Citrus Sinensis ID: 020383

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------
Protein Sequence
MTSGTRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSSFPSPRSSHYTPHANGSADANSLIPWLKNLSSSSSSASSKDPHHMYIHGGSISAPVTPPLSSPTCRTPRTKNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFSLVSRNPFGFREEVLSGGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCIATEFAFGCNATGLVKPWEGERIHEECVSDDLELTLGNSKTR
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccHHHHEEccccccccccEcccccccccccHHHccccccccccccccccccccccccccccccccHHHcccHHcEEccccccEEccccccEEEEcccccccEEEccccccc
Coil and Loop (DISEMBL)
mtsgtrmptwkerdnNKRRERRRRAIAAKIYAGLRmygnyrlpkhcdnnEVLKALCNEAgwtveedgttyrkgckpveymdvmggsasasacssyqqspcasynpspgsssfpsprsshytphangsadanslipwlknlssssssasskdphhmyihggsisapvtpplssptcrtprtkndwdeptAVAAWagqhypflpsstppspgrqvlpdsgwlsgiqipqsgpssptfslvsrnpfgfreevlsggpsrmwtpgqsgtcspavpagvdntsdvpmsdcIATEFAfgcnatglvkpwegeriheecvsddleltlgnsktr
Flexible Loop (DISEMBL)
mtsgtrmptwkerdnnkrrerRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAgwtveedgttyrkGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSSFPSPRSSHYTPHANGSADANSLIPWLKNLSSSSSSASSKDPHHMYIHGGsisapvtpplsSPTCRTPRTKNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFSLVSRNPFGFREEVLSGGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCIATEFAFGCNATGLVKPWEGERIHeecvsddleltlgnsktr
Low Complexity Region (SEG)
MTSGTRMPTWkerdnnkrrerrrrAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVMGGsasasacssyqqspcasynpspgsssfpsprssHYTPHANGSADANSLIPWLKNLssssssassKDPHHMYIHGGSISAPVTPPLSSPTCRTPRTKNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFSLVSRNPFGFREEVLSGGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCIATEFAFGCNATGLVKPWEGERIHEECVSDDLELTLGNSKTR
Disordered region (IsUnstruct)
************************AIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVM********************************************************************************************************TAVAAWAGQHYPF*******************************************************************************VPMSDCIATEFAFGCNATGLVKPWEGERIHEECVSDD***********
Disordered Region (DISOPRED)
*************************IAAKIYAGLRMYGNYRLPKHCDNNEVLKALCN********************************************************************************************************************************************************************************************************************************************CNATGLVKPWEGERIHEECVSDDLELTLGN****
Disordered Region (DISEMBL)
********************RRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVMGG*****************************************SADANSLIPWLKN************PHHMYIHGGSISAPVTPPLSSPTCRTPRTKNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFSLVSRNPFGFREEVLSGGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCIATEFAFGCNATGLVKPWEGERIHEECVSDDLELTLGNSKTR
Disordered Region (DISPRO)
********TWK********ERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVM**********************************************ANSLIPWLKNLS**********PHHM****GSISAPVT**************N*********AW**********STPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFSLVSRNPFGFREEVL****************SP*VPA**DNTSDVPMSDCIATEFAFGCNATGLVKPWEGERIHEECVSDDLELTLG*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTSGTRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSSFPSPRSSHYTPHANGSADANSLIPWLKNLSSSSSSASSKDPHHMYIHGGSISAPVTPPLSSPTCRTPRTKNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFSLVSRNPFGFREEVLSGGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCIATEFAFGCNATGLVKPWEGERIHEECVSDDLELTLGNSKTR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	327	2.2.26 [Sep-21-2011]
Q9ZV88	325	BES1/BZR1 homolog protein	yes	no	0.966	0.972	0.705	1e-109
O49404	284	BES1/BZR1 homolog protein	no	no	0.853	0.982	0.641	1e-91
Q9LN63	335	Protein BRASSINAZOLE-RESI	no	no	0.822	0.802	0.403	5e-39
Q8S307	336	Protein BRASSINAZOLE-RESI	no	no	0.853	0.830	0.410	9e-39
Q94A43	318	BES1/BZR1 homolog protein	no	no	0.859	0.883	0.416	2e-35
Q9S7F3	276	BES1/BZR1 homolog protein	no	no	0.755	0.894	0.391	1e-31
Q9FH80	689	Beta-amylase 8 OS=Arabido	no	no	0.183	0.087	0.583	8e-14
O80831	691	Beta-amylase 7 OS=Arabido	no	no	0.308	0.146	0.442	8e-12

>sp|Q9ZV88|BEH4_ARATH BES1/BZR1 homolog protein 4 OS=Arabidopsis thaliana GN=BEH4 PE=1 SV=1

 Score =  393 bits (1010), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 237/336 (70%), Positives = 266/336 (79%), Gaps = 20/336 (5%)

Query: 1   MTSGTRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAG 60
           MTSGTRMPTW+ER+NNKRRERRRRAIAAKI+ GLRMYGNY LPKHCDNNEVLKALCNEAG
Sbjct: 1   MTSGTRMPTWRERENNKRRERRRRAIAAKIFTGLRMYGNYELPKHCDNNEVLKALCNEAG 60

Query: 61  WTVEEDGTTYRKGC-KPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSSFPSPRSSH 119
           W VE DGTTYRKGC +PVE M++ GGSA+AS CSSYQ SPCASYNPSPGSS+F SP SS 
Sbjct: 61  WIVEPDGTTYRKGCSRPVERMEIGGGSATASPCSSYQPSPCASYNPSPGSSNFMSPASSS 120

Query: 120 YTPHANGSADANSLIPWLKNL---SSSSSSASSKDPHHMYIHGGSISAPVTPPLSSPTCR 176
           +    +G  D  SLIPWLK+L   SSSS+S+SS+ P+++YI GGSISAPVTPPLSSPT R
Sbjct: 121 FANLTSG--DGQSLIPWLKHLSTTSSSSASSSSRLPNYLYIPGGSISAPVTPPLSSPTAR 178

Query: 177 TPRTKNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFS 236
           TPR   DW +          +  F  SSTPPSP RQ++PDS W SGIQ+ QS P+SPTFS
Sbjct: 179 TPRMNTDWQQ---------LNNSFFVSSTPPSPTRQIIPDSEWFSGIQLAQSVPASPTFS 229

Query: 237 LVSRNPFGFREE----VLSGGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCIA-TEFA 291
           LVS+NPFGF+EE       GG SRMWTPGQSGTCSPA+P G D T+DVPMS+ +A  EFA
Sbjct: 230 LVSQNPFGFKEEAASAAGGGGGSRMWTPGQSGTCSPAIPPGADQTADVPMSEAVAPPEFA 289

Query: 292 FGCNATGLVKPWEGERIHEECVSDDLELTLGNSKTR 327
           FG N  GLVK WEGERIHEE  SDDLELTLGNS TR
Sbjct: 290 FGSNTNGLVKAWEGERIHEESGSDDLELTLGNSSTR 325

Arabidopsis thaliana (taxid: 3702)

>sp|O49404|BEH3_ARATH BES1/BZR1 homolog protein 3 OS=Arabidopsis thaliana GN=BEH3 PE=1 SV=1

 Score =  336 bits (862), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 213/332 (64%), Positives = 237/332 (71%), Gaps = 53/332 (15%)

Query: 1   MTSGTRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAG 60
           MTSGTR PTWKER+NNKRRERRRRAIAAKI+AGLR++GN++LPKHCDNNEVLKALCNEAG
Sbjct: 1   MTSGTRTPTWKERENNKRRERRRRAIAAKIFAGLRIHGNFKLPKHCDNNEVLKALCNEAG 60

Query: 61  WTVEEDGTTYRKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSSFPSPRSSHY 120
           WTVE+DGTTYRKGCKP++ MD+M GS SAS CSSYQ SP ASYN        PSP SS +
Sbjct: 61  WTVEDDGTTYRKGCKPMDRMDLMNGSTSASPCSSYQHSPRASYN--------PSPSSSSF 112

Query: 121 TPHANGSADANSLIPWLKNLSSSSSSASSKDPHHMYIHGGSISAPVTPPLSSPTCRTPRT 180
               N   DANSLIPWLKNLSS+S    SK P   + HG SISAPVTPPL+         
Sbjct: 113 PSPTNPFGDANSLIPWLKNLSSNS---PSKLP---FFHGNSISAPVTPPLAR-------- 158

