Citrus Sinensis ID: 020446

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320------
MLSRLMNFLRACWRPSSDRYVHTSADTAGRQEGLLWYKDNGQHINGEFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHSVRYLSVYNSTGLQHSVIN
cHHHHHHHHHHHccccccccccccccccccccccEEEEccccccccEEEEEEEcccccccccEEEccccccccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEEEccEEEEEEcccccEEEEEcccccccEEEEEcccccccccHHHHHHHHHcccccccEEEEEcccEEEccEEEcccccccccccccccccccHHHHcccccccccccEEEEEEEEEEEEccccEEEEEEcccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHcc
cHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcEccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccHcccccEEEEEEEEccEEEEEEcccccEEEEEccccccEEEEEEcccccccccHHHHHHHHHHcccccEEEEEEccccEEcEEEEEEEccccEEEccccccccccHHHccccccccccEEcccccEEEEEcccccEEEEEEcccHHHHccHHHHHHHHHHcccccccHHHHHHHHHHHcccc
MLSRLMNFLRAcwrpssdryvhtsadtagrqegllwykdngqhingEFSMAVVQANNlledqsqiesgplstlesgpygtfigiydghggpetsrYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVtkqwpmkpqiaavgscCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEmhsmhpddsqiVVLKHNVWRVKGLIQVSRSIGDVYLkkaeynreplyakfrlrepfrkpilssepsisahelqpfDQFLIFASDglwehlsnqdavdivqnhphsvRYLSVynstglqhsvin
MLSRLMNFLRAcwrpssdryvhtsadtagrqEGLLWYKDNGQHINGEFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGliqvsrsigdvylkkaeynreplyakfrlrepfrKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHSVRYLSvynstglqhsvin
MLSRLMNFLRACWRPSSDRYVHTSADTAGRQEGLLWYKDNGQHINGEFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHSVRYLSVYNSTGLQHSVIN
****LMNFLRACWRPSSDRYVHTSADTAGRQEGLLWYKDNGQHINGEFSMAVVQANNLL***************SGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGI***************QIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPIL*******AHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHSVRYLSVYNST********
***RLMNFLRAC**************************DNGQHINGEFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLV**********AAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQN**************GLQHSVI*
MLSRLMNFLRACWRPSSDRYVHTSADTAGRQEGLLWYKDNGQHINGEFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHSVRYLSVYNSTGLQHSVIN
MLSRLMNFLRACWRPS****************GLLWYKDNGQHINGEFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHSVRYLSVYNSTGLQHSVIN
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MLSRLMNFLRACWRPSSDRYVHTSADTAGRQEGLLWYKDNGQHINGEFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHSVRYLSVYNSTGLQHSVIN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query326 2.2.26 [Sep-21-2011]
Q5Z8P0392 Probable protein phosphat yes no 0.938 0.780 0.794 1e-149
Q9SD12379 Probable protein phosphat yes no 0.938 0.807 0.785 1e-144
Q9FKX4385 Probable protein phosphat no no 0.938 0.794 0.745 1e-137
Q10S32399 Probable protein phosphat no no 0.944 0.771 0.721 1e-136
Q5PNS9400 Probable protein phosphat no no 0.938 0.765 0.709 1e-135
Q7XCJ7393 Probable protein phosphat no no 0.944 0.783 0.693 1e-131
Q9LHJ9385 Probable protein phosphat no no 0.932 0.789 0.641 1e-120
Q94CL8384 Probable protein phosphat no no 0.911 0.773 0.635 1e-114
Q501F9370 Probable protein phosphat no no 0.904 0.797 0.581 1e-100
Q0V7V2384 Probable protein phosphat no no 0.917 0.778 0.5 2e-91
>sp|Q5Z8P0|P2C60_ORYSJ Probable protein phosphatase 2C 60 OS=Oryza sativa subsp. japonica GN=Os06g0717800 PE=2 SV=1 Back     alignment and function desciption
 Score =  526 bits (1356), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 243/306 (79%), Positives = 272/306 (88%)

Query: 1   MLSRLMNFLRACWRPSSDRYVHTSADTAGRQEGLLWYKDNGQHINGEFSMAVVQANNLLE 60
           M+  LMN LRACWRPSS+++    +D AGRQ+GLLWYKD GQH+NGEFSMAVVQANNLLE
Sbjct: 1   MIVTLMNLLRACWRPSSNQHARAGSDVAGRQDGLLWYKDTGQHVNGEFSMAVVQANNLLE 60

