Citrus Sinensis ID: 020478

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-----

MEEATGNHSISDERVKKEAPQLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQSIVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQKLTSVRVGGNAIEPVNPSANESGEPQKTEDLLKYRPNPDMLVSKTDMTTEDGAGVYKPPKFAPASMDEDKTSRKERNALRKEKETLRQARQSTFMRELVNDLEGRPEEVREVVGVESRELTRYKEMMEERARQEEELFTRAPLTKMEKKKMKHLKKSRNGLLGLTESFYDEIKSLPIEEKDERPTNVSNGSRGMGKLEKRKVYHSN

cccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHcccc

********************QLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQSIVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQKLTSVRVG****************************************************************************************************************************QEEELF*************************L**SFYD************************************

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MEEATGNHSISDERVKKEAPQLAALxxxxxxxxxxxxxxxxxxxxxVKGNNYPTVDGISYLEAKHLLLLNYCQSIVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQKLTSVRVGGNAIEPVNPSANESGEPQKTEDLLKYRPNPDMLVSKTDMTTEDGAGVYKPPKFAPASMDEDKTxxxxxxxxxxxxxxxxxxxxxTFMRELVNDLEGRPEEVREVVGVESRELTRYKEMMEERARQEEELFTRAPLTKMEKKKMKHLKKSRNGLLGLTESFYDEIKSLPIEEKDERPTNVSNGSRGMGKLEKRKVYHSN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Neuroguidin	Involved in the translational repression of cytoplasmic polyadenylation element (CPE)-containing mRNAs.	probable	Q2KII6

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3LVG, chain D
Confidence level:probable
Coverage over the Query: 196-209,222-293
View the alignment between query and template
View the model in PyMOL