Query: 181 KNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFSLVSR 240
                                     P+  +  +PDSGWLSG+Q PQSGPSSPTFSLVSR
Sbjct: 159 -------------------------SPTRDQVTIPDSGWLSGMQTPQSGPSSPTFSLVSR 193

Query: 241 NPFGFREEVLSGGP--SRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCIATEFAFGCN--- 295
           NPF F +E    G   S MWTPGQSG CSPA+PAGVD  SDVPM+D +  EFAFGCN   
Sbjct: 194 NPF-FDKEAFKMGDCNSPMWTPGQSGNCSPAIPAGVDQNSDVPMADGMTAEFAFGCNAMA 252

Query: 296 ATGLVKPWEGERIHEECVSDDLELTLGNSKTR 327
           A G+VKPWEGERIH ECVSDDLELTLGNS+TR
Sbjct: 253 ANGMVKPWEGERIHGECVSDDLELTLGNSRTR 284

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LN63|BZR2_ARATH Protein BRASSINAZOLE-RESISTANT 2 OS=Arabidopsis thaliana GN=BZR2 PE=1 SV=1

 Score =  162 bits (409), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 146/362 (40%), Positives = 186/362 (51%), Gaps = 93/362 (25%)

Query: 6   RMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEE 65
           R P+W+ER+NN+RRERRRRA+AAKIY GLR  GNY LPKHCDNNEVLKALC+EAGW VEE
Sbjct: 22  RKPSWRERENNRRRERRRRAVAAKIYTGLRAQGNYNLPKHCDNNEVLKALCSEAGWVVEE 81

Query: 66  DGTTYRKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSSFPSPRSSHYTPHAN 125
           DGTTYRKG KP+   D+ G S+ A        +P +S+N SP SS+F SP  S+    ++
Sbjct: 82  DGTTYRKGHKPLP-GDMAGSSSRA--------TPYSSHNQSPLSSTFDSPILSYQVSPSS 132

Query: 126 GSA----------DANSLIPWLKNLSSSSSSASSKDPHHMYIHGGSISAPVTPPLSSPTC 175
            S           + +++ P+L+N        SS  P  +     S SAPVTPP+SSPT 
Sbjct: 133 SSFPSPSRVGDPHNISTIFPFLRN----GGIPSSLPPLRI-----SNSAPVTPPVSSPTS 183

Query: 176 RTPRTKNDWDEPT-------AVAAWAGQHYPFLPSSTPPSPGRQ-------VLP------ 215
           R P+    W+  T       A  +    +YPF   S P SP           +P      
Sbjct: 184 RNPKPLPTWESFTKQSMSMAAKQSMTSLNYPFYAVSAPASPTHHRQFHAPATIPECDESD 243

Query: 216 ----DSG-WLSGIQIPQSG-------PSSPTFSLVSRNPFGFREEVLSGGPSRMWTPGQS 263
               DSG W+S  +  Q         P+SPTF+LV   P     + LS   + +   GQS
Sbjct: 244 SSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPAP-----QQLSPNTAAIQEIGQS 298

Query: 264 GTCSPAVPAGVDNTSDVPMSDCIATEFAFGCNATGLVKPWEGERIHEECVSDDLELTLGN 323
                                   +EF F       VKPWEGERIH+  + +DLELTLGN
Sbjct: 299 ------------------------SEFKF---ENSQVKPWEGERIHDVAM-EDLELTLGN 330

Query: 324 SK 325
            K
Sbjct: 331 GK 332

Positive brassinosteroid-signaling protein. Transcription factor that activates target gene expression by binding specifically to the DNA sequence 5'-CANNTG-3'(E box) through its N-terminal domain. Can bind individually to the promoter as a homodimer or synergistically as a heterodimer with BIM1, BIM2 or BIM3. The C-terminal domain is probably involved in transcriptional activation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8S307|BZR1_ARATH Protein BRASSINAZOLE-RESISTANT 1 OS=Arabidopsis thaliana GN=BZR1 PE=1 SV=1

 Score =  160 bits (406), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 146/356 (41%), Positives = 187/356 (52%), Gaps = 77/356 (21%)

Query: 6   RMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEE 65
           R P+W+ER+NN+RRERRRRA+AAKIY GLR  G+Y LPKHCDNNEVLKALC EAGW VEE
Sbjct: 23  RKPSWRERENNRRRERRRRAVAAKIYTGLRAQGDYNLPKHCDNNEVLKALCVEAGWVVEE 82

Query: 66  DGTTYRKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSSFPSPRSSHYTPHAN 125
           DGTTYRKGCKP+   ++ G S+  +  SS  QSP +S   SP  S   SP SS +   + 
Sbjct: 83  DGTTYRKGCKPLP-GEIAGTSSRVTPYSSQNQSPLSSAFQSPIPSYQVSPSSSSFPSPSR 141

Query: 126 GSADAN---SLIPWLKNLSSSSSSASSKDPHHMYIHGGSISAPVTPPLSSPTCRTPRTKN 182
           G  + N   +  P+L+N    SS  S +          S S PVTPP+SSPT + P+   
Sbjct: 142 GEPNNNMSSTFFPFLRNGGIPSSLPSLRI---------SNSCPVTPPVSSPTSKNPKPLP 192

Query: 183 DWD----EPTAVA--AWAGQHYPFLPSSTPPSPGRQ-------VLP----------DSG- 218
           +W+    +  A+A  + A  +YPF   S P SP  +        +P          DSG 
Sbjct: 193 NWESIAKQSMAIAKQSMASFNYPFYAVSAPASPTHRHQFHTPATIPECDESDSSTVDSGH 252

Query: 219 WLSGIQIPQSG-------PSSPTFSLVSRNPFGFREEVLSGGPSRMWTPGQSGTCSPAVP 271
           W+S  +  Q         P+SPTF+LV   P     + +S   +     GQS        
Sbjct: 253 WISFQKFAQQQPFSASMVPTSPTFNLVKPAP-----QQMSPNTAAFQEIGQS-------- 299

Query: 272 AGVDNTSDVPMSDCIATEFAFGCNATGLVKPWEGERIHEECVSDDLELTLGNSKTR 327
                           +EF F       VKPWEGERIH+  + +DLELTLGN K R
Sbjct: 300 ----------------SEFKF---ENSQVKPWEGERIHDVGM-EDLELTLGNGKAR 335

Positive brassinosteroid-signaling protein. Mediates downstream growth responses and negative feedback regulation of brassinosteroid biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q94A43|BEH2_ARATH BES1/BZR1 homolog protein 2 OS=Arabidopsis thaliana GN=BEH2 PE=1 SV=1

 Score =  149 bits (377), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 143/343 (41%), Positives = 174/343 (50%), Gaps = 62/343 (18%)

Query: 6   RMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEE 65
           R PTWKER+NNK+RERRRRAI AKIY+GLR  GNY+LPKHCDNNEVLKALC EAGW VE+
Sbjct: 16  RTPTWKERENNKKRERRRRAITAKIYSGLRAQGNYKLPKHCDNNEVLKALCLEAGWIVED 75

Query: 66  DGTTYRKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSS--SFPSPRSSHYTPH 123
           DGTTYRKG KP    D+ G   + S  SS Q SP +S  PSP  S    P   S      
Sbjct: 76  DGTTYRKGFKP-PASDISGTPTNFSTNSSIQPSPQSSAFPSPAPSYHGSPVSSSFPSPSR 134

Query: 124 ANGSADANSLIPWLKNLSSSSSSASSKDPHHMYIHGGSISAPVTPPLSSPTCRTPRTKND 183
            +G+  +  L+P+L N++SS        P ++     S SAPVTPPLSSPT R  + K  
Sbjct: 135 YDGNPSSYLLLPFLHNIASSI-------PANLPPLRISNSAPVTPPLSSPTSRGSKRKLT 187

Query: 184 WDEPTAVAAWAGQHYPFLPSSTPPSPGRQV------------------LPDSG-WLSGIQ 224
            ++     +     +P    S P SP R+                   + DSG W   I 
Sbjct: 188 SEQLPNGGSLHVLRHPLFAISAPSSPTRRAGHQTPPTIPECDESEEDSIEDSGRW---IN 244

Query: 225 IPQSGPSSPTFSLVSRNPFGFREEVLSGGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSD 284
              + P+SPTF+LV +       +    G S M   G                       
Sbjct: 245 FQSTAPTSPTFNLVQQTSMAIDMKRSDWGMSGMNGRG----------------------- 281

Query: 285 CIATEFAFGCNATGLVKPWEGERIHEECVSDDLELTLGNSKTR 327
               EF F     G VKPWEGE IHE  V +DLELTLG +K R
Sbjct: 282 ---AEFEF---ENGTVKPWEGEMIHEVGV-EDLELTLGGTKAR 317