Query: 61  DQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVI 120
           DQ QIESGPLS L+SGPYGTF+G+YDGHGGPET+ YINDHLF HLKRF SEQ S+S DV+
Sbjct: 61  DQCQIESGPLSFLDSGPYGTFVGVYDGHGGPETACYINDHLFHHLKRFASEQNSISADVL 120

Query: 121 KKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKA 180
           KKAY+ATEDGFFS+VTKQWP+KPQIAAVGSCCLVGVI  G LY+AN+GDSR VLGR VKA
Sbjct: 121 KKAYEATEDGFFSVVTKQWPVKPQIAAVGSCCLVGVICGGILYVANVGDSRVVLGRHVKA 180

Query: 181 TGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLK 240
           TGEVLA+QLS+EHNV IESVR+E+ SMHP+D  IVVLKHNVWRVKGLIQV RSIGD YLK
Sbjct: 181 TGEVLAVQLSAEHNVSIESVRKELQSMHPEDRHIVVLKHNVWRVKGLIQVCRSIGDAYLK 240

Query: 241 KAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVD 300
           ++E+NREPLYAKFRLREPF KPILSSEPSIS   LQP DQFLIFASDGLWEHL+NQ+AVD
Sbjct: 241 RSEFNREPLYAKFRLREPFHKPILSSEPSISVQPLQPHDQFLIFASDGLWEHLTNQEAVD 300

Query: 301 IVQNHP 306
           IV + P
Sbjct: 301 IVHSSP 306

Oryza sativa subsp. japonica (taxid: 39947)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9SD12|P2C46_ARATH Probable protein phosphatase 2C 46 OS=Arabidopsis thaliana GN=At3g51370 PE=2 SV=1 Back     alignment and function description
>sp|Q9FKX4|P2C79_ARATH Probable protein phosphatase 2C 79 OS=Arabidopsis thaliana GN=At5g66080 PE=2 SV=1 Back     alignment and function description
>sp|Q10S32|P2C28_ORYSJ Probable protein phosphatase 2C 28 OS=Oryza sativa subsp. japonica GN=Os03g0137200 PE=2 SV=1 Back     alignment and function description
>sp|Q5PNS9|P2C64_ARATH Probable protein phosphatase 2C 64 OS=Arabidopsis thaliana GN=At4g38520 PE=2 SV=1 Back     alignment and function description
>sp|Q7XCJ7|P2C72_ORYSJ Probable protein phosphatase 2C 72 OS=Oryza sativa subsp. japonica GN=Os10g0544900 PE=2 SV=1 Back     alignment and function description
>sp|Q9LHJ9|P2C38_ARATH Probable protein phosphatase 2C 38 OS=Arabidopsis thaliana GN=At3g12620 PE=2 SV=1 Back     alignment and function description
>sp|Q94CL8|P2C48_ARATH Probable protein phosphatase 2C 48 OS=Arabidopsis thaliana GN=PP2C6 PE=2 SV=1 Back     alignment and function description
>sp|Q501F9|P2C67_ARATH Probable protein phosphatase 2C 67 OS=Arabidopsis thaliana GN=At5g02760 PE=2 SV=1 Back     alignment and function description
>sp|Q0V7V2|P2C42_ARATH Probable protein phosphatase 2C 42 OS=Arabidopsis thaliana GN=At3g17090 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query326
224133996397 predicted protein [Populus trichocarpa] 0.938 0.770 0.905 1e-167
255579574395 protein phosphatase 2c, putative [Ricinu 0.938 0.774 0.898 1e-165
255560515397 protein phosphatase 2c, putative [Ricinu 0.938 0.770 0.866 1e-160
224078369397 predicted protein [Populus trichocarpa] 0.944 0.775 0.860 1e-159
224105139397 predicted protein [Populus trichocarpa] 0.944 0.775 0.844 1e-157
359496811397 PREDICTED: LOW QUALITY PROTEIN: probable 0.944 0.775 0.824 1e-154
7768153397 protein phosphatase 2C (PP2C) [Fagus syl 0.944 0.775 0.821 1e-153
4206122396 protein phosphatase 2C homolog [Mesembry 0.941 0.775 0.821 1e-152
225428074397 PREDICTED: probable protein phosphatase 0.938 0.770 0.820 1e-152
449524832397 PREDICTED: LOW QUALITY PROTEIN: probable 0.944 0.775 0.811 1e-152
>gi|224133996|ref|XP_002327730.1| predicted protein [Populus trichocarpa] gi|118486583|gb|ABK95130.1| unknown [Populus trichocarpa] gi|222836815|gb|EEE75208.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  592 bits (1527), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 277/306 (90%), Positives = 293/306 (95%)

