domain containing protein 70" [Arabidopsis thaliana (taxid:3702)]

 Score = 580 (209.2 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
 Identities = 110/186 (59%), Positives = 137/186 (73%)

Query:     1 MNSFSH--VPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKI 58
             M S S+  VPPGFRFHPTDEEL+ YYL+KK++ ++ +++VI++VDL K+EPWDLQE CKI
Sbjct:     1 MGSSSNGGVPPGFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDLNKLEPWDLQERCKI 60

Query:    59 GSEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKG 118
             GS  QNEWYFFSHKD+KYPTG+RTNRAT AGFWKATGRDK I + +  IGMRKTLVFYKG
Sbjct:    61 GSTPQNEWYFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCIRNSYKKIGMRKTLVFYKG 120

Query:   119 RAPNGQKSDWIMHEYRLETNENGTPQVKNQAQPIIKPFTQYHHLHYPCKQELELQYNMSH 178
             RAP+GQK+DWIMHEYRLE  ++           + + F +  +L +    E     N   
Sbjct:   121 RAPHGQKTDWIMHEYRLEDADDPQANPSEDGWVVCRVFMK-KNL-FKVVNEGSSSINSLD 178

Query:   179 IHHHDA 184
              H+HDA
Sbjct:   179 QHNHDA 184

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=IEP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	327
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	6e-82

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  244 bits (624), Expect = 6e-82
 Identities = 84/131 (64%), Positives = 105/131 (80%), Gaps = 4/131 (3%)

Query: 8   PPGFRFHPTDEELVDYYLRKKVASKRIDL-DVIKDVDLYKIEPWDLQELCKIGSEEQNEW 66
           PPGFRFHPTDEELV YYL++KV  K + L DVI +VD+YK EPWDL +  K    +  EW
Sbjct: 2   PPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPD-GKAKGGD-REW 59

Query: 67  YFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHS-LIGMRKTLVFYKGRAPNGQK 125
           YFFS +D+KYP G+RTNRAT +G+WKATG+DK + S+   ++GM+KTLVFYKGRAP G+K
Sbjct: 60  YFFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPKGEK 119

Query: 126 SDWIMHEYRLE 136
           +DW+MHEYRLE
Sbjct: 120 TDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	327
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=4e-43  Score=296.37  Aligned_cols=127  Identities=54%  Similarity=1.101  Sum_probs=96.5

Q ss_pred             CCCCcEECCChHHHHHHHHHHHhccCCCCC-CceeeccCCCCCCcchhhhhhcCCCCCceEEEEecCCCCCCCCCccccc
Q 020354            7 VPPGFRFHPTDEELVDYYLRKKVASKRIDL-DVIKDVDLYKIEPWDLQELCKIGSEEQNEWYFFSHKDKKYPTGTRTNRA   85 (327)
Q Consensus         7 LPpGfRF~PTDEELI~~YLr~Kv~g~pl~~-~~I~dvDVY~~ePwdLp~~~~~g~~~~~~WYFFs~~~kk~~~G~R~nRa   85 (327)
                      |||||||+|||+|||.+||++|+.|.+++. ++|+++|||++|||+|+....   ..+.+||||+++++++++|.|++|+
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~~---~~~~~~yFF~~~~~~~~~~~r~~R~   77 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKFK---GGDEEWYFFSPRKKKYPNGGRPNRV   77 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHSS---S-SSEEEEEEE----------S-EE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhcc---CCCceEEEEEecccccCCccccccc
Confidence            899999999999999999999999999887 799999999999999995222   2345999999999999999999999


Q ss_pred             ccCceeeecCCCeeEec-CCeeEEeEEEEEEeeccCCCCCCcCeEEEEEEeC
Q 020354           86 TKAGFWKATGRDKAIYS-RHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE  136 (327)
Q Consensus        86 tggG~WK~tG~~k~I~~-~g~lIG~KKtLvFy~gr~p~g~KT~WvMhEY~L~  136 (327)
                      +++|+||++|+.++|.. ++.+||+|++|+||.++.+++.||+|+||||+|+
T Consensus        78 ~~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   78 TGGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             ETTEEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             ccceEEeecccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            99999999999999998 8999999999999998888899999999999985

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	327
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		7e-42
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		3e-37
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		3e-37

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  167 bits (423), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 73/130 (56%), Positives = 97/130 (74%), Gaps = 3/130 (2%)
Query: 6   HVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNE 65
           ++PPGFRFHPTD+ELV++YL +K A +R+ + +I +VDLYK +PWDL E    G+ E   
Sbjct: 14  NLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGARE--- 70
Query: 66  WYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQK 125
           WYFF+ +D+KYP G+R NRA   G+WKATG DK +  R   +G++K LVFY G+AP G K
Sbjct: 71  WYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVK 130
Query: 126 SDWIMHEYRL 135
           +DWIMHEYRL
Sbjct: 131 TDWIMHEYRL 140