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S7F3|BEH1_ARATH BES1/BZR1 homolog protein 1 OS=Arabidopsis thaliana GN=BEH1 PE=1 SV=1

 Score =  137 bits (344), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 132/337 (39%), Positives = 166/337 (49%), Gaps = 90/337 (26%)

Query: 6   RMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEE 65
           RMPTWKER+NNK+RERRRRAIAAKI+ GLR  GNY+LPKHCDNNEVLKALC EAGW V E
Sbjct: 14  RMPTWKERENNKKRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVLKALCLEAGWIVHE 73

Query: 66  DGTTYRKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSSFPSP---------- 115
           DGTTYRKG +P E                    PC+S   SP SS+F SP          
Sbjct: 74  DGTTYRKGSRPTE-----------------TTVPCSSIQLSPQSSAFQSPIPSYQASPSS 116

Query: 116 ----RSSHYTPHANGSADANSLIPWLKNLSSSSSSASSKDPHHMYIHGGSISAPVTPPLS 171
                 + + P+ + +     LIP+L+NL+SS + A  +          S SAPVTPP+S
Sbjct: 117 SSYPSPTRFDPNQSSTY----LIPYLQNLASSGNLAPLRI---------SNSAPVTPPIS 163

Query: 172 SPTCRTPRTKNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPS 231
           SP    PR          +  W   ++P    S P SP R++           IP+   S
Sbjct: 164 SPRRSNPR----------LPRWQSSNFPV---SAPSSPTRRLH------HYTSIPECDES 204

Query: 232 SPTFSLVSRNPFGFREEVLSGGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCIATEFA 291
               S V    +G  + V             S TC P+           P  + +  +  
Sbjct: 205 D--VSTVDSCRWGNFQSV-----------NVSQTCPPS-----------PTFNLVG-KSV 239

Query: 292 FGCNATGLVKPWEGERIHEECVSDDLELTLG-NSKTR 327
                   VKPWEGE+IH+  + DDLELTLG N+K R
Sbjct: 240 SSVGVDVSVKPWEGEKIHDVGI-DDLELTLGHNTKGR 275

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FH80|BAM8_ARATH Beta-amylase 8 OS=Arabidopsis thaliana GN=BAM8 PE=2 SV=1

 Score = 78.2 bits (191), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/60 (58%), Positives = 44/60 (73%)

Query: 17  KRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKP 76
           K RER RRAI +++ AGLR YGN+ LP   D N+V+ AL  EAGW+VE DGTTYR+  +P
Sbjct: 97  KLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVIAALAREAGWSVEADGTTYRQSQQP 156

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

>sp|O80831|BAM7_ARATH Beta-amylase 7 OS=Arabidopsis thaliana GN=BAM7 PE=2 SV=2

 Score = 71.6 bits (174), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 46/104 (44%), Positives = 58/104 (55%), Gaps = 3/104 (2%)

Query: 11  KERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTY 70
           +E++  K RER RRAI A+I  GLR +GNY L    D N+V+ AL  EAGW V  DGTT+
Sbjct: 74  EEKERTKLRERHRRAITARILGGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTF 133

Query: 71  ---RKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSS 111
               +G KP      +   +SAS  +S Q SP A    S G  S
Sbjct: 134 PSKSQGTKPTGGSSAVAAGSSASHIASQQTSPPALRVVSSGLRS 177


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.312    0.128    0.408 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,406,377
Number of Sequences: 539616
Number of extensions: 6333975
Number of successful extensions: 18145
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 266
Number of HSP's that attempted gapping in prelim test: 16569
Number of HSP's gapped (non-prelim): 1135
length of query: 327
length of database: 191,569,459
effective HSP length: 118
effective length of query: 209
effective length of database: 127,894,771
effective search space: 26730007139
effective search space used: 26730007139
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
255562530	331	BRASSINAZOLE-RESISTANT 2 protein, putati	1.0	0.987	0.870	1e-134
224079019	331	predicted protein [Populus trichocarpa]	1.0	0.987	0.839	1e-130
225443710	341	PREDICTED: BES1/BZR1 homolog protein 4 [	0.990	0.950	0.782	1e-128
359493995	371	PREDICTED: BES1/BZR1 homolog protein 4-l	0.993	0.876	0.795	1e-122
224116984	319	predicted protein [Populus trichocarpa]	0.975	1.0	0.764	1e-120
118483381	328	unknown [Populus trichocarpa]	0.990	0.987	0.761	1e-115
224117406	328	predicted protein [Populus trichocarpa]	0.990	0.987	0.755	1e-114
449459312	327	PREDICTED: BES1/BZR1 homolog protein 4-l	0.993	0.993	0.772	1e-113
224116772	292	predicted protein [Populus trichocarpa]	0.886	0.993	0.753	1e-112
357451997	323	Brassinosteroid signaling positive regul	0.987	1.0	0.740	1e-109

>gi|255562530|ref|XP_002522271.1| BRASSINAZOLE-RESISTANT 2 protein, putative [Ricinus communis] gi|223538524|gb|EEF40129.1| BRASSINAZOLE-RESISTANT 2 protein, putative [Ricinus communis]

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 288/331 (87%), Positives = 304/331 (91%), Gaps = 4/331 (1%)

Query: 1   MTSGTRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAG 60
           MT+GTRMPTWKER+NNKRRERRRRAIAAKIYAGLRMYGNY+LPKHCDNNEVLKALCNEAG
Sbjct: 1   MTAGTRMPTWKERENNKRRERRRRAIAAKIYAGLRMYGNYKLPKHCDNNEVLKALCNEAG 60

Query: 61  WTVEEDGTTYRKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSSFPSPRSSHY 120
           WTVEEDGTTYRKGCKPVE MD+MGGSASAS CSSY  SPCASYNPSPGSSSFPSP SS Y
Sbjct: 61  WTVEEDGTTYRKGCKPVERMDIMGGSASASPCSSYHPSPCASYNPSPGSSSFPSPVSSRY 120

Query: 121 TPHANGSADANSLIPWLKNLSSSSSSASSKDPHHMYIHGGSISAPVTPPLSSPTCRTPRT 180
           T + NG+ADANSLIPWLKNLSS SSSASSK PHH+YIH GSISAPVTPPLSSPT RTPRT
Sbjct: 121 TANTNGNADANSLIPWLKNLSSGSSSASSKHPHHLYIHTGSISAPVTPPLSSPTSRTPRT 180

Query: 181 KNDWDEPTAVAAWAGQHYPFL----PSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFS 236
           KNDWD+P A  +WAGQ+YPFL    PSSTPPSPGRQVLPDSGWL+GIQIPQSGPSSPTFS
Sbjct: 181 KNDWDDPAAGPSWAGQNYPFLPSSMPSSTPPSPGRQVLPDSGWLAGIQIPQSGPSSPTFS 240

Query: 237 LVSRNPFGFREEVLSGGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCIATEFAFGCNA 296
           LVSRNPFGFR+E LSG  SRMWTPGQSGTCSPAVPAGVD+T+DVPM+D +A EFAFG N 
Sbjct: 241 LVSRNPFGFRDEPLSGAGSRMWTPGQSGTCSPAVPAGVDHTADVPMADSMAAEFAFGSNT 300

Query: 297 TGLVKPWEGERIHEECVSDDLELTLGNSKTR 327
           TGLVKPWEGERIHEECVSDDLELTLGNS TR
Sbjct: 301 TGLVKPWEGERIHEECVSDDLELTLGNSSTR 331

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224079019|ref|XP_002305719.1| predicted protein [Populus trichocarpa] gi|222848683|gb|EEE86230.1| predicted protein [Populus trichocarpa]

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 278/331 (83%), Positives = 296/331 (89%), Gaps = 4/331 (1%)

Query: 1   MTSGTRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAG 60
           MTSGTRMPTWKER+NNKRRERRRRAIAAKIY+GLRMYGNY+LPKHCDNNEVLKALC EAG
Sbjct: 1   MTSGTRMPTWKERENNKRRERRRRAIAAKIYSGLRMYGNYKLPKHCDNNEVLKALCKEAG 60

Query: 61  WTVEEDGTTYRKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSSFPSPRSSHY 120
           WTVEEDGTTYRKGCKPVE MD+MGGSASAS CSSY +SPCASYNPSP SSSFPSP SSHY
Sbjct: 61  WTVEEDGTTYRKGCKPVERMDIMGGSASASPCSSYHRSPCASYNPSPASSSFPSPVSSHY 120