Query: 1   MLSRLMNFLRACWRPSSDRYVHTSADTAGRQEGLLWYKDNGQHINGEFSMAVVQANNLLE 60
           MLSRL+NFLRACW PSSDRYVHT ++ AGRQ+GLLWYKD GQH+NGEFSMAVVQANNLLE
Sbjct: 1   MLSRLINFLRACWLPSSDRYVHTGSEAAGRQDGLLWYKDTGQHMNGEFSMAVVQANNLLE 60

Query: 61  DQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVI 120
           DQSQIESGPLSTL+SGPYGTF+GIYDGHGGPETSRY+NDHLFQHLKRFTSEQQSMSVDVI
Sbjct: 61  DQSQIESGPLSTLDSGPYGTFVGIYDGHGGPETSRYVNDHLFQHLKRFTSEQQSMSVDVI 120

Query: 121 KKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKA 180
           +KAYQATE+GF SLVTKQWPMKPQIAAVGSCCLV VI  G LYIANLGDSRAVLGRLVKA
Sbjct: 121 RKAYQATEEGFLSLVTKQWPMKPQIAAVGSCCLVAVICGGILYIANLGDSRAVLGRLVKA 180

Query: 181 TGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLK 240
           TGEVLAIQLSSEHNV IESVRQEMHS+HPDDSQIVVLKHNVWRVKGLIQ+SRSIGDVYLK
Sbjct: 181 TGEVLAIQLSSEHNVAIESVRQEMHSLHPDDSQIVVLKHNVWRVKGLIQISRSIGDVYLK 240

Query: 241 KAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVD 300
           KAE+NR PLYAKFRLREPF++PILSSEPSIS HELQP DQFLIFASDGLWEHLSNQ+AVD
Sbjct: 241 KAEFNRAPLYAKFRLREPFKRPILSSEPSISVHELQPHDQFLIFASDGLWEHLSNQEAVD 300

Query: 301 IVQNHP 306
           IVQNHP
Sbjct: 301 IVQNHP 306

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255579574|ref|XP_002530628.1| protein phosphatase 2c, putative [Ricinus communis] gi|223529801|gb|EEF31736.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255560515|ref|XP_002521272.1| protein phosphatase 2c, putative [Ricinus communis] gi|223539540|gb|EEF41128.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224078369|ref|XP_002305529.1| predicted protein [Populus trichocarpa] gi|222848493|gb|EEE86040.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224105139|ref|XP_002313699.1| predicted protein [Populus trichocarpa] gi|118485969|gb|ABK94829.1| unknown [Populus trichocarpa] gi|222850107|gb|EEE87654.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359496811|ref|XP_003635344.1| PREDICTED: LOW QUALITY PROTEIN: probable protein phosphatase 2C 60-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|7768153|emb|CAB90634.1| protein phosphatase 2C (PP2C) [Fagus sylvatica] Back     alignment and taxonomy information
>gi|4206122|gb|AAD11430.1| protein phosphatase 2C homolog [Mesembryanthemum crystallinum] Back     alignment and taxonomy information
>gi|225428074|ref|XP_002279993.1| PREDICTED: probable protein phosphatase 2C 60 isoform 1 [Vitis vinifera] gi|359475009|ref|XP_003631567.1| PREDICTED: probable protein phosphatase 2C 60 isoform 2 [Vitis vinifera] gi|297744584|emb|CBI37846.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449524832|ref|XP_004169425.1| PREDICTED: LOW QUALITY PROTEIN: probable protein phosphatase 2C 60-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query326
TAIR|locus:2081770379 AT3G51370 [Arabidopsis thalian 0.938 0.807 0.785 2.1e-132
TAIR|locus:2156877385 AT5G66080 [Arabidopsis thalian 0.944 0.8 0.741 9.6e-128
TAIR|locus:2121234400 AT4G38520 [Arabidopsis thalian 0.944 0.77 0.704 2.2e-121
TAIR|locus:2091265385 AT3G12620 [Arabidopsis thalian 0.932 0.789 0.641 3e-108
TAIR|locus:2097238384 AT3G55050 [Arabidopsis thalian 0.911 0.773 0.635 4.1e-104
TAIR|locus:2151256370 AT5G02760 [Arabidopsis thalian 0.901 0.794 0.583 2.7e-91
TAIR|locus:2086097384 AT3G17090 [Arabidopsis thalian 0.846 0.718 0.543 6.2e-85
TAIR|locus:2170234393 AT5G06750 [Arabidopsis thalian 0.871 0.722 0.523 9.7e-80
TAIR|locus:2118899380 AT4G33920 [Arabidopsis thalian 0.880 0.755 0.528 2.3e-78
TAIR|locus:2089293493 AT3G16560 [Arabidopsis thalian 0.558 0.369 0.351 2.8e-27
TAIR|locus:2081770 AT3G51370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1298 (462.0 bits), Expect = 2.1e-132, P = 2.1e-132
 Identities = 242/308 (78%), Positives = 276/308 (89%)