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  152 bits (384), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 70/141 (49%), Positives = 95/141 (67%), Gaps = 5/141 (3%)
Query: 7   VPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEW 66
           +PPGFRF+PTDEEL+  YL +K A     L +I ++DLYK +PW L      G   + EW
Sbjct: 20  LPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG---EKEW 76
Query: 67  YFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKS 126
           YFFS +D+KYP G+R NR   +G+WKATG DK I +    +G++K LVFY G+AP G K+
Sbjct: 77  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKT 136
Query: 127 DWIMHEYRL--ETNENGTPQV 145
           +WIMHEYRL   +  NG+ ++
Sbjct: 137 NWIMHEYRLIEPSRRNGSTKL 157

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  152 bits (383), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 70/141 (49%), Positives = 95/141 (67%), Gaps = 5/141 (3%)
Query: 7   VPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEW 66
           +PPGFRF+PTDEEL+  YL +K A     L +I ++DLYK +PW L      G   + EW
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG---EKEW 73
Query: 67  YFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKS 126
           YFFS +D+KYP G+R NR   +G+WKATG DK I +    +G++K LVFY G+AP G K+
Sbjct: 74  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKT 133
Query: 127 DWIMHEYRL--ETNENGTPQV 145
           +WIMHEYRL   +  NG+ ++
Sbjct: 134 NWIMHEYRLIEPSRRNGSTKL 154
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	327
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	1e-94
1ut7_A	171	No apical meristem protein; transcription regulati	6e-93

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  277 bits (710), Expect = 1e-94
 Identities = 74/151 (49%), Positives = 100/151 (66%), Gaps = 3/151 (1%)

Query: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGS 60
             +  ++PPGFRFHPTD+ELV++YL +K A +R+ + +I +VDLYK +PWDL E    G+
Sbjct: 9   AEAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGA 68

Query: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRA 120
               EWYFF+ +D+KYP G+R NRA   G+WKATG DK +  R   +G++K LVFY G+A
Sbjct: 69  ---REWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKA 125

Query: 121 PNGQKSDWIMHEYRLETNENGTPQVKNQAQP 151
           P G K+DWIMHEYRL          K  +  
Sbjct: 126 PRGVKTDWIMHEYRLADAGRAAAGAKKGSLR 156

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  273 bits (699), Expect = 6e-93
 Identities = 68/137 (49%), Positives = 88/137 (64%), Gaps = 3/137 (2%)

Query: 7   VPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEW 66
           +PPGFRF+PTDEEL+  YL +K A     L +I ++DLYK +PW L      G     EW
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGE---KEW 73

Query: 67  YFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKS 126
           YFFS +D+KYP G+R NR   +G+WKATG DK I +    +G++K LVFY G+AP G K+
Sbjct: 74  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKT 133

Query: 127 DWIMHEYRLETNENGTP 143
           +WIMHEYRL        
Sbjct: 134 NWIMHEYRLIEPSRRNG 150

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	327
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=2.8e-50  Score=358.35  Aligned_cols=135  Identities=54%  Similarity=1.089  Sum_probs=122.5

Q ss_pred             CCCCCCCCCcEECCChHHHHHHHHHHHhccCCCCCCceeeccCCCCCCcchhhhhhcCCCCCceEEEEecCCCCCCCCCc
Q 020354            2 NSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEWYFFSHKDKKYPTGTR   81 (327)
Q Consensus         2 ~~~~~LPpGfRF~PTDEELI~~YLr~Kv~g~pl~~~~I~dvDVY~~ePwdLp~~~~~g~~~~~~WYFFs~~~kk~~~G~R   81 (327)
                      .....|||||||+|||||||.|||++|+.|.+++.++|+++|||++|||+||+.+..|   +++||||+++++||++|.|
T Consensus        10 ~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~g---~~ewYFFs~r~~ky~~g~R   86 (174)
T 3ulx_A           10 EAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFG---AREWYFFTPRDRKYPNGSR   86 (174)
T ss_dssp             CSTTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSSC---SSEEEEEEECCC-----CC
T ss_pred             ccccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhccC---CceEEEEeccccccCCCCC
Confidence            4567899999999999999999999999999999999999999999999999976544   3699999999999999999


Q ss_pred             ccccccCceeeecCCCeeEecCCeeEEeEEEEEEeeccCCCCCCcCeEEEEEEeCCCC
Q 020354           82 TNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNE  139 (327)
Q Consensus        82 ~nRatggG~WK~tG~~k~I~~~g~lIG~KKtLvFy~gr~p~g~KT~WvMhEY~L~~~~  139 (327)
                      ++|++++||||++|++++|..+|.+||+||+|+||.|++|++.||+|+||||+|....
T Consensus        87 ~nR~t~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~  144 (174)
T 3ulx_A           87 PNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAG  144 (174)
T ss_dssp             SCEEETTEEEEECSCCEEECCSSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC
T ss_pred             ceeecCCceEccCCCCcEEeeCCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCC
Confidence            9999999999999999999999999999999999999999999999999999999864

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=7.8e-50  Score=354.54  Aligned_cols=152  Identities=45%  Similarity=0.862  Sum_probs=126.6

Q ss_pred             CCCCCCCCCcEECCChHHHHHHHHHHHhccCCCCCCceeeccCCCCCCcchhhhhhcCCCCCceEEEEecCCCCCCCCCc
Q 020354            2 NSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEWYFFSHKDKKYPTGTR   81 (327)
Q Consensus         2 ~~~~~LPpGfRF~PTDEELI~~YLr~Kv~g~pl~~~~I~dvDVY~~ePwdLp~~~~~g~~~~~~WYFFs~~~kk~~~G~R   81 (327)
                      .....|||||||+|||||||.|||++|+.|.+++.++|+++|||++|||+||+.+..|   +++||||+++++||++|.|
T Consensus        12 ~~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~~g---~~ewyFFs~r~~k~~~g~R   88 (171)
T 1ut7_A           12 LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG---EKEWYFFSPRDRKYPNGSR   88 (171)
T ss_dssp             CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSC---SSEEEEEEECCC-------
T ss_pred             ccccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhhcC---CccEEEEeccccccCCCCc
Confidence            3467899999999999999999999999999999999999999999999999986543   4699999999999999999


Q ss_pred             ccccccCceeeecCCCeeEecCCeeEEeEEEEEEeeccCCCCCCcCeEEEEEEeCCCCCCC--CcCCCCCCcccCCCccc
Q 020354           82 TNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGT--PQVKNQAQPIIKPFTQY  159 (327)
Q Consensus        82 ~nRatggG~WK~tG~~k~I~~~g~lIG~KKtLvFy~gr~p~g~KT~WvMhEY~L~~~~~~~--~~~e~w~~~~~~~~~~~  159 (327)
                      ++|+|++|+||++|++++|..++.+||+||+|+||+|++|++.||+|+||||+|.......  ...+    ..|+.+++.
T Consensus        89 ~~R~t~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~~~~~~~~----~~VlCrv~~  164 (171)
T 1ut7_A           89 PNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLD----DWVLCRIYK  164 (171)
T ss_dssp             CCEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------C----CEEEEEEEE
T ss_pred             ccccCCCCEEeccCCCceEEecCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccccCcccCC----CEEEEEEEE
Confidence            9999999999999999999999999999999999999999999999999999999865221  1222    246666665


Q ss_pred             c
Q 020354          160 H  160 (327)
Q Consensus       160 ~  160 (327)
                      +
T Consensus       165 k  165 (171)
T 1ut7_A          165 K  165 (171)
T ss_dssp             C
T ss_pred             c
Confidence            5

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	327
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	4e-61

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  190 bits (484), Expect = 4e-61
 Identities = 68/132 (51%), Positives = 88/132 (66%), Gaps = 3/132 (2%)

Query: 8   PPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEWY 67
           PPGFRF+PTDEEL+  YL +K A     L +I ++DLYK +PW L      G   + EWY
Sbjct: 18  PPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFG---EKEWY 74

Query: 68  FFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKSD 127
           FFS +D+KYP G+R NR   +G+WKATG DK I +    +G++K LVFY G+AP G K++
Sbjct: 75  FFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTN 134

Query: 128 WIMHEYRLETNE 139
           WIMHEYRL    
Sbjct: 135 WIMHEYRLIEPS 146

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	327
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.8e-46  Score=328.04  Aligned_cols=133  Identities=50%  Similarity=0.990  Sum_probs=118.0

Q ss_pred             CCCCCCCcEECCChHHHHHHHHHHHhccCCCCCCceeeccCCCCCCcchhhhhhcCCCCCceEEEEecCCCCCCCCCccc
Q 020354            4 FSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNEWYFFSHKDKKYPTGTRTN   83 (327)
Q Consensus         4 ~~~LPpGfRF~PTDEELI~~YLr~Kv~g~pl~~~~I~dvDVY~~ePwdLp~~~~~g~~~~~~WYFFs~~~kk~~~G~R~n   83 (327)
                      ...|||||||+|||||||.+||++|+.|.+++.++|+++|||++|||+||+....   .+++||||+++.+++++|.|.+
T Consensus        14 ~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~~---~~~~wyFft~~~~k~~~g~r~~   90 (166)
T d1ut7a_          14 QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALF---GEKEWYFFSPRDRKYPNGSRPN   90 (166)
T ss_dssp             SSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSS---CSSEEEEEEECCC-------CC
T ss_pred             cccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhcc---CcceEEEEeeeccccCCCCccc
Confidence            4689999999999999999999999999999999999999999999999986543   3468999999999999999999


Q ss_pred             ccccCceeeecCCCeeEecCCeeEEeEEEEEEeeccCCCCCCcCeEEEEEEeCCCC
Q 020354           84 RATKAGFWKATGRDKAIYSRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNE  139 (327)
Q Consensus        84 RatggG~WK~tG~~k~I~~~g~lIG~KKtLvFy~gr~p~g~KT~WvMhEY~L~~~~  139 (327)
                      |++++|+||++|++++|.++|.+||+||+|+||.++++++.+|+|+||||+|.+..
T Consensus        91 R~~g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~  146 (166)
T d1ut7a_          91 RVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPS  146 (166)
T ss_dssp             EEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC
T ss_pred             cccCCCEecccCCCceEecCCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcc
Confidence            99999999999999999999999999999999999999999999999999998754