Query: 121 TPHANGSADANSLIPWLKNLSSSSSSASSKDPHHMYIHGGSISAPVTPPLSSPTCRTPRT 180
             +ANG+AD NSLIPWLKNLSS SSSAS K PHH++IH GSISAPVTPPLSSPT RTPRT
Sbjct: 121 AANANGNADPNSLIPWLKNLSSGSSSASPKHPHHLFIHTGSISAPVTPPLSSPTARTPRT 180

Query: 181 KNDWDEPTAVAAWAGQHY----PFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFS 236
           KNDWD+  A  +W GQ+Y      +PSSTPPSPGR VLPDSGWL+GIQIPQSGPSSPTFS
Sbjct: 181 KNDWDDAAAGQSWMGQNYSFMPSSMPSSTPPSPGRHVLPDSGWLAGIQIPQSGPSSPTFS 240

Query: 237 LVSRNPFGFREEVLSGGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCIATEFAFGCNA 296
           LVSRNPFGFREE LSG  SRMWTPGQSGTCSPA+PAG+D T+DVPMSD +A EFAFG NA
Sbjct: 241 LVSRNPFGFREEALSGAGSRMWTPGQSGTCSPAIPAGIDQTADVPMSDSMAAEFAFGSNA 300

Query: 297 TGLVKPWEGERIHEECVSDDLELTLGNSKTR 327
            GLVKPWEGERIHEECVSDDLELTLGNS TR
Sbjct: 301 AGLVKPWEGERIHEECVSDDLELTLGNSNTR 331

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443710|ref|XP_002267082.1| PREDICTED: BES1/BZR1 homolog protein 4 [Vitis vinifera]

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 267/341 (78%), Positives = 291/341 (85%), Gaps = 17/341 (4%)

Query: 3   SGTRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWT 62
           +GTR+PTWKER+NNKRRERRRRAIAAKIY+GLRMYGNY+LPKHCDNNEVLKALCNEAGWT
Sbjct: 2   TGTRLPTWKERENNKRRERRRRAIAAKIYSGLRMYGNYKLPKHCDNNEVLKALCNEAGWT 61

Query: 63  VEEDGTTYRKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSSFPSPRSSH--- 119
           VEEDGTTYRKGCKPVE MD+MGGSASAS CSSYQ SPCASYNPSP +S  PSP +S+   
Sbjct: 62  VEEDGTTYRKGCKPVERMDIMGGSASASPCSSYQPSPCASYNPSPCASYNPSPCASYNPS 121

Query: 120 -------------YTPHANGSADANSLIPWLKNLSSSSSSASSKDPHHMYIHGGSISAPV 166
                        Y  +AN SADAN+LIPWLKNLSS SSS SSK PHH+YIHGGSISAPV
Sbjct: 122 PASSSFPSPVSSRYAANANASADANALIPWLKNLSSGSSSTSSKFPHHLYIHGGSISAPV 181

Query: 167 TPPLSSPTCRTPRTKNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIP 226
           TPPLSSPT RTPR KNDWD+ T    WAGQ Y FLPSSTPPSPGRQV PDSGW +G+QIP
Sbjct: 182 TPPLSSPTARTPRLKNDWDDTTGGPGWAGQRY-FLPSSTPPSPGRQVHPDSGWFAGMQIP 240

Query: 227 QSGPSSPTFSLVSRNPFGFREEVLSGGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCI 286
           Q GP+SPTFSLVS NPFGF+EEVL+GG SRMWTPGQSGTCSPAV AG D+T+DVPM+D I
Sbjct: 241 QGGPASPTFSLVSANPFGFKEEVLAGGGSRMWTPGQSGTCSPAVAAGSDHTADVPMADGI 300

Query: 287 ATEFAFGCNATGLVKPWEGERIHEECVSDDLELTLGNSKTR 327
           A EFAFG N TGLVKPWEGERIHEEC SD+LELTLG+S+TR
Sbjct: 301 AAEFAFGSNTTGLVKPWEGERIHEECGSDELELTLGSSRTR 341

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493995|ref|XP_002285537.2| PREDICTED: BES1/BZR1 homolog protein 4-like [Vitis vinifera]

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 261/328 (79%), Positives = 285/328 (86%), Gaps = 3/328 (0%)

Query: 1   MTSGTRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAG 60
           MTSG R+PTWKER+NNKRRERRRRAIAAKI+AGLRMYGNY+LPKHCDNNEVLKALCNEAG
Sbjct: 46  MTSGARLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAG 105

Query: 61  WTVEEDGTTYRKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSSFPSPRSSHY 120
           WTVE DGTTYRKGCKPVE MD++GGSASAS CSSY  SPCASYNPSP SSSFPSP SS Y
Sbjct: 106 WTVEPDGTTYRKGCKPVERMDIVGGSASASPCSSYHPSPCASYNPSPASSSFPSPASSSY 165

Query: 121 TPHANGSADANSLIPWLKNLSSSSSSASSKDPHHMYIHGGSISAPVTPPLSSPTCRTPRT 180
              AN +AD NSLIPWLKNLSS+SSSASS    H+YIH GSISAPVTPPLSSPT RTPR 
Sbjct: 166 A--ANPNADGNSLIPWLKNLSSASSSASSSKLPHLYIHSGSISAPVTPPLSSPTARTPRI 223

Query: 181 KNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFSLVSR 240
           K DWD+ +A   WAG HY FLPSSTPPSPGRQ+LPDS W +GI+IPQ GP+SPTFSLVS 
Sbjct: 224 KTDWDDQSARPGWAGAHYSFLPSSTPPSPGRQILPDSEWFAGIRIPQGGPTSPTFSLVSS 283

Query: 241 NPFGFREEVL-SGGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCIATEFAFGCNATGL 299
           NPFGF+EE+L S   SRMWTPGQSGTCSPA+ AG D+T+DVPMS+ I+ EFAFGCN  GL
Sbjct: 284 NPFGFKEEMLASASGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGCNTVGL 343

Query: 300 VKPWEGERIHEECVSDDLELTLGNSKTR 327
           VKPWEGERIHEEC SDDLELTLG+S+TR
Sbjct: 344 VKPWEGERIHEECGSDDLELTLGSSRTR 371

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116984|ref|XP_002317445.1| predicted protein [Populus trichocarpa] gi|222860510|gb|EEE98057.1| predicted protein [Populus trichocarpa]

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 250/327 (76%), Positives = 282/327 (86%), Gaps = 8/327 (2%)

Query: 1   MTSGTRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAG 60
           MTSGTR+PTWKER+NNKRRERRRRAIAAKI++GLRMYGN++LPKHCDNNEVLKALCNEAG
Sbjct: 1   MTSGTRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNFKLPKHCDNNEVLKALCNEAG 60

Query: 61  WTVEEDGTTYRKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSSFPSPRSSHY 120
           W VE DGTTYRKGCKP E+MD++GGSA+AS CSSY  SPCASYNPSPGSSSFPSP SS Y
Sbjct: 61  WAVEPDGTTYRKGCKPAEHMDIIGGSATASPCSSYLPSPCASYNPSPGSSSFPSPVSSSY 120

Query: 121 TPHANGSADANSLIPWLKNLSSSSSSASSKDPHHMYIHGGSISAPVTPPLSSPTCRTPRT 180
              AN + D NSL+PWLKNLSS+S   SSK P H+YIHGGSISAPVTPPLSSPT RTPR 
Sbjct: 121 A--ANANLDDNSLLPWLKNLSSAS---SSKLP-HLYIHGGSISAPVTPPLSSPTARTPRI 174

Query: 181 KNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFSLVSR 240
           K  W++      W GQHY  LPSSTPPSPGRQ++PD GW +GI++PQ GP+SPTFSLV+ 
Sbjct: 175 KTGWEDQPIHPGWCGQHY--LPSSTPPSPGRQIVPDPGWFAGIRLPQGGPTSPTFSLVAS 232

Query: 241 NPFGFREEVLSGGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCIATEFAFGCNATGLV 300
           NPFGF+EE L+GG SRMWTPGQSGTCSPA+ AG D T+D+PM++ I+ EFAF CNATGLV
Sbjct: 233 NPFGFKEEALAGGGSRMWTPGQSGTCSPAIAAGSDQTADIPMAEVISDEFAFRCNATGLV 292

Query: 301 KPWEGERIHEECVSDDLELTLGNSKTR 327
           KPWEGERIHEEC SDDLELTLGNS+TR
Sbjct: 293 KPWEGERIHEECGSDDLELTLGNSRTR 319

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118483381|gb|ABK93591.1| unknown [Populus trichocarpa]