Query:     1 MLSRLMNFLRACWRPSSDRYVHTSADTAGRQEGLLWYKDNGQHINGEFSMAVVQANNLLE 60
             MLS LM  L AC  PSS      S+D+ G+Q+GLLWYKD GQH+ GEFSMAVVQANNLLE
Sbjct:     1 MLSTLMKLLSACLWPSSSS--GKSSDSTGKQDGLLWYKDFGQHLVGEFSMAVVQANNLLE 58

Query:    61 DQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVI 120
             DQSQ+ESGPLSTL+SGPYGTFIGIYDGHGGPETSR++NDHLFQHLKRF +EQ SMSVDVI
Sbjct:    59 DQSQVESGPLSTLDSGPYGTFIGIYDGHGGPETSRFVNDHLFQHLKRFAAEQASMSVDVI 118

Query:   121 KKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKA 180
             KKAY+ATE+GF  +VTKQWP KPQIAAVGSCCLVGVI  G LYIAN+GDSRAVLGR +KA
Sbjct:   119 KKAYEATEEGFLGVVTKQWPTKPQIAAVGSCCLVGVICGGMLYIANVGDSRAVLGRAMKA 178

Query:   181 TGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLK 240
             TGEV+A+QLS+EHNV IESVRQEMHS+HPDDS IV+LKHNVWRVKGLIQ+SRSIGDVYLK
Sbjct:   179 TGEVIALQLSAEHNVSIESVRQEMHSLHPDDSHIVMLKHNVWRVKGLIQISRSIGDVYLK 238

Query:   241 KAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVD 300
             KAE+N+EPLY K+R+REPF++PILS EP+I+ HE+QP D+FLIFASDGLWE +SNQ+AVD
Sbjct:   239 KAEFNKEPLYTKYRIREPFKRPILSGEPTITEHEIQPQDKFLIFASDGLWEQMSNQEAVD 298

Query:   301 IVQNHPHS 308
             IVQNHP +
Sbjct:   299 IVQNHPRN 306
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2156877 AT5G66080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121234 AT4G38520 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091265 AT3G12620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2097238 AT3G55050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151256 AT5G02760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086097 AT3G17090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170234 AT5G06750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118899 AT4G33920 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089293 AT3G16560 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SD12P2C46_ARATH3, ., 1, ., 3, ., 1, 60.78570.93860.8073yesno
Q5Z8P0P2C60_ORYSJ3, ., 1, ., 3, ., 1, 60.79410.93860.7806yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pm.C_570012
SubName- Full=Putative uncharacterized protein; (397 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 2e-53
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 1e-51
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 4e-38
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 5e-17
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 3e-16
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 4e-09
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information 
 Score =  175 bits (445), Expect = 2e-53
 Identities = 75/242 (30%), Positives = 118/242 (48%), Gaps = 47/242 (19%)

Query: 70  LSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKR---FTSEQQSMSVDVIKKAYQA 126
           + T +    G F G++DGHGG E +++++ +L + L        ++     + ++KA+ +
Sbjct: 28  VITPDLSDSGGFFGVFDGHGGSEAAKFLSKNLPEILAEELIKEKDELEDVEEALRKAFLS 87

Query: 127 TEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLA 186
           T++           ++   A  GS  +V +IS   LY+AN+GDSRAVL R  KA      
Sbjct: 88  TDEEI---------LEELEALSGSTAVVALISGNKLYVANVGDSRAVLCRNGKA------ 132

Query: 187 IQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNR 246
           +QL+ +H    E  R  + +                RV G++ +SR+IGD +LK      
Sbjct: 133 VQLTEDHKPSNEDERARIEAAGGFVIN--------GRVNGVLALSRAIGDFFLK------ 178

Query: 247 EPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHP 306
                          P +S+EP ++  EL   D FLI ASDGLW+ LSNQ+ VDIV+ H 
Sbjct: 179 ---------------PYVSAEPDVTVVELTEKDDFLILASDGLWDVLSNQEVVDIVRKHL 223

Query: 307 HS 308
             
Sbjct: 224 SK 225

The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity. Length = 252
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 326
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
KOG0697 379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 99.97
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.96
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.82
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.76
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.74
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.72
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.12
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 98.91
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 96.75
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=1.1e-67  Score=490.33  Aligned_cols=320  Identities=47%  Similarity=0.777  Sum_probs=280.4

Q ss_pred             ChHHHHHHHHHhcCcCccccccc--CCCcC-CCCCCceeecCCCCccccceeeeeeccCcccccceecccCCCccCCC-C
Q 020446            1 MLSRLMNFLRACWRPSSDRYVHT--SADTA-GRQEGLLWYKDNGQHINGEFSMAVVQANNLLEDQSQIESGPLSTLES-G   76 (326)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~w~~~~~~~~~~~~s~~~~~~~~~~ED~~~~~~~~~~~~~~-~   76 (326)
                      |++.++++.+.||+|..+.....  +++.. ...+++.|+++...+..++++++..+.|+.++|+..++.++.+.... .
T Consensus        17 ~~~~~~~~~~s~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~~n~~q~a~~~~~edrv~~~~s~~   96 (390)
T KOG0700|consen   17 MKSTPMRLKRSCLRPIRRGESSSRSGSDSSGNSVDGLLWYKDRSEHSFGDFSMAVLQANNLQEAQGKAEEDRVSVAVSEE   96 (390)
T ss_pred             hccccchhhhhccCCCccccccccccccCCCCCcccccccccccccCcccchhhhhhhhhhhhhcCCcccCcceeeeecc
Confidence            56778899999999988753322  12222 36799999999999999999999999998889998887777655444 6


Q ss_pred             CCeEEEEEecCCCchHHHHHHHHHHHHHHHh------------hhhh--------------------c-ccchHHHHHHH
Q 020446           77 PYGTFIGIYDGHGGPETSRYINDHLFQHLKR------------FTSE--------------------Q-QSMSVDVIKKA  123 (326)
Q Consensus        77 ~~~~l~gV~DGhGG~~aa~~a~~~l~~~l~~------------~~~~--------------------~-~~~~~~~l~~a  123 (326)
                      +++.|+||||||||++|++|++++|+.++..            +..+                    . .....++|.+|
T Consensus        97 ~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~A  176 (390)
T KOG0700|consen   97 NGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSKA  176 (390)
T ss_pred             CCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHHH
Confidence            7789999999999999999999999999882            2222                    1 34567899999


Q ss_pred             HHHHHHHHHHhhhhcCCCCCCcccccceEEEEEEECCEEEEEEecCCeeEEEeeecCCCceEEEeCCCCCCCCCHhHHHH
Q 020446          124 YQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQE  203 (326)
Q Consensus       124 f~~~~~~~~~~~~~~~~~~~~~~~~GsT~~~~~i~~~~l~vanvGDSRavl~~~~~~~~~~~~~~Lt~dH~~~~~~e~~r  203 (326)
                      |.+++++|++.+.+++...|+++.+||||+++++.+..|||||+|||||||++.....+...++|||.||+.++++|++|
T Consensus       177 f~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~R  256 (390)
T KOG0700|consen  177 FEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVRR  256 (390)
T ss_pred             HHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999854444479999999999999999999


Q ss_pred             HHhcCCCCCCeEEEecCccccCCccchhhccccccccccccCCchhhhhhccCCCCCCCcccccCeeEEEEeCCCCeEEE
Q 020446          204 MHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLI  283 (326)
Q Consensus       204 i~~~g~~~~~~~~~~~~~~rv~G~l~vsRaiGd~~~K~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~d~flI  283 (326)
                      |+..||+|+.+++.++  |||+|.|++||||||.++|++.++.+|++++|++|..+++|||+++|+|++++|+|+|+|||
T Consensus       257 ir~eHPdd~~~vv~~~--~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLI  334 (390)
T KOG0700|consen  257 IRSEHPDDPHIVVNKH--WRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLI  334 (390)
T ss_pred             HHHhCCCCcceEeecc--ceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEE
Confidence            9999999999999988  99999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCcccccCHHHHHHHHHc-----CCcCccchhHHHHHHhhh
Q 020446          284 FASDGLWEHLSNQDAVDIVQN-----HPHSVRYLSVYNSTGLQH  322 (326)
Q Consensus       284 LaSDGlwd~ls~~ei~~iv~~-----~~~~~~~~~~i~~~l~~~  322 (326)
                      ||||||||+|||||+|++|.+     .++.+.|-..|..+|...
T Consensus       335 lASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~a  378 (390)
T KOG0700|consen  335 LASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRA  378 (390)
T ss_pred             EeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhh
Confidence            999999999999999999999     666665544444444433