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 252/331 (76%), Positives = 281/331 (84%), Gaps = 7/331 (2%)

Query: 1   MTSGTRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAG 60
           MTSGTR+PTWKER+NNKRRERRRRAIAAKI++GLRMYGNY+LPKHCDNNEVLKALCNEAG
Sbjct: 1   MTSGTRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAG 60

Query: 61  WTVEEDGTTYRKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSSFPSPRSSHY 120
           WTVE DGTT+RKGCKPVE MD++G SA+ S CSSY  SPCASYNPSPGSSSFPSP SS Y
Sbjct: 61  WTVEPDGTTFRKGCKPVERMDILGVSATTSPCSSYHPSPCASYNPSPGSSSFPSPASSSY 120

Query: 121 TPHANGSADANSLIPWLKNLSSSSSSASSKDPHHMYIHGGSISAPVTPPLSSPTCRTPRT 180
              AN + D NSLIPWLKNLSS+SSSASS    H+YIHGGSISAPVTPPLSSPT RT R 
Sbjct: 121 A--ANANMDCNSLIPWLKNLSSASSSASSSKFPHLYIHGGSISAPVTPPLSSPTARTARI 178

Query: 181 KNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFSLVSR 240
           K DW++ +    W GQHY FLPSSTPPSPGRQ++PD  W  GI+IPQ GP+SPTFSLV+ 
Sbjct: 179 KADWEDQSIRPGWGGQHYSFLPSSTPPSPGRQIVPDPEWFRGIRIPQGGPTSPTFSLVAS 238

Query: 241 NPFGFREEVL----SGGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCIATEFAFGCNA 296
           NPFGF+EE      S G SRMWTPGQSGTCSPA+ AG D+T+D+PM++ I+ EFAF CNA
Sbjct: 239 NPFGFKEEAFGGGGSNGGSRMWTPGQSGTCSPAIAAGSDHTADIPMAE-ISDEFAFRCNA 297

Query: 297 TGLVKPWEGERIHEECVSDDLELTLGNSKTR 327
           TGLVKPWEGERIHEEC SDDLELTLGNS+TR
Sbjct: 298 TGLVKPWEGERIHEECGSDDLELTLGNSRTR 328

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117406|ref|XP_002331704.1| predicted protein [Populus trichocarpa] gi|222874310|gb|EEF11441.1| predicted protein [Populus trichocarpa]

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 250/331 (75%), Positives = 281/331 (84%), Gaps = 7/331 (2%)

Query: 1   MTSGTRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAG 60
           MTSGTR+PTWKER+NNKRRERRRRAIAAKI++GLRMYGNY+LPKHCDNNEVLKALCNEAG
Sbjct: 1   MTSGTRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAG 60

Query: 61  WTVEEDGTTYRKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSSFPSPRSSHY 120
           WTVE DGTT+RKGCKPVE MD++G SA+ S CSSY  SPCASYNPSPGSSSFPSP SS Y
Sbjct: 61  WTVEPDGTTFRKGCKPVERMDILGVSATTSPCSSYHPSPCASYNPSPGSSSFPSPASSSY 120

Query: 121 TPHANGSADANSLIPWLKNLSSSSSSASSKDPHHMYIHGGSISAPVTPPLSSPTCRTPRT 180
              AN + D NSLIPWLKNLSS+SSSASS    H+YIHGGSISAPVTPPLSSPT RT R 
Sbjct: 121 A--ANANMDCNSLIPWLKNLSSASSSASSSKFPHLYIHGGSISAPVTPPLSSPTARTARI 178

Query: 181 KNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFSLVSR 240
           K DW++ +    W GQHY FLPSSTPPSPGRQ++PD  W  G+++PQ GP+SPTFSLV+ 
Sbjct: 179 KADWEDQSIRPGWGGQHYSFLPSSTPPSPGRQIVPDPEWFRGVRMPQGGPTSPTFSLVAS 238

Query: 241 NPFGFREEVL----SGGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCIATEFAFGCNA 296
           NPFGF+EE      S G SRMWTPGQSGTCSPA+ AG D+T+D+PM++ I+ EFAF CNA
Sbjct: 239 NPFGFKEEAFGGGGSNGGSRMWTPGQSGTCSPAIAAGSDHTADIPMAE-ISDEFAFRCNA 297

Query: 297 TGLVKPWEGERIHEECVSDDLELTLGNSKTR 327
           TGLVKPWEGERIHEEC SDDLELTLGNS+TR
Sbjct: 298 TGLVKPWEGERIHEECGSDDLELTLGNSRTR 328

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459312|ref|XP_004147390.1| PREDICTED: BES1/BZR1 homolog protein 4-like [Cucumis sativus] gi|449530622|ref|XP_004172293.1| PREDICTED: BES1/BZR1 homolog protein 4-like [Cucumis sativus]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 254/329 (77%), Positives = 279/329 (84%), Gaps = 4/329 (1%)

Query: 1   MTSGTRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAG 60
           MTSGTRMPTWKER+NNKRRERRRRAIAAKI+ GLRMYGNY+LPKHCDNNEVLKALC+EAG
Sbjct: 1   MTSGTRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCDEAG 60

Query: 61  WTVEEDGTTYRKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSSFPSPRSSHY 120
           WTVEEDGTTYRKGCKPVE  ++MGGSASAS CSSYQ SP ASYNPSP SSSFPSP+SS Y
Sbjct: 61  WTVEEDGTTYRKGCKPVE-RNIMGGSASASPCSSYQPSPRASYNPSPASSSFPSPKSSRY 119

Query: 121 TPHANGSA-DANSLIPWLKNLSSSSSSASSKDPHHMYIHGGSISAPVTPPLSSPTCRTPR 179
             + N +  D NSLIPWLKNLSS SSSASS+ PHH++I+ GSISAPVTPP SSPT RTPR
Sbjct: 120 AMNGNDNGTDPNSLIPWLKNLSSGSSSASSRLPHHLFINCGSISAPVTPPSSSPTARTPR 179

Query: 180 TKNDWDEPTAVA-AWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFSLV 238
             NDWD   AVA AWA Q +  LP+STP SPGRQVL D  WL  I+IPQSGPSSPTFSLV
Sbjct: 180 KPNDWDNHPAVAPAWAAQRFSCLPTSTPQSPGRQVLADPAWLDSIRIPQSGPSSPTFSLV 239

Query: 239 SRNPFGFREEVLSGGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCIATEFAFGCNATG 298
           +RNPFGF+ E +S G SR WTP QSGTCSP V AG+D+TSDVPM+D  AT+FAFG  + G
Sbjct: 240 ARNPFGFK-EAMSAGVSRNWTPTQSGTCSPTVAAGIDHTSDVPMTDGTATDFAFGSCSIG 298

Query: 299 LVKPWEGERIHEECVSDDLELTLGNSKTR 327
           LVKPWEGERIHEEC+SDDLELTLGNS TR
Sbjct: 299 LVKPWEGERIHEECISDDLELTLGNSSTR 327

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116772|ref|XP_002317388.1| predicted protein [Populus trichocarpa] gi|222860453|gb|EEE98000.1| predicted protein [Populus trichocarpa]

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 248/329 (75%), Positives = 265/329 (80%), Gaps = 39/329 (11%)

Query: 1   MTSGTRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAG 60
           MTSGTRMPTWKER+NNKRRERRRRAIAAKIYAGLRMYG+Y+LPKHCDNNEVLKALCNEAG
Sbjct: 1   MTSGTRMPTWKERENNKRRERRRRAIAAKIYAGLRMYGSYKLPKHCDNNEVLKALCNEAG 60

Query: 61  WTVEEDGTTYRKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSSFPSPRSSHY 120
           WTVEEDGTTYRKGCKPVE MD++GGSASAS CSSY QSPCASYNPSP SSSFPSP SS Y
Sbjct: 61  WTVEEDGTTYRKGCKPVERMDIIGGSASASPCSSYHQSPCASYNPSPASSSFPSPVSSRY 120

Query: 121 TPHANGS--ADANSLIPWLKNLSSSSSSASSKDPHHMYIHGGSISAPVTPPLSSPTCRTP 178
             + NG+  ADANSLIPWL+NLSS SSSAS K P+H++IH GSISAPVTPPLSSPT RTP
Sbjct: 121 AANGNGNVDADANSLIPWLRNLSSGSSSASPKHPNHLFIHTGSISAPVTPPLSSPTARTP 180

Query: 179 RTKNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFSLV 238
                                                 SGWL+GIQIPQSGPSSPTFSLV
Sbjct: 181 H-------------------------------------SGWLAGIQIPQSGPSSPTFSLV 203

Query: 239 SRNPFGFREEVLSGGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCIATEFAFGCNATG 298
           SRNPFGF+EE LSG  SRMWTPGQSGTCSPAVPAG+D T+DVPM+D +A EFAFG N  G
Sbjct: 204 SRNPFGFKEEALSGAGSRMWTPGQSGTCSPAVPAGIDQTADVPMADSMAAEFAFGSNTAG 263

Query: 299 LVKPWEGERIHEECVSDDLELTLGNSKTR 327
           LVKPWEGERIHEECVSDDLELTLGNS TR
Sbjct: 264 LVKPWEGERIHEECVSDDLELTLGNSSTR 292

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357451997|ref|XP_003596275.1| Brassinosteroid signaling positive regulator-related protein [Medicago truncatula] gi|355485323|gb|AES66526.1| Brassinosteroid signaling positive regulator-related protein [Medicago truncatula]

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 242/327 (74%), Positives = 268/327 (81%), Gaps = 4/327 (1%)

Query: 1   MTSGTRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAG 60
           MTSGTR PTWKER+NNKRRERRRRAIAAKI++GLRMYGNY+LPKHCDNNEVLKALCNEAG
Sbjct: 1   MTSGTRQPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAG 60

Query: 61  WTVEEDGTTYRKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSSFPSPRSSHY 120
           W VE DGTTYRKGCKP E +DV+GGS   S CSSY  SPCASYNPSPGSSSFPSPRSSH 
Sbjct: 61  WIVEPDGTTYRKGCKPAERIDVIGGSTMGSPCSSYHVSPCASYNPSPGSSSFPSPRSSH- 119

Query: 121 TPHANGSADANSLIPWLKNLSSSSSSASSKDPHHMYIHGGSISAPVTPPLSSPTCRTPRT 180
               N + D NSLIPWLKNLSS SSSASS     +YIH GSISAPVTPPLSSPT R+P+ 
Sbjct: 120 --AVNPNGDGNSLIPWLKNLSSGSSSASSSKLPQLYIHTGSISAPVTPPLSSPTARSPQR 177

Query: 181 KNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFSLVSR 240
           K DW++ +    W GQ Y F PSSTPPSPGRQVL D  W +GI++P SG +SPTFSLV+ 
Sbjct: 178 KADWEDQSTRPGWGGQQYSFQPSSTPPSPGRQVL-DPDWFAGIRMPHSGQTSPTFSLVAT 236

Query: 241 NPFGFREEVLSGGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCIATEFAFGCNATGLV 300
           NPFGFREEV  G  SRMWTPGQSGTCSPA+ AG D+ +D+PMS+ I+ EFAFG +A GLV
Sbjct: 237 NPFGFREEVFCGSDSRMWTPGQSGTCSPALAAGSDHNADIPMSEAISDEFAFGSSAVGLV 296

Query: 301 KPWEGERIHEECVSDDLELTLGNSKTR 327
           KPWEGERIHE+  SDDLELTLG SKTR
Sbjct: 297 KPWEGERIHEDSGSDDLELTLGTSKTR 323

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
TAIR|locus:2037518	325	BEH4 "BES1/BZR1 homolog 4" [Ar	0.966	0.972	0.571	1.4e-94
TAIR|locus:2117154	284	BEH3 "BES1/BZR1 homolog 3" [Ar	0.498	0.573	0.601	3.4e-45
TAIR|locus:2037279	336	BZR1 "BRASSINAZOLE-RESISTANT 1	0.220	0.214	0.652	5.7e-38
TAIR|locus:2101719	276	BEH1 "BES1/BZR1 homolog 1" [Ar	0.235	0.278	0.641	1e-32
TAIR|locus:2016472	357	BES1 "BRI1-EMS-SUPPRESSOR 1" [	0.593	0.543	0.375	8.2e-28
TAIR|locus:2158455	689	BMY2 "beta-amylase 2" [Arabido	0.159	0.075	0.557	6.3e-09
TAIR|locus:2050720	691	BAM7 "beta-amylase 7" [Arabido	0.159	0.075	0.509	1.4e-05

TAIR|locus:2037518 BEH4 "BES1/BZR1 homolog 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
 Identities = 192/336 (57%), Positives = 214/336 (63%)

Query:     1 MTSGTRMPTWXXXXXXXXXXXXXXAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAG 60
             MTSGTRMPTW              AIAAKI+ GLRMYGNY LPKHCDNNEVLKALCNEAG
Sbjct:     1 MTSGTRMPTWRERENNKRRERRRRAIAAKIFTGLRMYGNYELPKHCDNNEVLKALCNEAG 60

Query:    61 WTVEEDGTTYRKGC-KPVEYMDVMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH 119
             W VE DGTTYRKGC +PVE M++ GG                                  
Sbjct:    61 WIVEPDGTTYRKGCSRPVERMEIGGGSATASPCSSYQPSPCASYNPSPGSSNFMSPASSS 120

Query:   120 YTPHANGSADANSLIPWLKNLXXXXXXXXXKD---PHHMYIHGGSISAPVTPPLSSPTCR 176
             +    +G  D  SLIPWLK+L              P+++YI GGSISAPVTPPLSSPT R
Sbjct:   121 FANLTSG--DGQSLIPWLKHLSTTSSSSASSSSRLPNYLYIPGGSISAPVTPPLSSPTAR 178

Query:   177 TPRTKNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFS 236
             TPR   DW +          +  F  SSTPPSP RQ++PDS W SGIQ+ QS P+SPTFS
Sbjct:   179 TPRMNTDWQQ---------LNNSFFVSSTPPSPTRQIIPDSEWFSGIQLAQSVPASPTFS 229

Query:   237 LVSRNPFGFREEVLS----GGPSRMWTPGQSGTCSPAVPAGVDNTSDVPMSDCIAT-EFA 291
             LVS+NPFGF+EE  S    GG SRMWTPGQSGTCSPA+P G D T+DVPMS+ +A  EFA
Sbjct:   230 LVSQNPFGFKEEAASAAGGGGGSRMWTPGQSGTCSPAIPPGADQTADVPMSEAVAPPEFA 289

Query:   292 FGCNATGLVKPWEGERIHEECVSDDLELTLGNSKTR 327
             FG N  GLVK WEGERIHEE  SDDLELTLGNS TR
Sbjct:   290 FGSNTNGLVKAWEGERIHEESGSDDLELTLGNSSTR 325

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2117154 BEH3 "BES1/BZR1 homolog 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 107/178 (60%), Positives = 120/178 (67%)

Query:   161 SISAPVTPPLSSPTCRTPRTKN-DWDEPTAVAAWAGQHYPFLPSSTPP---SPGR-QV-L 214
             S  +P T P        P  KN   + P+ +  + G      P  TPP   SP R QV +
Sbjct:   111 SFPSP-TNPFGDANSLIPWLKNLSSNSPSKLPFFHGNSIS-APV-TPPLARSPTRDQVTI 167

Query:   215 PDSGWLSGIQIPQSGPSSPTFSLVSRNPFGFREEVLSGGP--SRMWTPGQSGTCSPAVPA 272
             PDSGWLSG+Q PQSGPSSPTFSLVSRNPF F +E    G   S MWTPGQSG CSPA+PA
Sbjct:   168 PDSGWLSGMQTPQSGPSSPTFSLVSRNPF-FDKEAFKMGDCNSPMWTPGQSGNCSPAIPA 226

Query:   273 GVDNTSDVPMSDCIATEFAFGCNA---TGLVKPWEGERIHEECVSDDLELTLGNSKTR 327
             GVD  SDVPM+D +  EFAFGCNA    G+VKPWEGERIH ECVSDDLELTLGNS+TR
Sbjct:   227 GVDQNSDVPMADGMTAEFAFGCNAMAANGMVKPWEGERIHGECVSDDLELTLGNSRTR 284

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2037279 BZR1 "BRASSINAZOLE-RESISTANT 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 257 (95.5 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
 Identities = 47/72 (65%), Positives = 51/72 (70%)

Query:     6 RMPTWXXXXXXXXXXXXXXAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEE 65
             R P+W              A+AAKIY GLR  G+Y LPKHCDNNEVLKALC EAGW VEE
Sbjct:    23 RKPSWRERENNRRRERRRRAVAAKIYTGLRAQGDYNLPKHCDNNEVLKALCVEAGWVVEE 82

Query:    66 DGTTYRKGCKPV 77
             DGTTYRKGCKP+
Sbjct:    83 DGTTYRKGCKPL 94

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IMP

GO:0003677 "DNA binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005829 "cytosol" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0048316 "seed development" evidence=IMP