>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 3e-18
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 4e-18
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 6e-17
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 7e-17
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 1e-16
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 8e-15
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 6e-14
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 6e-14
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 6e-14
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 6e-14
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 6e-14
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 7e-14
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 1e-11
1a6q_A 382 Crystal Structure Of The Protein SerineTHREONINE PH 7e-11
3fxj_A 390 Crystal Structure Of Human Protein Phosphatase 1a ( 7e-11
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 7e-10
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 2e-06
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 3e-06
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 5e-05
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure 
Iteration: 1

 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 144 QIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQE 203
           ++A  G+   V  +    L++AN GDSRA+LG + +  G   A+ LS++HN   E   + 
Sbjct: 195 RVAFSGATACVAHVDGVDLHVANTGDSRAMLG-VQEEDGSWSAVTLSNDHNAQNEREVER 253
Query: 204 MHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKA--------EYNREPL----YA 251
           +   HP +    V+K +  R+ GL+   R+ GDV  K +        E   + L    Y 
Sbjct: 254 LKLEHPKNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYT 311
Query: 252 KFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIV 302
           KF     +  P L++EP ++ H L+P D+FL+ A+DGLWE +  QD V IV
Sbjct: 312 KFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 362
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 1e-67
2pnq_A 467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 2e-06
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 8e-65
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 1e-46
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 2e-46
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 9e-46
1a6q_A 382 Phosphatase 2C; catalytic mechanism, metalloenzyme 1e-45
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 5e-45
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 1e-44
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 3e-43
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 1e-41
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 2e-41
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 1e-34
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 9e-28
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 4e-05
3rnr_A211 Stage II sporulation E family protein; structural 2e-04
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 5e-04
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
 Score =  218 bits (555), Expect = 1e-67
 Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 30/288 (10%)

Query: 41  GQHINGEFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDH 100
            + +    +++++    LLE ++ +ESG        P   +    + +   E S+   + 
Sbjct: 85  SERLFYYIAVSLLPHETLLEIENAVESGRALL----PILQWHKHPNDYFSKEASKLYFNG 140

Query: 101 LFQHLKRFTSEQQSMSVDVIKKAY-----------QATEDGFFSLVTKQWPMKPQIAAVG 149
           L  + +         S D+  K              + E       +    +  ++A  G
Sbjct: 141 LRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSG 200

Query: 150 SCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHP 209
           +   V  +    L++AN GDSRA+LG   +  G   A+ LS++HN   E   Q +   HP
Sbjct: 201 ATACVAHVDGVDLHVANTGDSRAMLGVQ-EEDGSWSAVTLSNDHNAQNERELQRLKLEHP 259

Query: 210 DDSQIVVLKHNVWRVKGLIQVSRSIGDVYLK------------KAEYNREPLYAKFRLRE 257
            +    V+K +  R+ GL+   R+ GDV  K              +   +  Y KF    
Sbjct: 260 KNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPN 317

Query: 258 PFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNH 305
               P L++EP ++ H L+P D+FL+ A+DGLWE +  QD V IV  +
Sbjct: 318 YHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEY 365
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query326
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
1a6q_A 382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 99.98
3rnr_A211 Stage II sporulation E family protein; structural 99.97
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.61
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.56
3f79_A255 Probable two-component response regulator; adaptor 99.33
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.23
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 98.39
3eq2_A394 Probable two-component response regulator; adaptor 96.73
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
Probab=100.00  E-value=2e-46  Score=367.54  Aligned_cols=251  Identities=29%  Similarity=0.432  Sum_probs=192.3

Q ss_pred             ceeeeeeccCcccccceecccCCCccCCCCCCeEEEEEecCCCchHHHHHHHHHHHHHHHhhh------hh---------
Q 020446           47 EFSMAVVQANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFT------SE---------  111 (326)
Q Consensus        47 ~~s~~~~~~~~~~ED~~~~~~~~~~~~~~~~~~~l~gV~DGhGG~~aa~~a~~~l~~~l~~~~------~~---------  111 (326)
                      .|.....+.|..|||++.+...      ..+...||||||||||+.+|+|++++|+.+|.+.+      ..         
T Consensus        40 ~~~s~~g~~R~~nED~~~v~~~------~~~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~  113 (467)
T 2pnq_A           40 GFDSNRLPANAPIEDRRSATTC------LQTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGR  113 (467)
T ss_dssp             EEEEEEECCSSSCCEEEEEEEE------SSSSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC---
T ss_pred             EEEeeccCCCCCCCCceeeeec------cCCCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhccc
Confidence            3556678889999999976321      11246899999999999999999999999886431      00         


Q ss_pred             -------------------------------------------cccchHHHHHHHHHHHHHHHHHhhhhcCC------CC
Q 020446          112 -------------------------------------------QQSMSVDVIKKAYQATEDGFFSLVTKQWP------MK  142 (326)
Q Consensus       112 -------------------------------------------~~~~~~~~l~~af~~~~~~~~~~~~~~~~------~~  142 (326)
                                                                 ......++|+++|.++++.|.+.......      ..
T Consensus       114 ~~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~  193 (467)
T 2pnq_A          114 ALLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLV  193 (467)
T ss_dssp             -CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHH
T ss_pred             cccccccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhccccccccccc
Confidence                                                       00146789999999999999876542100      01


Q ss_pred             CCcccccceEEEEEEECCEEEEEEecCCeeEEEeeecCCCceEEEeCCCCCCCCCHhHHHHHHhcCCCCCCeEEEecCcc
Q 020446          143 PQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVW  222 (326)
Q Consensus       143 ~~~~~~GsT~~~~~i~~~~l~vanvGDSRavl~~~~~~~~~~~~~~Lt~dH~~~~~~e~~ri~~~g~~~~~~~~~~~~~~  222 (326)
                      +....+|||+++++|.+++|||||||||||||++. ..+|.+.+.+||.||++.++.|++||.+.||..+...+..+  .
T Consensus       194 ~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~-~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~--~  270 (467)
T 2pnq_A          194 LRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQ-EEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQ--D  270 (467)
T ss_dssp             HHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEE-CTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSS--S
T ss_pred             ccCCCCcceEEEEEEECCEEEEEECCCceEEEEEe-cCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEec--C
Confidence            12356999999999999999999999999999996 22344589999999999999999999999975433222223  3


Q ss_pred             ccCCccchhhccccccccccc----------cCCc--hhhhhhccCCCCCCCcccccCeeEEEEeCCCCeEEEEecCCcc
Q 020446          223 RVKGLIQVSRSIGDVYLKKAE----------YNRE--PLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLW  290 (326)
Q Consensus       223 rv~G~l~vsRaiGd~~~K~~~----------~~~~--~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~d~flILaSDGlw  290 (326)
                      |++|.+++||||||..+|+..          +...  ..+.++..|...++|+|+++|+|..++|+++|+||||||||||
T Consensus       271 Rv~G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLw  350 (467)
T 2pnq_A          271 RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLW  350 (467)
T ss_dssp             SBTTTBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHH
T ss_pred             ccccccccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCcc
Confidence            999999999999999998642          1100  0113445566667899999999999999999999999999999


Q ss_pred             cccCHHHHHHHHHcCC
Q 020446          291 EHLSNQDAVDIVQNHP  306 (326)
Q Consensus       291 d~ls~~ei~~iv~~~~  306 (326)
                      |+|+++||+++|....
T Consensus       351 d~ls~~eiv~iv~~~~  366 (467)
T 2pnq_A          351 ETMHRQDVVRIVGEYL  366 (467)
T ss_dssp             TTSCHHHHHHHHHHHH
T ss_pred             ccCChHHHHHHHHHHH
Confidence            9999999999998764
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 326
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 3e-24
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 7e-11
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.1 bits (243), Expect = 3e-24
 Identities = 53/232 (22%), Positives = 89/232 (38%), Gaps = 30/232 (12%)

Query: 81  FIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWP 140
           F  +YDGH G + ++Y  +HL  H+      + S     ++        GF  +      
Sbjct: 54  FFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRV 113

Query: 141 M---KPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGI 197
           M   K      GS  +  +IS    Y  N GDSR +L R  K          + +H    
Sbjct: 114 MSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRK------VHFFTQDHKPSN 167

Query: 198 ESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLRE 257
              ++ + +              + RV G + VSR++GD   K                 
Sbjct: 168 PLEKERIQNAGG--------SVMIQRVNGSLAVSRALGDFDYKCVHGK------------ 207