GO:0048481 "ovule development" evidence=IMP

TAIR|locus:2101719 BEH1 "BES1/BZR1 homolog 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 258 (95.9 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
 Identities = 50/78 (64%), Positives = 54/78 (69%)

Query:     2 TSGT-RMPTWXXXXXXXXXXXXXXAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAG 60
             T+ T RMPTW              AIAAKI+ GLR  GNY+LPKHCDNNEVLKALC EAG
Sbjct:     9 TAATGRMPTWKERENNKKRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVLKALCLEAG 68

Query:    61 WTVEEDGTTYRKGCKPVE 78
             W V EDGTTYRKG +P E
Sbjct:    69 WIVHEDGTTYRKGSRPTE 86

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2016472 BES1 "BRI1-EMS-SUPPRESSOR 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 80/213 (37%), Positives = 100/213 (46%)

Query:     6 RMPTWXXXXXXXXXXXXXXAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEE 65
             R P+W              A+AAKIY GLR  GNY LPKHCDNNEVLKALC+EAGW VEE
Sbjct:    44 RKPSWRERENNRRRERRRRAVAAKIYTGLRAQGNYNLPKHCDNNEVLKALCSEAGWVVEE 103

Query:    66 DGTTYRKGCKPVEYMDVMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHY-TPHA 124
             DGTTYRKG KP+   D+ G                                   + +P  
Sbjct:   104 DGTTYRKGHKPLPG-DMAGSSSRATPYSSHNQSPLSSTFDSPILSYQVSPSSSSFPSPSR 162

Query:   125 NGSA-DANSLIPWLKNLXXXXXXXXXKDPHHMYIHGGSISAPVTPPLSSPTCRTPRTKND 183
              G   + +++ P+L+N            P  +     S SAPVTPP+SSPT R P+    
Sbjct:   163 VGDPHNISTIFPFLRN----GGIPSSLPPLRI-----SNSAPVTPPVSSPTSRNPKPLPT 213

Query:   184 WDEPT----AVAA---WAGQHYPFLPSSTPPSP 209
             W+  T    ++AA       +YPF   S P SP
Sbjct:   214 WESFTKQSMSMAAKQSMTSLNYPFYAVSAPASP 246

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IGI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0003677 "DNA binding" evidence=IDA

TAIR|locus:2158455 BMY2 "beta-amylase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 6.3e-09, P = 6.3e-09
 Identities = 29/52 (55%), Positives = 38/52 (73%)

Query:    25 AIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKP 76
             AI +++ AGLR YGN+ LP   D N+V+ AL  EAGW+VE DGTTYR+  +P
Sbjct:   105 AITSRMLAGLRQYGNFPLPARADMNDVIAALAREAGWSVEADGTTYRQSQQP 156

GO:0000272 "polysaccharide catabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0016161 "beta-amylase activity" evidence=IEA;ISS;IDA

GO:0043169 "cation binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0048831 "regulation of shoot system development" evidence=IMP

TAIR|locus:2050720 BAM7 "beta-amylase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 28/55 (50%), Positives = 34/55 (61%)

Query:    25 AIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTY---RKGCKP 76
             AI A+I  GLR +GNY L    D N+V+ AL  EAGW V  DGTT+    +G KP
Sbjct:    88 AITARILGGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSKSQGTKP 142


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.133   0.435    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      327       271   0.00098  114 3  11 23  0.41    34
                                                     32  0.40    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  242 KB (2130 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.57u 0.13s 25.70t   Elapsed:  00:00:01
  Total cpu time:  25.57u 0.13s 25.70t   Elapsed:  00:00:01
  Start:  Tue May 21 00:22:27 2013   End:  Tue May 21 00:22:28 2013

GO:0000272 "polysaccharide catabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0016161 "beta-amylase activity" evidence=IEA;ISS;IDA

GO:0043169 "cation binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0048831 "regulation of shoot system development" evidence=IMP

GO:0010048 "vernalization response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZV88	BEH4_ARATH	No assigned EC number	0.7053	0.9663	0.9723	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	327
pfam05687	151	pfam05687, DUF822, Plant protein of unknown functi	2e-69
PLN02705	681	PLN02705, PLN02705, beta-amylase	5e-19
PLN02905	702	PLN02905, PLN02905, beta-amylase	2e-16
pfam12887	183	pfam12887, SICA_alpha, SICA extracellular alpha do	0.003

>gnl|CDD|218693 pfam05687, DUF822, Plant protein of unknown function (DUF822)

 Score =  213 bits (543), Expect = 2e-69
 Identities = 100/154 (64%), Positives = 109/154 (70%), Gaps = 12/154 (7%)

Query: 2   TSGTRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGW 61
               R PTWKER+NNKRRERRRRAIAAKIYAGLR +GNY LPKHCDNNEVLKALC EAGW
Sbjct: 1   GGSGRKPTWKERENNKRRERRRRAIAAKIYAGLRAHGNYNLPKHCDNNEVLKALCREAGW 60

Query: 62  TVEEDGTTYRKGCKPVEYMDVMGGSASASACSSYQ--------QSPCASYNPSPGSSSFP 113
            VE DGTTYRKGCKP+E M+  G SA+AS CSSYQ         SP  SY+ SP SSSFP
Sbjct: 61  VVEPDGTTYRKGCKPLERMEGAGSSATASPCSSYQLSPVSSAFPSPVPSYSASPASSSFP 120

Query: 114 SPRSSHYTPHANGSADANSLIPWLKNLSSSSSSA 147
           SP S      +   + A SL+PWL  LS  SSS 
Sbjct: 121 SPSSL----DSIPISSAASLLPWLSVLSLVSSSL 150

This family consists of the N terminal regions of several plant proteins of unknown function. Length = 151

>gnl|CDD|178307 PLN02705, PLN02705, beta-amylase

 Score = 87.3 bits (216), Expect = 5e-19
 Identities = 39/66 (59%), Positives = 48/66 (72%)

Query: 11  KERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTY 70
           KE++  K RER RRAI +++ AGLR YGN+ LP   D N+VL AL  EAGWTVE DGTTY
Sbjct: 83  KEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWTVEADGTTY 142

Query: 71  RKGCKP 76
           R+  +P
Sbjct: 143 RQSPQP 148

Length = 681

>gnl|CDD|178493 PLN02905, PLN02905, beta-amylase

 Score = 79.7 bits (196), Expect = 2e-16
 Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 3/104 (2%)

Query: 11  KERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTY 70
           +E++  K RER RRAI A+I AGLR +GNY L    D N+V+ AL  EAGW V  DGTT+
Sbjct: 85  EEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTF 144

Query: 71  ---RKGCKPVEYMDVMGGSASASACSSYQQSPCASYNPSPGSSS 111
               +G +P      +  ++S+S   S Q  P +    S G  S
Sbjct: 145 PSRSQGTRPAGGTSAVAATSSSSHLVSQQTPPPSLRGVSSGYRS 188

Length = 702

>gnl|CDD|221832 pfam12887, SICA_alpha, SICA extracellular alpha domain

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 15/61 (24%)

Query: 34  LRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKG------CKPVEYMDVMGGSA 87
             +YG+     HC   EV+K + +     VEE    +         CK +   D++ G +
Sbjct: 124 SEIYGD-----HCKLEEVIKKISD----KVEEKLKGHLGSGGNLNKCKGITPEDLLLGKS 174

Query: 88  S 88
            
Sbjct: 175 L 175

The SICA (schizont-infected cell agglutination) proteins of P. knowlesi, one of the variant antigen gene families, are associated with parasitic virulence. These proteins are comprised of multiple domains, with the extracellular domains occurring at different frequencies. This domain is typically found at the N-terminus, with 1 or 2 copies per protein. The domain is cysteine-rich domain and similar to pfam12878. Length = 183

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	327
PF05687	150	DUF822: Plant protein of unknown function (DUF822)	100.0
PLN02905	702	beta-amylase	100.0
PLN02705	681	beta-amylase	100.0

>PF05687 DUF822: Plant protein of unknown function (DUF822); InterPro: IPR008540 This group of proteins contains members of the BZR1/LAT61 family of plant transcriptional repressors involved in controlling the response to Brassinosteroids (BRs)

Probab=100.00  E-value=7.7e-63  Score=425.51  Aligned_cols=140  Identities=75%  Similarity=1.178  Sum_probs=132.2

Q ss_pred             CCCCCCCChhhhhhhHHHHHHHHHHHHHHHHhhhhhCCCCCCCcCChHHHHHHHHHHhCceEcCCCccccccCCCCcccc
Q 020383            2 TSGTRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMD   81 (327)
Q Consensus         2 ts~~r~ptw~ErEnnk~RERrRRaIaakI~aGlr~~gny~lp~~~d~n~vl~al~~eagw~ve~dgttyr~g~kp~~~~~   81 (327)
                      |++.|+||||||||||+|||||||||+|||+|||+||||+|||||||||||||||+||||+||+|||||||+|||++.++
T Consensus         1 ~~~~r~pt~kErEnnk~RERrRRAIaakIfaGLR~~Gny~Lp~~aD~NeVLkALc~eAGw~Ve~DGTtyr~~~~~~~~~~   80 (150)
T PF05687_consen    1 GSGGRRPTWKERENNKRRERRRRAIAAKIFAGLRAHGNYKLPKHADNNEVLKALCREAGWTVEPDGTTYRKGCKPPEPME   80 (150)
T ss_pred             CCCcccccHhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHHhCCEEEccCCCeeccCCCCCcccc
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCccC--------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHhhhhccCCCC
Q 020383           82 VMGGSASASACSSYQ--------QSPCASYNPSPGSSSFPSPRSSHYTPHANGSADANSLIPWLKNLSSSSS  145 (327)
Q Consensus        82 ~~G~s~~~spcSS~~--------pSp~aSY~~SP~SSSFPSp~~s~~~~~~~~s~~~ssLiPwLknlss~~~  145 (327)
                      ++|.++.++||++|+        ++|++||+++|.+|+||||++.|.+.+.    ++++|||||||+++.++
T Consensus        81 ~~g~s~~~sp~ss~~~~~~ss~~~sp~~s~~~s~~ss~~pSp~~~d~~~~~----~~~~~~p~~~~~~~~~s  148 (150)
T PF05687_consen   81 IVGSSASASPCSSYQLSPNSSAFPSPVPSYQPSPSSSSFPSPSSLDSINNS----SSSSLIPWLKNLSSGSS  148 (150)
T ss_pred             ccccCCCCCCcCCCcCCccccCcCCcccccCCCcCCCCCCCCccccccccc----ccccccchhhccccCcC
Confidence            999999999999988        8999999999999999999999976542    45899999999987554

BRs are plant hormones that play essential roles in growth and development. BZR1 binds directly to DNA repressing the synthesis of genes involved in BR synthesis. Phosphorylation of BZR1 by BIN1 targets BZR1 to the 20S proteosome, while dephosphorylation leads to nuclear accumulation of BZR1 [].

>PLN02905 beta-amylase

Probab=100.00  E-value=1.1e-35  Score=300.41  Aligned_cols=93  Identities=43%  Similarity=0.586  Sum_probs=83.1

Q ss_pred             CCCCCChhhhhhhHHHHHHHHHHHHHHHHhhhhhCCCCCCCcCChHHHHHHHHHHhCceEcCCCccccccCCCCcccccc
Q 020383            4 GTRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVM   83 (327)
Q Consensus         4 ~~r~ptw~ErEnnk~RERrRRaIaakI~aGlr~~gny~lp~~~d~n~vl~al~~eagw~ve~dgttyr~g~kp~~~~~~~   83 (327)
                      ..|.|+||||||||+|||||||||+|||+|||+||||+||+|||+||||||||+||||+||+||||||+.++.+...  .
T Consensus        78 ~~~~~~~~ere~~~~rer~rrai~~~i~~glr~~g~~~lp~~~d~n~v~~~l~~eag~~v~~dg~~y~~~~~~~~~~--~  155 (702)
T PLN02905         78 SRRSRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQGTRPA--G  155 (702)
T ss_pred             cCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHhcCcEEcCCCCcccccCCCCCCC--C
Confidence            37999999999999999999999999999999999999999999999999999999999999999999555433211  3


Q ss_pred             CCCCCCCCCCccCCC
Q 020383           84 GGSASASACSSYQQS   98 (327)
Q Consensus        84 G~s~~~spcSS~~pS   98 (327)
                      |.|+.+.+|+|+|.-
T Consensus       156 ~~~~~~~~~~~~~~~  170 (702)
T PLN02905        156 GTSAVAATSSSSHLV  170 (702)
T ss_pred             Ccccccccccccccc
Confidence            777889999998863

>PLN02705 beta-amylase

Probab=100.00  E-value=9.9e-34  Score=285.55  Aligned_cols=88  Identities=47%  Similarity=0.730  Sum_probs=78.9

Q ss_pred             CCCCChhhhhhhHHHHHHHHHHHHHHHHhhhhhCCCCCCCcCChHHHHHHHHHHhCceEcCCCccccccCCCCccccccC
Q 020383            5 TRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVMG   84 (327)
Q Consensus         5 ~r~ptw~ErEnnk~RERrRRaIaakI~aGlr~~gny~lp~~~d~n~vl~al~~eagw~ve~dgttyr~g~kp~~~~~~~G   84 (327)
                      +|.|+||||||||+|||||||||+|||+|||+||||+||+|||+||||||||+||||+||+|||||||+++|.+ +..++
T Consensus        77 ~~~~~~~e~e~~~~rer~rrai~~ki~aglr~~g~~~lp~~~d~n~vl~al~~eagw~v~~dg~~yr~~~~~~~-~~~~~  155 (681)
T PLN02705         77 GKREREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWTVEADGTTYRQSPQPSH-VGSFP  155 (681)
T ss_pred             CCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcccchHHHHHHHHHhcCcEEcCCCCcccCCCCCcc-ccccc
Confidence            67899999999999999999999999999999999999999999999999999999999999999999988764 66665


Q ss_pred             CCCCCCCCC
Q 020383           85 GSASASACS   93 (327)
Q Consensus        85 ~s~~~spcS   93 (327)
                      --.--+|-+
T Consensus       156 ~~~~~~~~~  164 (681)
T PLN02705        156 VRSVESPLS  164 (681)
T ss_pred             ccCccCcch
Confidence            544445543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	327
1twf_A	1733	B220, DNA-directed RNA polymerase II largest subun	5e-04

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733

 Score = 40.8 bits (95), Expect = 5e-04
 Identities = 51/192 (26%), Positives = 69/192 (35%), Gaps = 13/192 (6%)

Query: 80   MDVMGGSASASACSSYQQSPCASYNPSPG-SSSFPSPRSSHYTPHANG-SADANSLIPWL 137
                GG+    A S +     A  +P  G SS   SP S  Y+P +   S  + S  P  
Sbjct: 1508 FTAYGGADYGEATSPFGAYGEAPTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTS 1567

Query: 138  KNLSSSSSSASSKDPHHMYIHGGSISAPVTPPLSSPTCRTPRTKNDWDEPTAVAAWAGQH 197
             + S +S S S   P +      S S   T P  SPT  +    +    PT+       +
Sbjct: 1568 PSYSPTSPSYSPTSPSYS---PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-----SY 1619

Query: 198  YPFLPSSTPPSPGRQVLPDSGWLSGIQIPQSGPSSPTFSLVSRNPFGFREEVLSGGPSRM 257
             P  PS +P SP     P S   S    P   P+SP++S  S              PS  
Sbjct: 1620 SPTSPSYSPTSPSYS--PTSPSYSP-TSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYS 1676

Query: 258  WTPGQSGTCSPA 269
             T       SP+
Sbjct: 1677 PTSPSYSPTSPS 1688

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	327
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	83.62

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=83.62  E-value=0.88  Score=37.12  Aligned_cols=54  Identities=19%  Similarity=0.207  Sum_probs=41.1

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHhhhhhCCC---------------CCCCcCChHHHHHHHHHHhCceEcC
Q 020383           12 ERDNNKRRERRRRAIAAKIYAGLRMYGNY---------------RLPKHCDNNEVLKALCNEAGWTVEE   65 (327)
Q Consensus        12 ErEnnk~RERrRRaIaakI~aGlr~~gny---------------~lp~~~d~n~vl~al~~eagw~ve~   65 (327)
                      +.+..+.++++++..+.+++..|...|.+               .+|+..|..+|.+.|.++.|..|-.
T Consensus       273 ~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~rs~~v~~~~~p~~~~~~~l~~~L~~~~gI~v~~  341 (377)
T d1vjoa_         273 AQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDGVDGKAVARRLLNEHNIEVGG  341 (377)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHCEECEE
T ss_pred             hhcCchHHHHHHHHHhhhhhhhhhccCceeecChHhcCCeEEEEECCCCCCHHHHHHHHHhcCCEEEec
Confidence            33445667777778888999999877754               3456678899999999999998743