Query: 258 PFRKPILSSEPSISAHEL-QPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHS 308
              + ++S EP +   E  +  DQF+I A DG+W+ + N++  D V++    
Sbjct: 208 GPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEV 259
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query326
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-47  Score=353.28  Aligned_cols=239  Identities=23%  Similarity=0.333  Sum_probs=197.4

Q ss_pred             ccCcccccceecccCCCccCCCCCCeEEEEEecCCCchHHHHHHHHHHHHHHHhhhhhcc-------cchHHHHHHHHHH
Q 020446           54 QANNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQ-------SMSVDVIKKAYQA  126 (326)
Q Consensus        54 ~~~~~~ED~~~~~~~~~~~~~~~~~~~l~gV~DGhGG~~aa~~a~~~l~~~l~~~~~~~~-------~~~~~~l~~af~~  126 (326)
                      +.|..|||++.+...   .....+...||||||||||+.+|++++++|++.|.+......       ....++|+++|.+
T Consensus        30 G~R~~~ED~~~~~~~---~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~al~~a~~~  106 (295)
T d1a6qa2          30 GWRVEMEDAHTAVIG---LPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLE  106 (295)
T ss_dssp             ETSSSCCEEEEEEEE---ETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHHHHHHHHHHH
T ss_pred             cCCCcccCeeEEEcc---cCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHH
Confidence            457899999977321   122334568999999999999999999999999976443222       2356788999999


Q ss_pred             HHHHHHHhhhhcCCCCCCcccccceEEEEEEECCEEEEEEecCCeeEEEeeecCCCceEEEeCCCCCCCCCHhHHHHHHh
Q 020446          127 TEDGFFSLVTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQEMHS  206 (326)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~GsT~~~~~i~~~~l~vanvGDSRavl~~~~~~~~~~~~~~Lt~dH~~~~~~e~~ri~~  206 (326)
                      +++.+.......    +....+|||+++++|.++++|||||||||+|+++.      +.+++||.||+|.++.|++||..
T Consensus       107 ~~~~~~~~~~~~----~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~------~~~~~lT~dH~~~~~~E~~Ri~~  176 (295)
T d1a6qa2         107 IDEHMRVMSEKK----HGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRN------RKVHFFTQDHKPSNPLEKERIQN  176 (295)
T ss_dssp             HHHHHHHHHHHT----TCCCCCEECEEEEEECSSEEEEEEESSCEEEEEET------TEEEEECCCCCTTSHHHHHHHHH
T ss_pred             HHHHHhhhhhhc----cCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeec------ccceeeccccCcccHHHHhhHhh
Confidence            998887665543    22366899999999999999999999999999997      88999999999999999999999


Q ss_pred             cCCCCCCeEEEecCccccCCccchhhccccccccccccCCchhhhhhccCCCCCCCcccccCeeEEEEeC-CCCeEEEEe
Q 020446          207 MHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQ-PFDQFLIFA  285 (326)
Q Consensus       207 ~g~~~~~~~~~~~~~~rv~G~l~vsRaiGd~~~K~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~-~~d~flILa  285 (326)
                      .|+    .+.    .+|++|.|++||||||..+|..+.            ..+.+|+|+++|+|..+++. ++|+|||||
T Consensus       177 ~gg----~v~----~~r~~g~l~~tRa~Gd~~~k~~~~------------~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~  236 (295)
T d1a6qa2         177 AGG----SVM----IQRVNGSLAVSRALGDFDYKCVHG------------KGPTEQLVSPEPEVHDIERSEEDDQFIILA  236 (295)
T ss_dssp             TTC----CEE----TTEETTTBSCSBCEECGGGSCCTT------------CCGGGSSSBCCCEEEEEECCTTTEEEEEEE
T ss_pred             cCC----ccc----ccccCCceeeeeccCcHHhhhccc------------cCcccccccccccceEEEeecccceeEeee
Confidence            983    332    248999999999999999987642            12345789999999999986 556899999


Q ss_pred             cCCcccccCHHHHHHHHHcCCcCccchhHHHHHHhhhhhc
Q 020446          286 SDGLWEHLSNQDAVDIVQNHPHSVRYLSVYNSTGLQHSVI  325 (326)
Q Consensus       286 SDGlwd~ls~~ei~~iv~~~~~~~~~~~~i~~~l~~~a~~  325 (326)
                      ||||||+|+++|++++|++....+..++.+|+.|++.|..
T Consensus       237 SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~  276 (295)
T d1a6qa2         237 CDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLY  276 (295)
T ss_dssp             CHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred             cCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHh
Confidence            9999999999999999998877777889999999998864
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure