Citrus Sinensis ID: 020487

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-----
Protein Sequence
MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP
Secondary Structure (PSIPRED)
cEEEEEccccccccEEEEEccccccccccEEEEEEEEcccHHHHHHHHcccccccccccccccEEEEEEEEEcccccccccccEEEEEEcccccccEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHccccEEEccccccHHHHHHHHHccccccEEEEccccccHHHHHHHHccccEEEEEEccccccccccHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEcEEcHHHHHHHHHHHHccccEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccEEEEEccccccEEEEEcccccccccccEEEEEEEEccccHHHHHHccccccccccccccccEEEEEEEEEcccccccccccEEEEEEcccccEcEEEEEHHHEEEccccccHHHHHHHHHHHHHHHHHHHcccccccccEEEEcccccHHHHHHHHHHHHHccEEEEEEccHHHHHHHHHHcccEEEEcccccHHHHHHHHHccccEEEEEEcccHHHHHHHHccEEEEEEEEEccccccccccEccHHHHHcHcEEEccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEcccccHHHHHHHHHHHHccccEEEEEEcc
Coil and Loop (DISEMBL)
mkaivitqpgspevlqlqevedpqikddEVLIKVEATALNRadtlqrkgsypppkgaspypglecsgtilsvgknvsrwkvGDQVCALlggggyaekvavpagqvlpvpsgvslkdaaafpevACTVWSTVFmtshlspgesflvhggssgiGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFqrnlgslnidgrlfiigtqggakteLNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEknvwpaiavgkvkpvIYKYLPLCEAAEAHQLMESSQHIGKIMLVP
Flexible Loop (DISEMBL)
mkaivitqpgspevlqlqeVEDPQIKDDEVLIKVEATalnradtlqrkgsypppkgaspypGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFvarvkeetggkgvDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVqaaglrsrstenkalivseveknvwpaiavgKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP
Low Complexity Region (SEG)
MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP
Disordered region (IsUnstruct)
*****************************VLIKVEA*************************GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAH****************
Disordered Region (DISOPRED)
MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP
Disordered Region (DISEMBL)
MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP
Disordered Region (DISPRO)
MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	325	2.2.26 [Sep-21-2011]
Q53FA7	332	Quinone oxidoreductase PI	yes	no	0.993	0.972	0.408	4e-65
Q6AYT0	329	Quinone oxidoreductase OS	yes	no	0.975	0.963	0.347	2e-39
P11415	329	Quinone oxidoreductase OS	yes	no	0.978	0.966	0.333	3e-38
O97764	330	Zeta-crystallin OS=Bos ta	no	no	0.975	0.960	0.329	3e-38
P47199	331	Quinone oxidoreductase OS	yes	no	0.963	0.945	0.344	3e-37
Q5R4S7	329	Quinone oxidoreductase OS	no	no	0.975	0.963	0.317	5e-37
Q08257	329	Quinone oxidoreductase OS	no	no	0.975	0.963	0.314	2e-36
Q0MVN8	329	Quinone oxidoreductase OS	no	no	0.975	0.963	0.320	3e-36
P96202	2188	Phthiocerol synthesis pol	no	no	0.969	0.143	0.307	2e-35
Q7TXL8	2188	Phthiocerol/phenolphthioc	no	no	0.969	0.143	0.307	2e-35

>sp|Q53FA7|QORX_HUMAN Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP53I3 PE=1 SV=2

 Score =  248 bits (634), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 134/328 (40%), Positives = 198/328 (60%), Gaps = 5/328 (1%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M A+   +PG PE L ++EV  P   + EVL+KV A+ALNRAD +QR+G Y PP GAS  
Sbjct: 1   MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 60

Query: 61  PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
            GLE SG +  +G      WK+GD   ALL GGG A+ V VP G ++P+P G++L  AAA
Sbjct: 61  LGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 120

Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
            PE   T +  + +  ++  G+  L+H G SG+GT AIQ+ +  G    VTAGS++KL +
Sbjct: 121 IPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM 180

Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
            + LGA    NYK EDF     + T G GV++ILDC+G SY+++N+  L +DGR  + G 
Sbjct: 181 AEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGL 240

Query: 240 QGGAKTELNITS-LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV---GKVKPV 295
            GG      + S L  KR ++  + LRSR  + K ++V+   + + P  +     ++ PV
Sbjct: 241 MGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPV 300

Query: 296 IYKYLPLCEAAEAHQLMESSQHIGKIML 323
           + +  P+ E  EAH+ ME++++IGKI+L
Sbjct: 301 LDRIYPVTEIQEAHKYMEANKNIGKIVL 328

May be involved in the generation of reactive oxygen species (ROS). Has low NADPH-dependent beta-naphthoquinone reductase activity, with a preference for 1,2-beta-naphthoquinone over 1,4-beta-naphthoquinone. Has low NADPH-dependent diamine reductase activity (in vitro).
Homo sapiens (taxid: 9606)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|Q6AYT0|QOR_RAT Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1

 Score =  163 bits (412), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/328 (34%), Positives = 170/328 (51%), Gaps = 11/328 (3%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+AI + + G PEVL+LQ +V  P  +  +VLIKV A  +N  +T  R G+Y   K A P
Sbjct: 8   MRAIRVFEFGGPEVLKLQSDVVVPAPQSHQVLIKVHACGVNPVETYIRSGTYSR-KPALP 66

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
           Y PG + +G I SVG  VS +K GD+V C     GGYAE          P+P  +  +  
Sbjct: 67  YTPGSDVAGIIESVGDGVSAFKKGDRVFCFSTVSGGYAEFALSADNTTYPLPETLDFRQG 126

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
           AA      T    +F ++    GES LVHG S G+G    Q+ +  G++V  TAGSEE  
Sbjct: 127 AALGIPYFTACRALFHSARARAGESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGK 186

Query: 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
            +    GA    N+K  +++ ++K   G KGVDVI++ +       +L  L+  GR+ ++
Sbjct: 187 KLVLQNGAHEVFNHKEANYIDKIKTSAGDKGVDVIIEMLANKNLSNDLKLLSCGGRVIVV 246

Query: 238 GTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIY 297
           G +G    E+N     AK  ++    L S + E       +    +   I  G VKPVI 
Sbjct: 247 GCRG--SIEINPRDTMAKETSIIGVSLFSSTKEE----FQQFAGILQAGIEKGWVKPVIG 300

Query: 298 KYLPLCEAAEAHQ-LMESSQHIGKIMLV 324
              PL +AA+AH+ ++ SS  +GK++L+
Sbjct: 301 SEYPLEKAAQAHEDIIHSSGKMGKMILL 328

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|P11415|QOR_CAVPO Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ PE=1 SV=1

 Score =  159 bits (402), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 168/327 (51%), Gaps = 9/327 (2%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+AI + + G PEVL++Q +V  P  KD +VLIKV A  +N  +T  R G+Y        
Sbjct: 8   MRAIRVFEFGGPEVLKVQSDVAVPIPKDHQVLIKVHACGINPVETYIRSGTYTRIPLLPY 67

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAA 118
            PG + +G + S+G +VS +K GD+V       GGYAE        V  +P  +  +  A
Sbjct: 68  TPGTDVAGVVESIGNDVSAFKKGDRVFTTSTISGGYAEYALASDHTVYRLPEKLDFRQGA 127

Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA 178
           A      T    +F ++    GES LVHG S G+G  A Q+ +  G++V  TAG+EE   
Sbjct: 128 AIGIPYFTACRALFHSARAKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQK 187

Query: 179 VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
           V    GA    N++   ++  +K+  G KGVDVI++ +       +L  L+  GR+ I+G
Sbjct: 188 VVLQNGAHEVFNHRDAHYIDEIKKSIGEKGVDVIIEMLANVNLSNDLKLLSCGGRVIIVG 247

Query: 239 TQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYK 298
            +G    E+N     AK  T+    L S + E      S ++      + +G VKPVI  
Sbjct: 248 CRG--SIEINPRDTMAKESTISGVSLFSSTKEEFQQFASTIQ----AGMELGWVKPVIGS 301

Query: 299 YLPLCEAAEAHQ-LMESSQHIGKIMLV 324
             PL +A++AH+ ++ SS  +GK +L+
Sbjct: 302 QYPLEKASQAHENIIHSSGTVGKTVLL 328

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Cavia porcellus (taxid: 10141)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|O97764|QOR_BOVIN Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2

 Score =  159 bits (401), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 175/328 (53%), Gaps = 11/328 (3%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+AI + + G PEVL+LQ +V  P  KD +VLIKV+A  +N  DT  R G++   K   P
Sbjct: 8   MRAIRVFEFGGPEVLKLQSDVAVPIPKDHQVLIKVQACGVNPVDTYIRSGTHNI-KPLLP 66

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDA 117
           Y PG + +G I +VG++VS +K GD+V       GGYAE        V  +P  +  K  
Sbjct: 67  YTPGFDVAGIIEAVGESVSAFKKGDRVFTTRTISGGYAEYALAADHTVYTLPEKLDFKQG 126

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
           AA      T +  +  ++ + PGES LVHG S G+G  A Q+ +  G++V  TA +EE  
Sbjct: 127 AAIGIPYFTAYRALLHSACVKPGESVLVHGASGGVGIAACQIARAYGLKVLGTASTEEGQ 186

Query: 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
            +  + GA    N+K  D++ ++K+  G KGVDVI++ +       +L  L+  GR+ ++
Sbjct: 187 KIVLENGAHKVFNHKEADYIDKIKKSVGEKGVDVIIEMLANVNLSNDLNLLSHGGRVIVV 246

Query: 238 GTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIY 297
           G++G    E+N      K  +++   L S + E       +    +   + +G ++PVI 
Sbjct: 247 GSRG--TIEINPRDTMTKESSIKGVTLFSSTKEE----FQQFAAALQAGMEIGWLRPVIG 300

Query: 298 KYLPLCEAAEAHQ-LMESSQHIGKIMLV 324
               L +A +AH+ ++ SS   GK++L+
Sbjct: 301 PQYLLEKATQAHENIIHSSGATGKMILL 328

Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding (By similarity). Has minimal or no quinone reductase activity. Binds strongly to single-stranded DNA.

Bos taurus (taxid: 9913)

>sp|P47199|QOR_MOUSE Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=2 SV=1

 Score =  155 bits (393), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/334 (34%), Positives = 173/334 (51%), Gaps = 21/334 (6%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+AI + + G PEVL+LQ +V  P  +  +VLIKV A  +N  +T  R G+Y   K A P
Sbjct: 8   MRAIRVFEFGGPEVLKLQSDVVVPVPQSHQVLIKVHACGVNPVETYIRSGAYSR-KPALP 66

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
           Y PG + +G I SVG  VS +K GD+V C     GGYAE        + P+P  ++ +  
Sbjct: 67  YTPGSDVAGIIESVGDKVSAFKKGDRVFCYSTVSGGYAEFALAADDTIYPLPETLNFRQG 126

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
           AA      T    +F ++    GES LVHG S G+G    Q+ +  G++V  TAGSEE  
Sbjct: 127 AALGIPYFTACRALFHSARARAGESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGK 186

Query: 178 AVCKDLGADVCINYKTEDFVARVKEETG--GKGVDVILDCMGASYFQRNLGSLNIDGRLF 235
            +    GA    N+K  +++ ++K   G   KGVDVI++ +       +L  L+  GR+ 
Sbjct: 187 KLVLQNGAHEVFNHKEANYIDKIKMSVGDKDKGVDVIIEMLANENLSNDLKLLSHGGRVV 246

Query: 236 IIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTEN----KALIVSEVEKNVWPAIAVGK 291
           ++G +G    E+N     AK  ++    L S + E       L+ + +EK        G 
Sbjct: 247 VVGCRG--PIEINPRDTMAKETSIIGVSLSSSTKEEFQQFAGLLQAGIEK--------GW 296

Query: 292 VKPVIYKYLPLCEAAEAHQ-LMESSQHIGKIMLV 324
           VKPVI    PL +AA+AH+ ++  S   GK++L+
Sbjct: 297 VKPVIGSEYPLEKAAQAHEDIIHGSGKTGKMILL 330

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q5R4S7|QOR_PONAB Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=2 SV=1

 Score =  155 bits (391), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 173/328 (52%), Gaps = 11/328 (3%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+A+ + + G PEVL+LQ ++  P  KD + LIKV A  +N  +T  R G+Y   K   P
Sbjct: 8   MRAVRVFEFGGPEVLKLQSDIAVPIPKDHQALIKVHACGVNPVETYIRSGTYSR-KPLLP 66

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
           Y PG + +G I +VG N S +K GD+V  +    GGYAE        V  +P  +  K  
Sbjct: 67  YTPGSDVAGVIEAVGGNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQG 126

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
           AA      T +  +  ++H+  GES LVHG S G+G  A Q+ +  G++V  TAG+EE  
Sbjct: 127 AAIGIPYFTAYRALIHSAHVKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQ 186

Query: 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
            +    GA    N++  +++ ++K+  G KG+DVI++ +      ++L  L+  G++ ++
Sbjct: 187 KIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDVIIEMLANVNLNKDLSLLSHGGQVIVV 246

Query: 238 GTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIY 297
           G++G    E+N     AK  ++    + S + E       +    +   + +G +KPVI 
Sbjct: 247 GSRG--TIEINPRDTMAKESSIIGVTVFSSTKEE----FQQYAAALQAGMEIGWLKPVIG 300

Query: 298 KYLPLCEAAEAHQ-LMESSQHIGKIMLV 324
              PL + AEAH+ ++  S   GK++L+
Sbjct: 301 SQYPLEKVAEAHENIIHGSGATGKMILL 328

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q08257|QOR_HUMAN Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1

 Score =  153 bits (386), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 173/328 (52%), Gaps = 11/328 (3%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+A+ + + G PEVL+L+ ++  P  KD +VLIKV A  +N  +T  R G+Y   K   P
Sbjct: 8   MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR-KPLLP 66

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
           Y PG + +G I +VG N S +K GD+V  +    GGYAE        V  +P  +  K  
Sbjct: 67  YTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQG 126

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
           AA      T +  +  ++ +  GES LVHG S G+G  A Q+ +  G+++  TAG+EE  
Sbjct: 127 AAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ 186

Query: 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
            +    GA    N++  +++ ++K+  G KG+D+I++ +      ++L  L+  GR+ ++
Sbjct: 187 KIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVV 246

Query: 238 GTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIY 297
           G++G    E+N     AK  ++    L S + E       +    +   + +G +KPVI 
Sbjct: 247 GSRG--TIEINPRDTMAKESSIIGVTLFSSTKEE----FQQYAAALQAGMEIGWLKPVIG 300

Query: 298 KYLPLCEAAEAHQ-LMESSQHIGKIMLV 324
              PL + AEAH+ ++  S   GK++L+
Sbjct: 301 SQYPLEKVAEAHENIIHGSGATGKMILL 328

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species. Enhances the stability of mRNA coding for BCL2. NADPH binding interferes with mRNA binding.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q0MVN8|QOR_PIG Quinone oxidoreductase OS=Sus scrofa GN=CRYZ PE=2 SV=1

 Score =  152 bits (384), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 175/328 (53%), Gaps = 11/328 (3%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M AI + + G PEV++LQ +V  P  KD++VLIKV A  +N  DT  R G++   K   P
Sbjct: 8   MSAIRVFKFGGPEVMKLQSDVAIPIPKDNQVLIKVHACGVNPVDTYIRSGTHNM-KPLLP 66

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDA 117
           Y PGL+ +G + +VG++VS +K GD+V  +    GGYAE        V  +P  +  K  
Sbjct: 67  YTPGLDVAGIVEAVGEHVSSFKKGDRVFTVSTLSGGYAEYALAADDTVYMLPEKLDFKQG 126

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
           AA      T    +  ++ +  GE  L+HG S G+G  A Q+ +  G++V  TAG+EE  
Sbjct: 127 AAIGIPYFTACLALLHSACVKAGEIVLIHGASGGVGIAACQIARAYGLKVLGTAGTEEGQ 186

Query: 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
            +    GA    N++  +++ ++K+  G KG+DVI++ +       +L  L+  GR+ I+
Sbjct: 187 NIVLQNGAHEVFNHREVNYIDKIKKSVGEKGIDVIIEMLANVNLSNDLNLLSHGGRVIIV 246

Query: 238 GTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIY 297
           G++G    E+N      K  +++   L S + E       ++   +   + VG ++PVI 
Sbjct: 247 GSRG--PIEINPRDTMTKGSSIKGVALYSSTKEE----FQQLAAALQAGMEVGWLRPVIG 300

Query: 298 KYLPLCEAAEAHQ-LMESSQHIGKIMLV 324
              PL +AA+AH+ ++ S    GK++L+
Sbjct: 301 PVYPLEKAAQAHEDIIHSRGATGKMILL 328

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|P96202|PPSC_MYCTU Phthiocerol synthesis polyketide synthase type I PpsC OS=Mycobacterium tuberculosis GN=ppsC PE=1 SV=2

 Score =  150 bits (378), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 164/319 (51%), Gaps = 4/319 (1%)

Query: 6    ITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLEC 65
            I QPG  + L + EV+  + + D+V ++V A  LN +D L+  G YP   GA+P  G EC
Sbjct: 1463 IDQPGRLDALNVHEVKRGRPQGDQVEVRVVAAGLNFSDVLKAMGVYPGLDGAAPVIGGEC 1522

Query: 66   SGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125
             G + ++G  V   +VG +V A  G G +   +   A  V+P+P  ++  +AA F     
Sbjct: 1523 VGYVTAIGDEVDGVEVGQRVIAF-GPGTFGTHLGTIADLVVPIPDTLADNEAATFGVAYL 1581

Query: 126  TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 185
            T W ++     LSPGE  L+H  + G+G  A+ + K  G R++ TAGS+ K  +   LG 
Sbjct: 1582 TAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV 1641

Query: 186  DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG-GAK 244
            +   + ++ DF   + E T G GVDV+L+ +     QR +  L   GR   +G +   A 
Sbjct: 1642 EYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYAD 1701

Query: 245  TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCE 304
              L + +L AK  +     L   + + +     ++ +++   +A GK++ +      L +
Sbjct: 1702 ASLGLAAL-AKSASFSVVDL-DLNLKLQPARYRQLLQHILQHVADGKLEVLPVTAFSLHD 1759

Query: 305  AAEAHQLMESSQHIGKIML 323
            AA+A +LM S +H GKI++
Sbjct: 1760 AADAFRLMASGKHTGKIVI 1778

Involved in the elongation of either C22-24 fatty acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol derivatives.

Mycobacterium tuberculosis (taxid: 1773)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q7TXL8|PPSC_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsC OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ppsC PE=1 SV=1

 Score =  150 bits (378), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 164/319 (51%), Gaps = 4/319 (1%)

Query: 6    ITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLEC 65
            I QPG  + L + EV+  + + D+V ++V A  LN +D L+  G YP   GA+P  G EC
Sbjct: 1463 IDQPGRLDALNVHEVKRGRPQGDQVEVRVVAAGLNFSDVLKAMGVYPGLDGAAPVIGGEC 1522

Query: 66   SGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125
             G + ++G  V   +VG +V A  G G +   +   A  V+P+P  ++  +AA F     
Sbjct: 1523 VGYVTAIGDEVDGVEVGQRVIAF-GPGTFGTHLGTIADLVVPIPDTLADNEAATFGVAYL 1581

Query: 126  TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 185
            T W ++     LSPGE  L+H  + G+G  A+ + K  G R++ TAGS+ K  +   LG 
Sbjct: 1582 TAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV 1641

Query: 186  DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG-GAK 244
            +   + ++ DF   + E T G GVDV+L+ +     QR +  L   GR   +G +   A 
Sbjct: 1642 EYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYAD 1701

Query: 245  TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCE 304
              L + +L AK  +     L   + + +     ++ +++   +A GK++ +      L +
Sbjct: 1702 ASLGLAAL-AKSASFSVVDL-DLNLKLQPARYRQLLQHILQHVADGKLEVLPVTAFSLHD 1759

Query: 305  AAEAHQLMESSQHIGKIML 323
            AA+A +LM S +H GKI++
Sbjct: 1760 AADAFRLMASGKHTGKIVI 1778

Involved in the elongation of either C22-24 fatty acids or p-hydroxyphenylalkanoic acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol and phenolphthiocerol derivatives, respectively.

Mycobacterium bovis (taxid: 1765)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	325
224078882	325	predicted protein [Populus trichocarpa]	0.996	0.996	0.851	1e-160
357446363	325	Quinone oxidoreductase PIG3 [Medicago tr	0.996	0.996	0.833	1e-156
449443438	325	PREDICTED: quinone oxidoreductase PIG3-l	1.0	1.0	0.833	1e-156
388523009	325	unknown [Medicago truncatula]	0.996	0.996	0.827	1e-155
147863686	325	hypothetical protein VITISV_008189 [Viti	1.0	1.0	0.806	1e-154
359496322	325	PREDICTED: LOW QUALITY PROTEIN: quinone	1.0	1.0	0.806	1e-153
255560828	325	quinone oxidoreductase, putative [Ricinu	0.996	0.996	0.820	1e-153
358249074	325	uncharacterized protein LOC100813682 [Gl	1.0	1.0	0.815	1e-153
147766549	325	hypothetical protein VITISV_002784 [Viti	1.0	1.0	0.803	1e-153
357446353	325	Quinone oxidoreductase [Medicago truncat	0.996	0.996	0.814	1e-152

>gi|224078882|ref|XP_002305665.1| predicted protein [Populus trichocarpa] gi|222848629|gb|EEE86176.1| predicted protein [Populus trichocarpa]

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 276/324 (85%), Positives = 298/324 (91%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+VIT PG PEVLQLQEVEDPQI +DEVLIKVEATALNRADTLQR+G YPPPKGASPY
Sbjct: 1   MKAVVITTPGGPEVLQLQEVEDPQINEDEVLIKVEATALNRADTLQRQGKYPPPKGASPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PGLECSGTI +VGKNVSRWK+GDQVCALL GGGYAEKVAVPAGQVLPVP GVSLKDAAA 
Sbjct: 61  PGLECSGTIEAVGKNVSRWKIGDQVCALLSGGGYAEKVAVPAGQVLPVPQGVSLKDAAAL 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
           PEVACTVWSTVFM S LS GE+FLVHGGSSGIGTFAIQ+ K QGV+VFVTAGSEEKLAVC
Sbjct: 121 PEVACTVWSTVFMMSRLSAGETFLVHGGSSGIGTFAIQIAKHQGVKVFVTAGSEEKLAVC 180

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           KDLGADVCINYKTEDFVARVKEETGGKGVDVILD +GA YFQ+N+ SLNIDGRLF++G  
Sbjct: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDSVGAPYFQKNVDSLNIDGRLFLLGFM 240

Query: 241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
           GGA T++N+ SLFAKR+TVQAAGLR+R+ ENKA IVSEVEKNVWPAI  GKVKPV+YKYL
Sbjct: 241 GGAVTQVNLASLFAKRITVQAAGLRTRTLENKAEIVSEVEKNVWPAIVAGKVKPVVYKYL 300

Query: 301 PLCEAAEAHQLMESSQHIGKIMLV 324
           PL EAAE H+LMESSQHIGKI+LV
Sbjct: 301 PLSEAAEGHRLMESSQHIGKILLV 324

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446363|ref|XP_003593459.1| Quinone oxidoreductase PIG3 [Medicago truncatula] gi|217072752|gb|ACJ84736.1| unknown [Medicago truncatula] gi|355482507|gb|AES63710.1| Quinone oxidoreductase PIG3 [Medicago truncatula] gi|388520243|gb|AFK48183.1| unknown [Medicago truncatula]

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 270/324 (83%), Positives = 293/324 (90%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAIVIT+PG PEVLQLQEV+DPQIKDDEVLIKV ATALNRADTLQRKG+YPPP+GASPY
Sbjct: 1   MKAIVITKPGEPEVLQLQEVQDPQIKDDEVLIKVHATALNRADTLQRKGAYPPPQGASPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PGLECSG I  VGKNVS+WK+GDQVCALL GGGYAEKVAV  GQVLPVP G+SLKDAA+F
Sbjct: 61  PGLECSGIIEFVGKNVSKWKIGDQVCALLAGGGYAEKVAVAEGQVLPVPPGISLKDAASF 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
           PEVACTVWST+FMTS LS GE+ L+HGGSSGIGTFAIQ+ K  G RVFVTAGSEEKLA C
Sbjct: 121 PEVACTVWSTIFMTSRLSKGETLLIHGGSSGIGTFAIQIAKYLGSRVFVTAGSEEKLAFC 180

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           K +GADV INYKTEDFVARVKEETGG+GVDVILDCMGASY+QRNL SLN DGRLFIIG Q
Sbjct: 181 KSIGADVGINYKTEDFVARVKEETGGQGVDVILDCMGASYYQRNLASLNFDGRLFIIGFQ 240

Query: 241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
           GG  TEL++ +LF KRLTVQAAGLRSRS ENKA+IV+EVEKNVWPAIA GKVKPV+YK  
Sbjct: 241 GGVSTELDLRALFGKRLTVQAAGLRSRSPENKAVIVAEVEKNVWPAIAEGKVKPVVYKSF 300

Query: 301 PLCEAAEAHQLMESSQHIGKIMLV 324
           PL EAAEAH+LMESSQHIGKI+LV
Sbjct: 301 PLSEAAEAHRLMESSQHIGKILLV 324

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443438|ref|XP_004139484.1| PREDICTED: quinone oxidoreductase PIG3-like [Cucumis sativus]

 Score =  556 bits (1432), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 271/325 (83%), Positives = 295/325 (90%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+VI++PG  EVLQLQEV+DP I +DEVLIKVEATALNRADTLQRKG YP PKG+SPY
Sbjct: 1   MKAVVISEPGEAEVLQLQEVDDPIINEDEVLIKVEATALNRADTLQRKGFYPAPKGSSPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
            GLECSG I ++GKNVSRWKVGDQVCALL GGGYAEKVAVPAGQ+LP+P GVSLKDAA+ 
Sbjct: 61  LGLECSGIIQALGKNVSRWKVGDQVCALLSGGGYAEKVAVPAGQLLPIPPGVSLKDAASL 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
           PEVACTVWSTVFMTS LS GE+ LVHGGSSGIGTFAIQ+ K QG +VFVTAGSEEKLAVC
Sbjct: 121 PEVACTVWSTVFMTSRLSRGETLLVHGGSSGIGTFAIQIAKYQGAKVFVTAGSEEKLAVC 180

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           KDLGADVCINYKTEDFVARVKEET GKGVDVILD +GASYFQRNL SLN+DGRLFIIGT 
Sbjct: 181 KDLGADVCINYKTEDFVARVKEETDGKGVDVILDSVGASYFQRNLESLNLDGRLFIIGTM 240

Query: 241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
           GGA T+L+I SLFAKR TVQAAGLR+RS ENKA+IVSEVEK VWPAIA GKVKPVI+KYL
Sbjct: 241 GGAVTQLDIRSLFAKRATVQAAGLRTRSLENKAVIVSEVEKIVWPAIAAGKVKPVIFKYL 300

Query: 301 PLCEAAEAHQLMESSQHIGKIMLVP 325
           PL +AAEAHQLMESS+HIGKI+L P
Sbjct: 301 PLSQAAEAHQLMESSKHIGKILLTP 325

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388523009|gb|AFK49566.1| unknown [Medicago truncatula]

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 268/324 (82%), Positives = 292/324 (90%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAIVIT+PG PEVLQLQEV+DPQIKDDEVLIKV ATALNRADTLQRKG+YPPP+GASPY
Sbjct: 1   MKAIVITKPGEPEVLQLQEVQDPQIKDDEVLIKVHATALNRADTLQRKGAYPPPQGASPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PGLECSG I  VGKNVS+WK+GDQVCALL GGGYAEKVAV  GQVLPVP G+SLKDAA+F
Sbjct: 61  PGLECSGIIEFVGKNVSKWKIGDQVCALLAGGGYAEKVAVAEGQVLPVPPGISLKDAASF 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
           PEVACTVWST+FMTS LS GE+ L+HGGSSGIGTFAIQ+ K  G RVFVTAGSEEKLA C
Sbjct: 121 PEVACTVWSTIFMTSRLSKGETLLIHGGSSGIGTFAIQIAKYLGSRVFVTAGSEEKLAFC 180

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           K +GADV INYKTEDFVARVKEETGG+GVDVILDCMGASY+QRNL SLN DG+LFIIG Q
Sbjct: 181 KSIGADVGINYKTEDFVARVKEETGGQGVDVILDCMGASYYQRNLASLNFDGKLFIIGFQ 240

Query: 241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
           GG  TEL++ +LF KRLTVQAAGLRSRS ENKA+IV+EVEKNVWPAIA GKVKPV+YK  
Sbjct: 241 GGVSTELDLRALFGKRLTVQAAGLRSRSPENKAVIVAEVEKNVWPAIAEGKVKPVVYKSF 300

Query: 301 PLCEAAEAHQLMESSQHIGKIMLV 324
           PL EAAEAH+L ESSQHIGKI+LV
Sbjct: 301 PLSEAAEAHRLKESSQHIGKILLV 324

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147863686|emb|CAN83618.1| hypothetical protein VITISV_008189 [Vitis vinifera]

 Score =  549 bits (1414), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 262/325 (80%), Positives = 292/325 (89%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+VIT PG P+VLQ+QEVE+P+I D+EVLI+VEA+ALNRADTLQRKG +PPPKG+SPY
Sbjct: 1   MKAVVITTPGDPQVLQVQEVENPEIGDNEVLIRVEASALNRADTLQRKGLHPPPKGSSPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PGLECSG I +VGK V RWKVGDQVCALL GGGYAEKV+VPAGQVLPVPSGVSLKDAAA 
Sbjct: 61  PGLECSGIIEAVGKAVVRWKVGDQVCALLAGGGYAEKVSVPAGQVLPVPSGVSLKDAAAI 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
           PEVACTVWSTVFM S L+ GE+FL+HGGSSGIGTFAIQ+ K  G RVFVTAG+EEKLAVC
Sbjct: 121 PEVACTVWSTVFMMSRLTAGETFLIHGGSSGIGTFAIQIAKYIGARVFVTAGNEEKLAVC 180

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           KDLGADVCINYKTEDFVARVKEETGGKGVDVILD +G +YFQRN+ SLN+DGRLFIIG Q
Sbjct: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDNIGGAYFQRNIDSLNVDGRLFIIGFQ 240

Query: 241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
           GG   E+N++ L A+RLTVQAAGLR+RS ENKA IVSEVEKNVWPAI  GKVKPV+YKY 
Sbjct: 241 GGTVAEVNLSGLLARRLTVQAAGLRNRSLENKAAIVSEVEKNVWPAIVAGKVKPVVYKYF 300

Query: 301 PLCEAAEAHQLMESSQHIGKIMLVP 325
           PL EAAEAHQLMESS H+GKI+L+P
Sbjct: 301 PLTEAAEAHQLMESSNHVGKILLIP 325

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496322|ref|XP_002267967.2| PREDICTED: LOW QUALITY PROTEIN: quinone oxidoreductase PIG3 [Vitis vinifera]

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 262/325 (80%), Positives = 292/325 (89%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+VIT PG P+VLQ+QEVE+P+I D+EVLI+VEA+ALNRADTLQRKG +PPPKG+SPY
Sbjct: 1   MKAVVITTPGDPQVLQVQEVENPEIGDNEVLIRVEASALNRADTLQRKGLHPPPKGSSPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PGLECSG I +VGK V RWKVGDQVCALL GGGYAEKV+VPAGQVLPVPSGVSLKDAAA 
Sbjct: 61  PGLECSGIIEAVGKAVVRWKVGDQVCALLAGGGYAEKVSVPAGQVLPVPSGVSLKDAAAI 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
           PEVACTVWSTVFM S L+ GE+FL+HGGSSGIGTFAIQ+ K  G RVFVTA +EEKLAVC
Sbjct: 121 PEVACTVWSTVFMMSRLTAGETFLIHGGSSGIGTFAIQIAKYIGARVFVTAXNEEKLAVC 180

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           KDLGADVCINYKTEDFVARVKEETGGKGVDVILD +G +YFQRN+ SLN+DGRLFIIG Q
Sbjct: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDNIGGAYFQRNIDSLNVDGRLFIIGFQ 240

Query: 241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
           GG   E+N++ L A+RLTVQAAGLR+RS ENKA IVSEVEKNVWPAIA GKVKPV+YKY 
Sbjct: 241 GGTVAEVNLSGLLARRLTVQAAGLRNRSLENKAAIVSEVEKNVWPAIAAGKVKPVVYKYF 300

Query: 301 PLCEAAEAHQLMESSQHIGKIMLVP 325
           PL EAAEAHQLMESS H+GKI+L+P
Sbjct: 301 PLTEAAEAHQLMESSNHVGKILLIP 325

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560828|ref|XP_002521427.1| quinone oxidoreductase, putative [Ricinus communis] gi|223539326|gb|EEF40917.1| quinone oxidoreductase, putative [Ricinus communis]

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 266/324 (82%), Positives = 289/324 (89%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+VIT  G PEVLQLQEVEDPQIKDDEVLIKV ATA+NRADTLQR G +PPPKGASPY
Sbjct: 1   MKAVVITTLGGPEVLQLQEVEDPQIKDDEVLIKVHATAVNRADTLQRLGKHPPPKGASPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PGLECSGTI +VGK VSRWKVGD+VCALL GGGYAEKVAVPAGQVLPVP G+SLKDA AF
Sbjct: 61  PGLECSGTIEAVGKLVSRWKVGDEVCALLSGGGYAEKVAVPAGQVLPVPPGISLKDATAF 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
           PEVACTVWSTVFM S LS GE+FL+HGGSSGIGTFAIQM K QGVRVF+TAGS+EKLA C
Sbjct: 121 PEVACTVWSTVFMMSRLSAGETFLIHGGSSGIGTFAIQMAKYQGVRVFITAGSQEKLAAC 180

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           K+LGADVCINY+TEDFVARVKEET GKGVDVILDCMGASY QRNL SLN+ GRLFIIG  
Sbjct: 181 KELGADVCINYRTEDFVARVKEETNGKGVDVILDCMGASYLQRNLDSLNVGGRLFIIGFM 240

Query: 241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
           GGA  ELN+ SL AKRLT+QAAGLR RS+ENKA IV+EVEKNVWPAI  GK+KPV+Y   
Sbjct: 241 GGAVAELNLASLLAKRLTLQAAGLRGRSSENKADIVNEVEKNVWPAIIEGKMKPVVYTSF 300

Query: 301 PLCEAAEAHQLMESSQHIGKIMLV 324
           PL EAAEAH+L+ESSQHIGKI+L+
Sbjct: 301 PLSEAAEAHRLLESSQHIGKILLL 324

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249074|ref|NP_001240244.1| uncharacterized protein LOC100813682 [Glycine max] gi|255642907|gb|ACU22674.1| unknown [Glycine max]

 Score =  547 bits (1409), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 265/325 (81%), Positives = 289/325 (88%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAIVIT+PG PEVLQL+EVEDP + DDE+LI V AT+LNRADT QRKGSYPPPKGASPY
Sbjct: 1   MKAIVITRPGGPEVLQLEEVEDPLVGDDELLIGVHATSLNRADTFQRKGSYPPPKGASPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
            GLECSGT+LS+GKNVS WK+GDQVCALL GGGYAEKVAVP GQVLPVP+GVSL DAA+F
Sbjct: 61  LGLECSGTVLSLGKNVSSWKIGDQVCALLAGGGYAEKVAVPVGQVLPVPAGVSLTDAASF 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
           PEVACTVWSTVFM S LS GE+ LVHGGSSGIGTFAIQ+ K +G RVFVTAGSEEKLA C
Sbjct: 121 PEVACTVWSTVFMMSRLSQGETLLVHGGSSGIGTFAIQIAKYRGSRVFVTAGSEEKLAFC 180

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           K +GADV INYKTEDFVARVKEETGG+GVDVILDCMGASY+QRNL SLN DGRLFIIG Q
Sbjct: 181 KSIGADVGINYKTEDFVARVKEETGGQGVDVILDCMGASYYQRNLDSLNFDGRLFIIGFQ 240

Query: 241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
           GG  T+ ++  L AKRLTVQ AGLR+RS ENKA+IVSEVEKNVWPAIA GKVKPV+YK  
Sbjct: 241 GGVSTQADLRPLLAKRLTVQGAGLRNRSLENKAVIVSEVEKNVWPAIAEGKVKPVVYKSF 300

Query: 301 PLCEAAEAHQLMESSQHIGKIMLVP 325
           PL EAAEAHQLMESSQHIGKI+L+P
Sbjct: 301 PLSEAAEAHQLMESSQHIGKILLLP 325

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147766549|emb|CAN76421.1| hypothetical protein VITISV_002784 [Vitis vinifera]

 Score =  545 bits (1405), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 261/325 (80%), Positives = 289/325 (88%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+VIT PG P+VLQ+QEVE+P+I D+EVLI+VEATALNRADTLQRKG YP PKG+SPY
Sbjct: 1   MKAVVITTPGDPQVLQVQEVENPEIGDNEVLIRVEATALNRADTLQRKGLYPSPKGSSPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PGLECSG I +VGK V RWKVGDQVCALL GGGYAEKV+VPAGQVLPVPSGVSLKDAA  
Sbjct: 61  PGLECSGIIEAVGKAVVRWKVGDQVCALLAGGGYAEKVSVPAGQVLPVPSGVSLKDAAGI 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
           PEVACTVWSTV M S L+ GE+FL+HGGSSGIGTFAIQ+ K  G RVFVTAG+EEKLAVC
Sbjct: 121 PEVACTVWSTVLMMSRLTAGETFLIHGGSSGIGTFAIQIAKYIGARVFVTAGNEEKLAVC 180

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           KDLGADVCINYKTEDFVARVKEETGGKGVDVILD +G +YFQRN+ SLN+DGRLFIIG Q
Sbjct: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDNIGGAYFQRNIDSLNVDGRLFIIGFQ 240

Query: 241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
           GG   E+N++ L A+RLTVQAAGLR+RS ENKA IVSEVEKNVWPAI  GKVKPV+YKY 
Sbjct: 241 GGTVAEVNLSGLLARRLTVQAAGLRNRSLENKAAIVSEVEKNVWPAIVAGKVKPVVYKYF 300

Query: 301 PLCEAAEAHQLMESSQHIGKIMLVP 325
           PL EAAEAHQLMESS H+GKI+L+P
Sbjct: 301 PLTEAAEAHQLMESSNHVGKILLIP 325

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446353|ref|XP_003593454.1| Quinone oxidoreductase [Medicago truncatula] gi|355482502|gb|AES63705.1| Quinone oxidoreductase [Medicago truncatula]

 Score =  543 bits (1399), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 264/324 (81%), Positives = 290/324 (89%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAIVIT PG PEVLQLQEV+DPQ KD+EVLI+V ATALN ADT+QRKG YP P+GASPY
Sbjct: 1   MKAIVITTPGGPEVLQLQEVQDPQPKDNEVLIRVHATALNSADTVQRKGFYPIPQGASPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PGLECSGTI+ VG NVS+WK+GDQVCALL GGGYAEKVAVP GQVLPVP G+SLKDAA+F
Sbjct: 61  PGLECSGTIVCVGINVSKWKIGDQVCALLAGGGYAEKVAVPEGQVLPVPPGISLKDAASF 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
            EVACTVWST+FMTS LS GE+ LVHGGSSGIGTFAIQ+ K QG +VFVTAGSEEKLA C
Sbjct: 121 TEVACTVWSTIFMTSRLSKGETLLVHGGSSGIGTFAIQIAKYQGSKVFVTAGSEEKLAFC 180

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           K +GADV INYKTEDFVARVKEETGG+GVDVILDCMGASY+QRNL SLN DGRLFIIG Q
Sbjct: 181 KSIGADVGINYKTEDFVARVKEETGGQGVDVILDCMGASYYQRNLASLNFDGRLFIIGFQ 240

Query: 241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
           GG  TE+++ +LF KRLTVQAAGLRSRS ENKA+IV+EVEKNVWPAIA GKVKPV+YK  
Sbjct: 241 GGVSTEVDLRALFGKRLTVQAAGLRSRSPENKAVIVAEVEKNVWPAIAEGKVKPVVYKSF 300

Query: 301 PLCEAAEAHQLMESSQHIGKIMLV 324
           PL EAAEAH+LMESSQHIGKI+LV
Sbjct: 301 PLSEAAEAHRLMESSQHIGKILLV 324

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	325
TAIR|locus:2119682	325	AT4G21580 [Arabidopsis thalian	0.993	0.993	0.773	1.6e-132
UNIPROTKB|P72043	328	Rv3777 "Oxidoreductase" [Mycob	0.984	0.975	0.539	9.9e-87
TIGR_CMR|SPO_0231	327	SPO_0231 "alcohol dehydrogenas	0.984	0.978	0.501	3.1e-76
TIGR_CMR|SO_0640	332	SO_0640 "alcohol dehydrogenase	0.984	0.963	0.437	4.3e-70
UNIPROTKB|F1NUE4	337	TP53I3 "Uncharacterized protei	0.969	0.934	0.434	2.9e-64
UNIPROTKB|Q0VC75	332	TP53I3 "Uncharacterized protei	0.993	0.972	0.411	1e-61
UNIPROTKB|Q53FA7	332	TP53I3 "Quinone oxidoreductase	0.993	0.972	0.411	1.3e-61
UNIPROTKB|E2RR83	332	TP53I3 "Uncharacterized protei	0.993	0.972	0.414	2.7e-61
UNIPROTKB|F1SDJ3	332	TP53I3 "Uncharacterized protei	0.993	0.972	0.405	1.2e-60
TIGR_CMR|GSU_2637	328	GSU_2637 "alcohol dehydrogenas	0.990	0.981	0.414	1.2e-60

TAIR|locus:2119682 AT4G21580 [Arabidopsis thaliana (taxid:3702)]

 Score = 1299 (462.3 bits), Expect = 1.6e-132, P = 1.6e-132
 Identities = 250/323 (77%), Positives = 277/323 (85%)

Query:     1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             MKAIVI++PG PEVLQL++V DP++KDDEVLI+V ATALNRADTLQR G Y PP G+SPY
Sbjct:     1 MKAIVISEPGKPEVLQLRDVADPEVKDDEVLIRVLATALNRADTLQRLGLYNPPPGSSPY 60

Query:    61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
              GLECSGTI SVGK VSRWKVGDQVCALL GGGYAEKV+VPAGQ+ P+P+G+SLKDAAAF
Sbjct:    61 LGLECSGTIESVGKGVSRWKVGDQVCALLSGGGYAEKVSVPAGQIFPIPAGISLKDAAAF 120

Query:   121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
             PEVACTVWSTVFM   LS GESFL+HGGSSGIGTFAIQ+ K  GVRVFVTAGS+EKLA C
Sbjct:   121 PEVACTVWSTVFMMGRLSVGESFLIHGGSSGIGTFAIQIAKHLGVRVFVTAGSDEKLAAC 180

Query:   181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
             K+LGADVCINYKTEDFVA+VK ET GKGVDVILDC+GA Y Q+NL SLN DGRL IIG  
Sbjct:   181 KELGADVCINYKTEDFVAKVKAETDGKGVDVILDCIGAPYLQKNLDSLNFDGRLCIIGLM 240

Query:   241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
             GGA  E+ ++SL  KRLTV  A LR RS ENKA++V EVEKNVWPAI  GKVKPVIYKYL
Sbjct:   241 GGANAEIKLSSLLPKRLTVLGAALRPRSPENKAVVVREVEKNVWPAIEAGKVKPVIYKYL 300

Query:   301 PLCEAAEAHQLMESSQHIGKIML 323
             PL +AAE H LMESS HIGKI+L
Sbjct:   301 PLSQAAEGHSLMESSNHIGKILL 323

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0009610 "response to symbiotic fungus" evidence=RCA

UNIPROTKB|P72043 Rv3777 "Oxidoreductase" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
 Identities = 176/326 (53%), Positives = 219/326 (67%)

Query:     1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             M+A+V     S + L  QEV D      EVLIKV A+ +NRAD LQ  G YPPP G S  
Sbjct:     4 MRAVVAE---SSDRLVWQEVPDVSAGPGEVLIKVAASGVNRADVLQAAGKYPPPPGVSDI 60

Query:    61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
              GLE SG + +VG  V+ W  G +VCALL GGGYAE VAVPA QVLP+P  V+L D+AA 
Sbjct:    61 IGLEVSGIVAAVGPGVTEWSAGQEVCALLAGGGYAEYVAVPADQVLPIPPSVNLVDSAAL 120

Query:   121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
             PEVACTVWS + MT+HL PG+  L+HGG+SGIG+ AIQ+ +    RV +TAGS EKL +C
Sbjct:   121 PEVACTVWSNLVMTAHLRPGQLVLIHGGASGIGSHAIQVVRALAARVAITAGSPEKLELC 180

Query:   181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
             +DLGA + INY+ EDFVAR+K+ET G G D+ILD MGASY  RN+ +L  DG+L +IG Q
Sbjct:   181 RDLGAQITINYRDEDFVARLKQETDGSGADIILDIMGASYLDRNIDALATDGQLIVIGMQ 240

Query:   241 GGAKTELNITSLFAKRLTVQAAGLRSRSTEN---KALIVSEVEKNVWPAIAVGKVKPVIY 297
             GG K ELN+  L  KR  V    LR+R       KA I   V  +VWP IA  +V+PVI 
Sbjct:   241 GGVKAELNLGKLLTKRARVIGTTLRARPVSGPHGKAAIAQAVAASVWPMIAANRVRPVIG 300

Query:   298 KYLPLCEAAEAHQLMESSQHIGKIML 323
               LP+ +AA+AH+LM S +  GKI+L
Sbjct:   301 TRLPIQQAAQAHELMLSGKTFGKILL 326

GO:0005886 "plasma membrane" evidence=IDA

TIGR_CMR|SPO_0231 SPO_0231 "alcohol dehydrogenase, zinc-containing" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
 Identities = 162/323 (50%), Positives = 204/323 (63%)

Query:     1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             M+A+ I++PG PEVLQL +   P+    +VLIKV    +NR D LQR G+Y PP GAS  
Sbjct:     5 MRAVEISRPGGPEVLQLTQRPRPEPGHGQVLIKVAYAGVNRPDALQRAGAYDPPPGASDL 64

Query:    61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
             PGLECSG +++VG       VGD+VCALL GGGYA+ V  PA   LPVP G++L++AA  
Sbjct:    65 PGLECSGEVVAVGPGAEDVAVGDKVCALLPGGGYADYVVTPAAHCLPVPQGMALREAACL 124

Query:   121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
             PE   TVWS VF    L  GE FLVHGGSSGIGT AIQ+    G RVF TAGS++K   C
Sbjct:   125 PETFFTVWSNVFTRGGLKAGERFLVHGGSSGIGTTAIQLAHAFGARVFATAGSDDKCRAC 184

Query:   181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
              DLGA+  INY+ EDFV  ++ E GG   D+ILD +G  Y  RN+ +L  DGRL  I   
Sbjct:   185 LDLGAERAINYRDEDFVKVMRSE-GG--ADLILDMVGGDYIPRNVKALAEDGRLVQIAFL 241

Query:   241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
              G   ELN   +  KRLT+  + LR +S   KA I  ++ + VWP +  G++ PV+    
Sbjct:   242 QGPVVELNFALMMVKRLTLTGSTLRPQSDLAKADIARDLREAVWPLLDAGRIAPVMDSEF 301

Query:   301 PLCEAAEAHQLMESSQHIGKIML 323
              L +AA AH  MESS HIGKI+L
Sbjct:   302 DLGDAAAAHARMESSGHIGKIVL 324

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

TIGR_CMR|SO_0640 SO_0640 "alcohol dehydrogenase, zinc-containing" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
 Identities = 140/320 (43%), Positives = 197/320 (61%)

Query:     4 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGL 63
             I I QPG+PEV+QL     P +   +VLI+V A  +N  D  QR G+YPPP GAS   GL
Sbjct:    11 IHIEQPGAPEVMQLSRSSLPVVGAGQVLIRVSAAGVNGPDLKQRAGAYPPPPGASLILGL 70

Query:    64 ECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEV 123
             E +G I ++G+ V++W++GD+VCAL+ GGGY E     A   LP+P G S+  AAA PE 
Sbjct:    71 EVAGEICALGEGVTQWQLGDKVCALVPGGGYGEYTLTYAAHCLPIPKGFSMVQAAALPET 130

Query:   124 ACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL 183
               TVW  +FM + L  GE+ L+HGGS GIG+ AI +    G +V  T G +EK   C  L
Sbjct:   131 FFTVWGNLFMRAGLKAGETVLIHGGSGGIGSTAIALANRLGAKVIATTGQDEKRDYCLGL 190

Query:   184 GADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA 243
             GAD+ +NY +++FV  V   T GKGV+V+ D  G  +   NL SL +DGR+  + TQ   
Sbjct:   191 GADLVVNYNSQNFVEEVMSFTQGKGVNVVFDIAGGDFINLNLQSLALDGRMVSVSTQRSP 250

Query:   244 KTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLC 303
             K E+NI  L AKR+    + LR ++ E KA I  ++ + VWP +   ++ P I+   PL 
Sbjct:   251 KAEVNILQLMAKRIVWTGSTLRPQTVEAKAEIARQLRERVWPLLDSQQIVPHIFATYPLI 310

Query:   304 EAAEAHQLMESSQHIGKIML 323
             +A +AH+LM+S +H GK++L
Sbjct:   311 DAPKAHRLMQSGEHRGKVVL 330

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

UNIPROTKB|F1NUE4 TP53I3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
 Identities = 139/320 (43%), Positives = 193/320 (60%)

Query:     9 PGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGT 68
             PG PE L ++EV  P   + EVL+KV A+ALNRAD LQR+G YPPPKG+S   GLE +G+
Sbjct:    11 PGGPENLYVKEVMKPHPGEGEVLVKVSASALNRADLLQRRGKYPPPKGSSDILGLEAAGS 70

Query:    69 ILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV 127
             +  +G   + RWK+GD V ALL GGG AE V VP G ++PVP  ++   AAA PE   T 
Sbjct:    71 VAGLGPGCTGRWKIGDAVMALLSGGGQAEYVTVPEGHLMPVPKDMTFIQAAAIPEAWLTA 130

Query:   128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV 187
             +  +     +  GE+ L+H G+SG+G  AIQ+ +       VTAG++EKL    + GA  
Sbjct:   131 FQLLHFVGKIQKGETVLIHAGASGVGMAAIQLVRLANAIPIVTAGTQEKLQATTNAGAAA 190

Query:   188 CINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTEL 247
               NYK EDF  +V   T G GVD+ILDC+G SY+++NL  L  DGR  I G   G +   
Sbjct:   191 GFNYKNEDFSEKVLAFTQGSGVDIILDCVGGSYWEKNLSCLRTDGRWVIYGLLSGGEVHG 250

Query:   248 NITS-LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK---VKPVIYKYLPLC 303
             ++ + L +KR ++  + LRSR  E K  +V    +NV P  + G    ++P +    PL 
Sbjct:   251 DLLARLLSKRGSIHTSLLRSRDKEYKEQLVKAFIENVLPYFSGGASPHLQPFVDSVYPLH 310

Query:   304 EAAEAHQLMESSQHIGKIML 323
             E  EAH+ ME S++IGKI++
Sbjct:   311 EIVEAHRKMEESKNIGKIVI 330

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003960 "NADPH:quinone reductase activity" evidence=IEA

GO:0006739 "NADP metabolic process" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0048038 "quinone binding" evidence=IEA

GO:0070402 "NADPH binding" evidence=IEA

UNIPROTKB|Q0VC75 TP53I3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 135/328 (41%), Positives = 199/328 (60%)

Query:     1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             M A+   +PG PE L L+EV  P   + EVL+KV A+ALNRAD LQR+G Y PP GAS  
Sbjct:     1 MIAVHFDKPGGPENLYLKEVAKPSPGEGEVLLKVAASALNRADLLQRQGQYAPPPGASNI 60

Query:    61 PGLECSGTILSVGKNVSR-WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
              GLE SG +  +G      W+VGD    LL GGG A+ V VPA  ++P+P+G+++  AAA
Sbjct:    61 LGLEASGHVAELGAGCQGPWRVGDPAMVLLSGGGQAQYVTVPAELLMPIPAGLTMCQAAA 120

Query:   120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
              PE   T +  + +  ++  G+S L+H G+SG+GT AIQ+ +  G    VTAGS+EKL +
Sbjct:   121 IPEAWLTAFQLLHLVGNVQAGDSVLIHAGASGVGTAAIQLARMAGATPLVTAGSQEKLQI 180

Query:   180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
              + LGA    NYK EDF     + T G GV++ILDC+G SY+++N+  L +DG   + G 
Sbjct:   181 AEKLGAAAGFNYKEEDFSEATLKLTKGAGVNLILDCIGGSYWEKNVNCLALDGHWVLYGL 240

Query:   240 QGGAKTELNITS-LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV-G--KVKPV 295
              GGA     + S L  KR ++  + LR R  + K ++V    + + P  +  G  ++ PV
Sbjct:   241 LGGAVISGPLFSKLLFKRGSLITSLLRPRDKKYKQMLVKAFTEQILPHFSTEGPQRLLPV 300

Query:   296 IYKYLPLCEAAEAHQLMESSQHIGKIML 323
             + +  P+ E  EAH+ ME+++++GKI+L
Sbjct:   301 LDRVYPVAEIQEAHEYMETNKNVGKIVL 328

GO:0070402 "NADPH binding" evidence=IEA

GO:0048038 "quinone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006739 "NADP metabolic process" evidence=IEA

GO:0003960 "NADPH:quinone reductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q53FA7 TP53I3 "Quinone oxidoreductase PIG3" [Homo sapiens (taxid:9606)]

 Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
 Identities = 135/328 (41%), Positives = 199/328 (60%)

Query:     1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             M A+   +PG PE L ++EV  P   + EVL+KV A+ALNRAD +QR+G Y PP GAS  
Sbjct:     1 MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 60

Query:    61 PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
              GLE SG +  +G      WK+GD   ALL GGG A+ V VP G ++P+P G++L  AAA
Sbjct:    61 LGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 120

Query:   120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
              PE   T +  + +  ++  G+  L+H G SG+GT AIQ+ +  G    VTAGS++KL +
Sbjct:   121 IPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM 180

Query:   180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
              + LGA    NYK EDF     + T G GV++ILDC+G SY+++N+  L +DGR  + G 
Sbjct:   181 AEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGL 240

Query:   240 QGGAKTELNITS-LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV-G--KVKPV 295
              GG      + S L  KR ++  + LRSR  + K ++V+   + + P  +  G  ++ PV
Sbjct:   241 MGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPV 300

Query:   296 IYKYLPLCEAAEAHQLMESSQHIGKIML 323
             + +  P+ E  EAH+ ME++++IGKI+L
Sbjct:   301 LDRIYPVTEIQEAHKYMEANKNIGKIVL 328

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008631 "intrinsic apoptotic signaling pathway in response to oxidative stress" evidence=NAS

GO:0005575 "cellular_component" evidence=ND

GO:0003960 "NADPH:quinone reductase activity" evidence=IDA

GO:0048038 "quinone binding" evidence=IDA

GO:0006739 "NADP metabolic process" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=IPI

UNIPROTKB|E2RR83 TP53I3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
 Identities = 136/328 (41%), Positives = 194/328 (59%)

Query:     1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             M A+   +PG PE L L+EV  P   + EVL+KV A+ALNRAD LQR+G Y PP GAS  
Sbjct:     1 MLAVHFDEPGGPENLYLKEVAKPSPVEGEVLLKVAASALNRADLLQRQGRYAPPPGASSI 60

Query:    61 PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
              GLE SG I  +G      WK+GD    LL GGG A+ V VP   ++P+P+G++L  AAA
Sbjct:    61 LGLEASGHIAELGPACQGHWKIGDPAMVLLPGGGQAQYVTVPEELLMPIPAGLTLSQAAA 120

Query:   120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
              PE   T +  + +  ++  G+S L+H G+SG+GT AIQ+ +  G    VTAGS+ KL +
Sbjct:   121 IPEAWLTAFQLLHLLGNVQAGDSVLIHAGASGVGTAAIQLARMAGAIPLVTAGSQHKLQM 180

Query:   180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
              + LGA    NYK EDF     + T G GV++ILDC+G SY+++N+  L +DGR  + G 
Sbjct:   181 AEKLGAAAGFNYKEEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWILYGL 240

Query:   240 QGGAKTELNITS-LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG---KVKPV 295
              GG      + S L  KR ++    LRSR  + K  +V    +++ P  +     ++ PV
Sbjct:   241 MGGTDISGPLFSKLLFKRGSLITTLLRSRDKKYKQTLVEAFTEHILPHFSTESPQRLLPV 300

Query:   296 IYKYLPLCEAAEAHQLMESSQHIGKIML 323
             + +  P+    EAH  MES+Q++GKI+L
Sbjct:   301 LDRVYPVTAIQEAHAYMESNQNVGKIVL 328

GO:0070402 "NADPH binding" evidence=IEA

GO:0048038 "quinone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006739 "NADP metabolic process" evidence=IEA

GO:0003960 "NADPH:quinone reductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1SDJ3 TP53I3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
 Identities = 133/328 (40%), Positives = 197/328 (60%)

Query:     1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             M A+   +PG PE L L+EV  P   + EVL+KV A+ALNRAD LQR+G Y PP GA   
Sbjct:     1 MLAVHFDKPGGPENLHLKEVAKPSPGEGEVLLKVVASALNRADLLQRQGHYAPPPGACNI 60

Query:    61 PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
              GLE SG ++ +G      WK+GD    LL GGG A+ V VP G ++P+P+G+++  AAA
Sbjct:    61 LGLEASGHVVELGPGCQGHWKIGDPAMVLLPGGGQAQYVTVPEGFLMPIPAGLTMLQAAA 120

Query:   120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
              PE   T +  + +  ++  G+S L+H GSSG+GT AIQ+ +  G    VTAGS+ KL +
Sbjct:   121 IPEAWLTAFQLLHLLGNVQAGDSVLIHAGSSGVGTAAIQLARMAGAIPLVTAGSQHKLQM 180

Query:   180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
              + LGA    NYK EDF     + T G GV++ILDC+G SY+++N+  L +DGR  + G 
Sbjct:   181 AEKLGAAAGFNYKEEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGL 240

Query:   240 QGGAKTELNITS-LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG---KVKPV 295
              GGA     + S L  KR ++  + LRSR  + K ++V    + + P  ++    ++ PV
Sbjct:   241 MGGADVSGPLFSKLLFKRGSLITSLLRSRDKKYKQMLVKSFTEQILPHFSMESPHRLVPV 300

Query:   296 IYKYLPLCEAAEAHQLMESSQHIGKIML 323
             + +   + E   AH  ME+++++GKI+L
Sbjct:   301 LDRVYAMTEIQAAHVYMETNRNMGKIVL 328

GO:0070402 "NADPH binding" evidence=IEA

GO:0048038 "quinone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006739 "NADP metabolic process" evidence=IEA

GO:0003960 "NADPH:quinone reductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

TIGR_CMR|GSU_2637 GSU_2637 "alcohol dehydrogenase, zinc-containing" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
 Identities = 135/326 (41%), Positives = 192/326 (58%)

Query:     1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             MKA+++   G  +VL++ E E P+  + +VL+KV AT++NR D +QR+G YPPP G S  
Sbjct:     1 MKAVLLDGFGGLDVLKVGEAERPKPAEGQVLVKVVATSVNRPDLVQREGKYPPPPGDSEI 60

Query:    61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
              GLE SGTI  +G  V+ W+VGD+V +L+GGGGYAE     A  ++ +P  +S ++AA  
Sbjct:    61 LGLEVSGTIEELGPGVTGWQVGDRVMSLVGGGGYAEYAVAYASHLMRIPESMSFEEAACV 120

Query:   121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKC--QGVRVFVTAGSEEKLA 178
              E   T +  VFM   L    S ++HGG  G+ T  IQ+ K      ++  TA    K+ 
Sbjct:   121 CESYITAFLNVFMIGGLKDNNSVILHGGGGGVNTAGIQLCKALVPNTKIVATA-HPSKID 179

Query:   179 VCKDLGADVCINY-KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
               K LGAD+ +++ +T DF   VKE T  KGVDVILD +GA Y   N+ SL   GRL II
Sbjct:   180 RVKALGADLVVDFTQTPDFSEAVKEFTNKKGVDVILDHVGAKYLAPNMNSLAYAGRLVII 239

Query:   238 GTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIY 297
             G   G K ELN+  +  KR  +  + LRSR  ++K  IV+E  +   P  A   + P+I 
Sbjct:   240 GVISGIKAELNLALMMVKRQQIIGSVLRSRPVKDKGEIVAEFTRTALPKFADRTIVPIIE 299

Query:   298 KYLPLCEAAEAHQLMESSQHIGKIML 323
             K  P+ +  EAH++ME  +H GKI+L
Sbjct:   300 KVFPMDQVVEAHRMMEEDKHFGKIVL 325

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6AYT0	QOR_RAT	1, ., 6, ., 5, ., 5	0.3475	0.9753	0.9635	yes	no
Q53FA7	QORX_HUMAN	1, ., -, ., -, ., -	0.4085	0.9938	0.9728	yes	no
P47199	QOR_MOUSE	1, ., 6, ., 5, ., 5	0.3443	0.9630	0.9456	yes	no
P40783	QOR_SALTY	1, ., 6, ., 5, ., 5	0.3202	0.9661	0.9602	yes	no
P11415	QOR_CAVPO	1, ., 6, ., 5, ., 5	0.3333	0.9784	0.9665	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	1.6.5.5	LOW CONFIDENCE prediction!
3rd Layer	1.6.5	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	grail3.0093007001	hypothetical protein (325 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.28930002	annotation not avaliable (211 aa)	•					•		•	0.493

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	325
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	0.0
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	1e-176
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	1e-117
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	1e-109
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	8e-94
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	4e-92
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	5e-88
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	1e-83
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	1e-77
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	3e-75
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	2e-74
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	6e-73
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	2e-68
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	1e-66
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	3e-61
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	4e-58
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	1e-57
smart00829	287	smart00829, PKS_ER, Enoylreductase	1e-57
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	2e-57
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	5e-57
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	1e-56
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	8e-55
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	9e-55
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	1e-51
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	7e-51
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	2e-48
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	1e-47
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	2e-47
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	1e-43
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	5e-42
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	2e-40
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	3e-39
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	1e-38
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	3e-38
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	8e-38
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	1e-36
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	5e-36
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	9e-36
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	1e-34
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	2e-34
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	3e-34
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	3e-33
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	1e-31
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	2e-31
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	3e-31
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	7e-31
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	1e-29
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	2e-29
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	3e-29
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	3e-28
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	9e-28
cd05281	341	cd05281, TDH, Threonine dehydrogenase	2e-27
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	3e-27
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	3e-27
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	1e-26
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	5e-26
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	1e-25
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	4e-25
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	9e-25
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	4e-24
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	5e-24
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	2e-23
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	2e-23
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	3e-23
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	6e-23
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	9e-23
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	2e-20
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	2e-20
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	3e-20
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	8e-20
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	4e-19
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	3e-18
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	5e-18
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	6e-18
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	1e-17
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	1e-16
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	2e-16
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	4e-16
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	4e-16
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	1e-15
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	2e-15
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	2e-15
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	5e-15
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	5e-15
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	9e-15
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	1e-14
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	6e-14
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	6e-14
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	1e-13
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	1e-13
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	2e-13
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	5e-12
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	2e-11
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	1e-10
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	4e-10
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	5e-10
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	6e-10
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	7e-10
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	1e-09
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	2e-09
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	3e-09
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	6e-09
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	4e-08
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	2e-07
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	2e-07
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	4e-07
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	1e-06
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	1e-06
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	2e-06
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	7e-06
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	1e-05
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	3e-05
cd08238	410	cd08238, sorbose_phosphate_red, L-sorbose-1-phosph	4e-05
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	3e-04
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	6e-04
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	0.001
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	0.001

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score =  540 bits (1394), Expect = 0.0
 Identities = 191/323 (59%), Positives = 232/323 (71%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAIVI +PG PEVL+L EV  P     EVLI+V A  +NRAD LQR+G YPPP GAS  
Sbjct: 1   MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDI 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
            GLE +G +++VG  V+ WKVGD+VCALL GGGYAE V VPAGQ+LPVP G+SL +AAA 
Sbjct: 61  LGLEVAGVVVAVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAAL 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
           PEV  T W  +F    L  GE+ L+HGG+SG+GT AIQ+ K  G RV  TAGSEEKL  C
Sbjct: 121 PEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC 180

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           + LGADV INY+TEDF   VKE TGG+GVDVILD +G  Y  RNL +L  DGRL +IG  
Sbjct: 181 RALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLL 240

Query: 241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
           GGAK EL++  L  KRLT+  + LRSRS E KA + +   ++VWP  A G+++PVI K  
Sbjct: 241 GGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVF 300

Query: 301 PLCEAAEAHQLMESSQHIGKIML 323
           PL EAAEAH+ MES++HIGKI+L
Sbjct: 301 PLEEAAEAHRRMESNEHIGKIVL 323

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score =  491 bits (1266), Expect = e-176
 Identities = 195/324 (60%), Positives = 236/324 (72%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAI IT+PG PEVL L EV  P  K  EVLI+V A  +NR D LQR G YPPP GAS  
Sbjct: 1   MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDI 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
            GLE +G +++VG+ VSRWKVGD+VCAL+ GGGYAE VAVPAGQVLPVP G+SL +AAA 
Sbjct: 61  LGLEVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAAL 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
           PE   TVWS +F    L  GE+ L+HGG+SGIGT AIQ+ K  G RVF TAGS+EK A C
Sbjct: 121 PETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC 180

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           + LGAD+ INY+ EDFV  VK ETGGKGVDVILD +G SY  RN+ +L +DGR+  IG Q
Sbjct: 181 EALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQ 240

Query: 241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
           GG K EL++  L AKRLT+  + LR+R    KA I +E+ ++VWP +A G+V+PVI K  
Sbjct: 241 GGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVF 300

Query: 301 PLCEAAEAHQLMESSQHIGKIMLV 324
           PL +AA+AH LMES  HIGKI+L 
Sbjct: 301 PLEDAAQAHALMESGDHIGKIVLT 324

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score =  340 bits (873), Expect = e-117
 Identities = 139/325 (42%), Positives = 199/325 (61%), Gaps = 2/325 (0%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+ +   G  +VL++ E   P  K ++VLIKV A  +NRADTLQR+G YPPP G+S  
Sbjct: 2   MRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEI 61

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
            GLE +G +  VG +V R+K GD+V ALL GGGYAE      G V+ +P G + ++AAA 
Sbjct: 62  LGLEVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAI 121

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
           PE   T W  +     +  G+S L+H G+SG+GT A Q+ +  G    +T  SEEK+  C
Sbjct: 122 PEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC 181

Query: 181 KDLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
           K L A + I Y  E  F  +VK+ TG KGV+++LDC+G SY       L +DG+  + G 
Sbjct: 182 KKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGF 241

Query: 240 QGGAKTE-LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYK 298
            GGAK E  N+  L  KR ++  + LRSRS E KA +V+  E+ V P +  G++KP++ +
Sbjct: 242 MGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDR 301

Query: 299 YLPLCEAAEAHQLMESSQHIGKIML 323
             PL E AEAH  +E +++IGK++L
Sbjct: 302 TYPLEEVAEAHTFLEQNKNIGKVVL 326

Length = 334

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  320 bits (823), Expect = e-109
 Identities = 145/331 (43%), Positives = 201/331 (60%), Gaps = 11/331 (3%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+V+ + G PEVL++ EV +P+    EVL++V+A  +N  D L R+G  PP +     
Sbjct: 1   MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFI 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGG---GGYAEKVAVPAGQVLPVPSGVSLKDA 117
           PG E +G +++VG  V+ +KVGD+V AL G    GGYAE V VPA  ++P+P G+S ++A
Sbjct: 61  PGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEA 120

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
           AA P    T W  +F  + L PGE+ LVHG + G+G+ AIQ+ K  G  V     S EKL
Sbjct: 121 AALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKL 180

Query: 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
            + K+LGAD  INY+ EDFV +V+E TGGKGVDV+LD +G   F  +L +L   GRL  I
Sbjct: 181 ELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSI 240

Query: 238 G-TQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVI 296
           G   GG    LN+  L  KRLT++   L SR  E     ++E    ++  +A GK+KPVI
Sbjct: 241 GALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPE----ALAEALAELFDLLASGKLKPVI 296

Query: 297 YKYLPLCE--AAEAHQLMESSQHIGKIMLVP 325
            +  PL E  AA AH L+E  +  GK++L  
Sbjct: 297 DRVYPLAEAPAAAAHLLLE-RRTTGKVVLKV 326

Length = 326

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  281 bits (721), Expect = 8e-94
 Identities = 126/327 (38%), Positives = 186/327 (56%), Gaps = 9/327 (2%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY---PPPKGA 57
           MKA+V  + G PE L L+EV        EV I+VEA  +N  D L  +G Y   PP    
Sbjct: 1   MKAVVCKELGGPEDLVLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPL--- 57

Query: 58  SPY-PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
            P+ PG E +G + +VG+ V+ +KVGD+V AL G GG+AE+V VPA  V P+P G+S ++
Sbjct: 58  -PFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEE 116

Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176
           AAA P    T +  +   + L PGE+ LV G + G+G  A+Q+ K  G RV   A SEEK
Sbjct: 117 AAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEK 176

Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236
           LA+ + LGAD  I+Y+  D   RVK  TGG+GVDV+ D +G   F+ +L SL   GRL +
Sbjct: 177 LALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLV 236

Query: 237 IGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVI 296
           IG   G   ++    L  K ++V      + +     L+ + + + ++  +A GK++P +
Sbjct: 237 IGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAE-LFDLLAEGKIRPHV 295

Query: 297 YKYLPLCEAAEAHQLMESSQHIGKIML 323
               PL +AAEA + +   +  GK++L
Sbjct: 296 SAVFPLEQAAEALRALADRKATGKVVL 322

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  276 bits (709), Expect = 4e-92
 Identities = 119/327 (36%), Positives = 174/327 (53%), Gaps = 10/327 (3%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY- 60
           KA+ I + G PEVL+ ++V  P+    EVL++  A  +N  DT  R G YP P    P+ 
Sbjct: 1   KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPL---PFV 57

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
            G+E +G + +VG  V+ +KVGD+V      G YAE   VPA +++ +P G+S + AAA 
Sbjct: 58  LGVEGAGVVEAVGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAAL 117

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
                T    +  T  + PG++ LVH  + G+G    Q  K  G  V  T  SEEK  + 
Sbjct: 118 LLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA 177

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           +  GAD  INY+ EDFV RV+E TGG+GVDV+ D +G   F+ +L SL   G L   G  
Sbjct: 178 RAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNA 237

Query: 241 GGAKTELNITSLFAKRLTVQAAGLRS--RSTENKALIVSEVEKNVWPAIAVGKVKPVIYK 298
            G     ++  L    L +    L     + E      +E    ++ A+A GK+K  I K
Sbjct: 238 SGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAE----LFDAVASGKLKVEIGK 293

Query: 299 YLPLCEAAEAHQLMESSQHIGKIMLVP 325
             PL +AA+AH+ +ES +  GK++L+P
Sbjct: 294 RYPLADAAQAHRDLESRKTTGKLLLIP 320

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  266 bits (683), Expect = 5e-88
 Identities = 133/352 (37%), Positives = 199/352 (56%), Gaps = 37/352 (10%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+VI   G PEVL+  ++ +P+   DEVL++V+A ALN  D   R+G           
Sbjct: 1   MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHI 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV---------------------CA---LLG---GGG 93
            G + +G + +VG  V+  K G +V                     CA   +LG    GG
Sbjct: 61  LGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGG 120

Query: 94  YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIG 153
           YAE VAVPA  +LP+P  +S ++AAA P    T W  +   + L PGE+ LVHG  SG+G
Sbjct: 121 YAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVG 180

Query: 154 TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213
           + AIQ+ K  G  V  TAGSE+KL   K+LGAD  I+Y+ EDFV  V+E TG +GVDV++
Sbjct: 181 SAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVDVVV 240

Query: 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA 273
           + +GA+ ++++L SL   GRL   G   G +  +++  +F ++L++  + + +++  ++A
Sbjct: 241 EHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEA 300

Query: 274 LIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325
           L +          +  GK+KPVI    PL EAAEAH+ +ES +  GKI+L P
Sbjct: 301 LRL----------VFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score =  255 bits (653), Expect = 1e-83
 Identities = 119/331 (35%), Positives = 179/331 (54%), Gaps = 12/331 (3%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+AI   + G+P+VL+L ++  P     EVL++V A+ +N  DT  R G+YP      PY
Sbjct: 1   MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGL-PPLPY 59

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSL 114
            PG + +G + +VG+ V   KVGD+V     G     G  AE V VPA Q++P+P GVS 
Sbjct: 60  VPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSF 119

Query: 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174
           +  AA    A T +  +F  +    GE+ LVHGGS  +G  A+Q+ +  G RV  TA S 
Sbjct: 120 EQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSA 179

Query: 175 EKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL 234
           E   + +  GAD   NY+ ED   R+   T G+GVDVI++ +      ++L  L   GR+
Sbjct: 180 EGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRI 239

Query: 235 FIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP 294
            + G+ GG +  + I  L AK  +++   L + + E +A     +       +A G ++P
Sbjct: 240 VVYGS-GGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIA----AGLADGALRP 294

Query: 295 VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325
           VI +  PL EAA AH+ +ES   IGK++L P
Sbjct: 295 VIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  240 bits (614), Expect = 1e-77
 Identities = 117/333 (35%), Positives = 166/333 (49%), Gaps = 13/333 (3%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+   Q G PEVL+++E+  P     EVLI+VEA  LNRAD + R+G+Y  P      
Sbjct: 1   MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPAR 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVC----ALLG-GGGYAEKVAVPAGQVLPVPSGVSLK 115
            G E +G + +VG  V+ + VGD+V     A LG  G YAE   VPA  V+ +P G+S  
Sbjct: 61  LGYEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFV 120

Query: 116 DAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175
           +AAA      T +  +   + L PG+S L+   SS +G  AIQ+    G  V  T  + E
Sbjct: 121 EAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSE 180

Query: 176 KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235
           K      LGA   I    ED VA V   TGGKGVDV+ D +G   F +   +L   G L 
Sbjct: 181 KRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLV 240

Query: 236 IIGTQGGAKTELNITSLFAKRLTVQA---AGLRSRSTENKALIVSEVEKNVWPAIAVGKV 292
           + G   G  T   + +   K LT +      +       +  I   ++      +A G +
Sbjct: 241 VYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILD-----GLASGAL 295

Query: 293 KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325
           KPV+ +  P  +  EAH+ +ES Q IGKI++ P
Sbjct: 296 KPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  234 bits (598), Expect = 3e-75
 Identities = 121/351 (34%), Positives = 184/351 (52%), Gaps = 41/351 (11%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP-PPKGASPY 60
           +A+V+T  G  + L++++   P+    EV ++VEA  LN AD + R+G Y   PK   P+
Sbjct: 1   RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKP--PF 58

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
            PG EC+GT+ +VG+ V  +KVGD+V  L   GGYAE V VPA QV P+P G+S ++AAA
Sbjct: 59  VPGFECAGTVEAVGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAA 118

Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLA 178
           FP    T +  +F   +L PG+S LVH  + G+G  A Q+ K    V V  TA S  K  
Sbjct: 119 FPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHE 177

Query: 179 VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
             K+ G    I+Y+T+D+V  VK+ +  +GVD++LD +G    +++   L   GRL + G
Sbjct: 178 ALKENGVTHVIDYRTQDYVEEVKKIS-PEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYG 236

Query: 239 ----TQGG-------AKTELNITSLFAKRLTVQAAGLRSRSTENKAL------------- 274
                 G        AK   N   +   +L           +ENK++             
Sbjct: 237 AANLVTGEKRSWFKLAKKWWNRPKVDPMKLI----------SENKSVLGFNLGWLFEERE 286

Query: 275 IVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325
           +++EV   +      GK+KP I    P  E  EA + ++S ++IGK++L P
Sbjct: 287 LLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  231 bits (591), Expect = 2e-74
 Identities = 112/328 (34%), Positives = 166/328 (50%), Gaps = 24/328 (7%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+ I + G PEVL+L +V  P+    EVL+KV A  +N  D   R+G        +  
Sbjct: 1   MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLP 60

Query: 61  --PGLECSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLK 115
             PG + +G +++VG  V+ +KVGD+V  +     GG YAE V VPA ++   P+ +S +
Sbjct: 61  LIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFE 120

Query: 116 DAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175
           +AAA P    T W  +F    L  G++ L+HG + G+G+FA+Q+ K +G RV  TA S  
Sbjct: 121 EAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATA-SAA 179

Query: 176 KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235
                + LGAD  I+Y   DF           GVD +LD +G     R+L  +   GRL 
Sbjct: 180 NADFLRSLGADEVIDYTKGDFE----RAAAPGGVDAVLDTVGGETLARSLALVKPGGRLV 235

Query: 236 IIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV 295
            I     A+       + A  + V+  G      E  A +   VE         GK++PV
Sbjct: 236 SIAGPPPAEQAAKRRGVRAGFVFVEPDG------EQLAELAELVEA--------GKLRPV 281

Query: 296 IYKYLPLCEAAEAHQLMESSQHIGKIML 323
           + +  PL +AAEAH+ +ES    GK++L
Sbjct: 282 VDRVFPLEDAAEAHERLESGHARGKVVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  228 bits (583), Expect = 6e-73
 Identities = 111/343 (32%), Positives = 175/343 (51%), Gaps = 33/343 (9%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA  ++  G  + L+L E   P+    EVL++V A +LN  D L   G YPPP      
Sbjct: 1   MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLI 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCAL------------------LGG---GGYAEKVA 99
           P  + +G +++VG+ V+R+KVGD+V                     LGG   G  AE V 
Sbjct: 61  PLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVV 120

Query: 100 VPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM 159
           +P   ++  P  +S ++AA  P    T W+ +F    L PG++ LV G + G+  FA+Q 
Sbjct: 121 LPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQG-TGGVSLFALQF 179

Query: 160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGA 218
            K  G RV  T+ S+EKL   K LGAD  INY+T  D+   V + TGG+GVD +++  G 
Sbjct: 180 AKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGP 239

Query: 219 SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSE 278
               +++ ++   G + +IG   G +  + +  L  K  T++   + SR+ + +A+    
Sbjct: 240 GTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRA-QFEAMNR-- 296

Query: 279 VEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI 321
                  AI   +++PVI +  P  EA EA++ +ES  H GK+
Sbjct: 297 -------AIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKV 332

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  216 bits (553), Expect = 2e-68
 Identities = 108/337 (32%), Positives = 169/337 (50%), Gaps = 27/337 (8%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+V+   G PEV +L+EV  PQ    +VL++V A+ +N  DT  R+G         P 
Sbjct: 1   MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAAR---PPL 57

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGV 112
           P   G + +G + +VG+ V+R++VGD+V    GG     G  AE   V A  +   P+ +
Sbjct: 58  PAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANL 117

Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172
           S+++AAA P V  T W  +   + +  G++ L+HGG+ G+G  A+Q+ K  G RV+ TA 
Sbjct: 118 SMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATAS 177

Query: 173 SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
           S EK A  + LGAD  I Y  E  V  V E TGG+G DV+ D +G      +  ++ + G
Sbjct: 178 S-EKAAFARSLGADP-IIYYRETVVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYG 235

Query: 233 RLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKAL-----IVSEVEKNVWPAI 287
           R+  I          ++  L  +  T             +       I+ E  +     +
Sbjct: 236 RVVSILG----GATHDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAAR----LV 287

Query: 288 AVGKVKPVI-YKYLPLCEAAEAHQLMESSQHIGKIML 323
             G+++P++  +  PL EAA AH  +ES    GKI++
Sbjct: 288 ERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVI 324

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  211 bits (540), Expect = 1e-66
 Identities = 115/332 (34%), Positives = 164/332 (49%), Gaps = 29/332 (8%)

Query: 4   IVITQPGSPEVLQLQEVED--PQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASP 59
           +V T+ GSPEVL L EVE   P  K  EVL+KV A ++N  D   R+G       +   P
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKD 116
            PG++ +G +++VG  V+R+KVGD+V   L   GGG  AE V  P   +   P GVS ++
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEE 120

Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176
           AAA P    T    +     + PG+  L++G S G+GTFA+Q+ K  G  V     S   
Sbjct: 121 AAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVC-STRN 179

Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF--QRNLGSLNIDGRL 234
             + + LGAD  I+Y TEDFVA      GG+  DVI D +G S F   R   +L   GR 
Sbjct: 180 AELVRSLGADEVIDYTTEDFVA---LTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRY 236

Query: 235 FIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV-----WPAIAV 289
             +   GG  + L +  L          G   R    K  +     +++        +  
Sbjct: 237 VSV---GGGPSGLLLVLLLLPLT---LGGGGRRL---KFFLAKPNAEDLEQLAEL--VEE 285

Query: 290 GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI 321
           GK+KPVI    PL +A EA++ ++S +  GK+
Sbjct: 286 GKLKPVIDSVYPLEDAPEAYRRLKSGRARGKV 317

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score =  197 bits (502), Expect = 3e-61
 Identities = 95/298 (31%), Positives = 144/298 (48%), Gaps = 7/298 (2%)

Query: 28  DEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCA 87
           DEV ++V+A  LN  D L   G  P         GLECSG +  VG  V+  KVGD+V  
Sbjct: 1   DEVEVEVKAAGLNFRDVLVALGLLPGD---ETPLGLECSGIVTRVGSGVTGLKVGDRVMG 57

Query: 88  LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
           L   G +A  V V A  V+ +P  +S ++AA  P    T +  +   + L  GES L+H 
Sbjct: 58  L-APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHA 116

Query: 148 GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINY-KTEDFVARVKEETG 205
            + G+G  AIQ+ +  G  VF T GSEEK    ++LG  V  I   +   F   +   TG
Sbjct: 117 AAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPVDHIFSSRDLSFADGILRATG 176

Query: 206 GKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLR 265
           G+GVDV+L+ +     + +   L   GR   IG +            F + ++  +  L 
Sbjct: 177 GRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLD 236

Query: 266 SRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323
             + E   L+  E+ + V   +  G +KP+    +P     +A +LM+S +HIGK++L
Sbjct: 237 QLARERPELL-RELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score =  189 bits (482), Expect = 4e-58
 Identities = 101/330 (30%), Positives = 157/330 (47%), Gaps = 16/330 (4%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAIVI QPG PEVL+L+E+  P+ K   VLI+V+A  LNR++   R+G  P  K     
Sbjct: 1   MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFP-RV 59

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGG------GGYAEKVAVPAGQVLPVPSGVSL 114
            G+E  G +         +  G +V   +GG      G YAE   VP  QV  + S +S 
Sbjct: 60  LGIEAVGEVEEAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSW 117

Query: 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174
            + AA PE   T W ++F +  L PG++ L+ GG+S +G  A+++ K  G  V  T  S 
Sbjct: 118 AELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSP 177

Query: 175 EKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL 234
           E+ A+ K+LGAD  +         +++      G D +L+ +G +  + +L  L   G +
Sbjct: 178 ERAALLKELGADEVV-IDDGAIAEQLRAA--PGGFDKVLELVGTATLKDSLRHLRPGGIV 234

Query: 235 FIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP 294
            + G  GG  T  +   +      V      S S +     + E+       +A G +  
Sbjct: 235 CMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFD----FVAAGHLDI 290

Query: 295 VIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324
              K     E  EAH  MES++  GK++++
Sbjct: 291 PPSKVFTFDEIVEAHAYMESNRAFGKVVVL 320

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  188 bits (480), Expect = 1e-57
 Identities = 110/329 (33%), Positives = 167/329 (50%), Gaps = 16/329 (4%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ +PG+   L L+E+E P     EVL+KV A  LN  D        P      P+
Sbjct: 1   MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWS--YPH 58

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
            PG++ +G +++VG  V+ WKVGD+V    +L  GG +AE   V A  VLP+P  +S ++
Sbjct: 59  VPGVDGAGVVVAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEE 118

Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176
           AAA P    T +  +F    +  G + L+ GG+ G+G+FA+Q+ K  G+RV  T  S+  
Sbjct: 119 AAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRN 177

Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236
               K LGAD  I+Y  ED   R+KE TGG+GVD +LD +G         +L  +G L  
Sbjct: 178 FEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVC 237

Query: 237 IGTQGGAKTELNITSLFAKRLTVQ----AAGLRSRSTENKALIVSEVEKNVWPAIAVGKV 292
           I  QG    + +    F + L+V      A            +    E+ +   +A GK+
Sbjct: 238 I--QGR--PDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEE-LLELLAAGKL 292

Query: 293 KPVIYKYLPLCEAAEAHQLMESSQHIGKI 321
           +P++ + LP  +  EA + ++     GKI
Sbjct: 293 EPLVIEVLPFEQLPEALRALKDRHTRGKI 321

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score =  187 bits (477), Expect = 1e-57
 Identities = 95/299 (31%), Positives = 141/299 (47%), Gaps = 19/299 (6%)

Query: 32  IKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG 91
           I+V A  LN  D L   G YP         G EC+G +  VG  V+   VGD+V  L   
Sbjct: 1   IEVRAAGLNFRDVLIALGLYPGEAV----LGGECAGVVTRVGPGVTGLAVGDRVMGL-AP 55

Query: 92  GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
           G +A +V   A  V+P+P G S ++AA  P V  T +  +   + L PGES L+H  + G
Sbjct: 56  GAFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGG 115

Query: 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG--ADVCINYKTEDFVARVKEETGGKGV 209
           +G  AIQ+ +  G  VF TAGS EK    + LG   D   + +   F   +   TGG+GV
Sbjct: 116 VGQAAIQLARHLGAEVFATAGSPEKRDFLRALGIPDDHIFSSRDLSFADEILRATGGRGV 175

Query: 210 DVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELN-----ITSLFAKRLTVQAAGL 264
           DV+L+ +   +   +L  L   GR   IG     K ++        + F   ++  A  L
Sbjct: 176 DVVLNSLSGEFLDASLRCLAPGGRFVEIG-----KRDIRDNSQLAMAPFRPNVSYHAVDL 230

Query: 265 RSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323
                E    I  E+   V    A G ++P+     P+ +A +A + M+  +HIGK++L
Sbjct: 231 -DALEEGPDRI-RELLAEVLELFAEGVLRPLPVTVFPISDAEDAFRYMQQGKHIGKVVL 287

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  186 bits (474), Expect = 2e-57
 Identities = 95/270 (35%), Positives = 135/270 (50%), Gaps = 26/270 (9%)

Query: 29  EVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL 88
           EVL++VEA  L   D   R+G YPPP       G E +G ++ VG  V+  KVGD+V  L
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60

Query: 89  LGG-----------------------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125
                                     GG+AE V VPA  ++P+P G+SL++AA  PE   
Sbjct: 61  PNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLA 120

Query: 126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 185
           T +  +     L PG++ LV G   G+G  A Q+ K  G RV VT  S+EKL + K+LGA
Sbjct: 121 TAYHALRRAGVLKPGDTVLVLGAG-GVGLLAAQLAKAAGARVIVTDRSDEKLELAKELGA 179

Query: 186 DVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAK 244
           D  I+YK ED    ++  TGG G DV++D +G      + L  L   GR+ ++G   G  
Sbjct: 180 DHVIDYKEEDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGP 238

Query: 245 TELNITSLFAKRLTVQAAGLRSRSTENKAL 274
              ++  L  K LT+  +   +R    +AL
Sbjct: 239 PLDDLRRLLFKELTIIGSTGGTREDFEEAL 268

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  187 bits (476), Expect = 5e-57
 Identities = 113/352 (32%), Positives = 169/352 (48%), Gaps = 50/352 (14%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA ++ +P  P  LQ++EV DP+    EVLIKV+A  +   D L  KG +P  +G  P 
Sbjct: 1   MKAAILHKPNKP--LQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFP--RGKYPL 56

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQV---------------------C---ALLGG---G 92
             G E  GT+  VG+ V R+K GD+V                     C   A  G    G
Sbjct: 57  ILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDG 116

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
           G+AE V VP   ++ +P  VS + AA    V  T    +     +  G++ LV G   G+
Sbjct: 117 GFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKRAG-VKKGDTVLVTGAGGGV 175

Query: 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212
           G  AIQ+ K  G RV     S EKL + K+LGAD  I+     F   VK+     G DV+
Sbjct: 176 GIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVID--GSKFSEDVKKLG---GADVV 230

Query: 213 LDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK 272
           ++ +G+   + +L SLN  GRL +IG        L    L  K + +  +   +++   +
Sbjct: 231 IELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEE 290

Query: 273 AL-IVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323
           AL +V E           GK+KPVI + + L +  EA + ++S + +G+I+L
Sbjct: 291 ALKLVKE-----------GKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVL 331

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score =  185 bits (471), Expect = 1e-56
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 12/309 (3%)

Query: 21  EDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP---GLECSGTILSVGKNVS 77
           E       EV I+V A +LN  D L  +G YP      PYP   G E SG + +VG +V+
Sbjct: 1   EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYP---TMPPYPFTPGFEASGVVRAVGPHVT 57

Query: 78  RWKVGDQVCALLGG--GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS 135
           R  VGD+V A  G   GG+A  V VP  QV+  P+ +S ++A A P V  TV    F  +
Sbjct: 58  RLAVGDEVIAGTGESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDA-FARA 116

Query: 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED 195
            L+ GE  L+   + G G  A+Q+ + +G  ++ TA S++KL   K LG    INY  ED
Sbjct: 117 GLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQLGVPHVINYVEED 176

Query: 196 FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNIT-SLFA 254
           F   +   TGG+GVDV+++ +     Q+ L  L   GR   I      K+  ++  S+ +
Sbjct: 177 FEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMT-ALKSAPSVDLSVLS 235

Query: 255 KRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMES 314
              +  +  LR     +   I     + V   +  G+++P + +  P  +  EA++ +  
Sbjct: 236 NNQSFHSVDLRKLLLLDPEFIADYQAEMV-SLVEEGELRPTVSRIFPFDDIGEAYRYLSD 294

Query: 315 SQHIGKIML 323
            ++IGK+++
Sbjct: 295 RENIGKVVV 303

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  181 bits (461), Expect = 8e-55
 Identities = 103/336 (30%), Positives = 176/336 (52%), Gaps = 17/336 (5%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            + +V+T+ G PEVL++ E + P+    EV++KVEA+ ++ AD   R+G YP        
Sbjct: 1   NREVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFT 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG +  G + ++G  V+ ++VGD+V AL   GG AE + + A  ++PVP GV   +A   
Sbjct: 61  PGYDLVGRVDALGSGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCL 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
                T +  +   + +  G+  L+HG S G+G   +++    G  V+ TA SE   A  
Sbjct: 121 VLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTA-SERNHAAL 179

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG-- 238
           ++LGA   I+Y+T+D++  +       GVDV+ D +G   ++ +  +L   G L   G  
Sbjct: 180 RELGA-TPIDYRTKDWLPAMLTP---GGVDVVFDGVGGESYEESYAALAPGGTLVCYGGN 235

Query: 239 --TQGGAKTELNITSLFAKRLTVQAAGLRSRST-----ENKALIVSEVEKNVW---PAIA 288
                G ++   + SL A+   ++      R+T      ++A       +++      +A
Sbjct: 236 SSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLA 295

Query: 289 VGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324
            GK++P I K LPL E AEAH+L+ES + +GKI+L+
Sbjct: 296 KGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVLL 331

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  181 bits (461), Expect = 9e-55
 Identities = 113/357 (31%), Positives = 163/357 (45%), Gaps = 55/357 (15%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ + G P  L+++EV  P+    EVLIKVEA  +   D    KG +P PK   P 
Sbjct: 4   MKAAVLKKFGQP--LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKL--PL 59

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQV--------------C----------ALLGG---- 91
            PG E  GT++ VG+ V+  KVGD+V              C            + G    
Sbjct: 60  IPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTD 119

Query: 92  GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
           GGYAE V VPA  V+ +P G+ L +AA       T +  +   +++ PG+   V G + G
Sbjct: 120 GGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKK-ANVKPGKWVAVVG-AGG 177

Query: 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV 211
           +G  A+Q  K  G  V     SEEKL + K LGAD  IN    D +  VKE       D 
Sbjct: 178 LGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEI-----ADA 232

Query: 212 ILDCMGASYFQRNLGSLNIDGRLFIIG-TQGGAKTELNITSLFAKRLTVQ--AAGLRSRS 268
           I+D +G +  + +L +L   G L ++G   GG    L    L  K +++     G R+  
Sbjct: 233 IIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADL 292

Query: 269 TENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325
            E                   GK+KP I + +PL E  EA++ ME  +  G+ ++  
Sbjct: 293 EEALDFAAE------------GKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDM 337

Length = 339

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score =  172 bits (439), Expect = 1e-51
 Identities = 109/330 (33%), Positives = 163/330 (49%), Gaps = 11/330 (3%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP-PPKGASP 59
           M+AI + + G PEVL  ++V DP     +V I V A  ++  DT  R G  P P     P
Sbjct: 1   MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELP 60

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQVCALLG--GGGYAEKVAVPAGQVLPVPSGVSLKD 116
           Y PG E +G + +VG  V    +G +V A  G  GGGYAE        + PVP G+ L+ 
Sbjct: 61  YVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEA 120

Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176
           A A      T    +   + L+PG+  LV   + G+G+  +Q+ K  G  V   AG   K
Sbjct: 121 AVAVVHDGRTA-LGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAK 179

Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236
            A+ + LGADV ++Y   D+  +V+E  GG GV V+LD +G +  +  L  L   GR   
Sbjct: 180 TALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLT 239

Query: 237 IGTQGGAKTELNITSLFAKRLTVQ-AAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV 295
            G   G  T L+      + +TV    G+++     +AL    +        A G++ PV
Sbjct: 240 YGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALA-----EAAAGRLVPV 294

Query: 296 IYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325
           + +  PL  AAEAH  +E+   +GK++L+P
Sbjct: 295 VGQTFPLERAAEAHAALEARSTVGKVLLLP 324

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score =  170 bits (434), Expect = 7e-51
 Identities = 98/325 (30%), Positives = 139/325 (42%), Gaps = 6/325 (1%)

Query: 4   IVITQPGSPE--VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASP 59
           +V TQ G P   VL+L  +  P     EVL+++ A  +N +D +   G+Y   PP  A P
Sbjct: 1   VVYTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVP 60

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
             G E  G ++ VG  VS   VG +V  L G G + E V  PA  ++PVP  +S + AA 
Sbjct: 61  --GNEGVGVVVEVGSGVSGLLVGQRVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAM 118

Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
                 T W  +     L PG+  + +  +S +G   IQ+ K  G +       +E++  
Sbjct: 119 LYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEE 178

Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
            K LGAD  I+   ED   RVKE TGG G  + LD +G     R   SL   G L   G 
Sbjct: 179 LKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGL 238

Query: 240 QGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKY 299
             G       +    K +TV+   LR            E    V   +  G +   +   
Sbjct: 239 LSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAK 298

Query: 300 LPLCEAAEAHQLMESSQHIGKIMLV 324
            PL +  EA    E     GK++L 
Sbjct: 299 FPLEDFEEAVAAAEQPGRGGKVLLT 323

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score =  164 bits (417), Expect = 2e-48
 Identities = 112/329 (34%), Positives = 158/329 (48%), Gaps = 9/329 (2%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           K I   + G PEVLQ  E       ++EV ++ +A  +N  DT  R G YPPP   S   
Sbjct: 3   KRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGL- 61

Query: 62  GLECSGTILSVGKNVSRWKVGDQVC-ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           G E +G +  VG  V   KVGD+V  A    G Y+    VPA +   +P  +S + AAA 
Sbjct: 62  GTEAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAAS 121

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
                TV+  +  T  + P E FL H  + G+G  A Q  K  G ++  T GS +K    
Sbjct: 122 FLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA 181

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           K  GA   INY+ E+ V RVKE TGGK V V+ D +G   ++ +L  L   G +   G  
Sbjct: 182 KKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNA 241

Query: 241 GGAKTELNITSLFAK-RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK---PVI 296
            G  T +N+  L  K  L V    L+   T  + L  +E    ++  IA G +K      
Sbjct: 242 SGPVTGVNLGILNQKGSLYVTRPSLQGYITTREEL--TEASNELFSLIASGVIKVDVAEQ 299

Query: 297 YKYLPLCEAAEAHQLMESSQHIGKIMLVP 325
            K+ PL +A  AH+++ES    G  +L+P
Sbjct: 300 QKF-PLKDAQRAHEILESRATQGSSLLIP 327

Length = 327

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  162 bits (413), Expect = 1e-47
 Identities = 79/233 (33%), Positives = 114/233 (48%), Gaps = 23/233 (9%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA V+T PG   ++ + +V  P+   DEVL+KV+A ALN  D   +   + P   A   
Sbjct: 1   QKAAVLTGPGGGLLV-VVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFIPSYPA--I 57

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGG--------GGYAEKVAVPAGQVLPVPSGV 112
            G + +GT++ VG  V+R+KVGD+V   + G        G + E V   A     +P  +
Sbjct: 58  LGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNI 117

Query: 113 SLKDAAAFPEVACTVWSTVFMTSHL----------SPGESFLVHGGSSGIGTFAIQMGKC 162
           S ++AA  P    T    +F    L          S G+  L+ GGSS +GT AIQ+ K 
Sbjct: 118 SFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKL 177

Query: 163 QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215
            G +V  TA S +   + K LGAD   +Y   D V  ++  TGGK +   LDC
Sbjct: 178 AGYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGK-LRYALDC 228

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score =  162 bits (413), Expect = 2e-47
 Identities = 111/362 (30%), Positives = 154/362 (42%), Gaps = 56/362 (15%)

Query: 1   MKAIVITQPGSPEVLQ-LQEVEDPQI-KDDEVLIKVEATALNRADTLQRKG--------- 49
           MKA  I   G  + L  L+    P I K ++VLIKV A ++N  D L R G         
Sbjct: 1   MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKK 60

Query: 50  SYPPPKGASPY-----PGLECSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVP 101
             P     S        G +CSG ++ +G  V  +++GD+V   +     G +AE V VP
Sbjct: 61  RKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVP 120

Query: 102 AGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP----GESFLVHGGSSGIGTFAI 157
             +V   P  +S ++AA+ P    T WS +     L+P    G+  L+ GGS G+GTFAI
Sbjct: 121 ENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAI 180

Query: 158 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217
           Q+ K  G  V  T  S + + + K LGAD  I+Y  EDF   + E       DVILD +G
Sbjct: 181 QLLKAWGAHVTTTC-STDAIPLVKSLGADDVIDYNNEDFEEELTERG---KFDVILDTVG 236

Query: 218 ------ASYFQRNLGSL---------NIDGRLFIIGTQGGAKTELNIT--SLFAKRLTVQ 260
                 A    +  G+          N D    + G    A   L     SL        
Sbjct: 237 GDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRW 296

Query: 261 AAGLRSRST-ENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIG 319
                S S  +  A +V +           GK+KPVI K  P  E  EA++ +ES    G
Sbjct: 297 GFFSPSGSALDELAKLVED-----------GKIKPVIDKVFPFEEVPEAYEKVESGHARG 345

Query: 320 KI 321
           K 
Sbjct: 346 KT 347

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  152 bits (387), Expect = 1e-43
 Identities = 102/369 (27%), Positives = 157/369 (42%), Gaps = 63/369 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVED---PQIKDDEVLIKVEATALNRADTLQRKGSY-----P 52
           M+A+++T  G  +  +L   +D   P     EVLI+V A  +N  D   R+G Y      
Sbjct: 1   MRAVLLTGHGGLD--KLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDG 58

Query: 53  PPKGASPY--------------PGLECSGTILSVGKNVSRWKVGDQV------------- 85
                                  G +  G +++VG+ V   ++G++V             
Sbjct: 59  ATDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDD 118

Query: 86  ---CALLGG---GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST---VFMTSH 136
                 +G    GG+AE   VPA    PV S +S  + A FP      +ST   +   + 
Sbjct: 119 PADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFP----CSYSTAENMLERAG 174

Query: 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF 196
           +  GE+ LV G S G+G+  +Q+ K +G  V   AG   K    + LGAD  I       
Sbjct: 175 VGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAG-AAKEEAVRALGADTVILRDAPLL 233

Query: 197 VARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKR 256
                +  GG+ VDV+ D +G   F   L  L   GR    G   G   EL++ +L+ K 
Sbjct: 234 AD--AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKD 291

Query: 257 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQ 316
           LT+  + L +R          EV + +   I  G+++PV+ K  PL E  EA       +
Sbjct: 292 LTLFGSTLGTR----------EVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKR 341

Query: 317 HIGKIMLVP 325
           H+GK++LVP
Sbjct: 342 HVGKLVLVP 350

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  148 bits (375), Expect = 5e-42
 Identities = 106/364 (29%), Positives = 167/364 (45%), Gaps = 62/364 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQR---KGSYPPPKGA 57
           MKA+V+T PG    L+ +++  P+    EVL+KV+A  +  +D + R    G+Y PP   
Sbjct: 1   MKALVLTGPG---DLRYEDIPKPEPGPGEVLVKVKACGICGSD-IPRYLGTGAYHPPL-- 54

Query: 58  SPYPGLECSGTILSVGKNVSRWKVGDQV---------------------CA---LLGG-- 91
               G E SGT+  VG  V    VGD+V                     C+    +G   
Sbjct: 55  --VLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRR 112

Query: 92  -GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS 150
            G +AE V+VPA  ++ +P  V   + AA  E A      V +   ++ G++ +V G  +
Sbjct: 113 DGAFAEYVSVPARNLIKIPDHVDY-EEAAMIEPAAVALHAVRLA-GITLGDTVVVIGAGT 170

Query: 151 GIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
            IG  AIQ  K  G  RV      +EKLAV ++LGAD  IN K ED V +V+E T G+G 
Sbjct: 171 -IGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED-VEKVRELTEGRGA 228

Query: 210 DVILDCMGASYFQRN-LGSLNIDGRLFIIGTQGG--AKTELNITSLFAKRLTVQAAGLRS 266
           D++++  G+       L      G++ ++G   G    +E     +  K LT+Q +    
Sbjct: 229 DLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSW--- 285

Query: 267 RSTENKALIVSEVEKNVWP----AIAVGK--VKPVIYKYLPLCEAAEAHQLM-ESSQHIG 319
                     +    + W      +A GK  V+P+I   LPL +   A + + +  +  G
Sbjct: 286 ------NSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSG 339

Query: 320 KIML 323
           K++L
Sbjct: 340 KVLL 343

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score =  143 bits (363), Expect = 2e-40
 Identities = 102/353 (28%), Positives = 171/353 (48%), Gaps = 59/353 (16%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD--TLQRKGSYPPPKGAS 58
           MKA+V  + G  E L++++V+DP+    EVLI+V+   +N  D   +      P P    
Sbjct: 1   MKALVFEKSGI-ENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPMPH--- 56

Query: 59  PYPGLECSGTILSVGKNVSRWKVGDQV----------CALL----------GG------- 91
             PG E +G +  VG +V   K GD+V          C +           GG       
Sbjct: 57  -IPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSN 115

Query: 92  GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
           GGYAE + VP   +  +P  +S + AA+ P  A T +  +     L PGE+ +V G S  
Sbjct: 116 GGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKTAG-LGPGETVVVFGASGN 174

Query: 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV 211
            G FA+Q+ K  G  V   +  +      K+ GAD  ++Y  ++   +VKE T  K  DV
Sbjct: 175 TGIFAVQLAKMMGAEVIAVSRKD----WLKEFGADEVVDY--DEVEEKVKEIT--KMADV 226

Query: 212 ILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAA--GLRSRST 269
           +++ +G+S++  +L  L   GRL   GT  G + +L+++ L++K++++  +  G R    
Sbjct: 227 VINSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELL 286

Query: 270 ENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIM 322
           E     + ++ K++       KVK  ++K   L EA EA + + S +  G+I+
Sbjct: 287 E-----LVKIAKDL-------KVK--VWKTFKLEEAKEALKELFSKERDGRIL 325

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  140 bits (354), Expect = 3e-39
 Identities = 101/294 (34%), Positives = 138/294 (46%), Gaps = 42/294 (14%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+V T PG   V +L+EV +P+    EVLIKV A  +  +D    KG Y P +     
Sbjct: 1   MKALVKTGPGPGNV-ELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVE----T 55

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV----------------------CA---LLG-- 90
           P   G E SGTI+ VG +V  WKVGD+V                      C     +G  
Sbjct: 56  PVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQ 115

Query: 91  -GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGS 149
             GG+AE V VP   +  +P  +SL +AAA  E        V   S + PG++ +V  G 
Sbjct: 116 ADGGFAEYVLVPEESLHELPENLSL-EAAALTEPLAVAVHAVAERSGIRPGDTVVVF-GP 173

Query: 150 SGIGTFAIQMGKCQGVRVFVTAGS--EEKLAVCKDLGADVCINYKTEDFVARVKEETGGK 207
             IG  A Q+ K QG  V V      E +L V K+LGAD  +N   ED    V E T G 
Sbjct: 174 GPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADA-VNGGEEDLAELVNEITDGD 232

Query: 208 GVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 260
           G DV+++C GA    ++ L  L   GR+  +G  G     +++  +  K L+V 
Sbjct: 233 GADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVI 286

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  139 bits (353), Expect = 1e-38
 Identities = 100/355 (28%), Positives = 162/355 (45%), Gaps = 48/355 (13%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ + G  +  ++++V  P+    EVL+K+EA+ +   D     G +P        
Sbjct: 1   MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLI 59

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV--------C----------------ALLGG----G 92
            G E +G +++VG  VS  KVGD+V        C                    G    G
Sbjct: 60  GGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDG 119

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPGESFLVHGGS 149
            +AE     A  V P+P G+S + AA    + C   TV+  +   + L PG+  ++ G  
Sbjct: 120 TFAEYAIADARYVTPIPDGLSFEQAAP---LLCAGVTVYKAL-KKAGLKPGDWVVISGAG 175

Query: 150 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
            G+G   +Q  K  G+RV      +EKL + K+LGAD  +++K  D V  VKE TGG G 
Sbjct: 176 GGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGA 235

Query: 210 D-VILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRS 268
             V++  + A+ +++ L  L   G L  +G   G    L+   L  + +T+  + + +R 
Sbjct: 236 HAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQ 295

Query: 269 TENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323
              +AL  +          A GKVKP I    PL +  E  + ME  +  G++++
Sbjct: 296 DLQEALEFA----------ARGKVKPHIQVV-PLEDLNEVFEKMEEGKIAGRVVV 339

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  138 bits (349), Expect = 3e-38
 Identities = 106/363 (29%), Positives = 163/363 (44%), Gaps = 61/363 (16%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+  P     ++L+EV  P+    EVL+KV A  +   D  + +G +   K     
Sbjct: 1   MKAAVLHGPN---DVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLK-PPRI 56

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCA------------LLG---------------GGG 93
            G E +G I+ VG  V+ +KVGD+V              L G                GG
Sbjct: 57  LGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGG 116

Query: 94  YAEKVAVPA-----GQVLPVPSGVSLKDAAAFPEVACTV--WSTVFMTSHLSPGESFLVH 146
           +AE V VPA     G VL +P  VS ++AA    +AC +         + + PG++ LV 
Sbjct: 117 FAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCINAQR----KAGIKPGDTVLVI 172

Query: 147 GGSSG-IGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET 204
           G  +G IG     + K  G  +V V+  +E +L   K LGAD  I+   ED V +V+E T
Sbjct: 173 G--AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELT 230

Query: 205 GGKGVDVILDCMGA-SYFQRNLGSLNIDGR-LFIIGTQGGAKTELNITSLFAKRLTVQAA 262
            G+G DV++   G+     + L  +   GR LF  G   G+   ++   +  + +T+  +
Sbjct: 231 DGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGS 290

Query: 263 GLRSRSTENKALIVSEVEKNVWPAIAVGK--VKPVIYKYLPLCEAAEAHQLMESSQHIGK 320
              S     +AL +          IA GK  VK +I    PL +  EA +L    + + K
Sbjct: 291 YAASPEDYKEALEL----------IASGKIDVKDLITHRFPLEDIEEAFELAADGKSL-K 339

Query: 321 IML 323
           I++
Sbjct: 340 IVI 342

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  137 bits (346), Expect = 8e-38
 Identities = 100/357 (28%), Positives = 158/357 (44%), Gaps = 56/357 (15%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+++         +++EV DP+   DEV+IKV    L   D LQ +G YP  K    Y
Sbjct: 1   MKAVILPGFKQG--YRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMK----Y 54

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQVCALL-----------GG--------------- 91
           P   G E  GT+  VG+NV  +K GD+V +LL            G               
Sbjct: 55  PVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEEL 114

Query: 92  -GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS 150
            G +AE   V    ++ VP  VS + A   P V   V+  +     +  GE+ LV G   
Sbjct: 115 DGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRAG-VKKGETVLVTGAGG 173

Query: 151 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210
           G+G  AIQ+ K  G +V     SE K  +       V +  K  + V ++       G D
Sbjct: 174 GVGIHAIQVAKALGAKVIAVTSSESKAKIVSKYADYVIVGSKFSEEVKKI------GGAD 227

Query: 211 VILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKRLTVQAAGLRSRST 269
           ++++ +G    + +L SLN+ G++  IG    + T  L +  +  K + +      ++  
Sbjct: 228 IVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRD 287

Query: 270 ENKAL-IVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325
             +AL +V+E           GK+KPVI   + L E  +A + ++    IGKI++ P
Sbjct: 288 VEEALKLVAE-----------GKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333

Length = 334

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  134 bits (339), Expect = 1e-36
 Identities = 102/365 (27%), Positives = 160/365 (43%), Gaps = 55/365 (15%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+   G    ++L+E   P     +VLI+V AT +  +D    +G  P        
Sbjct: 1   MKAAVVYVGG--GDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDII 58

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLG------------------------------ 90
            G E  G ++ VG  V  +KVGD+V                                   
Sbjct: 59  LGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGG 117

Query: 91  --GGGYAEKVAVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
              GG+AE V VPA   +  +P G+   +AAA  E   T +      + + PG + +V G
Sbjct: 118 GIDGGFAEYVRVPADFNLAKLPDGIDE-EAAALTEPLATAYHGHAERAAVRPGGTVVVVG 176

Query: 148 -GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEET 204
            G   IG  AI + K  G   V V   S E+L + K+  GADV +N   +D  A + E T
Sbjct: 177 AGP--IGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELT 234

Query: 205 GGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAG 263
           GG+G DV+++ +G+     + L +L   G + ++G  GG    L    + +K LT++ + 
Sbjct: 235 GGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSL 294

Query: 264 LRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQ-HIGK 320
             S   + +  +           +A GK+ P  +I   LPL +AAEA++L    +    K
Sbjct: 295 RPSGREDFERAL---------DLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIK 345

Query: 321 IMLVP 325
           ++L P
Sbjct: 346 VVLKP 350

Length = 350

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score =  132 bits (334), Expect = 5e-36
 Identities = 104/355 (29%), Positives = 157/355 (44%), Gaps = 52/355 (14%)

Query: 1   MKAIVITQPG---SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
           MKAI  TQP     P+ L   E+  P     ++L++VEA ++N  DT  R G  P P   
Sbjct: 1   MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPG-- 58

Query: 58  SPY-PGLECSGTILSVGKNVSRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVS 113
            P   G + SG + +VG  V+ +KVGD+V     +   G  AE   V    V   P  +S
Sbjct: 59  QPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLS 118

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSP-----GESFLVHGGSSGIGTFAIQMGKC-QGVRV 167
             +AAA P  + T W  +F    +S      G++ L+ GG+ G+G+ AIQ+ K   G+ V
Sbjct: 119 FAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTV 178

Query: 168 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS 227
             TA   E +A  K+LGAD  IN+     +A   E  G + VD I            +  
Sbjct: 179 IATASRPESIAWVKELGADHVINHH--QDLAEQLEALGIEPVDYIFCLTDTDQHWDAMAE 236

Query: 228 LNIDGRLFIIGTQG------GAKTELNITSLFAKRLTVQAAGLRSRS--------TENKA 273
           L        I  QG        +  L++  L +K  +     + +RS         +++ 
Sbjct: 237 L--------IAPQGHICLIVDPQEPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEI 288

Query: 274 L--IVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAA---EAHQLMESSQHIGKIML 323
           L  +   ++         GK+K  + + L    A    EAH L+ES + IGKI+L
Sbjct: 289 LNEVADLLDA--------GKLKTTLTETLGPINAENLREAHALLESGKTIGKIVL 335

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  131 bits (332), Expect = 9e-36
 Identities = 99/361 (27%), Positives = 152/361 (42%), Gaps = 57/361 (15%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA  + + G P  L+L++V  P+    +VL++V    +  +D     G      G  PY
Sbjct: 1   MKAARLYEYGKP--LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDG---VWGGILPY 55

Query: 61  -----PGLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------LG- 90
                 G E +G +  VG  V   K GD V             C              G 
Sbjct: 56  KLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGI 115

Query: 91  --GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV-FMTSHLSPGESFLVHG 147
              GG+AE + VP+ +++ +P G+   +AA   +   T +  V     +L PG + +V G
Sbjct: 116 GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIG 175

Query: 148 -GSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205
            G  G+G  A+Q+ +      V     SEE L + + LGAD  +N  ++D V  V+E TG
Sbjct: 176 VG--GLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLN-ASDDVVEEVRELTG 232

Query: 206 GKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGL 264
           G+G D ++D +G+          L   GR  I+G  G  +   +        +     G 
Sbjct: 233 GRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHGRLPTSDLVPTEISVIGSLWGT 292

Query: 265 RSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324
           R+   E  AL  S            GKVK  I K+ PL +A EA   +   +  G+ +LV
Sbjct: 293 RAELVEVVALAES------------GKVKVEITKF-PLEDANEALDRLREGRVTGRAVLV 339

Query: 325 P 325
           P
Sbjct: 340 P 340

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score =  128 bits (324), Expect = 1e-34
 Identities = 93/348 (26%), Positives = 148/348 (42%), Gaps = 32/348 (9%)

Query: 1   MKAIVITQPGSP-EVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYP--PPKG 56
            KA+V T+ G P EVLQL+  E P     +EVL+K+ A  +N AD  Q +G YP  PP  
Sbjct: 1   AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTT 60

Query: 57  ASP--YPGLECSGTILSVGKNVSRWKVGDQVCALLGGGG-YAEKVAVPAGQVLPVPSGVS 113
             P    G E  G ++ VG  V   K GD V  L  G G +     VPA  ++ VP+ V 
Sbjct: 61  PEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVD 120

Query: 114 LKDAAAFPEVACTVWSTVFMTSH---LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVF-- 168
            + AA      CT +    +      L PG+  + +G +S +G   IQ+ K  G++    
Sbjct: 121 PEQAATLSVNPCTAY---RLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINV 177

Query: 169 VTAGSEEKLAVC--KDLGADVCINY---KTEDFVARVKEETGGKGVDVILDCMGASYFQR 223
           V    + +      K LGAD  +     ++      +K   GG+   + L+C+G      
Sbjct: 178 VRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGR-PKLALNCVGGKSATE 236

Query: 224 NLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA----AGLRSRSTENKALIVSEV 279
               L+  G +   G   G    +  + L  K +T++       L+  + E K  ++ E+
Sbjct: 237 LARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEEL 296

Query: 280 EKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHI---GKIMLV 324
            +     I  GK+K    + +      E    + ++      GK +LV
Sbjct: 297 AE----LIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLV 340

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  128 bits (323), Expect = 2e-34
 Identities = 105/369 (28%), Positives = 166/369 (44%), Gaps = 80/369 (21%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+V  +PG    L++ ++ +P     EVL++V+   +  +D       Y    G +P+
Sbjct: 1   MKALVCEKPG---RLEVVDIPEPVPGAGEVLVRVKRVGICGSDL----HIY---HGRNPF 50

Query: 61  ------PGLECSGTILSVGKNVSRWKVGDQVC------------------------ALLG 90
                  G E SG ++ VG+ V+  KVGD+V                          +LG
Sbjct: 51  ASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLG 110

Query: 91  ---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC-TVWSTVFMTSHLSPGESFLVH 146
               GG+AE + VPA   L VP G+SL  AA    V    + +     + ++ G++ LV 
Sbjct: 111 VHRDGGFAEYIVVPA-DALLVPEGLSLDQAAL---VEPLAIGAHAVRRAGVTAGDTVLVV 166

Query: 147 GGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206
           G +  IG   IQ+ K +G RV V    +E+L   ++LGAD  IN   ED  AR++E T G
Sbjct: 167 G-AGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDG 225

Query: 207 KGVDVILDCMGASYFQRNLGSLN--ID-----GRLFIIGTQGGAKTELNI-TSLFAKR-L 257
           +G DV++D  G      N  S+   ++     GR+ ++G    +K  +      F K+ L
Sbjct: 226 EGADVVIDATG------NPASMEEAVELVAHGGRVVLVGL---SKGPVTFPDPEFHKKEL 276

Query: 258 TVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESS 315
           T+    L SR          E   +V   +  GKV P  +I    P  +  EA  L E+ 
Sbjct: 277 TI----LGSR------NATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAP 326

Query: 316 Q-HIGKIML 323
              + K+++
Sbjct: 327 PGGVIKVLI 335

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  127 bits (322), Expect = 3e-34
 Identities = 102/366 (27%), Positives = 161/366 (43%), Gaps = 68/366 (18%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A V  + G P  L+++EV DP+   D V+++VEA  + R+D    +G    P    P+
Sbjct: 1   MRAAVYEEFGEP--LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGH--DPDVTLPH 56

Query: 61  -PGLECSGTILSVGKNVSRWKVGD---------------------QVCA------LLGGG 92
            PG E +G ++ VG++VSRW+VGD                      VC           G
Sbjct: 57  VPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPG 116

Query: 93  GYAEKVAVPAGQV--LPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPGESFLVHG 147
            +AE VAVP   V  + +P  V    AA    + C   T +  +   + + PGE   VHG
Sbjct: 117 SFAEYVAVPRADVNLVRLPDDVDFVTAAG---LGCRFATAFRALVHQARVKPGEWVAVHG 173

Query: 148 GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETGG 206
              G+G  A+ +    G RV      ++KL + ++LGA   +N  + ED  A V++ TGG
Sbjct: 174 CG-GVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGG 232

Query: 207 KGVDVILDCMGASYFQRN-LGSLNIDGRLFIIG--TQGGAKTELNITSLFAKRLTVQAA- 262
            G  V +D +G     RN + SL   GR   +G      A   L +  + A+ L +  + 
Sbjct: 233 -GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSH 291

Query: 263 GLRSRSTENKALIVSEVEKNVWPA----IAVGKVKP--VIYKYLPLCEAAEAHQLMESSQ 316
           G+ +                 + A    IA GK+ P  ++ + + L EA +A   M+   
Sbjct: 292 GMPAHR---------------YDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYA 336

Query: 317 HIGKIM 322
             G  +
Sbjct: 337 TAGITV 342

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  125 bits (315), Expect = 3e-33
 Identities = 101/353 (28%), Positives = 147/353 (41%), Gaps = 54/353 (15%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY- 60
           KA V+   G P  L+ +EV  P+    EVLIK+EA  +   D    +G +   K   P  
Sbjct: 1   KAAVVHAAGGP--LEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSK--YPLV 56

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV--------C----------------ALLGG----G 92
           PG E  G ++ VG  V   KVGD+V        C                A+  G    G
Sbjct: 57  PGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQG 116

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
           GYAE +   A   + +P G+ L  AA       TV+S +   +   PGE   V  G  G+
Sbjct: 117 GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVL-GIGGL 174

Query: 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212
           G  A+Q  +  G        S +K  + + LGAD  ++   E       E+    G DVI
Sbjct: 175 GHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAEL-----DEQAAAGGADVI 229

Query: 213 LDCMGASY--FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTE 270
           L     S    +  LG L   GR+ ++G         +I  L  KR ++  +    R+  
Sbjct: 230 LVT-VVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADL 288

Query: 271 NKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323
            +AL  +          A GKVKP+I +  PL +A EA++ ME      + +L
Sbjct: 289 QEALDFA----------AEGKVKPMI-ETFPLDQANEAYERMEKGDVRFRFVL 330

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  120 bits (303), Expect = 1e-31
 Identities = 83/247 (33%), Positives = 118/247 (47%), Gaps = 42/247 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP- 59
           MKA+V   PG    L+++EV  P+   DEVLIKV A  +   D    +G +    GA+P 
Sbjct: 1   MKALVYEGPGE---LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEF----GAAPP 53

Query: 60  -YPGLECSGTILSVGKNVSRWKVGDQV---------------------CALLGG------ 91
             PG E +G +++VG  V+ +KVGD+V                     C  L        
Sbjct: 54  LVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRN 113

Query: 92  GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
           GG+AE V VPA QV  +P  +S ++AA    ++C V     +     PG+S LV G    
Sbjct: 114 GGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLLGIK--PGDSVLVFGAGP- 170

Query: 152 IGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210
           IG    Q+ K  G  RV V   +EEKL + K LGA   ++   ED  A+  +E    G D
Sbjct: 171 IGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQ--KEDNPYGFD 228

Query: 211 VILDCMG 217
           V+++  G
Sbjct: 229 VVIEATG 235

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score =  120 bits (302), Expect = 2e-31
 Identities = 83/263 (31%), Positives = 120/263 (45%), Gaps = 27/263 (10%)

Query: 17  LQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP----PPKGASPYPGLECSGTILSV 72
           + +V  P     EVL+K     +N +D     G Y     PP       G E  G +++V
Sbjct: 20  IVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDC----GFEGVGEVVAV 75

Query: 73  GKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEV------ACT 126
           G+ V+ +KVGD V A +  G +AE   VPA   +PVP           PEV        T
Sbjct: 76  GEGVTDFKVGDAV-ATMSFGAFAEYQVVPARHAVPVP--------ELKPEVLPLLVSGLT 126

Query: 127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD 186
               +     +  GE+ LV   + G G FA+Q+ K  G  V  T  S+EK    K LG D
Sbjct: 127 ASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCD 186

Query: 187 VCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTE 246
             INYKTED    +K+E   KGVDV+ + +G   F   + +L + GRL +IG   G ++ 
Sbjct: 187 RPINYKTEDLGEVLKKEY-PKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSG 245

Query: 247 LNITSLFAKRLTVQAAGLRSRST 269
              + +    L  +   L ++S 
Sbjct: 246 TGPSPVKGATLPPK---LLAKSA 265

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  119 bits (301), Expect = 3e-31
 Identities = 91/288 (31%), Positives = 132/288 (45%), Gaps = 32/288 (11%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA      GS  +L L+EV  P+    EVL+KV+A  +  +D     G  P        
Sbjct: 1   MKAWRFH-KGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLT 59

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV----------CAL-LGG----------------GG 93
            G E +GT++ VG  V+ +KVGD+V          CAL   G                GG
Sbjct: 60  LGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGG 119

Query: 94  YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIG 153
           +AE + VPA  ++PVP GV    AA   +   T +  V     + PGE+ LV  G  G+G
Sbjct: 120 FAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLV-IGLGGLG 178

Query: 154 TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213
             A+Q+ K  G  V      EEKL + K+LGAD  +N   +      K    G G DVI 
Sbjct: 179 LNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPK-DKKAAGLGGGFDVIF 237

Query: 214 DCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 260
           D +G    F+    ++   GR+ ++G  G  K  ++++ L A+ L + 
Sbjct: 238 DFVGTQPTFEDAQKAVKPGGRIVVVGL-GRDKLTVDLSDLIARELRII 284

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  117 bits (296), Expect = 7e-31
 Identities = 83/284 (29%), Positives = 120/284 (42%), Gaps = 20/284 (7%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+V+  P +P  L+L EV DPQ    E L++V A +LNR +    K +   P GA P 
Sbjct: 1   MRALVVD-PDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGEL---KFAAERPDGAVP- 55

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
            G + +G +     + S   VG +V  L   G +AE VAVP G +  +P GVS   AA  
Sbjct: 56  -GWDAAGVVERAAADGSGPAVGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATL 114

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
           P    T    +     L  G   LV G S G+G FA+Q+    G  V    GS  +    
Sbjct: 115 PVAGVTALRALRRGGPLL-GRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGL 173

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           ++LGA           V     E  G  VD+++D +G     R L  L   G +  +G+ 
Sbjct: 174 RELGAAE---------VVVGGSELSGAPVDLVVDSVGGPQLARALELLAPGGTVVSVGSS 224

Query: 241 GGAKTELNITSLF----AKRLTVQAAGLRSRSTENKALIVSEVE 280
            G     N  +       +RL             + A ++  V 
Sbjct: 225 SGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVA 268

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score =  109 bits (275), Expect = 1e-29
 Identities = 51/112 (45%), Positives = 70/112 (62%), Gaps = 2/112 (1%)

Query: 151 GIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
           G+G  A+Q+ K  G  RV     SEEKL + K+LGAD  INY+ EDFV RV+E TGG+GV
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGRGV 60

Query: 210 DVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 260
           DV++DC+GA +  ++ L  L   GR+ ++G  GGA     +  L  K LT+ 
Sbjct: 61  DVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTIL 112

Length = 131

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  115 bits (290), Expect = 2e-29
 Identities = 96/323 (29%), Positives = 142/323 (43%), Gaps = 61/323 (18%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+  P  P  L ++E+  P+ K+ E+LI+V A  +  +D    KG  P P      
Sbjct: 1   MKAAVLKGPNPP--LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPFPPPF--V 56

Query: 61  PGLECSGTILSVGKNV---SRWKVGDQV-------------CA----------------- 87
            G E SG ++ VG NV       VGD+V             CA                 
Sbjct: 57  LGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLK 116

Query: 88  --LLGG-----------------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW 128
             L  G                 GG AE   VPA  + P+P  +   ++A       T +
Sbjct: 117 GTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAY 176

Query: 129 STVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCKDLGADV 187
             +   + + PGE+  V G   G+G+ AIQ+ K  G    +     +EKLA  K+LGA  
Sbjct: 177 GALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATH 235

Query: 188 CINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIG-TQGGAKT 245
            +N   ED VA ++E TGG+GVDV+++ +G    F+  L  +   GR  ++G   GGA  
Sbjct: 236 TVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATA 295

Query: 246 ELNITSLFAKRLTVQAA-GLRSR 267
           E+ IT L  + + +  + G R R
Sbjct: 296 EIPITRLVRRGIKIIGSYGARPR 318

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  114 bits (287), Expect = 3e-29
 Identities = 97/348 (27%), Positives = 145/348 (41%), Gaps = 59/348 (16%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA+ +T+PG P  L  ++V  P     EVLIKVEA  +  +D   ++G+ P       Y
Sbjct: 1   YKAVQVTEPGGPLELVERDVPLPGP--GEVLIKVEACGVCHSDAFVKEGAMPGLS----Y 54

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV-CALLGG------------------------- 91
           P   G E  G I +VG+ VSRWKVGD+V     GG                         
Sbjct: 55  PRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVT 114

Query: 92  --GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGS 149
             GGYAE +  PA  +  +P  +   +AA       T ++     S   PG+   V G  
Sbjct: 115 RDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNA-LRNSGAKPGDLVAVQG-I 172

Query: 150 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
            G+G  A+Q     G R    +   +K  + + LGA   I+   ED    ++ E G  G 
Sbjct: 173 GGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQ-ELG--GA 229

Query: 210 DVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ--AAGLRS 266
            +IL     A      +G L   G+L I+G  G     ++   L   R ++    +G  +
Sbjct: 230 KLILATAPNAKAISALVGGLAPRGKLLILGAAGEP-VAVSPLQLIMGRKSIHGWPSG-TA 287

Query: 267 RSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMES 314
             +E   L  S          A+  V+P++  + PL +A EA+  M S
Sbjct: 288 LDSE-DTLKFS----------ALHGVRPMVETF-PLEKANEAYDRMMS 323

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score =  111 bits (280), Expect = 3e-28
 Identities = 78/236 (33%), Positives = 111/236 (47%), Gaps = 23/236 (9%)

Query: 2   KAIVITQPGSPEVLQLQEVE---DPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGAS 58
           KA+      SP  L +  ++       KD+E+++KV A ALN  D L+   SY       
Sbjct: 2   KALTFKNNTSP--LTITTIKLPLPNCYKDNEIVVKVHAAALNPVD-LKLYNSYTFHFKVK 58

Query: 59  PYP-GLECSGTILSVGKNV-SRWKVGDQVCAL-----LGGGGYAEKVAV-PAGQ---VLP 107
               G + SG I+ VG NV S WKVGD+VC +      G G  ++ + V P      +  
Sbjct: 59  EKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITR 118

Query: 108 VPSGVSLKDAAAFPEVACTVWSTVF-MTSHLSPGESFLVHGGSSGIGTFAIQMGK-CQGV 165
            P  +SL++AAA+P V  T +  +  +   L P    LV GGS+ +G FAIQ+ K    +
Sbjct: 119 KPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNI 178

Query: 166 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE----ETGGKGVDVILDCMG 217
              V   S     + K LGAD  I+Y     V  +K       G    D+ILDC+G
Sbjct: 179 GTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVG 234

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  110 bits (277), Expect = 9e-28
 Identities = 80/286 (27%), Positives = 116/286 (40%), Gaps = 62/286 (21%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGS---------- 50
           MKA           ++++EV +P +K  EV IKV    +         GS          
Sbjct: 1   MKAARYHGRKD---IRVEEVPEPPVKPGEVKIKVAWCGIC--------GSDLHEYLDGPI 49

Query: 51  YPPPKGASPYPGL--------ECSGTILSVGKNVSRWKVGDQVC---------------- 86
           + P +G     G         E SG ++ VG  V+ +KVGD+V                 
Sbjct: 50  FIPTEGHPHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRG 109

Query: 87  --------ALLG----GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT 134
                     +G    GGG+AE V VPA  V  +P  V L + AA  E     W  V   
Sbjct: 110 LYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPL-EEAALVEPLAVAWHAV-RR 167

Query: 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKT 193
           S   PG++ LV G    IG   I   K  G  ++ V+  SE +  + ++LGA + ++   
Sbjct: 168 SGFKPGDTALVLGAGP-IGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE 226

Query: 194 EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIG 238
            D VA V++ TGG GVDV  DC G  +     + +L   G    + 
Sbjct: 227 VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVA 272

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  108 bits (273), Expect = 2e-27
 Identities = 115/363 (31%), Positives = 164/363 (45%), Gaps = 60/363 (16%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD------TLQRKGSYPPP 54
           MKAIV T+ G     +L EV  P+    EVLIKV A ++   D          +    PP
Sbjct: 1   MKAIVKTKAGPG--AELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPP 58

Query: 55  KGASPYPGLECSGTILSVGKNVSRWKVGDQVCA------------------------LLG 90
                  G E +G ++ VG+ V+R KVGD V A                        +LG
Sbjct: 59  L----IFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILG 114

Query: 91  ---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
               G +AE V VP   +      +  + A+    +   V  TV +   +S G+S L+  
Sbjct: 115 VDTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAV-HTV-LAGDVS-GKSVLI-T 170

Query: 148 GSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206
           G   IG  AI + K  G   V  +  +  +L + K +GADV IN + ED V  VK  T G
Sbjct: 171 GCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREED-VVEVKSVTDG 229

Query: 207 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFA-KRLTVQAAGL 264
            GVDV+L+  G     ++ L +L   GR+ I+G   G   ++++ +L   K LTVQ  G+
Sbjct: 230 TGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG-PVDIDLNNLVIFKGLTVQ--GI 286

Query: 265 RSRSTENKALIVSEVEKNVWPAIAVGKV--KPVIYKYLPLCEAAEAHQLMESSQHIGKIM 322
             R        VS + K+       GKV   PVI   LPL +  EA +LM S +  GK++
Sbjct: 287 TGRKMFETWYQVSALLKS-------GKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVV 338

Query: 323 LVP 325
           L P
Sbjct: 339 LYP 341

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score =  108 bits (272), Expect = 3e-27
 Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 12/265 (4%)

Query: 1   MKAIVITQPGSPE-VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY--PPPKGA 57
           M+A V TQ G P  VL++ EV  P     EVL++   + ++  D    +G+Y   P   A
Sbjct: 1   MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPA 60

Query: 58  SPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
               G E  G + +VG+ V   +VG +V      G +AE    PA  ++P+P G+S + A
Sbjct: 61  IG--GSEAVGVVDAVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVA 118

Query: 118 A---AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174
           A   A P  A  +   +     + PG+  + +     +G     +   +G+ V      +
Sbjct: 119 AQLIAMPLSALMLLDFL----GVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRD 174

Query: 175 EKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL 234
             +A  + LG    ++ +   +  +V+E  GG  + V LD +G       L  L   G L
Sbjct: 175 AGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGTL 234

Query: 235 FIIGTQGGAKTELNITSLFAKRLTV 259
              G+  G   +++   L  K+ TV
Sbjct: 235 VSFGSMSGEPMQISSGDLIFKQATV 259

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score =  108 bits (271), Expect = 3e-27
 Identities = 80/273 (29%), Positives = 121/273 (44%), Gaps = 26/273 (9%)

Query: 6   ITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQ-RKG----SYPPPKGASPY 60
           +T PG  EV   +E   P     +VL++VE   +  +D     +G     YP   G    
Sbjct: 1   LTGPGRFEV---EEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPG---G 54

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG E  G ++++G  V    VGD+V A L GG +AE     A   +P+PS   L D  AF
Sbjct: 55  PGHEGWGRVVALGPGVRGLAVGDRV-AGLSGGAFAEYDLADADHAVPLPS---LLDGQAF 110

Query: 121 P--EVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS--EEK 176
           P   + C +   VF    +  G++  V G    IG   +Q+    G R  V A      +
Sbjct: 111 PGEPLGCALN--VFRRGWIRAGKTVAVIGAGF-IGLLFLQLAAAAGARR-VIAIDRRPAR 166

Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS--LNIDGRL 234
           LA+ ++LGA   +   +E  V RV+E TGG G DV+++ +G  +   +L    +   GRL
Sbjct: 167 LALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQW-PLDLAGELVAERGRL 225

Query: 235 FIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR 267
            I G        +   +   K + +  A  R  
Sbjct: 226 VIFGYHQDGPRPVPFQTWNWKGIDLINAVERDP 258

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  106 bits (268), Expect = 1e-26
 Identities = 100/367 (27%), Positives = 156/367 (42%), Gaps = 65/367 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           MKA+V   PG   V   +EV  PQI+D  + ++KV A A+  +D    +G  P   G   
Sbjct: 1   MKAVVFKGPGDVRV---EEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTPGFVL 57

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQV---------------------CA--LLGG----- 91
             G E  G ++ VG  V   KVGD+V                     CA   L G     
Sbjct: 58  --GHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSP 115

Query: 92  ---GGYAEKVAVPA--GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH 146
              G  AE V VP   G +L +P G+S + A    ++  T +      + + PG++  V 
Sbjct: 116 NLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGA-KRAQVRPGDTVAVI 174

Query: 147 GGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205
           G    +G  A+   +     RVF      E+L     LGA+  IN++  + V RV+E T 
Sbjct: 175 GCGP-VGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAEP-INFEDAEPVERVREATE 232

Query: 206 GKGVDVILDCMGASYFQRNLGSLNID-----GRLFIIGTQGGAKTELNITSLFAKRLTVQ 260
           G+G DV+L+ +G +     L  L  D     G +  +G     +        + K LT++
Sbjct: 233 GRGADVVLEAVGGA---AAL-DLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLR 288

Query: 261 AAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHI 318
                 RS   + L          P +  G++    +I   +PL EA EA++L +  + +
Sbjct: 289 FGRCPVRSLFPELL----------PLLESGRLDLEFLIDHRMPLEEAPEAYRLFD-KRKV 337

Query: 319 GKIMLVP 325
            K++L P
Sbjct: 338 LKVVLDP 344

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score =  106 bits (266), Expect = 5e-26
 Identities = 91/392 (23%), Positives = 155/392 (39%), Gaps = 89/392 (22%)

Query: 1   MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRA-------------DTLQ 46
             AI   + G P + +QL+ V  P++   EVL+ V A  +N                 L+
Sbjct: 10  AFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLR 69

Query: 47  RKGSYPPPKGASPY--PGLECSGTILSVGKNVSRWKVGDQVCA----------------- 87
           + G     K   P+   G + SG +  VG  V+RWKVGD+V A                 
Sbjct: 70  KYG-----KLDLPFHIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRDGDP 124

Query: 88  LLGG-----------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF--MT 134
           +L             G +AE   V   Q++P P  ++ ++AA       T +  +     
Sbjct: 125 MLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNP 184

Query: 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE 194
           + + PG++ L+ G + G+G++A Q+ +  G        S EK   C+ LGA+  I+    
Sbjct: 185 AAVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRSLGAEAVIDRNDF 244

Query: 195 D----------------------FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
                                  F  R++E TGG+  D++ +  G + F  ++      G
Sbjct: 245 GHWGRLPDHNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVYVCRRGG 304

Query: 233 RLFIIGTQGGAKTELNITSLFAKRLTVQ---AAGLRSRSTENKALIVSEVEKNVWPAIAV 289
            + I G   G   + +   L+ ++  +Q    A LR     N+              +A 
Sbjct: 305 MVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFANLREAYEANR-------------LVAK 351

Query: 290 GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI 321
           G++ P + K  PL E  +AHQ +  + H G +
Sbjct: 352 GRIDPTLSKTYPLEEIGQAHQDVHRNHHQGNV 383

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  104 bits (262), Expect = 1e-25
 Identities = 98/369 (26%), Positives = 149/369 (40%), Gaps = 63/369 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY--------- 51
           MKA  + +PG P  L+  E++ P+    EVL+KV A  +  +D     G Y         
Sbjct: 1   MKAAAVVEPGKP--LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMS 58

Query: 52  -PPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQV---------------------CA- 87
                   P   G E  G +++VG + +  KVGD+V                     CA 
Sbjct: 59  LDDRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAK 118

Query: 88  ---LLG--GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGES 142
              L     GGYAE V VP  + L  P G+    AA       T +S V     L   E 
Sbjct: 119 GRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEP 178

Query: 143 FLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 201
            ++ G + G+G  A+ + K  G   + V    E KL   K  GADV +N    D   R+ 
Sbjct: 179 VVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRII 237

Query: 202 EETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNI-TSLFA-KRLT 258
           +  GG GVD ++D +  S         L   G+L ++G  GG   E  +   L   + LT
Sbjct: 238 KAAGG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGG---EATLPLPLLPLRALT 293

Query: 259 VQAAGLRSRSTENKALI--VSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQ 316
           +Q +       E + L+                GK+KP+     PL +  +A   +++ +
Sbjct: 294 IQGS-YVGSLEELRELVALAKA-----------GKLKPIPLTERPLSDVNDALDDLKAGK 341

Query: 317 HIGKIMLVP 325
            +G+ +L P
Sbjct: 342 VVGRAVLKP 350

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score =  102 bits (257), Expect = 4e-25
 Identities = 74/270 (27%), Positives = 118/270 (43%), Gaps = 15/270 (5%)

Query: 1   MKAIVITQPGSPEV---LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
           MKA+++ + G P     L L E E P+    EVLIKVEA  +N +D    KG Y   K  
Sbjct: 1   MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKAL 60

Query: 58  SPYPGLECSGTILSVGKNVSRW-KVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLK 115
              PG E SGT+++ G        +G +V       G YAE     A Q LP+P GVS +
Sbjct: 61  PVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFE 120

Query: 116 DAAAF---PEVACTVWSTVFMTSHLSPGESFLVH-GGSSGIGTFAIQMGKCQGVRVFVTA 171
             A+    P  A  +  T             +VH   +S +G   +++ K  G++V    
Sbjct: 121 QGASSFVNPLTALGMLETAREEGA-----KAVVHTAAASALGRMLVRLCKADGIKVINIV 175

Query: 172 GSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231
             +E++ + K +GA+  +N    DF+  +KE        +  D +G     + L ++   
Sbjct: 176 RRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPYG 235

Query: 232 GRLFIIGTQGGAKTEL-NITSLFAKRLTVQ 260
             L++ G   G   E  +   L  K  +++
Sbjct: 236 STLYVYGYLSGKLDEPIDPVDLIFKNKSIE 265

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score =  101 bits (255), Expect = 9e-25
 Identities = 90/346 (26%), Positives = 136/346 (39%), Gaps = 61/346 (17%)

Query: 9   PGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQR------KGSYPPPKGASPYPG 62
           P  P+  +L EV  P++KD EVL++    ++   D   R      K   PP +   P  G
Sbjct: 14  PPPPDDFELVEVPLPELKDGEVLVRTLYLSV---DPYMRGWMSDAKSYSPPVQLGEPMRG 70

Query: 63  LECSGTILSVGK----NVSRWKVGDQVCALLGGGGYAEKVAVPAG---QVLPVPSGVSLK 115
                    VG+        +KVGD V    G  G+ E   V      + L    G+ L 
Sbjct: 71  G-------GVGEVVESRSPDFKVGDLV---SGFLGWQEYAVVDGASGLRKLDPSLGLPLS 120

Query: 116 DA------------AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ 163
                             E+               PGE+ +V   +  +G+   Q+ K  
Sbjct: 121 AYLGVLGMTGLTAYFGLTEIG-----------KPKPGETVVVSAAAGAVGSVVGQIAKLL 169

Query: 164 GVRVFVTAGSEEKLA-VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQ 222
           G RV   AGS+EK   + ++LG D  INYKT D    +KE     G+DV  D +G     
Sbjct: 170 GARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAA-PDGIDVYFDNVGGEILD 228

Query: 223 RNLGSLNIDGRLFIIGT--QGGAKTEL---NITSLFAKRLTVQAAGLRSRSTENKALIVS 277
             L  LN  GR+ + G   Q  A       N+ ++  KRLT+Q  G       ++     
Sbjct: 229 AALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQ--GFIVSDYADRF---P 283

Query: 278 EVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323
           E    +   +A GK+K        L  A EA   + + ++ GK+++
Sbjct: 284 EALAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score =  100 bits (252), Expect = 4e-24
 Identities = 97/393 (24%), Positives = 157/393 (39%), Gaps = 97/393 (24%)

Query: 1   MKAIVI--TQPGSPE-VLQLQEVEDPQIKDDEVLIKVEATALN-------------RADT 44
           M A  I   + G P   +QL++V  P++   EVL+ V A  +N                 
Sbjct: 13  MYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAA 72

Query: 45  LQRKGSYPPPKGASPY--PGLECSGTILSVGKNVSRWKVGDQVCAL-----------LGG 91
            QR+G         PY   G + SG + +VG+ V  WKVGD+V               GG
Sbjct: 73  RQRRGR------DEPYHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGG 126

Query: 92  -----------------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT 134
                            G +A+   V A Q++P P  +S ++AAA+  V  T +  +F  
Sbjct: 127 DPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLF-- 184

Query: 135 SH----LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN 190
                 + PG++ L+ G S G+G+ AIQ+ +  G        SEEK   C+ LGA+  IN
Sbjct: 185 GWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVIN 244

Query: 191 YKTED----------------------FVARVKEETGGK-GVDVILDCMGASYFQRNLGS 227
            +  D                      F   + +  GG+   D++ +  G + F  ++  
Sbjct: 245 RRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFV 304

Query: 228 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA---AGLRSRSTENKALIVSEVEKNVW 284
            +  G + I     G     +   L+ ++  +Q    A  R  +  N+ L++        
Sbjct: 305 CDRGGMVVICAGTTGYNHTYDNRYLWMRQKRIQGSHFANDREAAEANR-LVMK------- 356

Query: 285 PAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQH 317
                G++ P + K   L E  +AHQLM  +QH
Sbjct: 357 -----GRIDPCLSKVFSLDETPDAHQLMHRNQH 384

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 94.8 bits (236), Expect = 5e-24
 Identities = 51/141 (36%), Positives = 71/141 (50%), Gaps = 12/141 (8%)

Query: 183 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGG 242
           LGAD  I+Y TEDF     E T G+GVDV+LD +G     R L +L   GRL  IG    
Sbjct: 1   LGADEVIDYTTEDFE----EATAGEGVDVVLDTVGGETLLRALLALKPGGRLVSIGGPDL 56

Query: 243 AKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPL 302
             +     +  A    V+   L   S       ++E+       +  GK++PVI +  PL
Sbjct: 57  LLSV----AAKAGGRGVRGVFLFPVSPGEAGADLAEL----AELVEAGKLRPVIDRVFPL 108

Query: 303 CEAAEAHQLMESSQHIGKIML 323
            EAAEAH+ +ES +  GK++L
Sbjct: 109 EEAAEAHRYLESGRARGKVVL 129

Length = 129

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 98.4 bits (246), Expect = 2e-23
 Identities = 97/366 (26%), Positives = 156/366 (42%), Gaps = 67/366 (18%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK------GSYPPP 54
           MKA+V  +      L L +V  P+   ++VLIKV+ TA+   D            + P P
Sbjct: 1   MKALVKLKAE--PGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVP 58

Query: 55  KGASPYPGLECSGTILSVGKNVSRWKVGDQVCA---LLGG-------------------- 91
                  G E  G ++ VG  V+ +KVGD+V     ++ G                    
Sbjct: 59  M----VVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG 114

Query: 92  ----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
               G +AE + +PA  V  +P  +    AA F      V  T   +  L  GE  L+ G
Sbjct: 115 VNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAV-HTAL-SFDLV-GEDVLITG 171

Query: 148 GSSG-IGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205
             +G IG  A  + K  G R V +T  +E +L + + +GA   +N   ED    + E   
Sbjct: 172 --AGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGM 229

Query: 206 GKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGL 264
            +G DV L+  GA S F++ L ++N  GR+ ++G   G    ++   +  K LT++  G+
Sbjct: 230 TEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPG-DMAIDWNKVIFKGLTIK--GI 286

Query: 265 RSR---STENK--ALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIG 319
             R    T  K  AL+ S ++           + P+I    P+ +  +  + M S Q  G
Sbjct: 287 YGREMFETWYKMSALLQSGLD-----------LSPIITHRFPIDDFQKGFEAMRSGQS-G 334

Query: 320 KIMLVP 325
           K++L  
Sbjct: 335 KVILDW 340

Length = 341

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 98.1 bits (245), Expect = 2e-23
 Identities = 69/260 (26%), Positives = 106/260 (40%), Gaps = 27/260 (10%)

Query: 17  LQEVEDPQIKDDEVLIKVEATALNRADTLQRKG---SYPPPKGASPYPGLECSGTILSVG 73
           L+EV+ P+  + +VL++    +L+      R     SY PP       G    G  ++  
Sbjct: 29  LEEVDVPEPGEGQVLLRTLYLSLD-PYMRGRMSDAPSYAPPVE----LGEVMVGGTVAKV 83

Query: 74  --KNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPV-PSGVSLKDA---AAFPEVACTV 127
              N   ++ GD V   +G  G+ E        +  + PS   L         P +  T 
Sbjct: 84  VASNHPGFQPGDIV---VGVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGL--TA 138

Query: 128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD 186
           +  +        GE+ +V   +  +G+   Q+ K +G RV   AG  EK     + LG D
Sbjct: 139 YFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD 198

Query: 187 VCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGG-AKT 245
             I+YK EDF   +KE    KG+DV  + +G       L  LN+  R+ + G        
Sbjct: 199 AGIDYKAEDFAQALKEAC-PKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYNAP 257

Query: 246 EL-----NITSLFAKRLTVQ 260
           EL      +  L AKRL VQ
Sbjct: 258 ELPPGPRRLPLLMAKRLRVQ 277

Length = 340

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 97.9 bits (244), Expect = 3e-23
 Identities = 85/340 (25%), Positives = 152/340 (44%), Gaps = 25/340 (7%)

Query: 2   KAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGAS 58
           KA+   +P     P+ L   ++  P+    ++L++V+A ++N  DT  R    P   G  
Sbjct: 1   KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEA-GQP 59

Query: 59  PYPGLECSGTILSVGKNVSRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSLK 115
              G + +G +++VG  V+ +K GD+V     +   G  AE   V    V   P  +S  
Sbjct: 60  KILGWDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFA 119

Query: 116 DAAAFPEVACTVWSTVFMTSHLSPGES-----FLVHGGSSGIGTFAIQMGK-CQGVRVFV 169
           +AAA P  + T W  +F    ++   +      L+ GG+ G+G+  IQ+ +   G+ V  
Sbjct: 120 EAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIA 179

Query: 170 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD-VILDCMGASYFQRNLGSL 228
           TA   E      +LGA   I++ ++   A++ E+ G + V  V        +F+  +  L
Sbjct: 180 TASRPESQEWVLELGAHHVIDH-SKPLKAQL-EKLGLEAVSYVFSLTHTDQHFKEIVELL 237

Query: 229 NIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE--KNVWPA 286
              GR  +I        EL+I+    K +++    + +RS    A ++ +      V   
Sbjct: 238 APQGRFALIDDPA----ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARL 293

Query: 287 IAVGKVKPVIYKYLPLCEAA---EAHQLMESSQHIGKIML 323
           +  GK++  + +      AA    AH L+ES +  GKI+L
Sbjct: 294 VDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVL 333

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score = 97.0 bits (242), Expect = 6e-23
 Identities = 90/363 (24%), Positives = 151/363 (41%), Gaps = 62/363 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+  V   PG   V +L+E   P     EVL++V+A+ L  +D       +  P      
Sbjct: 1   MRGAVF--PGDRTV-ELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVI 57

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV-------CA---------------------LLGGG 92
           PG E +G +++VG  V+ ++VGD+V       C                          G
Sbjct: 58  PGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDG 117

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG-GSSG 151
           G+AE + VP   ++P+P  +S  D A       T +  +     +S  ++ LV G G  G
Sbjct: 118 GHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVG 176

Query: 152 IGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210
           +G  A+ + +  G   V     S E+L + K LGAD  IN   +D V  ++E T G G D
Sbjct: 177 LG--ALMLARALGAEDVIGVDPSPERLELAKALGADFVIN-SGQDDVQEIRELTSGAGAD 233

Query: 211 VILDCMGASYFQRN-LGSLNIDGRLFIIGTQGGAKTELNITS-LFAKRLTVQAAGLRSRS 268
           V ++C G +  +R  L ++   GRL ++G   G +  + +++ L  K+ T+    + S  
Sbjct: 234 VAIECSGNTAARRLALEAVRPWGRLVLVGE--GGELTIEVSNDLIRKQRTL----IGSWY 287

Query: 269 T------ENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIM 322
                  E    +       +           ++     L +A EA+ L       GK++
Sbjct: 288 FSVPDMEECAEFL---ARHKLEVD-------RLVTHRFGLDQAPEAYALFA-QGESGKVV 336

Query: 323 LVP 325
            V 
Sbjct: 337 FVF 339

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score = 96.8 bits (242), Expect = 9e-23
 Identities = 68/269 (25%), Positives = 104/269 (38%), Gaps = 61/269 (22%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A V+ + G P  ++  E++DP     EVL+++ A  L  +D     G  P P  A   
Sbjct: 1   MRAAVLHEVGKPLEIEEVELDDP--GPGEVLVRIAAAGLCHSDLHVVTGDLPAPLPA--V 56

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVC---------------------------------- 86
            G E +G +  VG  V+  K GD V                                   
Sbjct: 57  LGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPD 116

Query: 87  -------------ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV---WST 130
                        A+ G G +AE   VP   V+ +   + L  AA    + C V      
Sbjct: 117 GTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAAL---LGCGVTTGVGA 173

Query: 131 VFMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCKDLGADVC 188
           V  T+ + PG++  V G G  G+G  AIQ  +  G    +      EKL + +  GA   
Sbjct: 174 VVNTARVRPGDTVAVIGCG--GVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHT 231

Query: 189 INYKTEDFVARVKEETGGKGVDVILDCMG 217
           +N   +D V  V++ T G+G D   + +G
Sbjct: 232 VNASEDDAVEAVRDLTDGRGADYAFEAVG 260

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 89.9 bits (224), Expect = 2e-20
 Identities = 70/218 (32%), Positives = 97/218 (44%), Gaps = 37/218 (16%)

Query: 1   MKAIVITQPGSPEV--LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGAS 58
           MKA+V+ +PG  E   L+L EV  P+    EVLIKVEA  + R D    +G  PPPK   
Sbjct: 1   MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPL 60

Query: 59  PYPGLECSGTILSVGKNVSRWKVGDQV-----------CAL-LGG--------------- 91
             PG E  G + +VG  V+R+ VGD+V           C     G               
Sbjct: 61  -IPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTV 119

Query: 92  -GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEV-ACTVWSTVFMTSHLSPGESFLVHG-G 148
            GGYAE +        P+P      D  A P + A  +       + L PG+   ++G G
Sbjct: 120 DGGYAEYMVADERFAYPIPED--YDDEEAAPLLCAGIIGYRALKLAGLKPGQRLGLYGFG 177

Query: 149 SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD 186
           +S     A+Q+ + QG  VF    S E   + ++LGAD
Sbjct: 178 AS--AHLALQIARYQGAEVFAFTRSGEHQELARELGAD 213

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 90.0 bits (224), Expect = 2e-20
 Identities = 76/317 (23%), Positives = 113/317 (35%), Gaps = 76/317 (23%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            +A V  + G P  L+++EV+    +  EVL+++ AT +   D     G  P       +
Sbjct: 3   TRAAVAREAGKP--LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-----F 55

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
           P   G E +G + +VG+ V+  K GD V             C                  
Sbjct: 56  PAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKG 115

Query: 88  ------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---- 125
                              LG   +AE   V    ++ +       D  A  E AC    
Sbjct: 116 TMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKI-------DPDAPLEKACLLGC 168

Query: 126 ---TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK 181
              T    V  T+ + PG++  V G   G+G  AIQ  K  G  R+     + EKL + K
Sbjct: 169 GVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK 227

Query: 182 DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQ 240
             GA   +N K  D V     E    G D   +C+G     ++ L + +  G   IIG  
Sbjct: 228 KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVA 287

Query: 241 G-GAKTELNITSLFAKR 256
           G G +       L   R
Sbjct: 288 GAGQEISTRPFQLVTGR 304

Length = 366

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 89.3 bits (222), Expect = 3e-20
 Identities = 91/363 (25%), Positives = 151/363 (41%), Gaps = 54/363 (14%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           MKA+V   PG    + L+EV DP+I+   + +++V AT++  +D    +G  P  K    
Sbjct: 1   MKALVYLGPGK---IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMI 57

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQV----------------------------CALLGG 91
             G E  G ++ VG +V R K GD+V                              L   
Sbjct: 58  L-GHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNR 116

Query: 92  --GGYAEKVAVPAGQV--LPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
             GG AE V VP   +    +P G+  +DA    ++  T +    + + + PG +  V G
Sbjct: 117 IDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGAEL-AGIKPGSTVAVIG 175

Query: 148 -GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206
            G  G+   A         R+     + E+L + K+ GA   IN K  D V ++ E TGG
Sbjct: 176 AGPVGLCAVAGARLLGAA-RIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGG 234

Query: 207 KGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLR 265
           +GVD +++ +G    F++ +  +   G +  +G  G       +   F K LT    GL 
Sbjct: 235 RGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTF-KTGLV 293

Query: 266 SRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMES-SQHIGKIM 322
                   L+           I  GK+ P  +I    PL +  +A++L ++      K++
Sbjct: 294 PVRARMPELL---------DLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVV 344

Query: 323 LVP 325
           + P
Sbjct: 345 IRP 347

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 88.0 bits (219), Expect = 8e-20
 Identities = 68/273 (24%), Positives = 110/273 (40%), Gaps = 41/273 (15%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA+V+ +      L L+ +    + + +VLI+V  ++LN  D L   G+    +    Y
Sbjct: 1   FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTR---NY 57

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQVCALLGG------GGYAEKVAVPAGQVLPVPSG 111
           P   G++ +GT++S      R++ GD+V            GG+AE V VPA  V+P+P G
Sbjct: 58  PHTPGIDAAGTVVSSD--DPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEG 115

Query: 112 VSLKDAAAFPEVACTVWSTVF------MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV 165
           +SL++A        T   +V        T    P    LV G + G+G+ A+ +    G 
Sbjct: 116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGP---VLVTGATGGVGSIAVAILAKLGY 172

Query: 166 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK--------GVDVILDCMG 217
            V    G EE+    K LGA   ++   ED       +   K        G    +D +G
Sbjct: 173 TVVALTGKEEQADYLKSLGASEVLD--REDL-----LDESKKPLLKARWAGA---IDTVG 222

Query: 218 ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNIT 250
                  L      G +   G   G +    + 
Sbjct: 223 GDVLANLLKQTKYGGVVASCGNAAGPELTTTVL 255

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 86.0 bits (214), Expect = 4e-19
 Identities = 79/299 (26%), Positives = 130/299 (43%), Gaps = 54/299 (18%)

Query: 3   AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD----TLQRKGSYPPPKGAS 58
           A V+  PG    L+L+E   P+    EVL++V A  +  +D       R G +   +   
Sbjct: 1   AAVLHGPGD---LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKE--- 54

Query: 59  PYP---GLECSGTILSVGKNVSRWKVGDQV----------CALLGGGGY----------- 94
             P   G E +GT+++VG  V+  KVGD+V          C     G Y           
Sbjct: 55  --PMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAAT 112

Query: 95  -------AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
                     V  PA     +P  VSL++ A    ++  V +     + + PG++ LV G
Sbjct: 113 PPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHAC--RRAGVRPGDTVLVFG 170

Query: 148 GSSG-IGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTED---FVARVKE 202
             +G IG     + K  G  +V VT     +L   K+LGA   +N +TED      ++ E
Sbjct: 171 --AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAE 228

Query: 203 ETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 260
             GGKG DV+++C GA S  Q  + +    G + ++G  G  +  L +++   + + ++
Sbjct: 229 LLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGM-GKPEVTLPLSAASLREIDIR 286

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 82.7 bits (205), Expect = 3e-18
 Identities = 72/275 (26%), Positives = 119/275 (43%), Gaps = 33/275 (12%)

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG    G ++ VG  V+ +K GD+V      G +AE+V VPA  ++P+P G+  + AA  
Sbjct: 24  PGYSSVGRVVEVGSGVTGFKPGDRVFCF---GPHAERVVVPANLLVPLPDGLPPERAALT 80

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAV 179
             +A T  + V   +    GE   V G    +G  A Q+ K  G R V        +  +
Sbjct: 81  A-LAATALNGV-RDAEPRLGERVAVVGLGL-VGLLAAQLAKAAGAREVVGVDPDAARREL 137

Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIG 238
            + LG    +        A   +E GG+G DV+++  G  S  +  L  L   GR+ ++G
Sbjct: 138 AEALGPADPV-------AADTADEIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVG 190

Query: 239 TQGGAKTELNITSLF-AKRLTVQA--AGLRSRS------TENKALIVSEVEKNVWPAIAV 289
             G     L +   F  KRL +++       R       TE + L            +A 
Sbjct: 191 WYGL--KPLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEE------ALDLLAE 242

Query: 290 GKVKPVIYKYLPLCEAAEAHQLMESSQHIG-KIML 323
           G+++ +I   +P  +A EA++L+        K++L
Sbjct: 243 GRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 83.4 bits (207), Expect = 5e-18
 Identities = 101/389 (25%), Positives = 152/389 (39%), Gaps = 96/389 (24%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPP-PKGAS 58
           MKA+V    G   V   +EV DP+I+D  + +++V ATA+  +D     G  P   KG  
Sbjct: 1   MKALVWHGKGDVRV---EEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGD- 56

Query: 59  PYPGLECSGTILSVGKNVSRWKVGDQV--------------------------------- 85
              G E  G +  VG  V   KVGD+V                                 
Sbjct: 57  -ILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAK 115

Query: 86  ------CALLGG----GGY----AEKVAVPAGQV--LPVPSGVSLKDAAAFPEVACTVWS 129
                   + G     GGY    AE V VP   V    +P  +S + A    ++  T + 
Sbjct: 116 LYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYH 175

Query: 130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADV 187
              +   + PG++  V G    +G FA +  K  G  RV       E+L + +  LGA+ 
Sbjct: 176 AAELAE-VKPGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAET 233

Query: 188 CINYKTEDFVA-RVKEETGGKGVDVILDCMGASY-------FQRNLGSLNID-------- 231
            IN++  D V   ++E TGG+G DV +D +G           ++ L  L  D        
Sbjct: 234 -INFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREA 292

Query: 232 -------GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVW 284
                  G + IIG  GG   +  I +   K LT     LR   T  +  +       + 
Sbjct: 293 IQAVRKGGTVSIIGVYGGTVNKFPIGAAMNKGLT-----LRMGQTHVQRYL-----PRLL 342

Query: 285 PAIAVGKVKP--VIYKYLPLCEAAEAHQL 311
             I  G++ P  +I   LPL +A EA+++
Sbjct: 343 ELIESGELDPSFIITHRLPLEDAPEAYKI 371

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 82.6 bits (205), Expect = 6e-18
 Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 32/266 (12%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG------SYPPPK 55
           KA+V+ +       Q++ ++   + + +VLIKV  ++LN  D L   G      SYP   
Sbjct: 1   KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPM-- 58

Query: 56  GASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG------GGYAEKVAVPAGQVLPVP 109
                PG++ +GT++S      R++ GD+V     G      GGY++   VPA  ++P+P
Sbjct: 59  ----IPGIDAAGTVVS--SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLP 112

Query: 110 SGVSLKDAAAFPEVACTVWSTVF--MTSHLSPGE-SFLVHGGSSGIGTFAIQMGKCQGVR 166
            G+SL++A A      T   +V     + L+P +   LV G + G+G+ A+ +    G  
Sbjct: 113 EGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYE 172

Query: 167 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR--VKEETGGKGVDVILDCMGASYFQRN 224
           V  + G  E+    K+LGA   I+ +      +   KE   G      +D +G       
Sbjct: 173 VVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAG-----AVDTVGGHTLANV 227

Query: 225 LGSLNIDGRLFIIGTQGGAKTELNIT 250
           L  L   G +   G  GG   +L  T
Sbjct: 228 LAQLKYGGAVAACGLAGGP--DLPTT 251

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 82.2 bits (203), Expect = 1e-17
 Identities = 100/361 (27%), Positives = 150/361 (41%), Gaps = 59/361 (16%)

Query: 3   AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT------LQRKGSYPPPKG 56
           A++ T+PG     +L EV  P+    EVLIKV AT++   D          +    PP+ 
Sbjct: 1   ALMKTKPG--YGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQ- 57

Query: 57  ASPYPGLECSGTILSVGKNVSRWKVGDQVCA-----------LLGG-------------- 91
                G E +G ++ +G  V   KVGD V                G              
Sbjct: 58  ---VVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVD 114

Query: 92  --GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGS 149
             G +AE   VPA  +   P  +  + A     +   V  TV +   +S G+S LV G  
Sbjct: 115 TDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAV-HTV-LAGPIS-GKSVLVTGAG 171

Query: 150 SGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 208
             IG  AI + K  G   V V+  +E +L + K +GA   +N   ED V  V + T G+G
Sbjct: 172 P-IGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEG 230

Query: 209 VDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKRLTVQAAGLRS 266
           VDV L+  GA    ++ L ++   GR+ ++G   G  T +     +F K LT+   G+  
Sbjct: 231 VDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIF-KGLTIY--GITG 287

Query: 267 RSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324
           R        VS +       I  GK+   P+I       +  +  +LM S Q  GK++L 
Sbjct: 288 RHMFETWYTVSRL-------IQSGKLDLDPIITHKFKFDKFEKGFELMRSGQ-TGKVILS 339

Query: 325 P 325
            
Sbjct: 340 L 340

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 79.4 bits (196), Expect = 1e-16
 Identities = 65/267 (24%), Positives = 95/267 (35%), Gaps = 57/267 (21%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           KA V+ + G P  L ++E+E    K  EV IKV AT +   D     G  P P       
Sbjct: 2   KAAVLWEKGKP--LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPTPLPVI--L 57

Query: 62  GLECSGTILSVGKNVSRWKVGDQV-------------CA--------------------- 87
           G E +G + S+G  V+  K GD+V             C                      
Sbjct: 58  GHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSD 117

Query: 88  --------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133
                          LG   +AE   V    +  +     L+          T +     
Sbjct: 118 GTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVN 177

Query: 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYK 192
           T+ ++PG +  V  G  G+G   I   K  G  R+     +++K    K LGA  CIN +
Sbjct: 178 TAKVTPGSTCAVF-GLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPR 236

Query: 193 T--EDFVARVKEETGGKGVDVILDCMG 217
              +  V  + E T G GVD   + +G
Sbjct: 237 DQDKPIVEVLTEMTDG-GVDYAFEVIG 262

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 78.1 bits (193), Expect = 2e-16
 Identities = 69/264 (26%), Positives = 118/264 (44%), Gaps = 22/264 (8%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           +A+V+ +      + ++ +    + + +VLI+V  +++N  D L    S P  K    YP
Sbjct: 2   QALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGL---ASIPGGKIVKRYP 58

Query: 62  ---GLECSGTILSVGKNVSRWKVGDQVCAL---LG---GGGYAEKVAVPAGQVLPVPSGV 112
              G++ +GT+  V  N  R+K GD+V      LG    GGY+E   VPA  V+P+P G+
Sbjct: 59  FIPGIDLAGTV--VESNDPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGL 116

Query: 113 SLKDAAAFPEVACTVWSTV--FMTSHLSP-GESFLVHGGSSGIGTFAIQMGKCQGVRVFV 169
           +LK+A        T   ++     + L+P     LV G + G+G+ A+ +    G  V  
Sbjct: 117 TLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVA 176

Query: 170 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 229
           + G  +     K LGA   I    E+      +    +     +D +G       L +L 
Sbjct: 177 STGKADAADYLKKLGAKEVIP--REELQEESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQ 234

Query: 230 IDGRLFIIGTQGGAKTELNITSLF 253
             G + + G  GG + E   T++F
Sbjct: 235 YGGSVAVSGLTGGGEVE---TTVF 255

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 77.9 bits (193), Expect = 4e-16
 Identities = 85/315 (26%), Positives = 125/315 (39%), Gaps = 66/315 (20%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
            A V+ +PG P VL+  E++DP+   DEVL+++ AT +   D + R G  P P  A    
Sbjct: 4   TAAVVREPGGPFVLEDVELDDPR--PDEVLVRIVATGICHTDLVVRDGGLPTPLPAV--L 59

Query: 62  GLECSGTILSVGKNVSRWKVGDQVC------------------------ALLGGGG---- 93
           G E +G + +VG  V+  K GD V                          L   G     
Sbjct: 60  GHEGAGVVEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDG 119

Query: 94  ---------------------YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWS 129
                                +A    V    V+ V   V L+  A      C   T   
Sbjct: 120 STPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPL---GCGIQTGAG 176

Query: 130 TVFMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADV 187
            V       PG S  V G G+ G+   A+   K  G   +      + +L + K+LGA  
Sbjct: 177 AVLNVLKPRPGSSIAVFGAGAVGLA--AVMAAKIAGCTTIIAVDIVDSRLELAKELGATH 234

Query: 188 CINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQG-GAKT 245
            IN K ED VA ++E TGG GVD  LD  G  +  ++ + +L   G L ++G    GA+ 
Sbjct: 235 VINPKEEDLVAAIREITGG-GVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEV 293

Query: 246 ELNITSLFAKRLTVQ 260
            L++  L     T++
Sbjct: 294 TLDVNDLLVSGKTIR 308

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 77.7 bits (192), Expect = 4e-16
 Identities = 91/366 (24%), Positives = 146/366 (39%), Gaps = 69/366 (18%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           +A V+T PG P  L+++EV  P ++   VL++V    +  +D     G  P      P P
Sbjct: 2   RAAVLTGPGKP--LEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRP----RVPLP 55

Query: 62  ---GLECSGTI---------------LSVGKNV-----------------------SRWK 80
              G E  G +               L VG  V                       +R K
Sbjct: 56  IILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK 115

Query: 81  VGDQVCALLGG--GGYAEKVAVPAGQ-VLPVPSGVSLKDAAAFPEVAC---TVWSTVFMT 134
            G +         GGYAE + +P G  ++ VP  V  + AA      C   TV + +   
Sbjct: 116 YGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAP---ANCALATVLAALDRA 172

Query: 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCIN--- 190
             +  G++ +V G +  +G +A+   K  G  RV V  GS E+L + ++ GAD  I+   
Sbjct: 173 GPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDE 231

Query: 191 YKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKT-ELN 248
                  A V++ TGG+G DV+++  G  +     L  L   G   ++G+   A T  L+
Sbjct: 232 LPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLD 291

Query: 249 ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEA 308
              +  K LT+        S   +A  V  +E+         +   ++    PL +  EA
Sbjct: 292 PERIVRKNLTIIGVHNYDPSHLYRA--VRFLERT-QDRFPFAE---LVTHRYPLEDINEA 345

Query: 309 HQLMES 314
            +L ES
Sbjct: 346 LELAES 351

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 76.0 bits (188), Expect = 1e-15
 Identities = 75/332 (22%), Positives = 118/332 (35%), Gaps = 74/332 (22%)

Query: 14  VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP---GLECSGTIL 70
            L+    E   +  D+V IK+    +  +D    +  +    G + YP   G E  G ++
Sbjct: 11  KLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEW----GPTKYPLVPGHEIVGIVV 66

Query: 71  SVGKNVSRWKVGD----------------------QVCA---------LLGG----GGYA 95
           +VG  V+++KVGD                      Q C             G    GGYA
Sbjct: 67  AVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYA 126

Query: 96  EKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS----- 150
           + + V    V  +P G+    AA  P + C    TV+     SP +   V  G       
Sbjct: 127 DHIVVDERFVFKIPEGLDSAAAA--P-LLCA-GITVY-----SPLKRNGVGPGKRVGVVG 177

Query: 151 --GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 208
             G+G  A++  K  G  V   + S  K      LGAD  I  K  + + +         
Sbjct: 178 IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAA-----GS 232

Query: 209 VDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR 267
           +D+I+D + AS+     L  L   G L ++G        +    L   R +V  + +  R
Sbjct: 233 LDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLP-VPPFPLIFGRKSVAGSLIGGR 291

Query: 268 STENKAL-------IVSEVEKNVWPAIAVGKV 292
               + L       I   VE  V P   + + 
Sbjct: 292 KETQEMLDFAAEHGIKPWVE--VIPMDGINEA 321

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 75.7 bits (187), Expect = 2e-15
 Identities = 76/307 (24%), Positives = 121/307 (39%), Gaps = 69/307 (22%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           MKA+V   PG       ++   P I++  + ++K+  T +   D    KG  P       
Sbjct: 1   MKALVYHGPGKISW---EDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVT---- 53

Query: 60  YPGL----ECSGTILSVGKNVSRWKVGDQV----------CAL---------LGGG---G 93
            PG     E  G +  VG  V+ +KVGD+V          C             GG   G
Sbjct: 54  -PGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILG 112

Query: 94  Y------AEKVAVP-AGQVL-PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV 145
                  AE V +P A   L  +P GV  + A     V     S +  T +    E  ++
Sbjct: 113 NLIDGTQAEYVRIPHADNSLYKLPEGVDEEAA-----VML---SDILPTGY----ECGVL 160

Query: 146 HGGSSGIGTFAIQMGKCQGVRVFVTAG------------SEEKLAVCKDLGADVCINYKT 193
           +G      T AI      G+   +TA              + +L V K LGA   +N   
Sbjct: 161 NGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK 220

Query: 194 EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL 252
            D + +V E T G+GVDV+++ +G  + F+     +   G +  +G   G   +L++  L
Sbjct: 221 GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVH-GKPVDLHLEKL 279

Query: 253 FAKRLTV 259
           + K +T+
Sbjct: 280 WIKNITI 286

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 75.5 bits (186), Expect = 2e-15
 Identities = 71/285 (24%), Positives = 119/285 (41%), Gaps = 44/285 (15%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ +        + E     +K  E L+K+E   +   D     G +    G    
Sbjct: 1   MKAAVVNK--DHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDKTGRIL- 57

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV----------------------CALLGGGGY---- 94
            G E  G +  VG  V+  KVGD+V                      C  +   GY    
Sbjct: 58  -GHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDG 116

Query: 95  --AEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPGESFLVHGGS 149
             AE+  V A   + VP G+   D A    + C   T +  +   S + PG+   ++ G+
Sbjct: 117 GMAEQCIVTADYAVKVPEGL---DPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIY-GA 171

Query: 150 SGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCIN-YKTEDFVARVKEETGGK 207
            G+G  A+Q  K     +V     +++KLA+ K++GAD+ IN  + ED    ++E+TGG 
Sbjct: 172 GGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGA 231

Query: 208 GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL 252
              V+   +  + F + + ++   GR+  +G       +L+I  L
Sbjct: 232 HAAVV-TAVAKAAFNQAVDAVRAGGRVVAVGLPPE-SMDLSIPRL 274

Length = 338

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 74.6 bits (184), Expect = 5e-15
 Identities = 59/259 (22%), Positives = 101/259 (38%), Gaps = 53/259 (20%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA  +   G    +   E   P    ++ +++  A A   +D     G  P  +     
Sbjct: 1   MKAFAMLGIGKVGWI---EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGER----- 52

Query: 61  PGL----ECSGTILSVGKNVSRWKVGDQVCA----------------------LLGG--- 91
            G+    E  G +  VG  V  +K GD+V                        +LGG   
Sbjct: 53  HGMILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKF 112

Query: 92  -----GGYAEKVAVPAGQ--VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP---GE 141
                G +AE   V      + P+P G++ + A   P++     ST F  + L+    G+
Sbjct: 113 SNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMM----STGFHGAELANIKLGD 168

Query: 142 SFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV 200
           +  V  G   +G  A+   + +G  R+        ++ + K+ GA   ++YK  D V ++
Sbjct: 169 TVAVF-GIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQI 227

Query: 201 KEETGGKGVDVILDCMGAS 219
            + TGGKGVD ++   G  
Sbjct: 228 LKLTGGKGVDAVIIAGGGQ 246

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 74.3 bits (183), Expect = 5e-15
 Identities = 75/295 (25%), Positives = 116/295 (39%), Gaps = 45/295 (15%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATA-----LNRADTLQRKGSYPPPK 55
           M+A V         L +++V DP+    +VL+KV A       L+     +         
Sbjct: 1   MRAAVFRD----GPLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGP 56

Query: 56  GASPYP-----GLECSGTILSVGKNVS-RWKVGDQVCAL-----------------LGGG 92
                      G E  G ++  G     + KVG +V +L                    G
Sbjct: 57  SLMDLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPG 116

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
           GYAE + +    +L VP G+S++DAA    +A      V   + L+PGE  LV G    I
Sbjct: 117 GYAEYMLLSEALLLRVPDGLSMEDAALTEPLAVG-LHAV-RRARLTPGEVALVIGCGP-I 173

Query: 153 GTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTED---FVARVKEETGGKG 208
           G   I   K +GV  +  +  S E+ A+   +GAD+ ++   +      A      GG  
Sbjct: 174 GLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPK 233

Query: 209 VDVILDCMGASYF-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFA--KRLTVQ 260
             VI +C+GA    Q+ +      GR+ ++   G      NI    A  K LT+Q
Sbjct: 234 PAVIFECVGAPGLIQQIIEGAPPGGRIVVV---GVCMESDNIEPALAIRKELTLQ 285

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 73.6 bits (181), Expect = 9e-15
 Identities = 92/373 (24%), Positives = 149/373 (39%), Gaps = 73/373 (19%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG--------SYP 52
           M+A+V   P      +L+EV  P+    E+L+KVEA  +   D     G        + P
Sbjct: 1   MRAVVCHGPQD---YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQP 57

Query: 53  PPKGASPYPGLECSGTILSVGKNVSRW--KVGDQVCA----------------------- 87
           P       PG E  G ++ +G+       KVGD+V +                       
Sbjct: 58  PYVKPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKH 117

Query: 88  -LLG-----GGGYAEKVAVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPG 140
            L G      GG AE +  P    V  VP  +  +DA     +AC + +           
Sbjct: 118 DLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPLACALHAVDRANIKF--- 174

Query: 141 ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199
           +  +V  G+  +G   I   + +   ++ V    +E+LA+ +  GADV +N    D V +
Sbjct: 175 DDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEK 234

Query: 200 VKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLT 258
           +KE TGG G D+ ++  G  S  ++ L  +   GR F+         E    S+F   +T
Sbjct: 235 IKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGR-FV---------EF---SVFGDPVT 281

Query: 259 VQAAGLRSRSTENKALIV--SEVEKNVWPA----IAVGKV--KPVIYKYLPLCEAAEAHQ 310
           V  + +  R    K L V  S +    +P     IA G++    ++    PL +  EA +
Sbjct: 282 VDWSIIGDR----KELDVLGSHLGPYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFE 337

Query: 311 LMESSQHIGKIML 323
           LM       K++L
Sbjct: 338 LMARGDDSIKVVL 350

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 73.3 bits (181), Expect = 1e-14
 Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 37/212 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA+V+ +       +L+E+++  + + +V ++V  + LN  D L   G          +
Sbjct: 1   FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGK---GGIVRTF 57

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQVCALLGG--------GGYAEKVAVPAGQVLPVP 109
           P   G++ +GT++       R+K GD+V  +L G        GGYA++  V A  ++P+P
Sbjct: 58  PLVPGIDLAGTVVESSS--PRFKPGDRV--VLTGWGVGERHWGGYAQRARVKADWLVPLP 113

Query: 110 SGVSLKDAAAFPEVACTVWSTVFMTSHLS-----------PGESFLVHGGSSGIGTFAIQ 158
            G+S + A A          T   T+ L                 LV G + G+G+ A+ 
Sbjct: 114 EGLSARQAMAI--------GTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVA 165

Query: 159 MGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN 190
           +    G  V  + G  E+    + LGA   I+
Sbjct: 166 LLARLGYEVVASTGRPEEADYLRSLGASEIID 197

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score = 71.1 bits (175), Expect = 6e-14
 Identities = 67/236 (28%), Positives = 104/236 (44%), Gaps = 19/236 (8%)

Query: 12  PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILS 71
               +L E E P +KD EVL   EA  L+  D   R  S    +G     G + +  I S
Sbjct: 18  ESDFELVEEELPPLKDGEVL--CEALFLS-VDPYMRPYSKRLNEGD-TMIGTQVAKVIES 73

Query: 72  VGKNVSRWKVGDQVCALLG--------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEV 123
             KN S++ VG  V A  G        G    +   +PA     +P  ++L      P +
Sbjct: 74  --KN-SKFPVGTIVVASFGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLAL-GVLGMPGL 129

Query: 124 ACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL 183
             T +  +        GE+ +V+G +  +G+   Q+ K +G +V   AGS++K+A  K+L
Sbjct: 130 --TAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKEL 187

Query: 184 GADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
           G D   NYKT      +KE     G+D   D +G  +    L  +N  GR+ + G+
Sbjct: 188 GFDAVFNYKTVSLEEALKEAA-PDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGS 242

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score = 71.3 bits (175), Expect = 6e-14
 Identities = 76/276 (27%), Positives = 111/276 (40%), Gaps = 65/276 (23%)

Query: 1   MKAIVITQPGSP------EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP 54
           M+A V+ + G+P        L ++EVE       EVL+K+ A  L  +D     G  P  
Sbjct: 1   MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-- 58

Query: 55  KGASPYP---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------- 87
               P P   G E +G ++ VG+ V+  +VGD V             CA           
Sbjct: 59  ---RPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGA 115

Query: 88  -------LLGGG-----------------GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEV 123
                  LL GG                  +AE   V    V+ +   V L+ AA F   
Sbjct: 116 AANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCA 175

Query: 124 ACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCKD 182
             T    V  T+ + PG+S  V G   G+G  A+      G    V    +E+KLA+ ++
Sbjct: 176 VLTGVGAVVNTAGVRPGQSVAVVG-LGGVGLSALLGAVAAGASQVVAVDLNEDKLALARE 234

Query: 183 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218
           LGA   +N    + V +V+E TGG GVD   +  G+
Sbjct: 235 LGATATVNAGDPNAVEQVRELTGG-GVDYAFEMAGS 269

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 70.3 bits (173), Expect = 1e-13
 Identities = 89/354 (25%), Positives = 138/354 (38%), Gaps = 62/354 (17%)

Query: 12  PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQ--RKGSYPPPKGASPY-PGLECSGT 68
              L+++E   P+    EV ++V A  +  +D L   + G +   +   P   G E SG 
Sbjct: 6   AGDLRVEERPAPEPGPGEVRVRVAAGGICGSD-LHYYQHGGFGTVRLREPMVLGHEVSGV 64

Query: 69  ILSVGKNVSRWKVGDQV-------------CAL-----------LGG--------GGYAE 96
           + +VG  V+    G +V             C             LG         GG+ E
Sbjct: 65  VEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFRE 124

Query: 97  KVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG-IGTF 155
            + V A Q +P+P G+SL+  AA  E        V     L  G+  LV G  +G IG  
Sbjct: 125 YLVVDASQCVPLPDGLSLR-RAALAEPLAVALHAVNRAGDL-AGKRVLVTG--AGPIGAL 180

Query: 156 AIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG-VDVIL 213
            +   +  G   +  T  ++  LAV + +GAD  +N   +   A        KG  DV+ 
Sbjct: 181 VVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAA----YAADKGDFDVVF 236

Query: 214 DCMGASYFQRN-LGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK 272
           +  GA     + L  +   G +  +G   G    L + +L AK L ++ +    R  +  
Sbjct: 237 EASGAPAALASALRVVRPGGTVVQVGM-LGGPVPLPLNALVAKELDLRGS---FRFDDEF 292

Query: 273 ALIVSEVEKNVWPAIAVGK--VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324
           A  V          +A G+  V+P+I    PL EAAEA  L        K+ L 
Sbjct: 293 AEAVR--------LLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLS 338

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 70.6 bits (173), Expect = 1e-13
 Identities = 67/248 (27%), Positives = 105/248 (42%), Gaps = 45/248 (18%)

Query: 15  LQLQEVEDPQIKDDEVLIKVEATALNRADT---LQRKGSYPPPKGASPYP---GLECSGT 68
           L++++V  P +K DE+LI+V+A  +  +D       K  Y    G + +P   G E SG 
Sbjct: 39  LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGV 98

Query: 69  ILSVGKNVSRWKVGDQVCA------------------------LLG---GGGYAEKVAVP 101
           +   GKNV  ++ GD V A                         LG    G +AE +AV 
Sbjct: 99  VEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVN 158

Query: 102 A------GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS-HLSPGESFLVHGGSSGIGT 154
           A       ++  + S     +A A  E     ++ +F+      PG   +V+G    IG 
Sbjct: 159 ARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGP-IGL 217

Query: 155 FAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN---YKTEDFVARVKEETGGKGVD 210
            AI + K  G  +V     SEE+  + K++GAD   N    +      +V E T G G D
Sbjct: 218 AAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGAD 277

Query: 211 VILDCMGA 218
           + ++  GA
Sbjct: 278 IQVEAAGA 285

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 65.0 bits (159), Expect = 2e-13
 Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 30/110 (27%)

Query: 27  DDEVLIKVEATALNRADTLQRKGSYPPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQV 85
             EVL++V+A  +  +D    +G  PP K   P   G E +G +  VG  V+  KVGD+V
Sbjct: 1   PGEVLVRVKAAGICGSDLHIYRGEPPPVKL--PLILGHEGAGIVEEVGPGVTGLKVGDRV 58

Query: 86  CA------------------------LLG---GGGYAEKVAVPAGQVLPV 108
                                      LG    GG+AE V VPA  ++P+
Sbjct: 59  VVYPLIPCGKCAACREGRENLCPNGKFLGVHLDGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score = 65.8 bits (161), Expect = 5e-12
 Identities = 86/326 (26%), Positives = 128/326 (39%), Gaps = 70/326 (21%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           KA V  + G P V++  EV  P  K +EV IK+ AT++   D L  +G       A+ +P
Sbjct: 4   KAAVAWEAGKPLVIEEIEVAPP--KANEVRIKMLATSVCHTDILAIEG-----FKATLFP 56

Query: 62  ---GLECSGTILSVGKNVSRWKVGDQVCALLGG------------------GGYAEKVAV 100
              G E +G + SVG+ V+  K GD+V  L  G                      E   +
Sbjct: 57  VILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLM 116

Query: 101 PAGQVLPVPSG----------------------VSLKDAAAFPEVACTV---WST----V 131
           P G       G                      V+  D AA  E  C +   +ST     
Sbjct: 117 PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAA 176

Query: 132 FMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI 189
           + T+ + PG +  V G G+ G+   AI   K  G  R+     +E+K    K+ GA   I
Sbjct: 177 WNTAKVEPGSTVAVFGLGAVGLS--AIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFI 234

Query: 190 NYK--TEDFVARVKEETGGKGVDVILDCMGASYFQRNL--GSLNIDGRLFIIGTQGGAKT 245
           N K   +     ++E TGG GVD   +C G +         +    G   ++G   GA+ 
Sbjct: 235 NPKDSDKPVSEVIREMTGG-GVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAEL 293

Query: 246 ELNITSLFAKRLTVQAA---GLRSRS 268
            +    L   R T + +   G +SRS
Sbjct: 294 SIRPFQLILGR-TWKGSFFGGFKSRS 318

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 64.1 bits (156), Expect = 2e-11
 Identities = 68/290 (23%), Positives = 111/290 (38%), Gaps = 67/290 (23%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           ++ ++    G+P  L+   V DP     EV++ ++A  +   D   R+G          +
Sbjct: 2   VRGVIARSKGAPVELETIVVPDP--GPGEVIVDIQACGVCHTDLHYREGGI-----NDEF 54

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV---------------------C---------- 86
           P   G E +G + +VG+ V+    GD V                     C          
Sbjct: 55  PFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKM 114

Query: 87  ---------ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVA----CTVWS---T 130
                      LG G +AEK  V AGQ   V       D AA P  A    C V +    
Sbjct: 115 TLTDGTELSPALGIGAFAEKTLVHAGQCTKV-------DPAADPAAAGLLGCGVMAGLGA 167

Query: 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI 189
              T  +  G+S  V G   G+G  AI      G  ++      + KL   ++ GA   +
Sbjct: 168 AVNTGGVKRGDSVAVIG-CGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTV 226

Query: 190 NYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIG 238
           N    D V  ++  TGG G DV++D +G    +++   + ++ G + ++G
Sbjct: 227 NSSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVG 276

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score = 61.6 bits (150), Expect = 1e-10
 Identities = 79/318 (24%), Positives = 117/318 (36%), Gaps = 73/318 (22%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           KA V+  PG P  ++  E++DP  K  EVL+K+ A+ L  +D     G  P P+    YP
Sbjct: 3   KAAVLWGPGQPWEVEEIELDDP--KAGEVLVKLVASGLCHSDEHLVTGDLPMPR----YP 56

Query: 62  ---GLECSGTILSVGKNVSRWKVGDQV-------------CA------------LLGG-- 91
              G E +G +  VG  V+  K GD V             C+            LL G  
Sbjct: 57  ILGGHEGAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQ 116

Query: 92  ---------------------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV--- 127
                                G ++E   VP   V+ +   + L  A     V C V   
Sbjct: 117 ISDGTYRFHADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACL---VGCGVPTG 173

Query: 128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGAD 186
           W +    + + PG++ +V  G  G+G  A+Q     G R V      E K       GA 
Sbjct: 174 WGSAVNIADVRPGDTVVVM-GIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGAT 232

Query: 187 VCINYKTEDFVARVKEETGGKGVD---VILDCMGASYFQRNLGSLNIDGRLFIIG----T 239
                  E+ V  V+E T G+G D   + +  +   +    L +    GR+ + G     
Sbjct: 233 HAFA-SMEEAVQLVRELTNGQGADKTIITVGEVDGEHIAEALSATRKGGRVVVTGLGPMA 291

Query: 240 QGGAKTELNITSLFAKRL 257
               K  L   +L  K L
Sbjct: 292 DVDVKVNLFELTLLQKEL 309

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 59.8 bits (145), Expect = 4e-10
 Identities = 54/189 (28%), Positives = 81/189 (42%), Gaps = 36/189 (19%)

Query: 62  GLECSGTILSVGKNVSRWKVGDQV----------CALLGGGGY----------------- 94
           G EC+G I  VG  V    VGD+V          C L   G Y                 
Sbjct: 78  GHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGS 137

Query: 95  -AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIG 153
            A +V  PA     +P  VSL++ A    ++  V +     +++ P  + LV G    IG
Sbjct: 138 LANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHAC--RRANIGPETNVLVMGAGP-IG 194

Query: 154 TFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGAD--VCINYKTEDFVARVKE--ETGGKG 208
              +   +  G  R+ +    +E+L+V K LGAD  V ++   ED  + V+E  +  G G
Sbjct: 195 LVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGG 254

Query: 209 VDVILDCMG 217
           +DV  DC+G
Sbjct: 255 IDVSFDCVG 263

Length = 364

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 59.5 bits (144), Expect = 5e-10
 Identities = 71/292 (24%), Positives = 116/292 (39%), Gaps = 51/292 (17%)

Query: 6   ITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLEC 65
           +T+PG P  +    VE P++   +V++KV    +   D                  G E 
Sbjct: 4   MTEPGKP--MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEI 61

Query: 66  SGTILSVGKNVSRWKVGDQV----------CALLG-----------------GGGYAEKV 98
           SG ++  G   + W +G  V          C L                    GG+A  +
Sbjct: 62  SGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHI 120

Query: 99  AVPAGQVLPV------PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
            VPA  +  V       +G+ L+  +   +   T +    + + L  G+  +V  G+ G+
Sbjct: 121 VVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAA-VQAGLKKGDLVIVI-GAGGV 178

Query: 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR-VKEETGG----K 207
           G + +Q  K  G  V       EKL + K  GAD+ +N K  D  AR VK+        +
Sbjct: 179 GGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPK--DKSAREVKKLIKAFAKAR 236

Query: 208 GVD----VILDCMGASYFQRN-LGSLNIDGRLFIIGTQGGAKTELNITSLFA 254
           G+      I +C G+   Q + L  L+  G L ++G    AKTE  +++L A
Sbjct: 237 GLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGY-TMAKTEYRLSNLMA 287

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 59.4 bits (144), Expect = 6e-10
 Identities = 76/301 (25%), Positives = 127/301 (42%), Gaps = 61/301 (20%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MK+IVI +P S   L ++E   PQ    EV +KV+   +  +D+   +G  P  K    Y
Sbjct: 1   MKSIVIEKPNS---LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAK----Y 53

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------LG--- 90
           P   G E  G I +VG+ V   ++G++V             C++           LG   
Sbjct: 54  PRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHR 113

Query: 91  GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG-GS 149
            GG++E   VPA     +P  ++ + A        T+ + V   +  +  +  L++G G 
Sbjct: 114 DGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPF--TIAANVTGRTGPTEQDVALIYGAGP 171

Query: 150 SGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 208
            G+    +  G    V+  + A   +E+LA+ K+ GAD  IN   E     + E    KG
Sbjct: 172 VGLTIVQVLKG-VYNVKAVIVADRIDERLALAKESGADWVINNAQEP----LGEALEEKG 226

Query: 209 VD--VILDCMG-ASYFQRNLGSLNIDGRLFIIG---------TQGGAKTELNITSLFAKR 256
           +   +I+D     S  +  +   +   R+ ++G          QG    EL   S+F+ R
Sbjct: 227 IKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKEL---SIFSSR 283

Query: 257 L 257
           L
Sbjct: 284 L 284

Length = 339

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 59.1 bits (144), Expect = 7e-10
 Identities = 85/383 (22%), Positives = 144/383 (37%), Gaps = 95/383 (24%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDE-VLIKVEATALNRADTLQRKGSYPPPKGASP 59
           MKA+V   PG+  V   ++V DP+I+     ++++  TA+  +D    +G      G   
Sbjct: 1   MKAVVYGGPGNVAV---EDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGAEPG--- 54

Query: 60  YP-GLECSGTILSVGKNVSRWKVGDQVC-------------------------------- 86
              G E  G +  VG  V   KVGD+V                                 
Sbjct: 55  LVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGA 114

Query: 87  ---ALLGG--GGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVWSTVFM---TSH 136
                +G   GG AE + VP     +L +P     K+   +  ++  ++ T +     + 
Sbjct: 115 YGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLS-DIFPTGWHGLELAG 173

Query: 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTED 195
           + PG++  V  G+  +G  A      +G  RV+V     E+L + + +GA + I++   D
Sbjct: 174 VQPGDTVAVF-GAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IPIDFSDGD 231

Query: 196 FVARVKEETGGKGVDVILDCMGASYFQRNLGS--------------LNIDGRLFIIG--- 238
            V ++     G GVD  +DC+G  Y  R+ G                   G + I+G   
Sbjct: 232 PVEQILGLEPG-GVDRAVDCVG--YEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYV 288

Query: 239 -------TQGGAKTELNI--TSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV 289
                       + EL+     L+AK L+        +   N+ L            I  
Sbjct: 289 AEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQAPVKKY-NRQLR---------DLILA 338

Query: 290 GKVKP--VIYKYLPLCEAAEAHQ 310
           G+ KP  V+   + L +A EA+ 
Sbjct: 339 GRAKPSFVVSHVISLEDAPEAYA 361

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 61/231 (26%), Positives = 94/231 (40%), Gaps = 21/231 (9%)

Query: 45  LQRKGSYPPPKGASPY-PGLECSGTILSVGKNV----SRWKVGDQVCALLGGGGYAEKVA 99
             R   +       P+ PG   +G    V K V      +KVGD V    G  G+ E   
Sbjct: 54  RGRMKGHDDSLYLPPFKPGEVITG--YGVAKVVDSGNPDFKVGDLV---WGFTGWEEYSL 108

Query: 100 VPAGQVLPV--PSGVSLKD-AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFA 156
           +P GQ L     + V L            T ++  +       GE+  V   S  +G   
Sbjct: 109 IPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLV 168

Query: 157 IQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTE-DFVARVKEETGGKGVDVILD 214
            Q+ K +G  V  +AGS+EK+ + K+ LG D   NYK E D  A +K      G+D+  D
Sbjct: 169 GQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYF-PNGIDIYFD 227

Query: 215 CMGASYFQRNLGSLNIDGRLFIIG-----TQGGAKTELNITSLFAKRLTVQ 260
            +G       L ++N+ GR+   G          +   N+ ++  KR+ +Q
Sbjct: 228 NVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQ 278

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score = 57.7 bits (139), Expect = 2e-09
 Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 19/231 (8%)

Query: 15  LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74
            +L+ VE P + + EVL+  EA  L+  D   R  +    +G +   G + +  + S  K
Sbjct: 19  FELKTVELPPLNNGEVLL--EALFLS-VDPYMRVAAKRLKEGDTMM-GQQVARVVES--K 72

Query: 75  NVSRWKVGDQVCALLG-------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV 127
           NV+    G  V A  G        G   EK+       LP+   +        P +  T 
Sbjct: 73  NVA-LPKGTIVLASPGWTSHSISDGKDLEKLLTEWPDTLPLSLALG---TVGMPGL--TA 126

Query: 128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV 187
           +  +     +  GE+ +V+  +  +G+   Q+ K +G +V   AGS+EK+A  K LG DV
Sbjct: 127 YFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDV 186

Query: 188 CINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
             NYKT   +    ++    G D   D +G  +    +G +   GR+ I G
Sbjct: 187 AFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 237

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score = 56.9 bits (138), Expect = 3e-09
 Identities = 97/365 (26%), Positives = 153/365 (41%), Gaps = 60/365 (16%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+A VI  PG    ++++EV DP I +  + +I+V AT +  +D    +G   P +  +P
Sbjct: 1   MRATVIHGPGD---IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRG-VSPTRAPAP 56

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQV---------------------CALLG------GG 92
             G E  G +  VG  V+  K GD V                     C   G       G
Sbjct: 57  I-GHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDG 115

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH-------LSPGESFLV 145
           G  E V VP      V    S  D          + S V  T H       + PG + +V
Sbjct: 116 GQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLAL-SDVMGTGHHAAVSAGVRPGSTVVV 174

Query: 146 HGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET 204
            G    +G  A+   K  G  R+   +  E++ A+ ++ GA   +  + E+ VARV+E T
Sbjct: 175 VG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVRELT 233

Query: 205 GGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGT-QGGAKTELNITSLFAKRLTVQAA 262
           GG G D +L+C+G     ++ +      GR+  +G   GG   EL++  LF + + + A 
Sbjct: 234 GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGG--VELDVRELFFRNVGL-AG 290

Query: 263 GLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGK 320
           G          L+           +  G++ P  V    LPL E AE ++ M+  + I K
Sbjct: 291 GPAPVRRYLPELL---------DDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-K 340

Query: 321 IMLVP 325
           ++L P
Sbjct: 341 VLLRP 345

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 56.0 bits (135), Expect = 6e-09
 Identities = 61/222 (27%), Positives = 92/222 (41%), Gaps = 43/222 (19%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           MK++V    G    +++ E   P+IK  D+VL+KV ++ L  +D + R        GA  
Sbjct: 1   MKSVVNDTDGI---VRVAESPIPEIKHQDDVLVKVASSGLCGSD-IPRIFK----NGAHY 52

Query: 60  YP---GLECSGTILSVGKNVSRWKVGDQV-CALL-------------------------- 89
           YP   G E SG + +VG  V     GD V C  L                          
Sbjct: 53  YPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSR 112

Query: 90  GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGS 149
             GG AE + V    +  +P+ + ++D A    +  TV    F  +    G++ ++ G  
Sbjct: 113 RDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEPI--TVGLHAFHLAQGCEGKNVIIIGAG 170

Query: 150 SGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCIN 190
           + IG  AIQ     G + V     + EKLA+ K LGA    N
Sbjct: 171 T-IGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFN 211

Length = 347

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 53.6 bits (129), Expect = 4e-08
 Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 54/253 (21%)

Query: 28  DEVLIKVEATALNRADTLQRKGSYPPPKGASPYP---GLECSGTILSVGKNVSRWKVGDQ 84
           ++V+IKV    +   D  Q K       G S YP   G E  G ++ VG +VS++ VGD 
Sbjct: 35  EDVVIKVIYCGICHTDLHQIKNDL----GMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDI 90

Query: 85  V-CALLGG----------------------------------GGYAEKVAVPAGQVLPVP 109
           V   ++ G                                  GG+A  + V    V+ +P
Sbjct: 91  VGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIP 150

Query: 110 SGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG--GSSGIGTFAIQMGKCQGVRV 167
            G++ + AA       TV+S +   SH    +S L  G  G  G+G   +++ K  G  V
Sbjct: 151 EGMAPEQAAPLLCAGVTVYSPL---SHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHV 207

Query: 168 FVTAGSEEKLA-VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNL 225
            V + S++K     + LGAD   +Y      A ++E      +D I+D +   +  +  L
Sbjct: 208 TVISSSDKKREEALEHLGAD---DYLVSSDAAEMQE--AADSLDYIIDTVPVFHPLEPYL 262

Query: 226 GSLNIDGRLFIIG 238
             L +DG+L ++G
Sbjct: 263 SLLKLDGKLILMG 275

Length = 357

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 6/127 (4%)

Query: 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVA 198
           G+S  V   S  +G    Q+ K  G  V  +AGS +K+ + K+ LG D   NYK E  + 
Sbjct: 159 GDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLD 218

Query: 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG-----TQGGAKTELNITSLF 253
              +    +G+D+  D +G       L ++ I GR+ + G     +   ++   N+ +L 
Sbjct: 219 AALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLI 278

Query: 254 AKRLTVQ 260
           +KR+ +Q
Sbjct: 279 SKRIRMQ 285

Length = 348

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 51.9 bits (124), Expect = 2e-07
 Identities = 58/215 (26%), Positives = 88/215 (40%), Gaps = 42/215 (19%)

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCA--LLGG--------------------------- 91
           PG E  G    VGKNV+++K GD+V    ++G                            
Sbjct: 64  PGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSS 123

Query: 92  ------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV 145
                 GGY++ + V    VL +P G+     A       TV+S +            L 
Sbjct: 124 DGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLG 183

Query: 146 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEET 204
             G  G+G  A+++GK  G+RV V + S EK     D LGAD   ++       ++KE  
Sbjct: 184 VNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGAD---SFLVTTDSQKMKEAV 240

Query: 205 GGKGVDVILDCMGASYFQRNLGS-LNIDGRLFIIG 238
           G   +D I+D + A +    L S L + G+L  +G
Sbjct: 241 G--TMDFIIDTVSAEHALLPLFSLLKVSGKLVALG 273

Length = 375

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score = 50.5 bits (121), Expect = 4e-07
 Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 5/86 (5%)

Query: 136 HLSPG--ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGADVCINY 191
           H++PG  ++ +V G +   G+ A Q+G+  G  RV    GS+EK  + K +LG D  INY
Sbjct: 149 HITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINY 208

Query: 192 KTEDFVARVKEETGGKGVDVILDCMG 217
           KT++   R++ E   +GVDV  D +G
Sbjct: 209 KTDNVAERLR-ELCPEGVDVYFDNVG 233

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 49.5 bits (118), Expect = 1e-06
 Identities = 63/252 (25%), Positives = 103/252 (40%), Gaps = 50/252 (19%)

Query: 27  DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP---GLECSGTILSVGKNVSRWKVGD 83
           D++V +K+    +  +D    K  +    G + YP   G E  G +  +GKNV ++K GD
Sbjct: 37  DEDVTVKILYCGVCHSDLHTIKNEW----GFTRYPIVPGHEIVGIVTKLGKNVKKFKEGD 92

Query: 84  QV-CALLGG----------------------------------GGYAEKVAVPAGQVLPV 108
           +V   ++ G                                  GGY++ + V    VL  
Sbjct: 93  RVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRF 152

Query: 109 PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVF 168
           P  + L   A       TV+S +       PG+   V  G  G+G  A+++GK  G++V 
Sbjct: 153 PDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGV-AGLGGLGHVAVKIGKAFGLKVT 211

Query: 169 VTAGSEEKLA-VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLG 226
           V + S  K       LGAD      T+    ++K   G   +D I+D + A +     LG
Sbjct: 212 VISSSSNKEDEAINRLGAD-SFLVSTDP--EKMKAAIG--TMDYIIDTVSAVHALGPLLG 266

Query: 227 SLNIDGRLFIIG 238
            L ++G+L  +G
Sbjct: 267 LLKVNGKLITLG 278

Length = 360

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score = 49.1 bits (117), Expect = 1e-06
 Identities = 69/267 (25%), Positives = 101/267 (37%), Gaps = 56/267 (20%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
           +A V    G P  L+++EV+    +  EVL+++ AT +   D     G+   P+G  P  
Sbjct: 3   RAAVAWAAGQP--LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGA--DPEGVFPVI 58

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV----------CALLGGGGYAEKVAVPAGQ------ 104
            G E +G + +VG+ V+  KVGD V          C     G     VAV   Q      
Sbjct: 59  LGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMP 118

Query: 105 --------------------------VLPVPSGVSLKDAAAFPEV---ACTVWS---TVF 132
                                     V+P  S   +  AA   EV    C V +    V 
Sbjct: 119 DGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVL 178

Query: 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191
            T+ +  G++  V  G  GIG   IQ  +     R+     +  K  + K LGA  C+N 
Sbjct: 179 NTAKVEEGDTVAVF-GLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNP 237

Query: 192 KTEDF-VARVKEETGGKGVDVILDCMG 217
              D  +  V  E    GVD   +C+G
Sbjct: 238 NDYDKPIQEVIVEITDGGVDYSFECIG 264

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 78/336 (23%), Positives = 122/336 (36%), Gaps = 61/336 (18%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+V+        L+++++  P+    E L++V    +   D    KG YP P G    
Sbjct: 1   MKALVLDGGL---DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYPFP-GV--- 53

Query: 61  PGLECSGTILS------VGKNV-SRWKVGDQVCAL--------------LG----GGGYA 95
           PG E  G +        VGK V     +    C                LG     G +A
Sbjct: 54  PGHEFVGIVEEGPEAELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFA 113

Query: 96  EKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF 155
           E + +P   +  VP  V   + A F E        +     ++PG+   V  G   +G  
Sbjct: 114 EYLTLPLENLHVVPDLVP-DEQAVFAEPLAAALEILEQ-VPITPGDKVAVL-GDGKLGLL 170

Query: 156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215
             Q+    G  V +     EKLA+ + LG +  +           + E+ G G DV+++ 
Sbjct: 171 IAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPD---------EAESEGGGFDVVVEA 221

Query: 216 MG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKAL 274
            G  S  +  L  +   G + +  T  G     ++T      +T+   G R       AL
Sbjct: 222 TGSPSGLELALRLVRPRGTVVLKSTYAG-PASFDLTKAVVNEITL--VGSRCGPFA-PAL 277

Query: 275 IVSEVEKNVWPAIAVGKV--KPVIYKYLPLCEAAEA 308
                       +  G V   P+I    PL EA EA
Sbjct: 278 ----------RLLRKGLVDVDPLITAVYPLEEALEA 303

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 46.8 bits (112), Expect = 7e-06
 Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 5/88 (5%)

Query: 2  KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
          KA V  + G P  L ++EVE    K  EV IK+ AT +   D     G+   P+G  P  
Sbjct: 4  KAAVAWEAGKP--LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGA--DPEGLFPVI 59

Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCAL 88
           G E +G + SVG+ V+  K GD V  L
Sbjct: 60 LGHEGAGIVESVGEGVTSVKPGDHVIPL 87

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 10/90 (11%)

Query: 2  KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
          KA V+ +P  P    ++E+E    K  EV IK+ AT + R+D     G        +P+P
Sbjct: 9  KAAVLWEPKKP--FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL-----VTPFP 61

Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCAL 88
             G E +G + SVG+ V+  K GD+V  L
Sbjct: 62 VILGHEAAGIVESVGEGVTTVKPGDKVIPL 91

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 62/286 (21%), Positives = 94/286 (32%), Gaps = 55/286 (19%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP-PPKGASP 59
           MKAI +  PG P V ++ ++ +P+    EVL++     +   D     G Y   P G   
Sbjct: 1   MKAIAVK-PGKPGV-RVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPG-ED 57

Query: 60  Y--PGLECSGTILSVGKNVSRWKVGDQVCALL---------------------------- 89
           +   G E  G +  VG   S    GD V   +                            
Sbjct: 58  FLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGI 116

Query: 90  -GGGGY-AEKVAVPAGQVLPVPSGVSLKDAAAFPE---VACTVWSTVFMTSHLSP---GE 141
            G  G+  E        ++ VP   SL D     E   V               P     
Sbjct: 117 KGLHGFMREYFVDDPEYLVKVPP--SLADVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPR 174

Query: 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTA---GSEEKLAVCKDLGADVCINYKTEDFVA 198
             LV G    IG  A  + + +G  V+V       + K  + ++LGA   +N        
Sbjct: 175 RALVLGAGP-IGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTP--- 229

Query: 199 RVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA 243
            V E       D+I++  G        L +L  +G + + G  GG 
Sbjct: 230 -VAEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGG 274

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase

 Score = 44.7 bits (106), Expect = 4e-05
 Identities = 65/251 (25%), Positives = 101/251 (40%), Gaps = 54/251 (21%)

Query: 14  VLQLQEVEDPQIKDDEVLIKVEATALNRAD-TLQRKGSYPP--PKGASPYP---GLECSG 67
            L+L++ E P+I DDE+L++V + +L  +   L  +GS     P   +  P   G E +G
Sbjct: 13  DLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAG 72

Query: 68  TILSVGKNVS-RWKVGDQV-----CALLGG-----------GGYAEKVAVPA----GQVL 106
           TIL VGK    ++K G +        L  G           GG A    +P        L
Sbjct: 73  TILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCL 132

Query: 107 PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGE-------------SFLVHGGSSGIG 153
            +  G    +A+    ++C V        HL PGE             + L   G  G+ 
Sbjct: 133 LIYEGDGYAEASLVEPLSC-VIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLM 191

Query: 154 T--FAIQMGKCQGVRVFVTAGSEEKLAVCKDL--------GADV-CINYKTED-FVARVK 201
              +AI         + VT  ++E+LA  + L        G ++  +N  T D   A + 
Sbjct: 192 AIDYAIHGPIGPS-LLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLM 250

Query: 202 EETGGKGVDVI 212
           E TGG+G D +
Sbjct: 251 ELTGGQGFDDV 261

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score = 41.4 bits (97), Expect = 3e-04
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 6/90 (6%)

Query: 2  KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
          +A V    G   V++  EV  PQ    E+ IKV +T+L R+D    +     P+      
Sbjct: 14 RAAVAWGAGEALVMEEVEVSPPQPL--EIRIKVVSTSLCRSDLSAWESQALFPR----IF 67

Query: 62 GLECSGTILSVGKNVSRWKVGDQVCALLGG 91
          G E SG + S+G+ V+ ++ GD V  +  G
Sbjct: 68 GHEASGIVESIGEGVTEFEKGDHVLTVFTG 97

Length = 378

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 40.6 bits (95), Expect = 6e-04
 Identities = 50/175 (28%), Positives = 68/175 (38%), Gaps = 17/175 (9%)

Query: 74  KNVSRWKVG----DQVCALLGGGGYAEKVAVPAG-QVLPVPSGVSLKDAAAFPEVACTVW 128
           K  S  K G    D    L GG  YAE   +PAG  ++PVP    L DA A P   C   
Sbjct: 53  KCDSLRKYGHEALDSGWPLSGG--YAEHCHLPAGTAIVPVPD--DLPDAVAAP-AGCATA 107

Query: 129 STVFMTSHLSP--GESFLVHG-GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 185
           + +          G   LV G G  G+ T A         RV     S ++  +    GA
Sbjct: 108 TVMAALEAAGDLKGRRVLVVGAGMLGL-TAAAAAAAAGAARVVAADPSPDRRELALSFGA 166

Query: 186 DVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGT 239
                 +      R      G+GVDV L+  GA+   +  L SL++ G   + G+
Sbjct: 167 TALAEPEVLA--ERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGS 219

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 42/168 (25%), Positives = 61/168 (36%), Gaps = 9/168 (5%)

Query: 92  GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
           GG+     V   Q +P P     +   AF E              L  G+   V  G   
Sbjct: 124 GGFTRYKVVDTAQCIPYPEKAD-EKVMAFAEPLAVAIHAAHQAGDLQ-GKRVFV-SGVGP 180

Query: 152 IGTFAIQMGKCQGVRVFVTAG-SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210
           IG   +   K  G    V A  S   L++ +++GAD  +N + +D     K E G    D
Sbjct: 181 IGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDL-DHYKAEKG--YFD 237

Query: 211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRL 257
           V  +  G  S     L      G +  +G  GGA  E  + +L  K +
Sbjct: 238 VSFEVSGHPSSINTCLEVTRAKGVMVQVG-MGGAPPEFPMMTLIVKEI 284

Length = 343

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 9/87 (10%)

Query: 2  KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
          KA V  + G P V++  EV  PQ    EV IK+  T+L   D    +     P     +P
Sbjct: 4  KAAVAWEAGKPLVIEEVEVAPPQAM--EVRIKILHTSLCHTDVYFWEAKGQTPL----FP 57

Query: 62 ---GLECSGTILSVGKNVSRWKVGDQV 85
             G E +G + SVG+ V+  K GD V
Sbjct: 58 RILGHEAAGIVESVGEGVTDLKPGDHV 84

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	325
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	100.0
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	100.0
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.97
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.97
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.74
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.74
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.56
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.4
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.34
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.7
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.63
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.48
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.29
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	98.25
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.22
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	98.08
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	98.08
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.04
PLN02494	477	adenosylhomocysteinase	98.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.93
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.88
PRK08324	681	short chain dehydrogenase; Validated	97.87
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.82
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.81
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.79
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.75
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	97.69
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.68
PRK12742	237	oxidoreductase; Provisional	97.61
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.58
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.58
PLN03209	576	translocon at the inner envelope of chloroplast su	97.56
PRK06198	260	short chain dehydrogenase; Provisional	97.53
PRK05693	274	short chain dehydrogenase; Provisional	97.53
PRK05993	277	short chain dehydrogenase; Provisional	97.48
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.41
PRK06139	330	short chain dehydrogenase; Provisional	97.4
PRK07060	245	short chain dehydrogenase; Provisional	97.38
PRK08177	225	short chain dehydrogenase; Provisional	97.37
PRK08265	261	short chain dehydrogenase; Provisional	97.36
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	97.33
PRK07806	248	short chain dehydrogenase; Provisional	97.32
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	97.27
PRK07109	334	short chain dehydrogenase; Provisional	97.25
PRK06182	273	short chain dehydrogenase; Validated	97.25
PRK05872	296	short chain dehydrogenase; Provisional	97.25
PRK12939	250	short chain dehydrogenase; Provisional	97.24
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.22
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.18
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.18
PRK08017	256	oxidoreductase; Provisional	97.16
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.15
PLN02780	320	ketoreductase/ oxidoreductase	97.13
PRK06953	222	short chain dehydrogenase; Provisional	97.12
PRK06128	300	oxidoreductase; Provisional	97.11
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.11
PRK12367	245	short chain dehydrogenase; Provisional	97.07
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.07
PRK12829	264	short chain dehydrogenase; Provisional	97.06
PRK07831	262	short chain dehydrogenase; Provisional	97.06
PRK06484	520	short chain dehydrogenase; Validated	97.05
PRK05866	293	short chain dehydrogenase; Provisional	97.03
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.03
PRK08339	263	short chain dehydrogenase; Provisional	97.02
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.02
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.02
PRK06057	255	short chain dehydrogenase; Provisional	97.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	96.99
PRK07904	253	short chain dehydrogenase; Provisional	96.99
PRK06196	315	oxidoreductase; Provisional	96.99
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	96.98
PRK07814	263	short chain dehydrogenase; Provisional	96.98
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.98
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.97
PRK06841	255	short chain dehydrogenase; Provisional	96.96
COG2910	211	Putative NADH-flavin reductase [General function p	96.96
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.95
PRK07832	272	short chain dehydrogenase; Provisional	96.95
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.94
PRK09291	257	short chain dehydrogenase; Provisional	96.94
PRK06949	258	short chain dehydrogenase; Provisional	96.93
PRK07825	273	short chain dehydrogenase; Provisional	96.93
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.93
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.92
PRK06500	249	short chain dehydrogenase; Provisional	96.92
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.92
PRK06180	277	short chain dehydrogenase; Provisional	96.9
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.9
PRK06194	287	hypothetical protein; Provisional	96.9
PRK05854	313	short chain dehydrogenase; Provisional	96.89
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	96.88
PRK05867	253	short chain dehydrogenase; Provisional	96.87
PRK08267	260	short chain dehydrogenase; Provisional	96.85
PRK08628	258	short chain dehydrogenase; Provisional	96.85
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.84
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.84
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	96.84
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.82
PRK07478	254	short chain dehydrogenase; Provisional	96.81
PRK07890	258	short chain dehydrogenase; Provisional	96.8
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	96.8
TIGR00438	188	rrmJ cell division protein FtsJ.	96.8
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	96.8
PRK07453	322	protochlorophyllide oxidoreductase; Validated	96.79
PRK12937	245	short chain dehydrogenase; Provisional	96.78
PRK07576	264	short chain dehydrogenase; Provisional	96.78
PRK04148	134	hypothetical protein; Provisional	96.78
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.77
PRK06398	258	aldose dehydrogenase; Validated	96.76
PRK06720	169	hypothetical protein; Provisional	96.75
PRK05884	223	short chain dehydrogenase; Provisional	96.74
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	96.74
PRK07063	260	short chain dehydrogenase; Provisional	96.73
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.72
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.72
PRK06172	253	short chain dehydrogenase; Provisional	96.72
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.72
PRK09072	263	short chain dehydrogenase; Provisional	96.71
PRK06181	263	short chain dehydrogenase; Provisional	96.71
PRK07062	265	short chain dehydrogenase; Provisional	96.71
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	96.71
PRK05876	275	short chain dehydrogenase; Provisional	96.7
PRK06484	520	short chain dehydrogenase; Validated	96.7
PRK07677	252	short chain dehydrogenase; Provisional	96.7
PRK07067	257	sorbitol dehydrogenase; Provisional	96.69
PRK12828	239	short chain dehydrogenase; Provisional	96.69
PRK08213	259	gluconate 5-dehydrogenase; Provisional	96.69
PRK07523	255	gluconate 5-dehydrogenase; Provisional	96.69
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.68
PRK10538	248	malonic semialdehyde reductase; Provisional	96.67
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.67
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.67
PRK08862	227	short chain dehydrogenase; Provisional	96.67
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	96.66
PRK06138	252	short chain dehydrogenase; Provisional	96.66
PRK08340	259	glucose-1-dehydrogenase; Provisional	96.65
PRK08303	305	short chain dehydrogenase; Provisional	96.64
KOG0725	270	consensus Reductases with broad range of substrate	96.64
PRK06114	254	short chain dehydrogenase; Provisional	96.63
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.63
PRK08589	272	short chain dehydrogenase; Validated	96.63
PRK07774	250	short chain dehydrogenase; Provisional	96.63
CHL00194	317	ycf39 Ycf39; Provisional	96.62
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	96.62
PRK06101	240	short chain dehydrogenase; Provisional	96.62
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.62
PRK06125	259	short chain dehydrogenase; Provisional	96.61
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	96.61
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	96.61
PRK07035	252	short chain dehydrogenase; Provisional	96.6
PRK06482	276	short chain dehydrogenase; Provisional	96.6
PRK07024	257	short chain dehydrogenase; Provisional	96.6
PRK07326	237	short chain dehydrogenase; Provisional	96.58
PRK07454	241	short chain dehydrogenase; Provisional	96.58
PRK08643	256	acetoin reductase; Validated	96.56
PRK08264	238	short chain dehydrogenase; Validated	96.56
PRK08226	263	short chain dehydrogenase; Provisional	96.56
PRK08085	254	gluconate 5-dehydrogenase; Provisional	96.56
KOG1208	314	consensus Dehydrogenases with different specificit	96.56
PRK06197	306	short chain dehydrogenase; Provisional	96.56
PRK05717	255	oxidoreductase; Validated	96.55
PRK09186	256	flagellin modification protein A; Provisional	96.54
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.53
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	96.52
PRK09242	257	tropinone reductase; Provisional	96.52
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	96.52
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.51
PRK08263	275	short chain dehydrogenase; Provisional	96.5
PRK08277	278	D-mannonate oxidoreductase; Provisional	96.5
PRK07856	252	short chain dehydrogenase; Provisional	96.49
PRK06483	236	dihydromonapterin reductase; Provisional	96.49
PRK06179	270	short chain dehydrogenase; Provisional	96.48
PRK08278	273	short chain dehydrogenase; Provisional	96.48
PRK07985	294	oxidoreductase; Provisional	96.48
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.48
PRK05875	276	short chain dehydrogenase; Provisional	96.48
PRK12743	256	oxidoreductase; Provisional	96.47
PRK07097	265	gluconate 5-dehydrogenase; Provisional	96.47
PRK05650	270	short chain dehydrogenase; Provisional	96.47
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.45
PRK07791	286	short chain dehydrogenase; Provisional	96.44
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.44
PRK08251	248	short chain dehydrogenase; Provisional	96.43
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.43
PRK08703	239	short chain dehydrogenase; Provisional	96.43
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	96.41
PLN02253	280	xanthoxin dehydrogenase	96.39
PRK07074	257	short chain dehydrogenase; Provisional	96.39
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.37
COG4122	219	Predicted O-methyltransferase [General function pr	96.37
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	96.37
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.36
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.36
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.35
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.32
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	96.29
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.29
PRK06914	280	short chain dehydrogenase; Provisional	96.27
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	96.25
PRK06124	256	gluconate 5-dehydrogenase; Provisional	96.22
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	96.22
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.22
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.22
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.21
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	96.21
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.2
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	96.2
PRK06701	290	short chain dehydrogenase; Provisional	96.17
PRK07775	274	short chain dehydrogenase; Provisional	96.16
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	96.16
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.16
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.15
PRK07577	234	short chain dehydrogenase; Provisional	96.15
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	96.15
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.14
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.14
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.14
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.14
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	96.11
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.1
PRK06523	260	short chain dehydrogenase; Provisional	96.08
PRK08219	227	short chain dehydrogenase; Provisional	96.08
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	96.08
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.05
PRK12938	246	acetyacetyl-CoA reductase; Provisional	96.05
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.04
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	96.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	96.0
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.0
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	95.98
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.98
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.97
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	95.97
PRK12935	247	acetoacetyl-CoA reductase; Provisional	95.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	95.96
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	95.95
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	95.92
PRK08618	325	ornithine cyclodeaminase; Validated	95.92
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.92
PRK07102	243	short chain dehydrogenase; Provisional	95.92
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.91
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.9
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.88
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	95.87
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.87
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	95.86
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	95.82
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.82
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	95.8
PRK12746	254	short chain dehydrogenase; Provisional	95.79
PLN02214	342	cinnamoyl-CoA reductase	95.78
PLN02653	340	GDP-mannose 4,6-dehydratase	95.77
PRK08936	261	glucose-1-dehydrogenase; Provisional	95.77
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.76
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.74
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.73
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.72
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.7
PRK05855	582	short chain dehydrogenase; Validated	95.7
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	95.7
PLN02896	353	cinnamyl-alcohol dehydrogenase	95.69
PLN00016	378	RNA-binding protein; Provisional	95.69
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	95.68
PRK09135	249	pteridine reductase; Provisional	95.68
PRK07417	279	arogenate dehydrogenase; Reviewed	95.66
TIGR02415	254	23BDH acetoin reductases. One member of this famil	95.66
PRK11207	197	tellurite resistance protein TehB; Provisional	95.64
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.64
PRK12827	249	short chain dehydrogenase; Provisional	95.61
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	95.6
PLN02244	340	tocopherol O-methyltransferase	95.6
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.59
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	95.58
PLN03075	296	nicotianamine synthase; Provisional	95.58
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.58
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	95.58
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	95.58
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.58
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.57
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.57
PRK09134	258	short chain dehydrogenase; Provisional	95.56
PRK07023	243	short chain dehydrogenase; Provisional	95.55
PRK14967	223	putative methyltransferase; Provisional	95.55
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	95.55
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	95.54
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	95.54
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.53
PLN02476	278	O-methyltransferase	95.53
PRK08655	437	prephenate dehydrogenase; Provisional	95.53
PRK07041	230	short chain dehydrogenase; Provisional	95.53
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.53
PRK12744	257	short chain dehydrogenase; Provisional	95.52
PRK07574	385	formate dehydrogenase; Provisional	95.52
PRK12747	252	short chain dehydrogenase; Provisional	95.5
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	95.47
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.47
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.46
PLN02686	367	cinnamoyl-CoA reductase	95.46
PLN02589	247	caffeoyl-CoA O-methyltransferase	95.45
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	95.44
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.43
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	95.4
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.39
PRK05599	246	hypothetical protein; Provisional	95.37
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.37
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	95.35
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	95.35
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.33
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	95.32
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.32
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	95.29
PLN03139	386	formate dehydrogenase; Provisional	95.26
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.26
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	95.25
PLN02427	386	UDP-apiose/xylose synthase	95.24
PRK07069	251	short chain dehydrogenase; Validated	95.24
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	95.22
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	95.22
PRK07201	657	short chain dehydrogenase; Provisional	95.21
PRK08317	241	hypothetical protein; Provisional	95.2
PRK06940	275	short chain dehydrogenase; Provisional	95.19
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	95.18
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.18
PRK03659	601	glutathione-regulated potassium-efflux system prot	95.17
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	95.17
PRK13403	335	ketol-acid reductoisomerase; Provisional	95.14
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	95.12
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.11
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	95.1
PRK13243	333	glyoxylate reductase; Reviewed	95.08
PLN00198	338	anthocyanidin reductase; Provisional	95.08
PLN02240	352	UDP-glucose 4-epimerase	95.07
PRK06947	248	glucose-1-dehydrogenase; Provisional	95.05
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	95.04
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.03
PRK03562	621	glutathione-regulated potassium-efflux system prot	95.02
PRK07578	199	short chain dehydrogenase; Provisional	95.02
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.02
PLN00015	308	protochlorophyllide reductase	95.02
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	95.02
PRK08309	177	short chain dehydrogenase; Provisional	94.99
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	94.98
KOG1252	362	consensus Cystathionine beta-synthase and related	94.96
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	94.95
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	94.93
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	94.92
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	94.91
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	94.9
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.9
PLN00203	519	glutamyl-tRNA reductase	94.86
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	94.85
PLN02650	351	dihydroflavonol-4-reductase	94.85
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	94.84
PRK06123	248	short chain dehydrogenase; Provisional	94.83
PLN02583	297	cinnamoyl-CoA reductase	94.8
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.79
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	94.77
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	94.74
PLN02695	370	GDP-D-mannose-3',5'-epimerase	94.73
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.73
PRK10669	558	putative cation:proton antiport protein; Provision	94.72
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	94.72
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	94.72
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	94.71
PRK07340	304	ornithine cyclodeaminase; Validated	94.71
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	94.71
PRK06849	389	hypothetical protein; Provisional	94.71
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	94.69
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	94.69
PRK13255	218	thiopurine S-methyltransferase; Reviewed	94.67
PRK00811	283	spermidine synthase; Provisional	94.6
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	94.6
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	94.59
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.57
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.56
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	94.56
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	94.56

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=7.6e-58  Score=388.73  Aligned_cols=305  Identities=36%  Similarity=0.534  Sum_probs=278.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++.+++++  +++++.+.|+|+++||+|+|.|+|+|++|++.+.|.++... +|.+||||.+|+|+++|+++++|+
T Consensus         4 mkA~~~~~~~~p--l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~-~P~ipGHEivG~V~~vG~~V~~~k   80 (339)
T COG1064           4 MKAAVLKKFGQP--LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPK-LPLIPGHEIVGTVVEVGEGVTGLK   80 (339)
T ss_pred             eEEEEEccCCCC--ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCC-CCccCCcceEEEEEEecCCCccCC
Confidence            899999999988  99999999999999999999999999999999999998776 899999999999999999999999


Q ss_pred             CCCEEEE----------------------------EcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487           81 VGDQVCA----------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (325)
Q Consensus        81 ~Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~  132 (325)
                      +||||..                            +..+|+|+||+++++.+++++|+++++++||.+.+++.|.|++| 
T Consensus        81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~al-  159 (339)
T COG1064          81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL-  159 (339)
T ss_pred             CCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeeh-
Confidence            9999963                            12379999999999999999999999999999999999999999 


Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      ..++++||++|+|+|+ |++|++++|+|+.+|++|+++++++++++.++++|++++++.++.+....+.+.     +|++
T Consensus       160 k~~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~-----~d~i  233 (339)
T COG1064         160 KKANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEI-----ADAI  233 (339)
T ss_pred             hhcCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhh-----CcEE
Confidence            5589999999999999 799999999999999999999999999999999999999997766666666553     9999


Q ss_pred             EeCCChHHHHHhhccccCCCEEEEEeccC-CcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCc
Q 020487          213 LDCMGASYFQRNLGSLNIDGRLFIIGTQG-GAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       213 i~~~g~~~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                      ++|++...+..+++.|+++|+++++|.+. .....++...+..+++++.|+...++.          .+++++++..+|+
T Consensus       234 i~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~----------d~~e~l~f~~~g~  303 (339)
T COG1064         234 IDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRA----------DLEEALDFAAEGK  303 (339)
T ss_pred             EECCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHH----------HHHHHHHHHHhCC
Confidence            99999667899999999999999999885 444567788888999999999887653          2233899999999


Q ss_pred             cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          292 VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       292 l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++.+.+.++++++++|++.|++++..|++|+++
T Consensus       304 Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~  337 (339)
T COG1064         304 IKPEILETIPLDEINEAYERMEKGKVRGRAVIDM  337 (339)
T ss_pred             ceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecC
Confidence            9999888999999999999999999999999875

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=2.2e-55  Score=383.09  Aligned_cols=321  Identities=43%  Similarity=0.700  Sum_probs=291.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      ||++++...+.++++++++.|.|.|.++||+|||.++|||+.|.....|..+....+|++||.|++|+|+++|+++++|+
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~   80 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK   80 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence            89999999999988999999999999999999999999999999999998555556799999999999999999999999


Q ss_pred             CCCEEEEEc---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHH
Q 020487           81 VGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAI  157 (325)
Q Consensus        81 ~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~  157 (325)
                      +||+|+.+.   .+|+|+||+.++++.++++|+++++++||+++..++|||++|....++++|++|||+|++|++|.+++
T Consensus        81 ~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~ai  160 (326)
T COG0604          81 VGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAI  160 (326)
T ss_pred             CCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHH
Confidence            999999996   67999999999999999999999999999999999999999999899999999999999999999999


Q ss_pred             HHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEE
Q 020487          158 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       158 ~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~  237 (325)
                      |+|+++|+++++++.++++.+.++++|+++++++.+.++.+.+++.++++++|+|+|++|++.+...+.+|+++|+++.+
T Consensus       161 QlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~i  240 (326)
T COG0604         161 QLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSI  240 (326)
T ss_pred             HHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEE
Confidence            99999998888888788888899999999999999988999999999999999999999999999999999999999999


Q ss_pred             eccC-CcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhC-
Q 020487          238 GTQG-GAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESS-  315 (325)
Q Consensus       238 g~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~-  315 (325)
                      |... .....++...++.+.+...+......   +. +...+.++++++++.+|.+++.+..+|++++..++..+.... 
T Consensus       241 g~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~---~~-~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~  316 (326)
T COG0604         241 GALSGGPPVPLNLLPLLGKRLTLRGVTLGSR---DP-EALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLER  316 (326)
T ss_pred             ecCCCCCccccCHHHHhhccEEEEEecceec---ch-HHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHHHHHccc
Confidence            9987 34455667777778888888876655   12 566778888999999999999999999999977776655444 


Q ss_pred             CCceeEEEeC
Q 020487          316 QHIGKIMLVP  325 (325)
Q Consensus       316 ~~~gkvvi~~  325 (325)
                      +..||+|+.|
T Consensus       317 ~~~GKvvl~~  326 (326)
T COG0604         317 RTTGKVVLKV  326 (326)
T ss_pred             CCcceEEEeC
Confidence            8889999975

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.4e-51  Score=327.46  Aligned_cols=321  Identities=33%  Similarity=0.529  Sum_probs=295.0

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (325)
Q Consensus         2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (325)
                      |.+++++.|..+++++++.|.|+|+++|++||..|+|+|..|..+..|-+. +...|++||-|.+|+|+++|+.++++++
T Consensus        10 k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~-~~plPytpGmEaaGvVvAvG~gvtdrkv   88 (336)
T KOG1197|consen   10 KCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGMEAAGVVVAVGEGVTDRKV   88 (336)
T ss_pred             eEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcccceEEEEecCCcccccc
Confidence            678999999999999999999999999999999999999999999999885 3346999999999999999999999999


Q ss_pred             CCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHH
Q 020487           82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK  161 (325)
Q Consensus        82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~  161 (325)
                      ||+|.-+.+.|.|+++..+|...++++|+.+++.+||++...++|||..+++.-+++||++||++.|.|++|++++|+++
T Consensus        89 GDrVayl~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~r  168 (336)
T KOG1197|consen   89 GDRVAYLNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLR  168 (336)
T ss_pred             ccEEEEeccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHH
Confidence            99999998889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487          162 CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       162 ~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      ..|++++++..+.++++.+++.|+++.++++.+++.+.+.+.++++|+|+++|.+|.+.+...+.+|++.|.+|++|...
T Consensus       169 a~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~as  248 (336)
T KOG1197|consen  169 AVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNAS  248 (336)
T ss_pred             hcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHHHhccCceEEEecccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             CcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeE
Q 020487          242 GAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI  321 (325)
Q Consensus       242 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkv  321 (325)
                      +...+++..++..+++++.-.++..+.  +....+.....+++.++-+|.+++.|.++|||+++.+|..+++++++.||+
T Consensus       249 gl~~p~~l~~ls~k~l~lvrpsl~gYi--~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkv  326 (336)
T KOG1197|consen  249 GLIDPIPLNQLSPKALQLVRPSLLGYI--DGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKV  326 (336)
T ss_pred             CCCCCeehhhcChhhhhhccHhhhccc--CCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceE
Confidence            877777777777777776654443332  222344556667889999999999999999999999999999999999999


Q ss_pred             EEeC
Q 020487          322 MLVP  325 (325)
Q Consensus       322 vi~~  325 (325)
                      ++.|
T Consensus       327 lLlp  330 (336)
T KOG1197|consen  327 LLLP  330 (336)
T ss_pred             EEeC
Confidence            9875

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.9e-49  Score=323.07  Aligned_cols=306  Identities=26%  Similarity=0.389  Sum_probs=266.4

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (325)
Q Consensus         2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (325)
                      ++|.+..+++...+++.+++.|+|.++||+|++.|+|||++|++.+.|.++. ..+|.++|||.+|+|+++|+++++|++
T Consensus        11 ~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GHEiaG~VvkvGs~V~~~ki   89 (360)
T KOG0023|consen   11 FGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGHEIAGVVVKVGSNVTGFKI   89 (360)
T ss_pred             EEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCceeeEEEEEECCCcccccc
Confidence            5788888888666888999999999999999999999999999999999998 678999999999999999999999999


Q ss_pred             CCEEEE-------------------Ec-----------C-----CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHH
Q 020487           82 GDQVCA-------------------LL-----------G-----GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT  126 (325)
Q Consensus        82 Gd~V~~-------------------~~-----------~-----~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~  126 (325)
                      ||+|-.                   +|           .     .|+|++|+++++.+++++|++++++.||.+.++..|
T Consensus        90 GD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGIT  169 (360)
T KOG0023|consen   90 GDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGIT  169 (360)
T ss_pred             cCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcceE
Confidence            999831                   11           1     366999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh-hhHHHHHHcCCCEEEeCC-CchHHHHHHHHh
Q 020487          127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAVCKDLGADVCINYK-TEDFVARVKEET  204 (325)
Q Consensus       127 a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~-~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~  204 (325)
                      .|.+| .+.++.||+++.|.|+ |++|.+++|+|+++|.+|++++++. ++.+.++.+|++..++.. +.++...+.+.+
T Consensus       170 vYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~  247 (360)
T KOG0023|consen  170 VYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTT  247 (360)
T ss_pred             Eeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhh
Confidence            99999 6778889999999999 5599999999999999999999988 455666779999988887 677777777766


Q ss_pred             CCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHH
Q 020487          205 GGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVW  284 (325)
Q Consensus       205 ~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  284 (325)
                      .+ ++|-+.+. ....+..+++.|+++|++|++|.+.. ...++..++..+.+++.|+.++.+..      .+|    ++
T Consensus       248 dg-~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~-~~~~~~~~lil~~~~I~GS~vG~~ke------t~E----~L  314 (360)
T KOG0023|consen  248 DG-GIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK-PLKLDTFPLILGRKSIKGSIVGSRKE------TQE----AL  314 (360)
T ss_pred             cC-cceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC-cccccchhhhcccEEEEeeccccHHH------HHH----HH
Confidence            43 45555544 34557888999999999999998876 67788888899999999999887642      223    88


Q ss_pred             HHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          285 PAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       285 ~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      +++.++.+++.+ +..+++++++|+++|++++..+|.|++
T Consensus       315 df~a~~~ik~~I-E~v~~~~v~~a~erm~kgdV~yRfVvD  353 (360)
T KOG0023|consen  315 DFVARGLIKSPI-ELVKLSEVNEAYERMEKGDVRYRFVVD  353 (360)
T ss_pred             HHHHcCCCcCce-EEEehhHHHHHHHHHHhcCeeEEEEEE
Confidence            999999998887 888999999999999999999999886

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2e-48  Score=321.13  Aligned_cols=308  Identities=23%  Similarity=0.331  Sum_probs=262.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhhhhhCCCCCCC--CCCCCCCCceeEEEEEecCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPK--GASPYPGLECSGTILSVGKNVS   77 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~-~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~vG~~~~   77 (325)
                      |+|+++..+++   +++++.|.|++ .|+||+|++.+.|||++|.|.+........  .-|+++|||.+|+|.++|++|+
T Consensus         5 ~~A~vl~g~~d---i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk   81 (354)
T KOG0024|consen    5 NLALVLRGKGD---IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK   81 (354)
T ss_pred             cceeEEEccCc---eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence            68999998877   99999999997 899999999999999999999987654332  3589999999999999999999


Q ss_pred             CCCCCCEEEEEc----------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHH
Q 020487           78 RWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWS  129 (325)
Q Consensus        78 ~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~  129 (325)
                      ++++||||..-.                            .+|++++|++.+++.+++||++++++++| |..+.+++|+
T Consensus        82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGA-l~ePLsV~~H  160 (354)
T KOG0024|consen   82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGA-LIEPLSVGVH  160 (354)
T ss_pred             ccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcc-cccchhhhhh
Confidence            999999997311                            25999999999999999999999999998 5556899999


Q ss_pred             HHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCc----hHHHHHHHHh
Q 020487          130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTE----DFVARVKEET  204 (325)
Q Consensus       130 ~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~  204 (325)
                      |+ +++++++|+++||+|+ |++|+.+...|+.+|+ +|++++..+.|++.++++|++.+.+....    .+.+.+....
T Consensus       161 Ac-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~  238 (354)
T KOG0024|consen  161 AC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKAL  238 (354)
T ss_pred             hh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhc
Confidence            99 8889999999999999 9999999999999999 89999999999999999999988766553    3445556667


Q ss_pred             CCCcccEEEeCCChHH-HHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHH
Q 020487          205 GGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV  283 (325)
Q Consensus       205 ~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  283 (325)
                      +...+|+.|||+|... ++.++..++.+|++++.| .+.+...++......+++.+.|++.+....          ++.+
T Consensus       239 g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg-~g~~~~~fpi~~v~~kE~~~~g~fry~~~~----------y~~a  307 (354)
T KOG0024|consen  239 GKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVG-MGAEEIQFPIIDVALKEVDLRGSFRYCNGD----------YPTA  307 (354)
T ss_pred             cccCCCeEEEccCchHHHHHHHHHhccCCEEEEec-cCCCccccChhhhhhheeeeeeeeeecccc----------HHHH
Confidence            7677999999999765 688899999999977776 344566788888888999999987654432          2238


Q ss_pred             HHHHHCCcc--ccccccccchhhHHHHHHHHHhCCC-ceeEEEeC
Q 020487          284 WPAIAVGKV--KPVIYKYLPLCEAAEAHQLMESSQH-IGKIMLVP  325 (325)
Q Consensus       284 ~~~~~~g~l--~~~~~~~~~l~~~~~a~~~~~~~~~-~gkvvi~~  325 (325)
                      ++++++|++  ++++++.|+++++.+||+.+.+++. .-|+++.+
T Consensus       308 i~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~  352 (354)
T KOG0024|consen  308 IELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITG  352 (354)
T ss_pred             HHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeC
Confidence            999999996  4688999999999999999987774 23777653

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=3.6e-48  Score=322.50  Aligned_cols=308  Identities=26%  Similarity=0.384  Sum_probs=273.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      +||++..++++|  |+++++.+++|+++||+||+.++|+|++|....+|..|..  +|.++|||++|+|++||+.|+.++
T Consensus         3 ~~aAV~~~~~~P--l~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~--~P~vLGHEgAGiVe~VG~gVt~vk   78 (366)
T COG1062           3 TRAAVAREAGKP--LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG--FPAVLGHEGAGIVEAVGEGVTSVK   78 (366)
T ss_pred             ceEeeeecCCCC--eEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC--CceecccccccEEEEecCCccccC
Confidence            479999999988  9999999999999999999999999999999999999876  799999999999999999999999


Q ss_pred             CCCEEEEEc------------------------------------------------CCceeeeEEeecCCceeeCCCCC
Q 020487           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (325)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (325)
                      +||+|+...                                                ..++|++|.++++.++++++++.
T Consensus        79 pGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~  158 (366)
T COG1062          79 PGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA  158 (366)
T ss_pred             CCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence            999997422                                                01489999999999999999999


Q ss_pred             CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      +++.++.+.+..+|.+.+..+.+++++|+++.|.|. |.+|++++|-|+..|+ ++++++.+++++++++++|+.+++|.
T Consensus       159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~  237 (366)
T COG1062         159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNP  237 (366)
T ss_pred             CccceEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecc
Confidence            999999999999999999989999999999999999 9999999999999999 89999999999999999999999998


Q ss_pred             CCc-hHHHHHHHHhCCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCC-cccccchHHHHhhccEeeeccccccc
Q 020487          192 KTE-DFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRSRS  268 (325)
Q Consensus       192 ~~~-~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~  268 (325)
                      ++. +..+.+.+.+++ ++|.+|||+|.. .+..+++++.++|+.+.+|.... ...+.+..++... .++.|+......
T Consensus       238 ~~~~~vv~~i~~~T~g-G~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~~~  315 (366)
T COG1062         238 KEVDDVVEAIVELTDG-GADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGGAR  315 (366)
T ss_pred             hhhhhHHHHHHHhcCC-CCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEEeecCCc
Confidence            876 588888898886 899999999975 46888999999999999998775 3455666666644 889998877553


Q ss_pred             chhHHHHHHHHHHHHHHHHHCCcc--ccccccccchhhHHHHHHHHHhCCCceeEE
Q 020487          269 TENKALIVSEVEKNVWPAIAVGKV--KPVIYKYLPLCEAAEAHQLMESSQHIGKIM  322 (325)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~g~l--~~~~~~~~~l~~~~~a~~~~~~~~~~gkvv  322 (325)
                      .+       ..+..++++..+|+|  +.++++.++|+|+++||+.|.+++....+|
T Consensus       316 p~-------~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi  364 (366)
T COG1062         316 PR-------SDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVI  364 (366)
T ss_pred             cc-------cchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEe
Confidence            21       123338899999985  568899999999999999999999875444

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=3.4e-47  Score=341.17  Aligned_cols=312  Identities=26%  Similarity=0.354  Sum_probs=270.5

Q ss_pred             CEEEEEcCCCC------CcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecC
Q 020487            1 MKAIVITQPGS------PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK   74 (325)
Q Consensus         1 m~a~~~~~~~~------~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~   74 (325)
                      |||+++.++|.      ++.+++++.+.|+|+++||+||+.+++||++|++.+.|..+.  .+|.++|||++|+|+++|+
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~GhE~~G~V~~vG~   78 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR--PLPMALGHEAAGVVVEVGE   78 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC--CCCccCCccceeEEEEeCC
Confidence            99999998875      367999999999999999999999999999999999887643  3588999999999999999


Q ss_pred             CCCCCCCCCEEEEEcC------------------------------------------------CceeeeEEeecCCcee
Q 020487           75 NVSRWKVGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVL  106 (325)
Q Consensus        75 ~~~~~~~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~  106 (325)
                      +++++++||+|+....                                                .|+|++|+.++++.++
T Consensus        79 ~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~  158 (371)
T cd08281          79 GVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV  158 (371)
T ss_pred             CCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence            9999999999986310                                                2689999999999999


Q ss_pred             eCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCC
Q 020487          107 PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGA  185 (325)
Q Consensus       107 ~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~  185 (325)
                      ++|+++++++++.+.++..+||.++.+...+++|++|+|+|+ |++|++++|+|+..|+ +|++++.++++++.++++|+
T Consensus       159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga  237 (371)
T cd08281         159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGA  237 (371)
T ss_pred             ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCC
Confidence            999999999999999999999999878888999999999996 9999999999999999 69999999999999999999


Q ss_pred             CEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCC-cccccchHHHHhhccEeeecc
Q 020487          186 DVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQAAG  263 (325)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~  263 (325)
                      +++++....++.+.+++.+++ ++|++|||+|. ..+..++++++++|+++.+|.... ....++...++.+++++.++.
T Consensus       238 ~~~i~~~~~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~  316 (371)
T cd08281         238 TATVNAGDPNAVEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSY  316 (371)
T ss_pred             ceEeCCCchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEe
Confidence            999988877778888888776 89999999986 467888999999999999987643 234566777888999999987


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487          264 LRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIML  323 (325)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  323 (325)
                      ......       ++.++.+++++.+|+++.  +++++|+++|+++|++.+++++..+|+|+
T Consensus       317 ~~~~~~-------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         317 MGSCVP-------RRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             cCCCCh-------HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            654321       123445789999999864  67899999999999999999998877663

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=1.8e-46  Score=331.02  Aligned_cols=317  Identities=27%  Similarity=0.396  Sum_probs=270.1

Q ss_pred             CEEEEEcCCCCC---cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCC
Q 020487            1 MKAIVITQPGSP---EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS   77 (325)
Q Consensus         1 m~a~~~~~~~~~---~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~   77 (325)
                      |||+++..++.+   +.+++++.|.|.|+++||+||+.++++|++|++.+.|.++....+|.++|||++|+|+++|+++.
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL   80 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence            899999988866   56889999999999999999999999999999999887754445688999999999999999998


Q ss_pred             C-CCCCCEEEEEcC-CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEE-cCCchHHH
Q 020487           78 R-WKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH-GGSSGIGT  154 (325)
Q Consensus        78 ~-~~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~-g~~g~~G~  154 (325)
                      . |++||+|+++.. +|+|++|++++++.++++|++++++++++++....+||.++ ....+ ++++++|+ +++|.+|+
T Consensus        81 ~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~  158 (324)
T cd08291          81 AQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGR  158 (324)
T ss_pred             ccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHH
Confidence            6 999999998764 39999999999999999999999999998888889998554 55555 45556665 77899999


Q ss_pred             HHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEE
Q 020487          155 FAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL  234 (325)
Q Consensus       155 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~  234 (325)
                      +++|+|+.+|++|+++++++++++.++++|++++++....++.+.+++.++++++|++|||+|.......+++++++|++
T Consensus       159 ~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~  238 (324)
T cd08291         159 MLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTL  238 (324)
T ss_pred             HHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHhhCCCCEE
Confidence            99999999999999999999999999999999999988888888888888878899999999998888889999999999


Q ss_pred             EEEeccCCccc-ccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHH
Q 020487          235 FIIGTQGGAKT-ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLME  313 (325)
Q Consensus       235 v~~g~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~  313 (325)
                      +.+|....... .++...++.+++++.++....+.....    .+.++.+.+++. +.+++.++++|+++|+++|++.+.
T Consensus       239 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~  313 (324)
T cd08291         239 YVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLG----PEVVKKLKKLVK-TELKTTFASRYPLALTLEAIAFYS  313 (324)
T ss_pred             EEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccC----HHHHHHHHHHHh-CccccceeeEEcHHHHHHHHHHHH
Confidence            99987654332 255566777899998887654432111    234555777777 889999999999999999999999


Q ss_pred             hCCCceeEEEe
Q 020487          314 SSQHIGKIMLV  324 (325)
Q Consensus       314 ~~~~~gkvvi~  324 (325)
                      +++..||++++
T Consensus       314 ~~~~~Gkvv~~  324 (324)
T cd08291         314 KNMSTGKKLLI  324 (324)
T ss_pred             hCCCCCeEEeC
Confidence            99999999874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=5.6e-46  Score=329.95  Aligned_cols=306  Identities=27%  Similarity=0.394  Sum_probs=260.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++   .+++++.+.|+|+++||+||+.++++|++|++.+.+.++....+|.++|||++|+|+++|++++.++
T Consensus         1 mka~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   77 (339)
T cd08239           1 MRGAVFPGDR---TVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFR   77 (339)
T ss_pred             CeEEEEecCC---ceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCC
Confidence            9999998654   3999999999999999999999999999999988776433223478999999999999999999999


Q ss_pred             CCCEEEEEc----------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487           81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (325)
Q Consensus        81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~  132 (325)
                      +||+|+...                            .+|+|++|+.++.+.++++|+++++++++++++++.+||+++ 
T Consensus        78 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l-  156 (339)
T cd08239          78 VGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-  156 (339)
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-
Confidence            999998642                            258999999999999999999999999999999999999998 


Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccE
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      ....+++|++|+|+|+ |.+|++++|+|+.+|++ |+++++++++++.++++|++.+++++... .+.+.+.++++++|+
T Consensus       157 ~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~-~~~~~~~~~~~~~d~  234 (339)
T cd08239         157 RRVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD-VQEIRELTSGAGADV  234 (339)
T ss_pred             HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch-HHHHHHHhCCCCCCE
Confidence            5678899999999987 99999999999999998 99999999999999999999999887666 667777777778999


Q ss_pred             EEeCCChHHH-HHhhccccCCCEEEEEeccCCcccccc-hHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHC
Q 020487          212 ILDCMGASYF-QRNLGSLNIDGRLFIIGTQGGAKTELN-ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV  289 (325)
Q Consensus       212 vi~~~g~~~~-~~~~~~l~~~g~~v~~g~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (325)
                      +|||+|+... ..++++++++|+++.+|.....  .++ ...++.+++++.++.....          +.++.+++++.+
T Consensus       235 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~~~~~  302 (339)
T cd08239         235 AIECSGNTAARRLALEAVRPWGRLVLVGEGGEL--TIEVSNDLIRKQRTLIGSWYFSV----------PDMEECAEFLAR  302 (339)
T ss_pred             EEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc--ccCcHHHHHhCCCEEEEEecCCH----------HHHHHHHHHHHc
Confidence            9999998754 7789999999999999875432  233 2456678999988755322          133448899999


Q ss_pred             Cccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          290 GKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       290 g~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      |.++  ++++++|+++++++|++.+++++ .||+|+..
T Consensus       303 g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         303 HKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             CCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence            9876  46789999999999999998865 68999863

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=1.1e-45  Score=329.95  Aligned_cols=311  Identities=21%  Similarity=0.319  Sum_probs=267.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++.+++++  +++++.+.|+|+++||+||+.++|+|++|++.+.|..+.  .+|.++|||++|+|+++|++++.|+
T Consensus         2 mka~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~   77 (358)
T TIGR03451         2 VRGVIARSKGAP--VELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND--EFPFLLGHEAAGVVEAVGEGVTDVA   77 (358)
T ss_pred             cEEEEEccCCCC--CEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc--cCCcccccceEEEEEEeCCCCcccC
Confidence            999999998876  888999999999999999999999999999999886543  3588999999999999999999999


Q ss_pred             CCCEEEEEc----------------------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccC
Q 020487           81 VGDQVCALL----------------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF  120 (325)
Q Consensus        81 ~Gd~V~~~~----------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l  120 (325)
                      +||+|+...                                        .+|+|+||+.++++.++++|+++++++++.+
T Consensus        78 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l  157 (358)
T TIGR03451        78 PGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLL  157 (358)
T ss_pred             CCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhh
Confidence            999997521                                        2488999999999999999999999999999


Q ss_pred             cchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHH
Q 020487          121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR  199 (325)
Q Consensus       121 ~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  199 (325)
                      ++.+.++|.++.+...+++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++++++....++.+.
T Consensus       158 ~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~  236 (358)
T TIGR03451       158 GCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEA  236 (358)
T ss_pred             cccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHH
Confidence            9999999988877888999999999986 9999999999999999 5999999999999999999999998887777888


Q ss_pred             HHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCc-ccccchHHHHhhccEeeecccccccchhHHHHHH
Q 020487          200 VKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLRSRSTENKALIVS  277 (325)
Q Consensus       200 ~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  277 (325)
                      +.+.+++.++|++|||+|. ..+..++++++++|+++.+|..... ...++...++.+++++.+++......       +
T Consensus       237 i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~  309 (358)
T TIGR03451       237 IRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLP-------E  309 (358)
T ss_pred             HHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCc-------H
Confidence            8888887789999999996 4578889999999999999976532 23456666777889988875432211       1


Q ss_pred             HHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          278 EVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       278 ~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      +.++++++++.+|++++  +++++|+++|+++|++.+++++.. |+++.
T Consensus       310 ~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       310 RDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             HHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            23555889999999864  678999999999999999888775 66653

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=6.9e-46  Score=300.17  Aligned_cols=314  Identities=24%  Similarity=0.341  Sum_probs=279.3

Q ss_pred             EEEEEcCCCCC-cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            2 KAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         2 ~a~~~~~~~~~-~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |++++...|+| ++++++..+.|..+.++|+||+++++|||+|+..++|.+|..+.+|.+-|.|++|+|+.+|+++++|+
T Consensus        21 kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgfk  100 (354)
T KOG0025|consen   21 KALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGFK  100 (354)
T ss_pred             ceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCccC
Confidence            78999999987 78999999999988888999999999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEEEcCC-ceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHH
Q 020487           81 VGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM  159 (325)
Q Consensus        81 ~Gd~V~~~~~~-g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~  159 (325)
                      +||+|.....+ |.|++|.+.+++.++++++.++++.||++....||||..|.+...+++||+|+..||++.+|.+++|+
T Consensus       101 ~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQl  180 (354)
T KOG0025|consen  101 PGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQL  180 (354)
T ss_pred             CCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHH
Confidence            99999987654 89999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHCCCEEEEEecChhhHHHH----HHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEE
Q 020487          160 GKCQGVRVFVTAGSEEKLAVC----KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF  235 (325)
Q Consensus       160 a~~~g~~v~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v  235 (325)
                      |++.|++-+.++|+....+++    +++||++++...+-.-.+..+.........+.++|+|+.....+.+.|..||..+
T Consensus       181 aka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~iar~L~~Ggtmv  260 (354)
T KOG0025|consen  181 AKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEIARYLERGGTMV  260 (354)
T ss_pred             HHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHHHHHHhcCceEE
Confidence            999999999999888877655    4699999986443222222222234457899999999999889999999999999


Q ss_pred             EEeccCCcccccchHHHHhhccEeeecccccccchhH-HHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHh
Q 020487          236 IIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK-ALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMES  314 (325)
Q Consensus       236 ~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~  314 (325)
                      .+|++..++...+...++.+++.+.|+++..+...+. ++.+.+++..+.++...|++.....+..+|++...|++...+
T Consensus       261 TYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~  340 (354)
T KOG0025|consen  261 TYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALS  340 (354)
T ss_pred             EecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHH
Confidence            9999998888889999999999999999988765553 556778888899999999999988899999999999996644


Q ss_pred             C
Q 020487          315 S  315 (325)
Q Consensus       315 ~  315 (325)
                      .
T Consensus       341 ~  341 (354)
T KOG0025|consen  341 K  341 (354)
T ss_pred             H
Confidence            4

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=6.9e-45  Score=321.07  Aligned_cols=323  Identities=23%  Similarity=0.334  Sum_probs=279.6

Q ss_pred             CEEEEEcCCCCC-cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~-~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      |||+++..++.+ +.+++++.+.|.+.++||+|++.++++|++|++.+.|.++....+|.++|||++|+|+++|++++.+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   80 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL   80 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence            899999887765 4588999999999999999999999999999999988765433457889999999999999999999


Q ss_pred             CCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHH
Q 020487           80 KVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM  159 (325)
Q Consensus        80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~  159 (325)
                      ++||+|+++...|+|++|+.++...++++|+++++++++.++....++|+++ ...++++|++++|+|++|.+|++++++
T Consensus        81 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~  159 (324)
T cd08292          81 QVGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAML  159 (324)
T ss_pred             CCCCEEEeccCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHH
Confidence            9999999987679999999999999999999999999999998899999987 557899999999999999999999999


Q ss_pred             HHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEec
Q 020487          160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       160 a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      |+.+|++++++++++++.+.++++|++.+++.....+.+.+.+.++++++|++|||+|+..+...+++++++|+++.+|.
T Consensus       160 a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~  239 (324)
T cd08292         160 AAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGS  239 (324)
T ss_pred             HHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEec
Confidence            99999999999999999998888999899888888888888888988899999999999888888999999999999987


Q ss_pred             cCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCce
Q 020487          240 QGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIG  319 (325)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~g  319 (325)
                      .......++....+.+++++.++..........+....+.++.+++++.+|.+.+.+.+.|+++++++|++.+.+++..+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~  319 (324)
T cd08292         240 MSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAG  319 (324)
T ss_pred             CCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCc
Confidence            54333345555566789999888665432211123345567779999999999866778999999999999999888888


Q ss_pred             eEEEe
Q 020487          320 KIMLV  324 (325)
Q Consensus       320 kvvi~  324 (325)
                      |++++
T Consensus       320 kvvv~  324 (324)
T cd08292         320 KVLLR  324 (324)
T ss_pred             eEEeC
Confidence            99874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=9.6e-45  Score=326.16  Aligned_cols=311  Identities=23%  Similarity=0.310  Sum_probs=260.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++++  +++++.+.|+|.++||+||+.++|||++|++.+.|..+....+|.++|||++|+|+++|+++++|+
T Consensus        11 mka~~~~~~~~~--~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~   88 (381)
T PLN02740         11 CKAAVAWGPGEP--LVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDLK   88 (381)
T ss_pred             eEEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCcCC
Confidence            899999887754  788899999999999999999999999999999887654445688999999999999999999999


Q ss_pred             CCCEEEEEc---------------------------------------------------CCceeeeEEeecCCceeeCC
Q 020487           81 VGDQVCALL---------------------------------------------------GGGGYAEKVAVPAGQVLPVP  109 (325)
Q Consensus        81 ~Gd~V~~~~---------------------------------------------------~~g~~~~~~~~~~~~~~~~p  109 (325)
                      +||+|+...                                                   .+|+|+||++++.+.++++|
T Consensus        89 vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP  168 (381)
T PLN02740         89 AGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKID  168 (381)
T ss_pred             CCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECC
Confidence            999998632                                                   14899999999999999999


Q ss_pred             CCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEE
Q 020487          110 SGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVC  188 (325)
Q Consensus       110 ~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~  188 (325)
                      +++++++++.+.+++.++|.++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++.+
T Consensus       169 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~  247 (381)
T PLN02740        169 PNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDF  247 (381)
T ss_pred             CCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEE
Confidence            999999999999999999998877889999999999997 9999999999999999 69999999999999999999998


Q ss_pred             EeCCCc--hHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCC-CEEEEEeccCCc-ccccchHHHHhhccEeeecc
Q 020487          189 INYKTE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGGA-KTELNITSLFAKRLTVQAAG  263 (325)
Q Consensus       189 ~~~~~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~  263 (325)
                      ++....  ++.+.+.+.+++ ++|++|||+|. ..+..++.+++++ |+++.+|..... ...++...+ .+++++.|+.
T Consensus       248 i~~~~~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~-~~~~~i~g~~  325 (381)
T PLN02740        248 INPKDSDKPVHERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMEL-FDGRSITGSV  325 (381)
T ss_pred             EecccccchHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHH-hcCCeEEEEe
Confidence            887653  366777777776 89999999997 4578888999896 999999976532 122333333 3678888876


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          264 LRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      ...+...       ..++.+++++.+|.++.  +++++|+|+|+++|++.+.+++. .|++|.
T Consensus       326 ~~~~~~~-------~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~  380 (381)
T PLN02740        326 FGDFKGK-------SQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLH  380 (381)
T ss_pred             cCCCCcH-------HHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEe
Confidence            5543211       12344888899998754  67899999999999999988776 488875

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3e-45  Score=300.15  Aligned_cols=310  Identities=25%  Similarity=0.323  Sum_probs=268.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      +||++.+++++|  |.++++..++|+.+||+||+.++++|++|...++|..+ ...+|.++|||.+|+|+++|+.++.++
T Consensus         8 CKAAV~w~a~~P--L~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~-~~~fP~IlGHEaaGIVESvGegV~~vk   84 (375)
T KOG0022|consen    8 CKAAVAWEAGKP--LVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDP-EGLFPVILGHEAAGIVESVGEGVTTVK   84 (375)
T ss_pred             EeEeeeccCCCC--eeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCc-cccCceEecccceeEEEEecCCccccC
Confidence            589999999998  99999999999999999999999999999999999884 345799999999999999999999999


Q ss_pred             CCCEEEEEcC-------------------------------------------------CceeeeEEeecCCceeeCCCC
Q 020487           81 VGDQVCALLG-------------------------------------------------GGGYAEKVAVPAGQVLPVPSG  111 (325)
Q Consensus        81 ~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~  111 (325)
                      +||+|+.+..                                                 ..+|+||.+++...++++++.
T Consensus        85 ~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~  164 (375)
T KOG0022|consen   85 PGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPS  164 (375)
T ss_pred             CCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCC
Confidence            9999985320                                                 147999999999999999999


Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEe
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN  190 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (325)
                      .+++.++.|.+..+|+|.|..+.++++||+++.|+|- |.+|+++++-|+..|+ +++.++-++++.+.++++|+.+++|
T Consensus       165 aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iN  243 (375)
T KOG0022|consen  165 APLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFIN  243 (375)
T ss_pred             CChhheeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecC
Confidence            9999999999999999999999999999999999998 9999999999999999 9999999999999999999999998


Q ss_pred             CCC--chHHHHHHHHhCCCcccEEEeCCChHH-HHHhhccccCC-CEEEEEeccCC-cccccchHHHHhhccEeeecccc
Q 020487          191 YKT--EDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLR  265 (325)
Q Consensus       191 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~  265 (325)
                      ..+  ....+.+++.+++ ++|.-|+|+|... +.+++.+.++| |.-+.+|.... ...+..+.+++ .+.++.|+..+
T Consensus       244 p~d~~~~i~evi~EmTdg-GvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~-~GR~~~Gs~FG  321 (375)
T KOG0022|consen  244 PKDLKKPIQEVIIEMTDG-GVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLV-TGRTWKGSAFG  321 (375)
T ss_pred             hhhccccHHHHHHHHhcC-CceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhc-cccEEEEEecc
Confidence            773  3467888888884 8999999999865 58888888888 99999998775 34555666655 57888888777


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHCCc--cccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          266 SRSTENKALIVSEVEKNVWPAIAVGK--VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~g~--l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      .+..+.       .+..+.+...+++  ++.++++.++++++++||+.|.+++.. |.|+.
T Consensus       322 G~K~~~-------~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~  374 (375)
T KOG0022|consen  322 GFKSKS-------DIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW  374 (375)
T ss_pred             cccchh-------hhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence            654322       2222555555565  567899999999999999999999988 66654

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=2.7e-44  Score=322.44  Aligned_cols=308  Identities=22%  Similarity=0.257  Sum_probs=258.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..+++  .+++++.+.|+|+++||+|||.++|||++|++.+.+..    .+|.++|||++|+|+++|++++.|+
T Consensus        13 mka~~~~~~~~--~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~----~~p~i~GhE~~G~V~~vG~~v~~~~   86 (378)
T PLN02827         13 CRAAVAWGAGE--ALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA----LFPRIFGHEASGIVESIGEGVTEFE   86 (378)
T ss_pred             eEEEEEecCCC--CceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC----CCCeeecccceEEEEEcCCCCcccC
Confidence            89999987653  38899999999999999999999999999999887642    2477999999999999999999999


Q ss_pred             CCCEEEEEcC------------------------------------------------CceeeeEEeecCCceeeCCCCC
Q 020487           81 VGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVLPVPSGV  112 (325)
Q Consensus        81 ~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~  112 (325)
                      +||+|+....                                                +|+|++|+.+++..++++|+++
T Consensus        87 ~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l  166 (378)
T PLN02827         87 KGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA  166 (378)
T ss_pred             CCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence            9999987521                                                2789999999999999999999


Q ss_pred             CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      ++++++.+.+++.++|.++....++++|++|+|+|+ |.+|++++|+|+.+|+ .|++++.++++.+.++++|++++++.
T Consensus       167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~  245 (378)
T PLN02827        167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINP  245 (378)
T ss_pred             CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcc
Confidence            999999888888999988767788999999999997 9999999999999999 57778889999999999999998887


Q ss_pred             CC--chHHHHHHHHhCCCcccEEEeCCChH-HHHHhhccccCC-CEEEEEeccCCcccccch-HHHHhhccEeeeccccc
Q 020487          192 KT--EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNID-GRLFIIGTQGGAKTELNI-TSLFAKRLTVQAAGLRS  266 (325)
Q Consensus       192 ~~--~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~-~~~~~~~~~i~~~~~~~  266 (325)
                      ..  ..+.+.+.+.+++ ++|++|||+|.. .+...++.++++ |+++.+|..... ..+.. ..++.+++++.|+....
T Consensus       246 ~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~  323 (378)
T PLN02827        246 NDLSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK-PEVSAHYGLFLSGRTLKGSLFGG  323 (378)
T ss_pred             cccchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC-ccccccHHHHhcCceEEeeecCC
Confidence            65  3566677777765 899999999975 578889999998 999999876542 22322 34667899999876643


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          267 RSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +..       ...++++++++.+|++++  +++++|+|+++++|++.+++++. +|+||.+
T Consensus       324 ~~~-------~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~  376 (378)
T PLN02827        324 WKP-------KSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHM  376 (378)
T ss_pred             Cch-------hhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEe
Confidence            321       112344888999999887  78999999999999999998877 5888764

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=5.8e-44  Score=319.68  Aligned_cols=311  Identities=23%  Similarity=0.337  Sum_probs=256.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..+++.  +++++.|.|+|.++||+||+.++|+|++|++.+.|.++.. .+|.++|||++|+|+++|+++++|+
T Consensus         2 ~~a~~~~~~~~~--l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~-~~p~i~GhE~~G~V~~vG~~v~~~~   78 (368)
T TIGR02818         2 SRAAVAWAAGQP--LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEG-VFPVILGHEGAGIVEAVGEGVTSVK   78 (368)
T ss_pred             ceEEEEecCCCC--eEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCC-CCCeeeccccEEEEEEECCCCccCC
Confidence            899998887654  8899999999999999999999999999999998876532 3588999999999999999999999


Q ss_pred             CCCEEEEEcC------------------------------------------------CceeeeEEeecCCceeeCCCCC
Q 020487           81 VGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVLPVPSGV  112 (325)
Q Consensus        81 ~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~  112 (325)
                      +||+|+....                                                .|+|+||++++++.++++|+++
T Consensus        79 ~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l  158 (368)
T TIGR02818        79 VGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA  158 (368)
T ss_pred             CCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence            9999986420                                                2689999999999999999999


Q ss_pred             CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      ++++++.+++++.++|+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++++++.
T Consensus       159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~  237 (368)
T TIGR02818       159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNP  237 (368)
T ss_pred             CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcc
Confidence            999999999999999999877889999999999987 9999999999999999 79999999999999999999998886


Q ss_pred             CC--chHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCC-CEEEEEeccCC-cccccchHHHHhhccEeeeccccc
Q 020487          192 KT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRS  266 (325)
Q Consensus       192 ~~--~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~  266 (325)
                      .+  ..+.+.+.+.+++ ++|++|||+|. ..+..++++++++ |+++.+|.... .....+...++ ++..+.++....
T Consensus       238 ~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~  315 (368)
T TIGR02818       238 NDYDKPIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWRGSAFGG  315 (368)
T ss_pred             cccchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEEEeeccC
Confidence            64  3455667777775 89999999996 4568889999886 99999997642 22233333333 234455654332


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          267 RSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ...       .+.++++++++.+|+++  ++++++|+|+|+++|++.+++++. .|+++.+
T Consensus       316 ~~~-------~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       316 VKG-------RTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             CCc-------HHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence            211       12344588999999875  567999999999999999987765 5988864

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=1.6e-44  Score=321.98  Aligned_cols=306  Identities=24%  Similarity=0.321  Sum_probs=251.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      ||+..+...+..+.+++.+.+.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++++.|+
T Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v~~~~   89 (360)
T PLN02586         11 QKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGF-TRYPIVPGHEIVGIVTKLGKNVKKFK   89 (360)
T ss_pred             hheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCC-CCCCccCCcceeEEEEEECCCCCccC
Confidence            55555554444455888899999999999999999999999999998876542 24588999999999999999999999


Q ss_pred             CCCEEEEE-----c------------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHH
Q 020487           81 VGDQVCAL-----L------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC  125 (325)
Q Consensus        81 ~Gd~V~~~-----~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~  125 (325)
                      +||+|+..     |                              .+|+|+||++++++.++++|+++++++++++.+.+.
T Consensus        90 vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~  169 (360)
T PLN02586         90 EGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGI  169 (360)
T ss_pred             CCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchH
Confidence            99999731     1                              158999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH-HHHHHcCCCEEEeCCCchHHHHHHHHh
Q 020487          126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVCINYKTEDFVARVKEET  204 (325)
Q Consensus       126 ~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~  204 (325)
                      ++|+++.....+++|++|+|.|+ |++|++++|+|+.+|++|++++.+++++ ..++++|++++++....   +.+.+.+
T Consensus       170 ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~---~~~~~~~  245 (360)
T PLN02586        170 TVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDP---EKMKAAI  245 (360)
T ss_pred             HHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCH---HHHHhhc
Confidence            99999866666789999999887 9999999999999999998888776654 45578999988876543   2444544


Q ss_pred             CCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHH
Q 020487          205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV  283 (325)
Q Consensus       205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  283 (325)
                      +  ++|++|||+|.. .+..++++++++|+++.+|.... ...++...++.++..+.++.....          +.++++
T Consensus       246 ~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~  312 (360)
T PLN02586        246 G--TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK-PLELPIFPLVLGRKLVGGSDIGGI----------KETQEM  312 (360)
T ss_pred             C--CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC-CCccCHHHHHhCCeEEEEcCcCCH----------HHHHHH
Confidence            4  699999999974 57888999999999999986543 345666677777877777754321          124458


Q ss_pred             HHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          284 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       284 ~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ++++.+|++++.+ ++|+|+|+++|++.+.+++..||+|+.|
T Consensus       313 ~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        313 LDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             HHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence            8999999998766 5899999999999999998889999875

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=1.5e-43  Score=317.66  Aligned_cols=309  Identities=21%  Similarity=0.277  Sum_probs=259.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++++  +++++.+.|+|+++||+||+.+++||++|++.+.|..+. ..+|.++|||++|+|+++|++++.|+
T Consensus         3 ~ka~~~~~~~~~--~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~   79 (369)
T cd08301           3 CKAAVAWEAGKP--LVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQT-PLFPRILGHEAAGIVESVGEGVTDLK   79 (369)
T ss_pred             cEEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCC-CCCCcccccccceEEEEeCCCCCccc
Confidence            799999887655  899999999999999999999999999999999887652 34688999999999999999999999


Q ss_pred             CCCEEEEEc-------------------------------------------------CCceeeeEEeecCCceeeCCCC
Q 020487           81 VGDQVCALL-------------------------------------------------GGGGYAEKVAVPAGQVLPVPSG  111 (325)
Q Consensus        81 ~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~  111 (325)
                      +||+|+.+.                                                 ..|+|+||+++++..++++|++
T Consensus        80 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  159 (369)
T cd08301          80 PGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPE  159 (369)
T ss_pred             cCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCC
Confidence            999998641                                                 1278999999999999999999


Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEe
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN  190 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (325)
                      +++++++.+++.+.++|.++....++++|++|+|+|+ |.+|++++|+|+.+|+ +|+++++++++.+.++++|++.+++
T Consensus       160 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~  238 (369)
T cd08301         160 APLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVN  238 (369)
T ss_pred             CCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence            9999999999999999998877788999999999987 9999999999999999 8999999999999999999998887


Q ss_pred             CCC--chHHHHHHHHhCCCcccEEEeCCChH-HHHHhhccccCC-CEEEEEeccCCc-ccccchHHHHhhccEeeecccc
Q 020487          191 YKT--EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNID-GRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLR  265 (325)
Q Consensus       191 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~  265 (325)
                      ...  ..+.+.+++.+++ ++|++|||+|.. .+..++++++++ |+++.+|..... ..+++...++ +++++.|+...
T Consensus       239 ~~~~~~~~~~~v~~~~~~-~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~  316 (369)
T cd08301         239 PKDHDKPVQEVIAEMTGG-GVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-NGRTLKGTLFG  316 (369)
T ss_pred             ccccchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-cCCeEEEEecC
Confidence            765  3456667777765 899999999865 467889999996 999999976532 2334444444 68899887654


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487          266 SRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIML  323 (325)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  323 (325)
                      .+..       +..++.+++++.+|.++.  +++++|+|+|+++|++.+++++.. |+++
T Consensus       317 ~~~~-------~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~  368 (369)
T cd08301         317 GYKP-------KTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL  368 (369)
T ss_pred             CCCh-------HHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence            4321       123444888888898654  578999999999999999988864 8876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8e-44  Score=316.21  Aligned_cols=301  Identities=20%  Similarity=0.271  Sum_probs=247.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhh-CCCCC-CCCCCCCCCCceeEEEEEecCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK-GSYPP-PKGASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      ||++++..++.   +++++.+.| +.++||+|||.++|||++|++.+. |..+. ...+|.++|||++|+|+++  ++++
T Consensus         5 ~~~~~~~~~~~---~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~   78 (343)
T PRK09880          5 TQSCVVAGKKD---VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG   78 (343)
T ss_pred             ceEEEEecCCc---eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence            57889886665   889999987 689999999999999999999875 43322 2246889999999999999  6788


Q ss_pred             CCCCCEEEEE--------------------------------cCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHH
Q 020487           79 WKVGDQVCAL--------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT  126 (325)
Q Consensus        79 ~~~Gd~V~~~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~  126 (325)
                      |++||+|...                                ..+|+|+||++++++.++++|+++++++++ +..++.+
T Consensus        79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~~~  157 (343)
T PRK09880         79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPLAV  157 (343)
T ss_pred             CCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHHHH
Confidence            9999999742                                125999999999999999999999987665 5667789


Q ss_pred             HHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhC
Q 020487          127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG  205 (325)
Q Consensus       127 a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  205 (325)
                      +|+++. .....+|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++++++++..++.+ +.+.. 
T Consensus       158 a~~al~-~~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~-~~~~~-  233 (343)
T PRK09880        158 AIHAAH-QAGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDH-YKAEK-  233 (343)
T ss_pred             HHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHH-HhccC-
Confidence            999984 445668999999997 9999999999999999 699999999999999999999999877655432 22222 


Q ss_pred             CCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHH
Q 020487          206 GKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVW  284 (325)
Q Consensus       206 ~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  284 (325)
                       .++|++|||+|.. .+..+++.++++|+++.+|.... ...++...++.+++++.++....           +.+++++
T Consensus       234 -g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~g~~~~~-----------~~~~~~~  300 (343)
T PRK09880        234 -GYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA-PPEFPMMTLIVKEISLKGSFRFT-----------EEFNTAV  300 (343)
T ss_pred             -CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CCccCHHHHHhCCcEEEEEeecc-----------ccHHHHH
Confidence             2599999999975 57888999999999999996543 34567777788899998875321           1244588


Q ss_pred             HHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          285 PAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       285 ~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++.+|++++  +++++|+++|+++|++.+.+++..||+++.|
T Consensus       301 ~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        301 SWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             HHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence            9999999875  6789999999999999999888789999986

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=2.9e-43  Score=315.47  Aligned_cols=310  Identities=26%  Similarity=0.349  Sum_probs=256.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++...+++  +++++.|.|+|.++||+||+.++|+|++|++.+.|.++.. .+|.++|||++|+|+++|++++.|+
T Consensus         3 ~~a~~~~~~~~~--~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~-~~p~v~G~E~~G~V~~vG~~v~~~~   79 (368)
T cd08300           3 CKAAVAWEAGKP--LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEG-LFPVILGHEGAGIVESVGEGVTSVK   79 (368)
T ss_pred             ceEEEEecCCCC--cEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccC-CCCceeccceeEEEEEeCCCCccCC
Confidence            789988876654  8899999999999999999999999999999998876533 4688999999999999999999999


Q ss_pred             CCCEEEEEc------------------------------------------------CCceeeeEEeecCCceeeCCCCC
Q 020487           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (325)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (325)
                      +||+|+...                                                ..|+|+||+.++++.++++|+++
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l  159 (368)
T cd08300          80 PGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEA  159 (368)
T ss_pred             CCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCC
Confidence            999998641                                                12589999999999999999999


Q ss_pred             CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      ++++++.+++++.++|+++.+...+++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+++++++
T Consensus       160 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~  238 (368)
T cd08300         160 PLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNP  238 (368)
T ss_pred             ChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcc
Confidence            999999999999999999877788999999999986 9999999999999999 79999999999999999999999987


Q ss_pred             CCc--hHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCC-CEEEEEeccCC-cccccchHHHHhhccEeeeccccc
Q 020487          192 KTE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRS  266 (325)
Q Consensus       192 ~~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~  266 (325)
                      ...  ++.+.+.+.+++ ++|++|||+|. ..+..++++++++ |+++.+|.... .....+...+. .+..+.++....
T Consensus       239 ~~~~~~~~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~  316 (368)
T cd08300         239 KDHDKPIQQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFGG  316 (368)
T ss_pred             cccchHHHHHHHHHhCC-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEecc
Confidence            653  467777777775 89999999996 4678889999886 99999987642 22223333333 334555554433


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          267 RSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      +..       .+.++++++++.+|++++  +++++|+|+|+++|++.+.+++. .|++++
T Consensus       317 ~~~-------~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         317 WKS-------RSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             cCc-------HHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence            221       123445889999999875  57899999999999999988765 588764

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.3e-43  Score=317.03  Aligned_cols=305  Identities=24%  Similarity=0.323  Sum_probs=252.2

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (325)
Q Consensus         2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (325)
                      ||+.+...+.+..+++.+.+.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|++
T Consensus         6 ~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~-~~~p~i~GhE~aG~Vv~vG~~v~~~~v   84 (375)
T PLN02178          6 KAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF-SRYPIIPGHEIVGIATKVGKNVTKFKE   84 (375)
T ss_pred             eeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC-CCCCcccCceeeEEEEEECCCCCccCC
Confidence            5555555555555888899999999999999999999999999999886532 235789999999999999999999999


Q ss_pred             CCEEEEE-----c------------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHH
Q 020487           82 GDQVCAL-----L------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT  126 (325)
Q Consensus        82 Gd~V~~~-----~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~  126 (325)
                      ||+|+..     |                              .+|+|+||++++++.++++|+++++++++++++...+
T Consensus        85 GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~t  164 (375)
T PLN02178         85 GDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGIT  164 (375)
T ss_pred             CCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchH
Confidence            9999741     1                              1589999999999999999999999999999999999


Q ss_pred             HHHHHHhhcC-CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh-HHHHHHcCCCEEEeCCCchHHHHHHHHh
Q 020487          127 VWSTVFMTSH-LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDLGADVCINYKTEDFVARVKEET  204 (325)
Q Consensus       127 a~~~l~~~~~-~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~  204 (325)
                      +|+++..... .++|++++|.|+ |++|++++|+|+.+|++|++++.++++ .+.++++|++++++....   +.+.+.+
T Consensus       165 a~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~---~~v~~~~  240 (375)
T PLN02178        165 VYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDS---QKMKEAV  240 (375)
T ss_pred             HHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCH---HHHHHhh
Confidence            9998854433 368999999997 999999999999999999998877554 677789999998876542   3455555


Q ss_pred             CCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHH
Q 020487          205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV  283 (325)
Q Consensus       205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  283 (325)
                      +  ++|++|||+|.. .+..++++++++|+++.+|.... ...++...++.+++++.|+.....          +.++++
T Consensus       241 ~--~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~  307 (375)
T PLN02178        241 G--TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK-PLDLPIFPLVLGRKMVGGSQIGGM----------KETQEM  307 (375)
T ss_pred             C--CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC-CCccCHHHHHhCCeEEEEeCccCH----------HHHHHH
Confidence            4  699999999976 56888999999999999987643 345667777788999988765432          123448


Q ss_pred             HHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          284 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       284 ~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ++++.+|++++.+ +.|+|+|+++|++.+.+++..||+|+.|
T Consensus       308 ~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        308 LEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             HHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            8999999998776 6799999999999999999889999875

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-43  Score=312.14  Aligned_cols=310  Identities=23%  Similarity=0.283  Sum_probs=253.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~-~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      |||+++..++.   +++++.+.|+| .++||+||+.++++|++|++.+.....  ..+|.++|||++|+|+++|++++.|
T Consensus         1 Mka~~~~~~~~---~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~   75 (347)
T PRK10309          1 MKSVVNDTDGI---VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA--HYYPITLGHEFSGYVEAVGSGVDDL   75 (347)
T ss_pred             CceEEEeCCCc---eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC--CCCCcccccceEEEEEEeCCCCCCC
Confidence            89999997664   89999999997 599999999999999999975432211  1247899999999999999999999


Q ss_pred             CCCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487           80 KVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (325)
Q Consensus        80 ~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~  132 (325)
                      ++||+|+.+.                           .+|+|++|+.++++.++++|+++++++++.+. +.++++.++ 
T Consensus        76 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~-  153 (347)
T PRK10309         76 HPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAF-  153 (347)
T ss_pred             CCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHH-
Confidence            9999998752                           25899999999999999999999999988764 456677775 


Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCccc-
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD-  210 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d-  210 (325)
                      ....++++++++|+|+ |.+|++++|+|+.+|++ |+++++++++++.++++|++++++.+... .+.+.+.+.+.++| 
T Consensus       154 ~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~-~~~~~~~~~~~~~d~  231 (347)
T PRK10309        154 HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMS-APQIQSVLRELRFDQ  231 (347)
T ss_pred             HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccC-HHHHHHHhcCCCCCe
Confidence            5677899999999986 99999999999999996 78888899999999999999998877655 55677777767888 


Q ss_pred             EEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccc---hHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHH
Q 020487          211 VILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELN---ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPA  286 (325)
Q Consensus       211 ~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (325)
                      ++|||+|.. .+..++++++++|+++.+|..... .+++   +..++.+++++.|+.........     .+.+++++++
T Consensus       232 ~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~~~~  305 (347)
T PRK10309        232 LILETAGVPQTVELAIEIAGPRAQLALVGTLHHD-LHLTSATFGKILRKELTVIGSWMNYSSPWP-----GQEWETASRL  305 (347)
T ss_pred             EEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-cccChhhhhHHhhcCcEEEEEeccccCCcc-----hhHHHHHHHH
Confidence            999999975 568889999999999999976542 1222   23567788999987654221111     1234458889


Q ss_pred             HHCCcc--ccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          287 IAVGKV--KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       287 ~~~g~l--~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +.+|.+  +++++++|+|+|+++|++.+.+++..||+|+.+
T Consensus       306 ~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        306 LTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             HHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            999987  467899999999999999999988889999875

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=2.4e-43  Score=310.88  Aligned_cols=298  Identities=23%  Similarity=0.291  Sum_probs=249.6

Q ss_pred             EEEEcCCCCC--cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            3 AIVITQPGSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         3 a~~~~~~~~~--~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |+.+..+|.+  ..+++++.|.|+|.++||+||+.++|+|++|.+.+.|.++.. .+|.++|||++|+|+++|++++.|+
T Consensus         1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~   79 (329)
T TIGR02822         1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVH-RPRVTPGHEVVGEVAGRGADAGGFA   79 (329)
T ss_pred             CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCC-CCCccCCcceEEEEEEECCCCcccC
Confidence            3556666654  469999999999999999999999999999999998876532 2468999999999999999999999


Q ss_pred             CCCEEEEE----------------------------cCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487           81 VGDQVCAL----------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (325)
Q Consensus        81 ~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~  132 (325)
                      +||+|+..                            ..+|+|++|+.+++..++++|+++++++++.+++.+.+||+++ 
T Consensus        80 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-  158 (329)
T TIGR02822        80 VGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRAL-  158 (329)
T ss_pred             CCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHH-
Confidence            99999741                            1258999999999999999999999999999999999999998 


Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      ...++++|++++|+|+ |++|++++|+|+..|++|+++++++++++.++++|++++++.....          .+++|++
T Consensus       159 ~~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~----------~~~~d~~  227 (329)
T TIGR02822       159 LRASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTP----------PEPLDAA  227 (329)
T ss_pred             HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccC----------cccceEE
Confidence            4678999999999998 9999999999999999999999999999999999999988743211          1368988


Q ss_pred             EeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCc
Q 020487          213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                      +++.+. ..+..++++++++|+++.+|........++...++.+++++.++.....          +.+.++++++.+|+
T Consensus       228 i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~l~~~g~  297 (329)
T TIGR02822       228 ILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTR----------ADAREFLELAAQHG  297 (329)
T ss_pred             EECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCH----------HHHHHHHHHHHhCC
Confidence            887764 4568889999999999999975433334566666778888888753211          12344788999999


Q ss_pred             cccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          292 VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       292 l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      ++ +++++|+|+|+++|++.+.+++..||+|+.
T Consensus       298 i~-~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~  329 (329)
T TIGR02822       298 VR-VTTHTYPLSEADRALRDLKAGRFDGAAVLV  329 (329)
T ss_pred             Ce-eEEEEEeHHHHHHHHHHHHcCCCceEEEeC
Confidence            87 457899999999999999999999999873

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=8.9e-43  Score=311.93  Aligned_cols=308  Identities=25%  Similarity=0.333  Sum_probs=257.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++...+++  +++++.|.|.|.++||+||+.++++|++|++.+.|..+  ..+|.++|||++|+|+++|+++++++
T Consensus         3 ~ka~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~   78 (365)
T cd08277           3 CKAAVAWEAGKP--LVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHEGAGIVESVGEGVTNLK   78 (365)
T ss_pred             cEEEEEccCCCC--cEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccceeEEEEeeCCCCccCC
Confidence            689988876654  88999999999999999999999999999999988765  34578999999999999999999999


Q ss_pred             CCCEEEEEc-----------------------------------------------CCceeeeEEeecCCceeeCCCCCC
Q 020487           81 VGDQVCALL-----------------------------------------------GGGGYAEKVAVPAGQVLPVPSGVS  113 (325)
Q Consensus        81 ~Gd~V~~~~-----------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~  113 (325)
                      +||+|+...                                               ..|+|+||+.++.+.++++|++++
T Consensus        79 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~  158 (365)
T cd08277          79 PGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP  158 (365)
T ss_pred             CCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence            999998741                                               137899999999999999999999


Q ss_pred             HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCC
Q 020487          114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYK  192 (325)
Q Consensus       114 ~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~  192 (325)
                      +++++.+..++.+||+++.+..++++|++++|+|+ |.+|++++++|+.+|+ +|+++++++++++.++++|++++++..
T Consensus       159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~  237 (365)
T cd08277         159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK  237 (365)
T ss_pred             HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence            99999999999999998877888999999999986 9999999999999999 799999999999999999999888766


Q ss_pred             Cc--hHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCC-CEEEEEeccCCcccccchHHHHhhccEeeeccccccc
Q 020487          193 TE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRS  268 (325)
Q Consensus       193 ~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  268 (325)
                      ..  .+.+.+.+.++ .++|++|||+|. ..+..++++++++ |+++.+|...+...+++...+.. ++++.++....+.
T Consensus       238 ~~~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~  315 (365)
T cd08277         238 DSDKPVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGFK  315 (365)
T ss_pred             cccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCCC
Confidence            53  34566777776 589999999995 4568889999885 99999987653333445545553 7888887654432


Q ss_pred             chhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487          269 TENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIML  323 (325)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  323 (325)
                      .       ...++.+++++.++.++  ++++++|+|+|+++|++.+++++. .|+++
T Consensus       316 ~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i  364 (365)
T cd08277         316 S-------RSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVI  364 (365)
T ss_pred             h-------HHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEee
Confidence            1       11234488888888754  578899999999999999988774 58876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=7.9e-43  Score=313.45  Aligned_cols=307  Identities=20%  Similarity=0.329  Sum_probs=241.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCC-------CCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEec
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIK-------DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVG   73 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~-------~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG   73 (325)
                      |||+++..+++   +++++.+.|+|+       ++||+|||.++|||++|++.+.|..+.  .+|.++|||++|+|+++|
T Consensus         3 mka~v~~~~~~---~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~--~~p~i~GhE~~G~V~~vG   77 (393)
T TIGR02819         3 NRGVVYLGPGK---VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA--PTGLVLGHEITGEVIEKG   77 (393)
T ss_pred             ceEEEEecCCc---eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCC--CCCccccceeEEEEEEEc
Confidence            89999987765   889999999874       689999999999999999999886542  358899999999999999


Q ss_pred             CCCCCCCCCCEEEEEc-------------------------------------CCceeeeEEeecCC--ceeeCCCCCCH
Q 020487           74 KNVSRWKVGDQVCALL-------------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSL  114 (325)
Q Consensus        74 ~~~~~~~~Gd~V~~~~-------------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~  114 (325)
                      +++++|++||||+...                                     .+|+|+||+.+++.  .++++|++++.
T Consensus        78 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~  157 (393)
T TIGR02819        78 RDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQA  157 (393)
T ss_pred             CccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccc
Confidence            9999999999996520                                     14899999999964  69999998653


Q ss_pred             ----HhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEE-EecChhhHHHHHHcCCCEEE
Q 020487          115 ----KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFV-TAGSEEKLAVCKDLGADVCI  189 (325)
Q Consensus       115 ----~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~-~~~~~~~~~~~~~~g~~~~~  189 (325)
                          ..++++..++.++|+++ ...++++|++++|.|+ |++|++++|+|+.+|+++++ +++++++++.++++|++.+.
T Consensus       158 ~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~  235 (393)
T TIGR02819       158 LEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVD  235 (393)
T ss_pred             cccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEEe
Confidence                34677888999999988 4578999999999776 99999999999999997544 55677899999999997543


Q ss_pred             eCCCchHHHHHHHHhCCCcccEEEeCCChH---------------HHHHhhccccCCCEEEEEeccCC-cccc-------
Q 020487          190 NYKTEDFVARVKEETGGKGVDVILDCMGAS---------------YFQRNLGSLNIDGRLFIIGTQGG-AKTE-------  246 (325)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~---------------~~~~~~~~l~~~g~~v~~g~~~~-~~~~-------  246 (325)
                      .....++.+.+.+.++++++|++|||+|.+               .+..+++.++++|+++.+|.+.. ....       
T Consensus       236 ~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~  315 (393)
T TIGR02819       236 LSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKT  315 (393)
T ss_pred             cCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccccc
Confidence            333445667778888877899999999974               57889999999999999998632 2111       


Q ss_pred             ----cchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccc--ccc-cccchhhHHHHHHHHHhCCCce
Q 020487          247 ----LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIY-KYLPLCEAAEAHQLMESSQHIG  319 (325)
Q Consensus       247 ----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~-~~~~l~~~~~a~~~~~~~~~~g  319 (325)
                          +....++.+++++.+....      .    .+....+++++.+|+++.  +++ ++|+|+++++|++.+.+++. .
T Consensus       316 ~~~~i~~~~~~~~~~~i~g~~~~------~----~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~  384 (393)
T TIGR02819       316 GSLSIRFGLGWAKSHSFHTGQTP------V----MKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-K  384 (393)
T ss_pred             cccccchHHhhccCceEEeccCC------h----hhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-e
Confidence                2223333445555542111      0    011223889999999764  455 78999999999999988754 7


Q ss_pred             eEEEeC
Q 020487          320 KIMLVP  325 (325)
Q Consensus       320 kvvi~~  325 (325)
                      |+++.|
T Consensus       385 Kvvi~~  390 (393)
T TIGR02819       385 KFVIDP  390 (393)
T ss_pred             EEEEeC
Confidence            999876

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3e-42  Score=306.06  Aligned_cols=314  Identities=20%  Similarity=0.233  Sum_probs=256.0

Q ss_pred             EEEEEcCCC----CCcceEEEee---cCCC-CCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCC--ceeEEEEE
Q 020487            2 KAIVITQPG----SPEVLQLQEV---EDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGL--ECSGTILS   71 (325)
Q Consensus         2 ~a~~~~~~~----~~~~l~~~~~---~~~~-~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~--e~~G~V~~   71 (325)
                      |.+++....    .+++|++++.   +.|. ++++||+||+.++++|+.|+..+.+..+. ...|.++|+  |++|+|..
T Consensus        10 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~-~~~p~~~G~~~~~~G~v~~   88 (348)
T PLN03154         10 KQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDS-YLPPFVPGQRIEGFGVSKV   88 (348)
T ss_pred             eEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCC-CCCCcCCCCeeEeeEEEEE
Confidence            556664222    3467888884   5553 47999999999999999998754432221 124778998  88999999


Q ss_pred             ecCCCCCCCCCCEEEEEcCCceeeeEEeecCCc--eee--CCCCCCHH-hhccCcchHHHHHHHHHhhcCCCCCCEEEEE
Q 020487           72 VGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQ--VLP--VPSGVSLK-DAAAFPEVACTVWSTVFMTSHLSPGESFLVH  146 (325)
Q Consensus        72 vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~--~~~--~p~~~~~~-~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~  146 (325)
                      +|+++++|++||+|+++   |+|++|.+++...  +++  +|++++++ +++++++++.|||+++.+...+++|++|+|+
T Consensus        89 vg~~v~~~~~Gd~V~~~---~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~  165 (348)
T PLN03154         89 VDSDDPNFKPGDLISGI---TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVS  165 (348)
T ss_pred             EecCCCCCCCCCEEEec---CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEe
Confidence            99999999999999887   7899999998753  544  59999986 6888999999999999888889999999999


Q ss_pred             cCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEEeCCC-chHHHHHHHHhCCCcccEEEeCCChHHHHHh
Q 020487          147 GGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASYFQRN  224 (325)
Q Consensus       147 g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~  224 (325)
                      |++|++|++++|+|+.+|++|++++.++++.+.++ ++|++.++++.. ..+.+.+.+.++ +++|++|||+|+..+...
T Consensus       166 GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~gvD~v~d~vG~~~~~~~  244 (348)
T PLN03154        166 AASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFP-EGIDIYFDNVGGDMLDAA  244 (348)
T ss_pred             cCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCC-CCcEEEEECCCHHHHHHH
Confidence            99999999999999999999999999999999887 799999998875 366677777765 589999999999888999


Q ss_pred             hccccCCCEEEEEeccCCccc-----ccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccc
Q 020487          225 LGSLNIDGRLFIIGTQGGAKT-----ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKY  299 (325)
Q Consensus       225 ~~~l~~~g~~v~~g~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~  299 (325)
                      +++++++|+++.+|...+...     ..+...++.+++++.|+....+.     ....+.++++++++.+|++++.+..+
T Consensus       245 ~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~-----~~~~~~~~~~~~l~~~G~l~~~~~~~  319 (348)
T PLN03154        245 LLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYL-----HLFPQFLENVSRYYKQGKIVYIEDMS  319 (348)
T ss_pred             HHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHH-----HHHHHHHHHHHHHHHCCCccCceecc
Confidence            999999999999987654321     12455677788999887643221     11234566689999999999888889


Q ss_pred             cchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          300 LPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       300 ~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      |+|+++++|++.+++++..||+|+++
T Consensus       320 ~~L~~~~~A~~~l~~g~~~GKvVl~~  345 (348)
T PLN03154        320 EGLESAPAALVGLFSGKNVGKQVIRV  345 (348)
T ss_pred             cCHHHHHHHHHHHHcCCCCceEEEEe
Confidence            99999999999999999999999874

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=3e-42  Score=305.81  Aligned_cols=314  Identities=25%  Similarity=0.269  Sum_probs=256.2

Q ss_pred             EEEEEcCCCCCcceEEEeecC----CCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCce--eEEEEEecCC
Q 020487            2 KAIVITQPGSPEVLQLQEVED----PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLEC--SGTILSVGKN   75 (325)
Q Consensus         2 ~a~~~~~~~~~~~l~~~~~~~----~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~--~G~V~~vG~~   75 (325)
                      |++....+ .++.|++++.+.    |+|+++||+|||.+++||+.|++...|..+.....|+++|++.  .|.+..+|+.
T Consensus         9 ~~~~~~~~-~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~   87 (338)
T cd08295           9 KAYVTGFP-KESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSG   87 (338)
T ss_pred             ecCCCCCC-CccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecC
Confidence            44443332 246799999987    8899999999999999999999998885432223477889754  4566667888


Q ss_pred             CCCCCCCCEEEEEcCCceeeeEEeecC-CceeeCC-CCCCHH-hhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchH
Q 020487           76 VSRWKVGDQVCALLGGGGYAEKVAVPA-GQVLPVP-SGVSLK-DAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI  152 (325)
Q Consensus        76 ~~~~~~Gd~V~~~~~~g~~~~~~~~~~-~~~~~~p-~~~~~~-~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~  152 (325)
                      ++.|++||+|+++   |+|+||+++++ ..++++| +++++. +++++++++.|||+++.+..++++|++++|+|++|++
T Consensus        88 v~~~~vGd~V~~~---g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~v  164 (338)
T cd08295          88 NPDFKVGDLVWGF---TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAV  164 (338)
T ss_pred             CCCCCCCCEEEec---CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHH
Confidence            8899999999987   78999999999 7999995 678876 7889999999999999888899999999999999999


Q ss_pred             HHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEEEeCCC-chHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccC
Q 020487          153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI  230 (325)
Q Consensus       153 G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~  230 (325)
                      |.+++|+|+.+|++|+++++++++.+.+++ +|+++++++.. .++.+.+.+.++ +++|++||++|+..+...++++++
T Consensus       165 G~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~gvd~v~d~~g~~~~~~~~~~l~~  243 (338)
T cd08295         165 GQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFP-NGIDIYFDNVGGKMLDAVLLNMNL  243 (338)
T ss_pred             HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCC-CCcEEEEECCCHHHHHHHHHHhcc
Confidence            999999999999999999999999999988 99999998654 466777777765 689999999999888999999999


Q ss_pred             CCEEEEEeccCCccc-----ccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhH
Q 020487          231 DGRLFIIGTQGGAKT-----ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEA  305 (325)
Q Consensus       231 ~g~~v~~g~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~  305 (325)
                      +|+++.+|.......     ..+...+..+++++.++......     ....+.++++++++.+|.+++.+...|+++++
T Consensus       244 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~  318 (338)
T cd08295         244 HGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYL-----HRYPEFLEEMSGYIKEGKLKYVEDIADGLESA  318 (338)
T ss_pred             CcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhH-----HHHHHHHHHHHHHHHCCCeEceeecccCHHHH
Confidence            999999986543211     12344556677777775443221     12334566688999999998877677999999


Q ss_pred             HHHHHHHHhCCCceeEEEeC
Q 020487          306 AEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       306 ~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ++|++.+.+++..||+|+..
T Consensus       319 ~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         319 PEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHHHHHHhcCCCCceEEEEC
Confidence            99999999999899999863

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.9e-42  Score=308.69  Aligned_cols=304  Identities=21%  Similarity=0.280  Sum_probs=254.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      ++|+++..++..  +++++.+.|+|+++||+||+.++++|++|++.+.|.++.. .+|.++|||++|+|+++|++++.|+
T Consensus        10 ~~~~~~~~~~~~--~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~-~~p~i~G~E~~G~Vv~vG~~v~~~~   86 (357)
T PLN02514         10 TTGWAARDPSGH--LSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMS-NYPMVPGHEVVGEVVEVGSDVSKFT   86 (357)
T ss_pred             EEEEEEecCCCC--ceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcC-CCCccCCceeeEEEEEECCCccccc
Confidence            478888888865  8899999999999999999999999999999988866432 3578999999999999999999999


Q ss_pred             CCCEEEEE-----c------------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHH
Q 020487           81 VGDQVCAL-----L------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC  125 (325)
Q Consensus        81 ~Gd~V~~~-----~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~  125 (325)
                      +||+|+..     |                              .+|+|++|++++.+.++++|+++++++++.++..+.
T Consensus        87 ~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  166 (357)
T PLN02514         87 VGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGV  166 (357)
T ss_pred             CCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHH
Confidence            99999731     1                              248999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH-HHcCCCEEEeCCCchHHHHHHHHh
Q 020487          126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADVCINYKTEDFVARVKEET  204 (325)
Q Consensus       126 ~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~  204 (325)
                      +||.++......++|++++|+|+ |++|++++|+|+.+|++|++++.+++++..+ +++|++.+++....   +.+.+.+
T Consensus       167 ta~~al~~~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~---~~~~~~~  242 (357)
T PLN02514        167 TVYSPLSHFGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDA---AEMQEAA  242 (357)
T ss_pred             HHHHHHHHcccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCCh---HHHHHhc
Confidence            99999866666689999999976 9999999999999999999998888776555 56999877765442   2344444


Q ss_pred             CCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHH
Q 020487          205 GGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV  283 (325)
Q Consensus       205 ~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  283 (325)
                      +  ++|++|||+|. ..+..++++++++|+++.+|.... ...++...++.+++++.++.....          +.++++
T Consensus       243 ~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~  309 (357)
T PLN02514        243 D--SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT-PLQFVTPMLMLGRKVITGSFIGSM----------KETEEM  309 (357)
T ss_pred             C--CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC-CCcccHHHHhhCCcEEEEEecCCH----------HHHHHH
Confidence            3  69999999996 467888999999999999997643 334666677788999998865432          123448


Q ss_pred             HHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          284 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       284 ~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ++++.+|++.+.+ ++|+|+|+++|++.+.+++..||+++.|
T Consensus       310 ~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~  350 (357)
T PLN02514        310 LEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_pred             HHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEc
Confidence            8999999998776 5899999999999999998889999875

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=3.7e-42  Score=306.82  Aligned_cols=307  Identities=31%  Similarity=0.465  Sum_probs=260.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCC-C--CC-------CCCCCCCCCCceeEEEE
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGS-Y--PP-------PKGASPYPGLECSGTIL   70 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~-~--~~-------~~~~p~~~G~e~~G~V~   70 (325)
                      |||+++..++.   +++++.+.|+|.++||+||+.++++|++|++.+.+. .  +.       ...+|.++|||++|+|+
T Consensus         1 mka~~~~~~~~---l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~   77 (351)
T cd08233           1 MKAARYHGRKD---IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVV   77 (351)
T ss_pred             CceEEEecCCc---eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEE
Confidence            89999987654   899999999999999999999999999998876532 1  10       11257899999999999


Q ss_pred             EecCCCCCCCCCCEEEEEc----------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcc
Q 020487           71 SVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE  122 (325)
Q Consensus        71 ~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  122 (325)
                      ++|++++.|++||+|+...                            .+|+|++|+.++...++++|+++++++++.+ .
T Consensus        78 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~  156 (351)
T cd08233          78 EVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-E  156 (351)
T ss_pred             EeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-c
Confidence            9999999999999998621                            1589999999999999999999999988765 6


Q ss_pred             hHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHH
Q 020487          123 VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK  201 (325)
Q Consensus       123 ~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  201 (325)
                      +..+||.++ ...++++|++++|+|+ |.+|++++|+|+.+|+ +|+++++++++.+.++++|++.+++++...+.+.+.
T Consensus       157 ~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l~  234 (351)
T cd08233         157 PLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEVR  234 (351)
T ss_pred             HHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHHH
Confidence            778999998 7788999999999986 9999999999999999 899999999999999999999999988888888888


Q ss_pred             HHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHH
Q 020487          202 EETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE  280 (325)
Q Consensus       202 ~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  280 (325)
                      +.++++++|+++||+|. ..+..++++++++|+++.+|... ....++...+..+++++.+......          +.+
T Consensus       235 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~----------~~~  303 (351)
T cd08233         235 KLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWE-KPISFNPNDLVLKEKTLTGSICYTR----------EDF  303 (351)
T ss_pred             HHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCC-CCCccCHHHHHhhCcEEEEEeccCc----------chH
Confidence            88887789999999985 56788899999999999999765 3345667777788999988754321          234


Q ss_pred             HHHHHHHHCCccc--cccccccchhhH-HHHHHHHHhCCCc-eeEEEe
Q 020487          281 KNVWPAIAVGKVK--PVIYKYLPLCEA-AEAHQLMESSQHI-GKIMLV  324 (325)
Q Consensus       281 ~~~~~~~~~g~l~--~~~~~~~~l~~~-~~a~~~~~~~~~~-gkvvi~  324 (325)
                      +++++++.+|.++  +.++++|+++|+ ++|++.+.+++.. +|+|+.
T Consensus       304 ~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~  351 (351)
T cd08233         304 EEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS  351 (351)
T ss_pred             HHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence            4589999999985  457889999997 7899999988874 899873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=1.5e-41  Score=299.69  Aligned_cols=320  Identities=33%  Similarity=0.489  Sum_probs=276.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC--CCCCCCCCCCceeEEEEEecCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      |||+++.+++.++.+++.+.+.|.+.++||+|++.++++|++|++...|..+.  ....|.++|||++|+|+++|+++..
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            89999988777777888888887789999999999999999999988886543  2234678999999999999999999


Q ss_pred             CCCCCEEEEEcC--CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHH
Q 020487           79 WKVGDQVCALLG--GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFA  156 (325)
Q Consensus        79 ~~~Gd~V~~~~~--~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~  156 (325)
                      +++||+|+++..  .|+|++|+.++.+.++++|+++++.+++++++.+++|| ++....+++++++++|+|++|.+|.++
T Consensus        81 ~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~  159 (324)
T cd08244          81 AWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLL  159 (324)
T ss_pred             CCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHH
Confidence            999999999862  58999999999999999999999999999999999995 455778899999999999999999999


Q ss_pred             HHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEE
Q 020487          157 IQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI  236 (325)
Q Consensus       157 ~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~  236 (325)
                      +++|+.+|++|+++++++++.+.++++|++.+++.+...+...+.+.++++++|+++||+|+......+++++++|+++.
T Consensus       160 ~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~  239 (324)
T cd08244         160 VQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLT  239 (324)
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHHhccCcEEEE
Confidence            99999999999999999999999999999888888777777788888887889999999999888888999999999999


Q ss_pred             EeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCC
Q 020487          237 IGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQ  316 (325)
Q Consensus       237 ~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~  316 (325)
                      +|........++...++.+++++.++.......    ....+.++.+.+++.++.+.+.+...|+++++++|++.+.+++
T Consensus       240 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~  315 (324)
T cd08244         240 YGWASGEWTALDEDDARRRGVTVVGLLGVQAER----GGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHAALEARS  315 (324)
T ss_pred             EecCCCCCCccCHHHHhhCCcEEEEeecccCCH----HHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHHHHHcCC
Confidence            987654333445455567888888776543321    2345566778899999999877889999999999999999999


Q ss_pred             CceeEEEeC
Q 020487          317 HIGKIMLVP  325 (325)
Q Consensus       317 ~~gkvvi~~  325 (325)
                      ..+|++++|
T Consensus       316 ~~~kvv~~~  324 (324)
T cd08244         316 TVGKVLLLP  324 (324)
T ss_pred             CCceEEEeC
Confidence            999999987

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=5.1e-42  Score=304.90  Aligned_cols=324  Identities=28%  Similarity=0.356  Sum_probs=273.9

Q ss_pred             CEEEEEcCCCCC-cceEEEeecCCCCCC-CeEEEEEeeeecChhhhhhhhCCCCCCCC----CCCCCCCceeEEEEEecC
Q 020487            1 MKAIVITQPGSP-EVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPPPKG----ASPYPGLECSGTILSVGK   74 (325)
Q Consensus         1 m~a~~~~~~~~~-~~l~~~~~~~~~~~~-~ev~v~v~~~~i~~~D~~~~~g~~~~~~~----~p~~~G~e~~G~V~~vG~   74 (325)
                      |||+++...+.+ +.+++++.|.|+|.+ +||+||+.++++|++|+..+.|..+....    +|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            999999988765 468999999998887 99999999999999999999887653322    567899999999999999


Q ss_pred             CCCCCCCCCEEEEEc-CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHH
Q 020487           75 NVSRWKVGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIG  153 (325)
Q Consensus        75 ~~~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G  153 (325)
                      ++..|++||+|++.. ..|+|++|+.++.+.++++|+++++++++.++....++|.++.....++++++|+|+|++|.+|
T Consensus        81 ~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg  160 (341)
T cd08290          81 GVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVG  160 (341)
T ss_pred             CCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHH
Confidence            999999999999886 3689999999999999999999999999999999999999997778899999999999999999


Q ss_pred             HHHHHHHHHCCCEEEEEecCh----hhHHHHHHcCCCEEEeCCCc---hHHHHHHHHhCCCcccEEEeCCChHHHHHhhc
Q 020487          154 TFAIQMGKCQGVRVFVTAGSE----EKLAVCKDLGADVCINYKTE---DFVARVKEETGGKGVDVILDCMGASYFQRNLG  226 (325)
Q Consensus       154 ~~~~~~a~~~g~~v~~~~~~~----~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~  226 (325)
                      ++++++|+..|+++++++.++    ++.+.++++|++++++....   .+...+....++ ++|+++||+|+..+...++
T Consensus       161 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~  239 (341)
T cd08290         161 QAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGG-RPKLALNCVGGKSATELAR  239 (341)
T ss_pred             HHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCC-CceEEEECcCcHhHHHHHH
Confidence            999999999999999998776    56778888999999887765   667777777766 8999999999988888899


Q ss_pred             cccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccccccccc---chh
Q 020487          227 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL---PLC  303 (325)
Q Consensus       227 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~---~l~  303 (325)
                      +++++|+++.+|........++....+.+++++.+...........+......++.+.+++.+|.+.+.....+   +++
T Consensus       240 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  319 (341)
T cd08290         240 LLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLE  319 (341)
T ss_pred             HhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHH
Confidence            99999999999865433334555566778999988765433210112334456677889999999887766677   999


Q ss_pred             hHHHHHHHHHhCCCceeEEEeC
Q 020487          304 EAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       304 ~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++++++.+.+++..+|+|+.+
T Consensus       320 ~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         320 EFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             HHHHHHHHHhhcCCCCeEEEeC
Confidence            9999999999988889999864

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2e-41  Score=300.23  Aligned_cols=324  Identities=43%  Similarity=0.735  Sum_probs=277.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++...+....+++++.+.|++.++||+||+.++++|+.|+....+..+.....|.++|+|++|+|+++|+++..++
T Consensus         2 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   81 (334)
T PTZ00354          2 MRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRFK   81 (334)
T ss_pred             cEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCCC
Confidence            89999998887767888888888899999999999999999999998887654444567899999999999999999999


Q ss_pred             CCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG  160 (325)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a  160 (325)
                      +||+|+++..+|+|++|++++.+.++++|++++..+++.++.++.+||+++.....++++++++|+|++|.+|++++++|
T Consensus        82 ~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a  161 (334)
T PTZ00354         82 EGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLA  161 (334)
T ss_pred             CCCEEEEecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHH
Confidence            99999998767999999999999999999999999999999999999999877788999999999999999999999999


Q ss_pred             HHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCch-HHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEec
Q 020487          161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED-FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      +.+|++++++++++++.+.++++|.+.+++....+ +.+.+.+.++++++|++++|.++..+..++++++++|+++.+|.
T Consensus       162 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~  241 (334)
T PTZ00354        162 EKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGF  241 (334)
T ss_pred             HHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhccCCeEEEEec
Confidence            99999988899999999999999998888776654 67778888877889999999998888889999999999999986


Q ss_pred             cCCcccc-cchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCc
Q 020487          240 QGGAKTE-LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHI  318 (325)
Q Consensus       240 ~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~  318 (325)
                      ....... ++...+..++.++.+...........+......++.+++++.++.+.+.+.+.+++++++++++.+.+++..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (334)
T PTZ00354        242 MGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNI  321 (334)
T ss_pred             CCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCC
Confidence            5443322 566666667778887765443222223344556677889999999988788999999999999999988878


Q ss_pred             eeEEEe
Q 020487          319 GKIMLV  324 (325)
Q Consensus       319 gkvvi~  324 (325)
                      +|+++.
T Consensus       322 ~kvvv~  327 (334)
T PTZ00354        322 GKVVLT  327 (334)
T ss_pred             ceEEEe
Confidence            898874

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=2.5e-42  Score=308.16  Aligned_cols=302  Identities=21%  Similarity=0.251  Sum_probs=236.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCC--CCCCCCCCceeEEEEEecCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPK--GASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      |||+++...+ ++ +++++.|.|+|+++||+|||.++|||++|++.+.|.++..+  .+|.++|||++|+|+++|++ +.
T Consensus         1 mka~~~~~~~-~~-l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~   77 (355)
T cd08230           1 MKAIAVKPGK-PG-VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SG   77 (355)
T ss_pred             CceeEecCCC-CC-CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CC
Confidence            8999998533 34 99999999999999999999999999999999998754322  35789999999999999999 99


Q ss_pred             CCCCCEEEEEc------------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHH
Q 020487           79 WKVGDQVCALL------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW  128 (325)
Q Consensus        79 ~~~Gd~V~~~~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~  128 (325)
                      |++||+|+...                              .+|+|++|++++++.++++|++++ + ++++..+.++++
T Consensus        78 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~-~a~~~~p~~~~~  155 (355)
T cd08230          78 LSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-D-VGVLLEPLSVVE  155 (355)
T ss_pred             CCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-c-ceeecchHHHHH
Confidence            99999998632                              248899999999999999999998 3 444555666655


Q ss_pred             HHHHh------hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec---ChhhHHHHHHcCCCEEEeCCCchHHHH
Q 020487          129 STVFM------TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDLGADVCINYKTEDFVAR  199 (325)
Q Consensus       129 ~~l~~------~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~  199 (325)
                      .++..      ...+++|++|+|+|+ |++|++++|+|+.+|++|+++++   ++++++.++++|++. +++....+.+ 
T Consensus       156 ~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~~~~-  232 (355)
T cd08230         156 KAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTPVAE-  232 (355)
T ss_pred             HHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCccchhh-
Confidence            54422      223578999999997 99999999999999999999987   678889999999986 4554444332 


Q ss_pred             HHHHhCCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCC-cccccc----hHHHHhhccEeeecccccccchhHH
Q 020487          200 VKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGG-AKTELN----ITSLFAKRLTVQAAGLRSRSTENKA  273 (325)
Q Consensus       200 ~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~  273 (325)
                       ...  ..++|++|||+|.. .+..+++.++++|+++++|.... ....++    ...++.+++++.|+......     
T Consensus       233 -~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~-----  304 (355)
T cd08230         233 -VKL--VGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKR-----  304 (355)
T ss_pred             -hhh--cCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchh-----
Confidence             111  24799999999975 57888999999999999997665 223344    34567789999997543321     


Q ss_pred             HHHHHHHHHHHHHHHCCc------cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          274 LIVSEVEKNVWPAIAVGK------VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       274 ~~~~~~~~~~~~~~~~g~------l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                       .+    +.+++++.++.      +++.++++|+++|+++|++.++++.  .|+|+++
T Consensus       305 -~~----~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         305 -HF----EQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             -hH----HHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence             12    22566666554      6667899999999999999887554  4999864

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=4.3e-42  Score=305.82  Aligned_cols=305  Identities=22%  Similarity=0.365  Sum_probs=253.5

Q ss_pred             EEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCC
Q 020487            4 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD   83 (325)
Q Consensus         4 ~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   83 (325)
                      +++.+++++  +++++.|.|+|.++||+||+.++|+|++|++.+.+.......+|.++|||++|+|+++|+++..+ +||
T Consensus         2 ~~~~~~g~~--~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~Gd   78 (349)
T TIGR03201         2 WMMTEPGKP--MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGK   78 (349)
T ss_pred             ceEecCCCC--ceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCC
Confidence            455666654  88899999999999999999999999999998754433223457899999999999999999877 999


Q ss_pred             EEEEE----------c-----------------CCceeeeEEeecCCceeeCCC------CCCHHhhccCcchHHHHHHH
Q 020487           84 QVCAL----------L-----------------GGGGYAEKVAVPAGQVLPVPS------GVSLKDAAAFPEVACTVWST  130 (325)
Q Consensus        84 ~V~~~----------~-----------------~~g~~~~~~~~~~~~~~~~p~------~~~~~~aa~l~~~~~~a~~~  130 (325)
                      +|+..          |                 .+|+|++|+.++.+.++++|+      ++++++++.++.++.++|.+
T Consensus        79 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a  158 (349)
T TIGR03201        79 AVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQA  158 (349)
T ss_pred             EEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHH
Confidence            99861          1                 258999999999999999999      89999999999999999999


Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCc---hHHHHHHHHhCCC
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE---DFVARVKEETGGK  207 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~  207 (325)
                      +. ...+++|++|+|+|+ |++|++++|+|+..|++|+++++++++++.++++|++++++....   .+.+.+.+.++++
T Consensus       159 ~~-~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~  236 (349)
T TIGR03201       159 AV-QAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKAR  236 (349)
T ss_pred             HH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccC
Confidence            84 578899999999999 999999999999999999999999999999999999988876553   4566677777777


Q ss_pred             ccc----EEEeCCChHH-HHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHH
Q 020487          208 GVD----VILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKN  282 (325)
Q Consensus       208 ~~d----~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  282 (325)
                      ++|    ++|||+|... +..++++++++|+++.+|..... ..++...++.++.++.+......          +.++.
T Consensus       237 g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~g~~~~~~----------~~~~~  305 (349)
T TIGR03201       237 GLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAK-TEYRLSNLMAFHARALGNWGCPP----------DRYPA  305 (349)
T ss_pred             CCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCC-cccCHHHHhhcccEEEEEecCCH----------HHHHH
Confidence            886    8999999765 56789999999999999976532 34556666667788877653211          12444


Q ss_pred             HHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          283 VWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       283 ~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++++.+|++.+  ++ +.|+|+++++|++.+++++..||++++|
T Consensus       306 ~~~~i~~g~i~~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       306 ALDLVLDGKIQLGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             HHHHHHcCCCCcccce-EEecHHHHHHHHHHHHcCCccceEEecC
Confidence            889999999864  44 4799999999999999999889999876

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=7.4e-42  Score=310.03  Aligned_cols=311  Identities=24%  Similarity=0.315  Sum_probs=248.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhh-hCCCCC-----CCCCCCCCCCceeEEEEEecC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQR-KGSYPP-----PKGASPYPGLECSGTILSVGK   74 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~-~g~~~~-----~~~~p~~~G~e~~G~V~~vG~   74 (325)
                      ||++++..++.   +++++.|.|+|+++||+|||.++|||++|++.+ .|....     ...+|.++|||++|+|+++|+
T Consensus         3 ~~a~~~~~~~~---l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~   79 (410)
T cd08238           3 TKAWRMYGKGD---LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK   79 (410)
T ss_pred             cEEEEEEcCCc---eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence            68888887664   999999999999999999999999999999976 454211     013578999999999999999


Q ss_pred             CCC-CCCCCCEEEEEc----------------CCceeeeEEeecCC----ceeeCCCCCCHHhhccCcchHH--HHHHHH
Q 020487           75 NVS-RWKVGDQVCALL----------------GGGGYAEKVAVPAG----QVLPVPSGVSLKDAAAFPEVAC--TVWSTV  131 (325)
Q Consensus        75 ~~~-~~~~Gd~V~~~~----------------~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~l~~~~~--~a~~~l  131 (325)
                      +++ +|++||+|+...                .+|+|++|++++++    .++++|+++++++++.+....+  +++.++
T Consensus        80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~  159 (410)
T cd08238          80 KWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTAN  159 (410)
T ss_pred             CccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhhhc
Confidence            998 699999998742                25899999999987    6899999999998885422222  233332


Q ss_pred             --------HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEecChhhHHHHHHc--------CCC-EEEeC
Q 020487          132 --------FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV---RVFVTAGSEEKLAVCKDL--------GAD-VCINY  191 (325)
Q Consensus       132 --------~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~---~v~~~~~~~~~~~~~~~~--------g~~-~~~~~  191 (325)
                              ...+++++|++++|+|++|++|++++|+|+..|+   +|++++.++++++.++++        |++ .+++.
T Consensus       160 ~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~  239 (410)
T cd08238         160 YHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNP  239 (410)
T ss_pred             ccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECC
Confidence                    2456789999999999889999999999999864   799999999999999886        665 45665


Q ss_pred             CC-chHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCC-c-ccccchHHHHhhccEeeecccccc
Q 020487          192 KT-EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-A-KTELNITSLFAKRLTVQAAGLRSR  267 (325)
Q Consensus       192 ~~-~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~-~~~~~~~~~~~~~~~i~~~~~~~~  267 (325)
                      .. .++.+.+.+.+++.++|++|+++|. ..+..++++++++|+++.++.... . ..+++...++.+++++.|+.....
T Consensus       240 ~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  319 (410)
T cd08238         240 ATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGNT  319 (410)
T ss_pred             CccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCCCH
Confidence            54 4567778888888889999999985 567888999999999887754322 1 235666777889999999754321


Q ss_pred             cchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          268 STENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                                +.++++++++.+|++++  +++++|+|+|+++|++.+. ++..||+|+.|
T Consensus       320 ----------~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~  368 (410)
T cd08238         320 ----------DDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYT  368 (410)
T ss_pred             ----------HHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEEC
Confidence                      22344889999999876  6799999999999999998 77789999875

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=2.3e-41  Score=299.22  Aligned_cols=309  Identities=23%  Similarity=0.275  Sum_probs=255.7

Q ss_pred             CEEEEEcCC--CCC--cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCC
Q 020487            1 MKAIVITQP--GSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV   76 (325)
Q Consensus         1 m~a~~~~~~--~~~--~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~   76 (325)
                      ||+|++...  +++  +.+++++.+.|+|+++||+|||.++|||+.|.+...+  +  ..+|.++|+|++|+|++   .+
T Consensus         3 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~--~--~~~p~v~G~e~~G~V~~---~~   75 (329)
T cd08294           3 AKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR--L--NEGDTMIGTQVAKVIES---KN   75 (329)
T ss_pred             ceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc--C--CCCCcEecceEEEEEec---CC
Confidence            899999983  444  7899999999999999999999999999987652211  1  12477899999999985   44


Q ss_pred             CCCCCCCEEEEEcCCceeeeEEeecCC---ceeeCCCCCC-----HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcC
Q 020487           77 SRWKVGDQVCALLGGGGYAEKVAVPAG---QVLPVPSGVS-----LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGG  148 (325)
Q Consensus        77 ~~~~~Gd~V~~~~~~g~~~~~~~~~~~---~~~~~p~~~~-----~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~  148 (325)
                      +.|++||+|+++   ++|++|++++.+   .++++|++++     ...+++++.+++|||+++.+..++++|++++|+|+
T Consensus        76 ~~~~~Gd~V~~~---~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga  152 (329)
T cd08294          76 SKFPVGTIVVAS---FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGA  152 (329)
T ss_pred             CCCCCCCEEEee---CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence            679999999987   579999999999   9999999988     23334688899999999988889999999999999


Q ss_pred             CchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccc
Q 020487          149 SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSL  228 (325)
Q Consensus       149 ~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l  228 (325)
                      +|.+|.+++|+|+..|++|+++++++++.+.++++|+++++++...++.+.+.+.++ +++|+++||+|+..+...++++
T Consensus       153 ~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~-~gvd~vld~~g~~~~~~~~~~l  231 (329)
T cd08294         153 AGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAP-DGIDCYFDNVGGEFSSTVLSHM  231 (329)
T ss_pred             ccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCC-CCcEEEEECCCHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999888888888877776 6899999999998889999999


Q ss_pred             cCCCEEEEEeccCCcc-c-----ccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccch
Q 020487          229 NIDGRLFIIGTQGGAK-T-----ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPL  302 (325)
Q Consensus       229 ~~~g~~v~~g~~~~~~-~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l  302 (325)
                      +++|+++.+|...... .     ......+..+++++.++.....     .....+.++.+++++.+|.+.+.+..+|++
T Consensus       232 ~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l  306 (329)
T cd08294         232 NDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRW-----QDRWPEALKQLLKWIKEGKLKYREHVTEGF  306 (329)
T ss_pred             ccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhh-----HHHHHHHHHHHHHHHHCCCCcCCcccccCH
Confidence            9999999998543211 0     1223345667788877644322     122345566788999999998777678999


Q ss_pred             hhHHHHHHHHHhCCCceeEEEeC
Q 020487          303 CEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       303 ~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++++|++.+.+++..||+|+++
T Consensus       307 ~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         307 ENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             HHHHHHHHHHHcCCCCCeEEEeC
Confidence            99999999999999999999864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=2.8e-41  Score=302.25  Aligned_cols=309  Identities=27%  Similarity=0.419  Sum_probs=257.5

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCC---
Q 020487            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR---   78 (325)
Q Consensus         2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~---   78 (325)
                      ||+++..+++  .+++++.+.|+|.++||+||+.++++|++|++...|.++. ..+|.++|||++|+|+++|++++.   
T Consensus         2 ka~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~   78 (361)
T cd08231           2 RAAVLTGPGK--PLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHEGVGRVVALGGGVTTDVA   78 (361)
T ss_pred             eEEEEcCCCC--CCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccCCceEEEEeCCCcccccc
Confidence            7899998774  3999999999999999999999999999999999887753 335789999999999999999976   


Q ss_pred             ---CCCCCEEEEEc----------------------------------CCceeeeEEeecCC-ceeeCCCCCCHHhhccC
Q 020487           79 ---WKVGDQVCALL----------------------------------GGGGYAEKVAVPAG-QVLPVPSGVSLKDAAAF  120 (325)
Q Consensus        79 ---~~~Gd~V~~~~----------------------------------~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~l  120 (325)
                         |++||+|+.+.                                  ..|+|++|+.++++ .++++|++++..+++++
T Consensus        79 ~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~  158 (361)
T cd08231          79 GEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPA  158 (361)
T ss_pred             CCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHh
Confidence               99999998762                                  24899999999996 79999999999999988


Q ss_pred             cchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchH---
Q 020487          121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDF---  196 (325)
Q Consensus       121 ~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---  196 (325)
                      ++++.+||.++......++++++||+|+ |.+|++++++|+..|+ +|+++++++++.+.++++|++.+++.+....   
T Consensus       159 ~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~  237 (361)
T cd08231         159 NCALATVLAALDRAGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQR  237 (361)
T ss_pred             cCHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHH
Confidence            8999999999977766779999999985 9999999999999999 9999999999999999999998887765433   


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCC-cccccchHHHHhhccEeeecccccccchhHHH
Q 020487          197 VARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRSRSTENKAL  274 (325)
Q Consensus       197 ~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  274 (325)
                      ...+.+.++++++|++|||+|+ ..+...+++++++|+++.+|.... ....++...++.+++++.++......      
T Consensus       238 ~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  311 (361)
T cd08231         238 RAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPS------  311 (361)
T ss_pred             HHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCch------
Confidence            2467777887889999999986 457888999999999999987643 22345555567789998887653221      


Q ss_pred             HHHHHHHHHHHHHHCC----ccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          275 IVSEVEKNVWPAIAVG----KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       275 ~~~~~~~~~~~~~~~g----~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      .+++    +++++.++    .+.++++++|+++++++|++.+.+++. +|++|.|
T Consensus       312 ~~~~----~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  361 (361)
T cd08231         312 HLYR----AVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP  361 (361)
T ss_pred             hHHH----HHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence            1233    55666555    355677899999999999999988764 7999987

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=2e-41  Score=298.97  Aligned_cols=299  Identities=20%  Similarity=0.259  Sum_probs=245.4

Q ss_pred             CCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEcC
Q 020487           11 SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG   90 (325)
Q Consensus        11 ~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~   90 (325)
                      .++.+++++.+.|+|+++||+|||.++|+|+.+..   |.++.. ..|.++|.|++|+|+++|+   .|++||+|+++  
T Consensus        15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~-~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~--   85 (325)
T TIGR02825        15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLK-EGDTMMGQQVARVVESKNV---ALPKGTIVLAS--   85 (325)
T ss_pred             CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCC-CCCcEecceEEEEEEeCCC---CCCCCCEEEEe--
Confidence            45779999999999999999999999999997654   333222 2367999999999999874   59999999987  


Q ss_pred             CceeeeEEeecCCceeeC----CCCCCHHhh-ccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC
Q 020487           91 GGGYAEKVAVPAGQVLPV----PSGVSLKDA-AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV  165 (325)
Q Consensus        91 ~g~~~~~~~~~~~~~~~~----p~~~~~~~a-a~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~  165 (325)
                       ++|++|++++.+.+.++    |++++++++ ++++.++.|||+++.+..++++|++|||+|++|++|++++|+|+..|+
T Consensus        86 -~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~  164 (325)
T TIGR02825        86 -PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC  164 (325)
T ss_pred             -cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC
Confidence             46999999999888777    899999987 689999999999988889999999999999999999999999999999


Q ss_pred             EEEEEecChhhHHHHHHcCCCEEEeCCCc-hHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCc-
Q 020487          166 RVFVTAGSEEKLAVCKDLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA-  243 (325)
Q Consensus       166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-  243 (325)
                      +|+++++++++.+.++++|+++++++... .+.+.+.... ++++|++|||+|+..+..++++++++|+++.+|..... 
T Consensus       165 ~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~-~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~  243 (325)
T TIGR02825       165 KVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKAS-PDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYN  243 (325)
T ss_pred             EEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhC-CCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhcc
Confidence            99999999999999999999999988764 4444455544 45899999999998889999999999999999865421 


Q ss_pred             ---ccc--cchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCc
Q 020487          244 ---KTE--LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHI  318 (325)
Q Consensus       244 ---~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~  318 (325)
                         ...  .....+..+++++.++......    .....+.++.+++++.+|++++.+...|+++++++|++.+++++..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~  319 (325)
T TIGR02825       244 RTGPLPPGPPPEIVIYQELRMEGFIVNRWQ----GEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENL  319 (325)
T ss_pred             cCCCCCCCcchHHHhhhcceEeEEEehhhh----hhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcCCCC
Confidence               111  1233455577777776543221    1223445666899999999988777889999999999999999999


Q ss_pred             eeEEEe
Q 020487          319 GKIMLV  324 (325)
Q Consensus       319 gkvvi~  324 (325)
                      ||+|+.
T Consensus       320 gkvVv~  325 (325)
T TIGR02825       320 GKTIVK  325 (325)
T ss_pred             CeEEeC
Confidence            999874

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=2e-41  Score=301.51  Aligned_cols=306  Identities=21%  Similarity=0.247  Sum_probs=242.9

Q ss_pred             CcceEEEeecCCCCC-CCeEEEEEeeeecChhhhhhhhCCC--CCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEE
Q 020487           12 PEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSY--PPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL   88 (325)
Q Consensus        12 ~~~l~~~~~~~~~~~-~~ev~v~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~   88 (325)
                      ++.+++++.+.|+|. ++||+|||.++|||+.|+.......  .....+|.++|||++|+|+++|++++.|++||+|+++
T Consensus        20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~   99 (345)
T cd08293          20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF   99 (345)
T ss_pred             ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence            477999999999874 9999999999999999964332111  1112347789999999999999999999999999886


Q ss_pred             cCCceeeeEEeecCCceeeCCCCCCHH----hhccCcchHHHHHHHHHhhcCCCCC--CEEEEEcCCchHHHHHHHHHHH
Q 020487           89 LGGGGYAEKVAVPAGQVLPVPSGVSLK----DAAAFPEVACTVWSTVFMTSHLSPG--ESFLVHGGSSGIGTFAIQMGKC  162 (325)
Q Consensus        89 ~~~g~~~~~~~~~~~~~~~~p~~~~~~----~aa~l~~~~~~a~~~l~~~~~~~~~--~~vli~g~~g~~G~~~~~~a~~  162 (325)
                      .  ++|++|++++++.++++|+++++.    .+++++.++.+||+++.+..+++++  ++|||+|++|++|++++|+|+.
T Consensus       100 ~--~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~  177 (345)
T cd08293         100 N--WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRL  177 (345)
T ss_pred             C--CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence            3  689999999999999999985432    2456788899999999778888877  9999999999999999999999


Q ss_pred             CCC-EEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEecc
Q 020487          163 QGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       163 ~g~-~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      +|+ +|+++++++++.+.+++ +|+++++++...++.+.+++.++ +++|++|||+|+..+..++++++++|+++.+|..
T Consensus       178 ~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~-~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~  256 (345)
T cd08293         178 LGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCP-EGVDVYFDNVGGEISDTVISQMNENSHIILCGQI  256 (345)
T ss_pred             cCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCC-CCceEEEECCCcHHHHHHHHHhccCCEEEEEeee
Confidence            999 89999999999988876 99999999888788888888776 6899999999998888899999999999999853


Q ss_pred             CCcc--c----ccc--hHHH-HhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHH
Q 020487          241 GGAK--T----ELN--ITSL-FAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL  311 (325)
Q Consensus       241 ~~~~--~----~~~--~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~  311 (325)
                      ....  .    ...  ...+ ..++++........     ......+.++++.+++.+|.+++.+...++++++++|++.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~  331 (345)
T cd08293         257 SQYNKDVPYPPPLPEATEAILKERNITRERFLVLN-----YKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQS  331 (345)
T ss_pred             ecccCccCccccccchhHHHhhhcceEEEEEEeec-----cHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHHHHHHH
Confidence            3210  0    111  1111 12334433332211     1122345566688999999998776667799999999999


Q ss_pred             HHhCCCceeEEEeC
Q 020487          312 MESSQHIGKIMLVP  325 (325)
Q Consensus       312 ~~~~~~~gkvvi~~  325 (325)
                      +.+++..||+|+++
T Consensus       332 ~~~~~~~gkvvl~~  345 (345)
T cd08293         332 MMNGGNIGKQIVKV  345 (345)
T ss_pred             HhcCCCCCeEEEEC
Confidence            99998889999864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=6.9e-42  Score=298.98  Aligned_cols=291  Identities=19%  Similarity=0.251  Sum_probs=230.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecC-hhhhhhhhCCCCCC--CCCCCCCCCceeEEEEEecCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALN-RADTLQRKGSYPPP--KGASPYPGLECSGTILSVGKNVS   77 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~-~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~vG~~~~   77 (325)
                      ||++++..++   .+++++.+.|+|+++||+|||.++||| ++|++.+.|..+..  ..+|.++|||++|+|+++|+++ 
T Consensus         2 ~ka~~~~~~~---~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-   77 (308)
T TIGR01202         2 TQAIVLSGPN---QIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-   77 (308)
T ss_pred             ceEEEEeCCC---eEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-
Confidence            7899998654   399999999999999999999999996 69999888876532  2468999999999999999998 


Q ss_pred             CCCCCCEEEEEc---------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcC
Q 020487           78 RWKVGDQVCALL---------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGG  148 (325)
Q Consensus        78 ~~~~Gd~V~~~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~  148 (325)
                      .|++||+|+..+         ..|+|+||++++++.++++|++++++. +.+ .+..+||+++.. . ..++++++|+|+
T Consensus        78 ~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~~~~~a~~~~~~-~-~~~~~~vlV~G~  153 (308)
T TIGR01202        78 GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALL-ALAATARHAVAG-A-EVKVLPDLIVGH  153 (308)
T ss_pred             CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhh-hHHHHHHHHHHh-c-ccCCCcEEEECC
Confidence            599999998632         159999999999999999999999865 444 457899999854 3 346889999986


Q ss_pred             CchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH-HHHHhhc
Q 020487          149 SSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLG  226 (325)
Q Consensus       149 ~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~  226 (325)
                       |++|++++|+|+.+|++ |+++..++++++.+...   .+++....          .+.++|++|||+|.. .+..+++
T Consensus       154 -G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~----------~~~g~Dvvid~~G~~~~~~~~~~  219 (308)
T TIGR01202       154 -GTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEKD----------PRRDYRAIYDASGDPSLIDTLVR  219 (308)
T ss_pred             -CHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhhc----------cCCCCCEEEECCCCHHHHHHHHH
Confidence             99999999999999997 44555565565554432   34433211          234799999999986 4688899


Q ss_pred             cccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhh
Q 020487          227 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCE  304 (325)
Q Consensus       227 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~  304 (325)
                      .++++|+++.+|.... ...++...++.+++++.++....          .+.++.+++++.+|++++  +++++|+|+|
T Consensus       220 ~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~~~~~~~----------~~~~~~~~~l~~~g~i~~~~~it~~~~l~~  288 (308)
T TIGR01202       220 RLAKGGEIVLAGFYTE-PVNFDFVPAFMKEARLRIAAEWQ----------PGDLHAVRELIESGALSLDGLITHQRPASD  288 (308)
T ss_pred             hhhcCcEEEEEeecCC-CcccccchhhhcceEEEEecccc----------hhHHHHHHHHHHcCCCChhhccceeecHHH
Confidence            9999999999997643 33455566777888888754321          123455899999999875  6799999999


Q ss_pred             HHHHHHHHHhCCCceeEEEe
Q 020487          305 AAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       305 ~~~a~~~~~~~~~~gkvvi~  324 (325)
                      +++|++.+.++...+|++++
T Consensus       289 ~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       289 AAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             HHHHHHHHhcCcCceEEEeC
Confidence            99999998877777899874

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=6.5e-41  Score=296.63  Aligned_cols=304  Identities=30%  Similarity=0.461  Sum_probs=259.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..+++.  +++++.+.|++.++||+||+.++++|++|+..+.|..+.. .+|.++|||++|+|+++|++++.++
T Consensus         1 m~a~~~~~~~~~--~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~p~~~g~e~~G~v~~vG~~v~~~~   77 (333)
T cd08296           1 YKAVQVTEPGGP--LELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGL-SYPRVPGHEVVGRIDAVGEGVSRWK   77 (333)
T ss_pred             CeEEEEccCCCC--ceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCC-CCCcccCcceeEEEEEECCCCccCC
Confidence            999999987543  8899999999999999999999999999999998876432 3477899999999999999999999


Q ss_pred             CCCEEEE----------------------------EcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487           81 VGDQVCA----------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (325)
Q Consensus        81 ~Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~  132 (325)
                      +||+|+.                            +..+|++++|+.++...++++|+++++.+++.++.++.++|.++.
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~  157 (333)
T cd08296          78 VGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALR  157 (333)
T ss_pred             CCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHH
Confidence            9999976                            222588999999999999999999999999999999999999985


Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      . .+++++++++|+| +|.+|++++++|+.+|++|+++++++++.+.++++|++++++....++...+.+.   +++|++
T Consensus       158 ~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~---~~~d~v  232 (333)
T cd08296         158 N-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQEL---GGAKLI  232 (333)
T ss_pred             h-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhc---CCCCEE
Confidence            4 4899999999999 5999999999999999999999999999999999999999888776666666554   369999


Q ss_pred             EeCCC-hHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCc
Q 020487          213 LDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       213 i~~~g-~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                      +|+.| ...+...+++++++|+++.+|... ...+++...++.+++++.+......          ..++.+++++.++.
T Consensus       233 i~~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~~~~~  301 (333)
T cd08296         233 LATAPNAKAISALVGGLAPRGKLLILGAAG-EPVAVSPLQLIMGRKSIHGWPSGTA----------LDSEDTLKFSALHG  301 (333)
T ss_pred             EECCCchHHHHHHHHHcccCCEEEEEecCC-CCCCcCHHHHhhcccEEEEeCcCCH----------HHHHHHHHHHHhCC
Confidence            99986 566788899999999999998765 3344566667789999998763211          12333677788888


Q ss_pred             cccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          292 VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       292 l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      +++.+ ..|+++++.+|++.+.+++..||+|+.
T Consensus       302 l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         302 VRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             CCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            88775 689999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=4.6e-41  Score=297.05  Aligned_cols=310  Identities=33%  Similarity=0.475  Sum_probs=249.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCC-CCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-YPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~-~~G~e~~G~V~~vG~~~~~~   79 (325)
                      |++++...++..  .++++.+.|.+.++||+|||.++|||+||++.+.+..+.... +. ++|||++|+|+++| .++.+
T Consensus         1 m~a~~~~~~~~~--~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~-~~~i~GHE~~G~V~evG-~~~~~   76 (350)
T COG1063           1 MKAAVVYVGGGD--VRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPP-GDIILGHEFVGEVVEVG-VVRGF   76 (350)
T ss_pred             CceeEEEecCCc--cccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCC-CCcccCccceEEEEEec-cccCC
Confidence            788888876653  336667666689999999999999999999999997665432 33 89999999999999 77889


Q ss_pred             CCCCEEEEE------------------c--------------CCceeeeEEeecCCceee-CCCCCCHHhhccCcchHHH
Q 020487           80 KVGDQVCAL------------------L--------------GGGGYAEKVAVPAGQVLP-VPSGVSLKDAAAFPEVACT  126 (325)
Q Consensus        80 ~~Gd~V~~~------------------~--------------~~g~~~~~~~~~~~~~~~-~p~~~~~~~aa~l~~~~~~  126 (325)
                      ++||||+.-                  |              .+|+|+||+.++.++.+. +|+++ +.+.+++..++.+
T Consensus        77 ~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~  155 (350)
T COG1063          77 KVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLAT  155 (350)
T ss_pred             CCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhh
Confidence            999999742                  1              148999999999765555 58887 5666678999999


Q ss_pred             HHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHh
Q 020487          127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEET  204 (325)
Q Consensus       127 a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~  204 (325)
                      ++++........++++++|+|+ |++|++++++++..|+ +|++++.+++|++.+++ .+++.+.+.........+.+.+
T Consensus       156 ~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t  234 (350)
T COG1063         156 AYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELT  234 (350)
T ss_pred             hhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHh
Confidence            9887555666666779999998 9999999999999998 88888999999999998 6666666655556677788888


Q ss_pred             CCCcccEEEeCCChHH-HHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHH
Q 020487          205 GGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV  283 (325)
Q Consensus       205 ~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  283 (325)
                      ++.++|++|||+|... +..+++.++++|+++.+|.+......++...++.+++++.|+......         ..++.+
T Consensus       235 ~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~---------~~~~~~  305 (350)
T COG1063         235 GGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGR---------EDFERA  305 (350)
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCc---------ccHHHH
Confidence            8889999999999754 688899999999999999887543356677888999999998432111         122338


Q ss_pred             HHHHHCCcccc--ccccccchhhHHHHHHHHHhCCC-ceeEEEeC
Q 020487          284 WPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQH-IGKIMLVP  325 (325)
Q Consensus       284 ~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~-~gkvvi~~  325 (325)
                      ++++.+|++++  ++++.++++++++|++.+.+.+. .-|+++.|
T Consensus       306 ~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         306 LDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             HHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            89999999765  56899999999999999987554 55998875

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=2e-40  Score=292.95  Aligned_cols=322  Identities=33%  Similarity=0.469  Sum_probs=269.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      ||++.+..+|.+..+++++.+.|.|+++||+||+.++|+|++|++...+.++.. .+|.++|+|++|+|+.+|+++..++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~-~~~~~~g~e~~G~v~~vG~~v~~~~   80 (327)
T PRK10754          2 AKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPP-SLPSGLGTEAAGVVSKVGSGVKHIK   80 (327)
T ss_pred             ceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCC-CCCCccCcceEEEEEEeCCCCCCCC
Confidence            899999998888889999999999999999999999999999999988876532 2477899999999999999999999


Q ss_pred             CCCEEEEEc-CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHH
Q 020487           81 VGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM  159 (325)
Q Consensus        81 ~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~  159 (325)
                      +||+|+.+. .+|+|++|+.++.+.++++|+++++++++.++....++|.++.....+++|++++|+|++|.+|++++++
T Consensus        81 ~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~l  160 (327)
T PRK10754         81 VGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQW  160 (327)
T ss_pred             CCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHH
Confidence            999998653 4589999999999999999999999999999999999999987778899999999999889999999999


Q ss_pred             HHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEec
Q 020487          160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       160 a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ++.+|++|+.++.++++.+.++++|++++++.....+.+.+++.++++++|++++|+++..+...+++++++|+++.+|.
T Consensus       161 ak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~  240 (327)
T PRK10754        161 AKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGN  240 (327)
T ss_pred             HHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhccCCEEEEEcc
Confidence            99999999999999999999999999888888777788888888888899999999999888889999999999999987


Q ss_pred             cCCcccccchHHHHhhccEe-eecccccccchhHHHHHHHHHHHHHHHHHCCccccc--cccccchhhHHHHHHHHHhCC
Q 020487          240 QGGAKTELNITSLFAKRLTV-QAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV--IYKYLPLCEAAEAHQLMESSQ  316 (325)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~l~~~~~a~~~~~~~~  316 (325)
                      ........+...+..++... .........  ..+....+.++.+++++.+|.+++.  ..+.|++++++++++.+.+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~  318 (327)
T PRK10754        241 ASGPVTGVNLGILNQKGSLYVTRPSLQGYI--TTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRA  318 (327)
T ss_pred             CCCCCCCcCHHHHhccCceEEecceeeccc--CCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCC
Confidence            65322223333333222211 111111111  1122344455668899999998753  478999999999999999999


Q ss_pred             CceeEEEeC
Q 020487          317 HIGKIMLVP  325 (325)
Q Consensus       317 ~~gkvvi~~  325 (325)
                      ..+|+|++|
T Consensus       319 ~~~~~~~~~  327 (327)
T PRK10754        319 TQGSSLLIP  327 (327)
T ss_pred             CcceEEEeC
Confidence            999999987

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=2.1e-41  Score=300.08  Aligned_cols=293  Identities=18%  Similarity=0.225  Sum_probs=231.0

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCC---CCCCCCCCCceeEEEEEecCCCCC
Q 020487            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP---KGASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~---~~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      |++++..+++   +++++.+.|+ +++||+|||.++|||++|++.+.|.++..   ..+|.++|||++|+|+++|..  .
T Consensus         4 ~~~~~~~~~~---~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~   77 (341)
T cd08237           4 QVYRLVRPKF---FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T   77 (341)
T ss_pred             cceEEeccce---EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence            5788876654   9999999985 99999999999999999999999875321   246899999999999998864  6


Q ss_pred             CCCCCEEEEEc------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh-
Q 020487           79 WKVGDQVCALL------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM-  133 (325)
Q Consensus        79 ~~~Gd~V~~~~------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~-  133 (325)
                      |++||+|+...                        .+|+|+||++++++.++++|+++++++|+ +..+++++++++.. 
T Consensus        78 ~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~~~~a~~a~~~~  156 (341)
T cd08237          78 YKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTELVSVGVHAISRF  156 (341)
T ss_pred             cCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhh-hhchHHHHHHHHHHH
Confidence            99999997531                        25889999999999999999999998876 55688888888753 


Q ss_pred             -hcCCCCCCEEEEEcCCchHHHHHHHHHHH-CC-CEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487          134 -TSHLSPGESFLVHGGSSGIGTFAIQMGKC-QG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       134 -~~~~~~~~~vli~g~~g~~G~~~~~~a~~-~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                       ...+++|++|+|+|+ |++|++++|++++ .| .+|+++++++++++.+++.++...++    .    .   ....++|
T Consensus       157 ~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~----~----~---~~~~g~d  224 (341)
T cd08237         157 EQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID----D----I---PEDLAVD  224 (341)
T ss_pred             hhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh----h----h---hhccCCc
Confidence             345688999999997 9999999999986 55 58999999999999888766543321    1    1   1122699


Q ss_pred             EEEeCCCh----HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHH
Q 020487          211 VILDCMGA----SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPA  286 (325)
Q Consensus       211 ~vi~~~g~----~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (325)
                      ++|||+|+    ..+..+++.++++|+++.+|.... ...++...++.+++++.++.....          +.++.++++
T Consensus       225 ~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~g~~~~~~----------~~~~~~~~~  293 (341)
T cd08237         225 HAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY-PVPINTRMVLEKGLTLVGSSRSTR----------EDFERAVEL  293 (341)
T ss_pred             EEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC-CcccCHHHHhhCceEEEEecccCH----------HHHHHHHHH
Confidence            99999994    346888999999999999996543 345666777889999998754221          123448888


Q ss_pred             HHCC-----ccccccccccch---hhHHHHHHHHHhCCCceeEEEeC
Q 020487          287 IAVG-----KVKPVIYKYLPL---CEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       287 ~~~g-----~l~~~~~~~~~l---~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +.+|     .+++++++.|++   ++++++++.+.++ ..||+|+.+
T Consensus       294 ~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~  339 (341)
T cd08237         294 LSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW  339 (341)
T ss_pred             HHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence            9888     577788999998   5667777666554 678999874

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.5e-40  Score=296.47  Aligned_cols=311  Identities=32%  Similarity=0.493  Sum_probs=260.8

Q ss_pred             CEEEEEcCCCCCcceEEEe-ecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC-------------------CCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQE-VEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-------------------PKGASPY   60 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~-~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~-------------------~~~~p~~   60 (325)
                      ||++++...+.++.+.+.+ .+.|++.+++|+||+.++++|++|++.+.|.++.                   ...+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            8999998777665576654 4777789999999999999999999988776531                   2345788


Q ss_pred             CCCceeEEEEEecCCCCCCCCCCEEEEEc-------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCc
Q 020487           61 PGLECSGTILSVGKNVSRWKVGDQVCALL-------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP  121 (325)
Q Consensus        61 ~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~-------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~  121 (325)
                      +|||++|+|+++|+++++|++||+|+..+                   .+|+|++|+.++.+.++++|+++++.+++++.
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~  160 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFP  160 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcc
Confidence            99999999999999999999999998742                   24899999999999999999999999999999


Q ss_pred             chHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHH
Q 020487          122 EVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK  201 (325)
Q Consensus       122 ~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  201 (325)
                      ..+.++|+++ ....++++++++|+|++|.+|++++++++.+|+++++++.++ +++.++++|++.+.+........  .
T Consensus       161 ~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~--~  236 (350)
T cd08274         161 CSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRALGADTVILRDAPLLAD--A  236 (350)
T ss_pred             cHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHhcCCeEEEeCCCccHHH--H
Confidence            9999999988 778899999999999999999999999999999999988665 77888889987666554444333  4


Q ss_pred             HHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHH
Q 020487          202 EETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEK  281 (325)
Q Consensus       202 ~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  281 (325)
                      ..+.++++|++|||+|+..+..++++++++|+++.+|........++...++.+++++.+.....          .+.++
T Consensus       237 ~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~  306 (350)
T cd08274         237 KALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGT----------REVFR  306 (350)
T ss_pred             HhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCC----------HHHHH
Confidence            55667789999999999888999999999999999986543324556666677888888765421          22345


Q ss_pred             HHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          282 NVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       282 ~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      .+++++.++.+.+.+.+.|++++++++++.+..+...+|+|++|
T Consensus       307 ~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         307 RLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             HHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence            58899999999887889999999999999999888889999987

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=1.3e-40  Score=295.80  Aligned_cols=308  Identities=29%  Similarity=0.432  Sum_probs=263.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC--CCCCCCCCCCceeEEEEEecCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      |||+++..++++  +++.+.+.|++.++||+|++.++++|++|+....|.++.  ...+|.++|+|++|+|+++|+++..
T Consensus         1 ~ka~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~   78 (340)
T cd05284           1 MKAARLYEYGKP--LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDG   78 (340)
T ss_pred             CeeeEeccCCCC--ceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCc
Confidence            899999987654  888899999999999999999999999999998887653  3455788999999999999999999


Q ss_pred             CCCCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHH
Q 020487           79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (325)
Q Consensus        79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l  131 (325)
                      |++||+|+++.                           .+|+|++|+.++.++++++|+++++++++.++..+.+||.++
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l  158 (340)
T cd05284          79 LKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAV  158 (340)
T ss_pred             CcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence            99999998763                           258999999999999999999999999999999999999998


Q ss_pred             Hhh-cCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcc
Q 020487          132 FMT-SHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV  209 (325)
Q Consensus       132 ~~~-~~~~~~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  209 (325)
                      ... ..+.++++++|+|+ +.+|++++++|+..| ++|+++++++++.+.++++|++++++++.. +.+.+.+.+++.++
T Consensus       159 ~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~i~~~~~~~~~  236 (340)
T cd05284         159 KKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDD-VVEEVRELTGGRGA  236 (340)
T ss_pred             HHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-HHHHHHHHhCCCCC
Confidence            665 46888999999996 669999999999999 799999999999999999999999888776 77788888877789


Q ss_pred             cEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHH
Q 020487          210 DVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA  288 (325)
Q Consensus       210 d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (325)
                      |+++||+|+ ..+..++++++++|+++.+|....  ..++....+.+++++.+.....          ...++.+++++.
T Consensus       237 dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~  304 (340)
T cd05284         237 DAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH--GRLPTSDLVPTEISVIGSLWGT----------RAELVEVVALAE  304 (340)
T ss_pred             CEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC--CccCHHHhhhcceEEEEEeccc----------HHHHHHHHHHHH
Confidence            999999996 567888999999999999986543  2344444456888888764321          123445788899


Q ss_pred             CCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          289 VGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       289 ~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +|.+.+ ....|+++++++|++.+.+++..||+++.|
T Consensus       305 ~g~l~~-~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         305 SGKVKV-EITKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             hCCCCc-ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence            998875 446799999999999999999899999876

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=2.3e-40  Score=292.03  Aligned_cols=319  Identities=29%  Similarity=0.403  Sum_probs=273.6

Q ss_pred             EcCCCCCc--ceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCC
Q 020487            6 ITQPGSPE--VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD   83 (325)
Q Consensus         6 ~~~~~~~~--~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   83 (325)
                      ++..+.+.  .+++++.+.|++.++||+|++.++++|+.|...+.+..+....+|.++|+|++|+|+++|++++.+++||
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd   82 (323)
T cd05282           3 YTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQ   82 (323)
T ss_pred             eCcCCCCccceEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCC
Confidence            35555554  6888899999999999999999999999999998887654444577899999999999999999999999


Q ss_pred             EEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHC
Q 020487           84 QVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ  163 (325)
Q Consensus        84 ~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~  163 (325)
                      +|+++...|+|++|+.++.+.++++|+++++.+++.++....++|.++.....+.++++++|+|++|.+|++++++|+.+
T Consensus        83 ~V~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~  162 (323)
T cd05282          83 RVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLL  162 (323)
T ss_pred             EEEEeCCCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHC
Confidence            99998746899999999999999999999999999999999999999888888899999999999999999999999999


Q ss_pred             CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCc
Q 020487          164 GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA  243 (325)
Q Consensus       164 g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~  243 (325)
                      |++++++++++++.+.++++|++.+++.....+...+.+.++++++|++++|+|+......+++++++|+++.+|.....
T Consensus       163 g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~  242 (323)
T cd05282         163 GFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGE  242 (323)
T ss_pred             CCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCC
Confidence            99999999999999999999999999887777778888888888999999999998888889999999999999876543


Q ss_pred             ccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487          244 KTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML  323 (325)
Q Consensus       244 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  323 (325)
                      ...++...+..+++++.+..+........+....+.++.+++++.++.+.+.+.+.|+++++++|++.+.+++..+|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  322 (323)
T cd05282         243 PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLL  322 (323)
T ss_pred             CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCceEee
Confidence            33455555555889888877654322112334566777789999999988777899999999999999998888889887


Q ss_pred             e
Q 020487          324 V  324 (325)
Q Consensus       324 ~  324 (325)
                      +
T Consensus       323 ~  323 (323)
T cd05282         323 T  323 (323)
T ss_pred             C
Confidence            4

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=6.7e-40  Score=288.53  Aligned_cols=323  Identities=59%  Similarity=0.969  Sum_probs=277.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      ||++++...+.+..+++++.+.|.+.++||+|++.++++|++|+....+.++.....|.++|||++|+|+++|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK   80 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence            89999998777777888888888889999999999999999999988887655445678999999999999999999999


Q ss_pred             CCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG  160 (325)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a  160 (325)
                      +||+|+++..+|+|++|+.++.+.++++|+++++.+++.++.++.+++.++.+...+.++++++|+|+++.+|+++++++
T Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~  160 (323)
T cd05276          81 VGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLA  160 (323)
T ss_pred             CCCEEEEecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHH
Confidence            99999999777999999999999999999999999999999999999999877788999999999999999999999999


Q ss_pred             HHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEecc
Q 020487          161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      +..|++|+++++++++.+.++++|.+.+++.....+...+.+...++++|++++|.|+..+...++++.++|+++.+|..
T Consensus       161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~  240 (323)
T cd05276         161 KALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLL  240 (323)
T ss_pred             HHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhccCCEEEEEecC
Confidence            99999999999998888888889988888877767777777777667899999999988888889999999999999875


Q ss_pred             CCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCcee
Q 020487          241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGK  320 (325)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gk  320 (325)
                      .......+...++.+++++.++.................++.+.+++.++.+.+..+..|++++++++++.+.++...+|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k  320 (323)
T cd05276         241 GGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGK  320 (323)
T ss_pred             CCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcce
Confidence            54333445555667888888876654322222334556667788899999988778899999999999999998888888


Q ss_pred             EEE
Q 020487          321 IML  323 (325)
Q Consensus       321 vvi  323 (325)
                      +++
T Consensus       321 vv~  323 (323)
T cd05276         321 IVL  323 (323)
T ss_pred             EeC
Confidence            764

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=3.4e-40  Score=292.65  Aligned_cols=316  Identities=26%  Similarity=0.381  Sum_probs=258.7

Q ss_pred             EEEEEcCC---CCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCC
Q 020487            2 KAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         2 ~a~~~~~~---~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      ||+++..+   +.++.+++.+.|.|+|+++||+||+.++++|++|...+.+..+.. .+|.++|+|++|+|+++|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~V~~vG~~v~~   79 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEA-GQPKILGWDAAGVVVAVGDEVTL   79 (336)
T ss_pred             CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCC-CCCcccceeeEEEEEEeCCCCCC
Confidence            57788876   677889999999999999999999999999999999888765432 35778999999999999999999


Q ss_pred             CCCCCEEEEEc---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCC-----CCEEEEEcCCc
Q 020487           79 WKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP-----GESFLVHGGSS  150 (325)
Q Consensus        79 ~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~-----~~~vli~g~~g  150 (325)
                      |++||+|+++.   ..|+|++|++++++.++++|+++++++++.++...++||+++....++++     |++++|+|++|
T Consensus        80 ~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g  159 (336)
T TIGR02817        80 FKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAG  159 (336)
T ss_pred             CCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCc
Confidence            99999999875   35899999999999999999999999999999999999999978888877     99999999999


Q ss_pred             hHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC-hHHHHHhhccc
Q 020487          151 GIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSL  228 (325)
Q Consensus       151 ~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g-~~~~~~~~~~l  228 (325)
                      .+|.+++|+|+.+ |++|++++.++++.+.++++|+++++++.. .+...+.+ .+++++|++++|++ .......++++
T Consensus       160 ~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~-~~~~~vd~vl~~~~~~~~~~~~~~~l  237 (336)
T TIGR02817       160 GVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEK-LGLEAVSYVFSLTHTDQHFKEIVELL  237 (336)
T ss_pred             HHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHh
Confidence            9999999999998 999999999999999999999999987554 55666666 45568999999975 46678889999


Q ss_pred             cCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHH--HHHHHHHHHHHHHCCcccccccccc---chh
Q 020487          229 NIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALI--VSEVEKNVWPAIAVGKVKPVIYKYL---PLC  303 (325)
Q Consensus       229 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~~~~---~l~  303 (325)
                      +++|+++.++..    ...+...+..+++++.+..+........+..  ....++++.+++.++.+++.+...+   +++
T Consensus       238 ~~~G~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~  313 (336)
T TIGR02817       238 APQGRFALIDDP----AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAA  313 (336)
T ss_pred             ccCCEEEEEccc----ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHH
Confidence            999999988532    2344444555667666543321111111111  1245677889999999887665555   479


Q ss_pred             hHHHHHHHHHhCCCceeEEEe
Q 020487          304 EAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       304 ~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      ++++|++.+.+++..||++++
T Consensus       314 ~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       314 NLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             HHHHHHHHHHcCCccceEEEe
Confidence            999999999999888998874

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=7.5e-40  Score=289.06  Aligned_cols=316  Identities=22%  Similarity=0.322  Sum_probs=259.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||++++.+++++.+++++.+.|.+.++||+|++.++++|++|+..+.|..+....+|.++|||++|+|+++  +++.++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~   78 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR   78 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence            899999998876779999999999999999999999999999999998876544445778999999999998  456799


Q ss_pred             CCCEEEEEc------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhc--CCC-CCCEEEEEcCCch
Q 020487           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS--HLS-PGESFLVHGGSSG  151 (325)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~--~~~-~~~~vli~g~~g~  151 (325)
                      +||+|++..      .+|+|++|+.++++.++++|+++++.+++.+++.+.++|.++....  ++. .+++++|+|++|.
T Consensus        79 ~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~  158 (325)
T cd05280          79 EGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGG  158 (325)
T ss_pred             CCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccH
Confidence            999999864      3689999999999999999999999999999999999999885543  335 3579999999999


Q ss_pred             HHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCC
Q 020487          152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID  231 (325)
Q Consensus       152 ~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~  231 (325)
                      +|++++++|+.+|++|+++++++++++.++++|++++++....  .....+....+++|+++||.++..+...+++++++
T Consensus       159 vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~  236 (325)
T cd05280         159 VGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDL--LDESKKPLLKARWAGAIDTVGGDVLANLLKQTKYG  236 (325)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhH--HHHHHHHhcCCCccEEEECCchHHHHHHHHhhcCC
Confidence            9999999999999999999999999999999999888875542  22334444555799999999998889999999999


Q ss_pred             CEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHH
Q 020487          232 GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL  311 (325)
Q Consensus       232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~  311 (325)
                      |+++.+|.........+...++.+++++.+........    ....+.++.+.+++..+ +...+..+|++++++++++.
T Consensus       237 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~  311 (325)
T cd05280         237 GVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPM----ELRKQVWQKLATEWKPD-LLEIVVREISLEELPEAIDR  311 (325)
T ss_pred             CEEEEEecCCCCccccccchheeeeeEEEEEEeecCch----hHHHHHHHHHHHHHhcC-CccceeeEecHHHHHHHHHH
Confidence            99999987654333444455556888888876543221    12234445566666666 44457899999999999999


Q ss_pred             HHhCCCceeEEEeC
Q 020487          312 MESSQHIGKIMLVP  325 (325)
Q Consensus       312 ~~~~~~~gkvvi~~  325 (325)
                      +.+++..||+|++.
T Consensus       312 ~~~~~~~gk~vv~~  325 (325)
T cd05280         312 LLAGKHRGRTVVKI  325 (325)
T ss_pred             HhcCCcceEEEEeC
Confidence            99999999999863

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=6.8e-40  Score=296.39  Aligned_cols=313  Identities=27%  Similarity=0.469  Sum_probs=260.4

Q ss_pred             CEEEEEc--CCCCCc-ceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC---------CCCCCCCCCCceeEE
Q 020487            1 MKAIVIT--QPGSPE-VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP---------PKGASPYPGLECSGT   68 (325)
Q Consensus         1 m~a~~~~--~~~~~~-~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~---------~~~~p~~~G~e~~G~   68 (325)
                      |||+++.  ..+++. .+++++.+.|.++++||+|++.++++|++|++...+....         ....+.++|||++|+
T Consensus        13 ~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~   92 (393)
T cd08246          13 MYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGI   92 (393)
T ss_pred             hhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEE
Confidence            7888775  344443 5899999999999999999999999999999887665110         011134789999999


Q ss_pred             EEEecCCCCCCCCCCEEEEEcC----------------------------CceeeeEEeecCCceeeCCCCCCHHhhccC
Q 020487           69 ILSVGKNVSRWKVGDQVCALLG----------------------------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAF  120 (325)
Q Consensus        69 V~~vG~~~~~~~~Gd~V~~~~~----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l  120 (325)
                      |+++|++++.+++||+|+.++.                            +|+|++|+.++...++++|+++++++++.+
T Consensus        93 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l  172 (393)
T cd08246          93 VWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAY  172 (393)
T ss_pred             EEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhhh
Confidence            9999999999999999988742                            489999999999999999999999999999


Q ss_pred             cchHHHHHHHHHhh--cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCc----
Q 020487          121 PEVACTVWSTVFMT--SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE----  194 (325)
Q Consensus       121 ~~~~~~a~~~l~~~--~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----  194 (325)
                      +.++.+||+++...  ++++++++++|+|++|.+|++++++|+.+|+++++++.++++.+.++++|++.+++.+..    
T Consensus       173 ~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~  252 (393)
T cd08246         173 MLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRDFDHWG  252 (393)
T ss_pred             cccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEccccccccc
Confidence            99999999998654  678999999999999999999999999999999999999999999999999988875332    


Q ss_pred             ------------------hHHHHHHHHhCCC-cccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhh
Q 020487          195 ------------------DFVARVKEETGGK-GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK  255 (325)
Q Consensus       195 ------------------~~~~~~~~~~~~~-~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~  255 (325)
                                        .+.+.+.+.+++. ++|++|||+|...+..++++++++|+++.+|........++...++.+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~~~  332 (393)
T cd08246         253 VLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLWMR  332 (393)
T ss_pred             ccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCCCcHHHHhhh
Confidence                              2456677788877 899999999988788899999999999999865543334556666677


Q ss_pred             ccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhC-CCceeEEE
Q 020487          256 RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESS-QHIGKIML  323 (325)
Q Consensus       256 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~-~~~gkvvi  323 (325)
                      +.++.+......          +.++.+++++.++.+.+.++++|+++++++|++.+.++ +..||+++
T Consensus       333 ~~~i~g~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv  391 (393)
T cd08246         333 QKRIQGSHFAND----------REAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAV  391 (393)
T ss_pred             eeEEEecccCcH----------HHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEE
Confidence            888877654321          12344788899999887778999999999999999988 78889876

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=1.4e-39  Score=293.24  Aligned_cols=309  Identities=29%  Similarity=0.447  Sum_probs=259.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCC-CCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~-~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      |||+++..++   .+++++.+.|.|. ++||+||+.++++|++|+..+.|.++.. .+|.++|||++|+|+++|++++++
T Consensus         1 m~a~~~~~~~---~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~~~   76 (386)
T cd08283           1 MKALVWHGKG---DVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGM-KKGDILGHEFMGVVEEVGPEVRNL   76 (386)
T ss_pred             CeeEEEecCC---CceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCC-CCCccccccceEEEEEeCCCCCCC
Confidence            9999998653   4889999999884 9999999999999999999999987653 357889999999999999999999


Q ss_pred             CCCCEEEEEc-----------------------------------------------CCceeeeEEeecCC--ceeeCCC
Q 020487           80 KVGDQVCALL-----------------------------------------------GGGGYAEKVAVPAG--QVLPVPS  110 (325)
Q Consensus        80 ~~Gd~V~~~~-----------------------------------------------~~g~~~~~~~~~~~--~~~~~p~  110 (325)
                      ++||+|+..+                                               .+|+|++|++++.+  .++++|+
T Consensus        77 ~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~  156 (386)
T cd08283          77 KVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPD  156 (386)
T ss_pred             CCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCC
Confidence            9999998743                                               14889999999987  8999999


Q ss_pred             CCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEE
Q 020487          111 GVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI  189 (325)
Q Consensus       111 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  189 (325)
                      +++++++++++..+++||+++ ...+++++++|+|+|+ |.+|.+++++|+..|+ +|+++++++++.+.+++++...++
T Consensus       157 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi  234 (386)
T cd08283         157 DLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETI  234 (386)
T ss_pred             CCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEE
Confidence            999999999999999999998 7788999999999976 9999999999999998 599999999999999988444677


Q ss_pred             eCCCc-hHHHHHHHHhCCCcccEEEeCCChH----------------------HHHHhhccccCCCEEEEEeccCCcccc
Q 020487          190 NYKTE-DFVARVKEETGGKGVDVILDCMGAS----------------------YFQRNLGSLNIDGRLFIIGTQGGAKTE  246 (325)
Q Consensus       190 ~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~----------------------~~~~~~~~l~~~g~~v~~g~~~~~~~~  246 (325)
                      +.... .+.+.+.+.++++++|++|||+|+.                      .+..++++++++|+++.+|........
T Consensus       235 ~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~  314 (386)
T cd08283         235 NFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNK  314 (386)
T ss_pred             cCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCc
Confidence            66665 4777788888777899999999753                      467788999999999999876543333


Q ss_pred             cchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCC-CceeEEE
Q 020487          247 LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQ-HIGKIML  323 (325)
Q Consensus       247 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi  323 (325)
                      .+....+.+++++.+....          ..+.++.+++++.++++.+  ++.+.|+++++++|++.+.+++ ..+|+++
T Consensus       315 ~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  384 (386)
T cd08283         315 FPIGAAMNKGLTLRMGQTH----------VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVL  384 (386)
T ss_pred             cCHHHHHhCCcEEEeccCC----------chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEe
Confidence            4555567788888886421          1234555888899999876  3568899999999999998876 4689999


Q ss_pred             eC
Q 020487          324 VP  325 (325)
Q Consensus       324 ~~  325 (325)
                      +|
T Consensus       385 ~~  386 (386)
T cd08283         385 KP  386 (386)
T ss_pred             cC
Confidence            86

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.7e-39  Score=287.38  Aligned_cols=312  Identities=30%  Similarity=0.455  Sum_probs=266.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++ +..+++++.+.|.|.++|++||+.++++|++|...+.+..+.....|.++|+|++|+|+++|++++.++
T Consensus         1 m~a~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~   79 (341)
T cd08297           1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLK   79 (341)
T ss_pred             CceEEeeccC-CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCC
Confidence            9999998777 456999999999999999999999999999999998887765444566889999999999999999999


Q ss_pred             CCCEEEEEc----------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487           81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (325)
Q Consensus        81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~  132 (325)
                      +||+|+...                            ..|+|++|+.++.+.++++|+++++.+++.++..+.+||.++.
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~  159 (341)
T cd08297          80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALK  159 (341)
T ss_pred             CCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHH
Confidence            999998742                            2588999999999999999999999999999999999999985


Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      . .+++++++++|+|+++.+|.+++++|+.+|++|++++.++++.+.++++|++.+++.....+.+.+.+.++++++|++
T Consensus       160 ~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vd~v  238 (341)
T cd08297         160 K-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGAHAV  238 (341)
T ss_pred             h-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCCCEE
Confidence            5 588999999999998889999999999999999999999999998889999999888777778888888877889999


Q ss_pred             EeCCC-hHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCc
Q 020487          213 LDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       213 i~~~g-~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                      ++|.+ .......+++++++|+++.+|........++...+..+++++.+.....          .+.++.+++++.++.
T Consensus       239 l~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~  308 (341)
T cd08297         239 VVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGT----------RQDLQEALEFAARGK  308 (341)
T ss_pred             EEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCC----------HHHHHHHHHHHHcCC
Confidence            99665 5667888999999999999986553333455555667888887753321          134455888999999


Q ss_pred             cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          292 VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       292 l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +.+.+ ..|++++++++++.+..+...||+++++
T Consensus       309 l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         309 VKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             Cccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            87654 6799999999999999998899999874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=2e-39  Score=290.36  Aligned_cols=310  Identities=28%  Similarity=0.383  Sum_probs=260.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++.+  +++++.+.|++.++||+||+.++++|++|++...|.++.  .+|.++|+|++|+|+++|+++..++
T Consensus         3 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~~--~~p~v~G~e~~G~V~~vG~~v~~~~   78 (365)
T cd08278           3 TTAAVVREPGGP--FVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLPT--PLPAVLGHEGAGVVEAVGSAVTGLK   78 (365)
T ss_pred             cEEeeeccCCCc--ceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCCC--CCCcccccceeEEEEEeCCCcccCC
Confidence            799999986654  788899999999999999999999999999999887652  3477899999999999999999999


Q ss_pred             CCCEEEEE-------------------------------------------------cCCceeeeEEeecCCceeeCCCC
Q 020487           81 VGDQVCAL-------------------------------------------------LGGGGYAEKVAVPAGQVLPVPSG  111 (325)
Q Consensus        81 ~Gd~V~~~-------------------------------------------------~~~g~~~~~~~~~~~~~~~~p~~  111 (325)
                      +||+|+..                                                 ...|+|++|+.++++.++++|++
T Consensus        79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~  158 (365)
T cd08278          79 PGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD  158 (365)
T ss_pred             CCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence            99999851                                                 11378999999999999999999


Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEe
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN  190 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (325)
                      +++++++.++..+.+|+.++.....++++++++|+|+ |.+|++++++|+..|+ +++++++++++.+.++++|++.+++
T Consensus       159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~  237 (365)
T cd08278         159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVIN  237 (365)
T ss_pred             CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEec
Confidence            9999999999999999999888888999999999976 9999999999999999 5888888999999889999999998


Q ss_pred             CCCchHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCC-cccccchHHHHhhccEeeeccccccc
Q 020487          191 YKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRSRS  268 (325)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~  268 (325)
                      ....++.+.+.+.+ +.++|+++||+|. ..+..++++++++|+++.+|.... ....++...++.+++++.++......
T Consensus       238 ~~~~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (365)
T cd08278         238 PKEEDLVAAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSV  316 (365)
T ss_pred             CCCcCHHHHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcC
Confidence            87777777788777 6689999999985 557888999999999999987532 23456666666788888876543221


Q ss_pred             chhHHHHHHHHHHHHHHHHHCCcccc-ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          269 TENKALIVSEVEKNVWPAIAVGKVKP-VIYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~g~l~~-~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                         .    .+.++.+++++.+|++.. .+...|+++++++|++.+++++.. |++++
T Consensus       317 ---~----~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  365 (365)
T cd08278         317 ---P----QEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR  365 (365)
T ss_pred             ---h----HHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence               1    234455788899998854 345689999999999999887654 88774

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=1.5e-39  Score=287.29  Aligned_cols=317  Identities=21%  Similarity=0.291  Sum_probs=251.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++...++++.+++++.+.|.|+++||+||+.++++|++|.....+.......+|.++|||++|+|+++|  +..|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~   78 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK   78 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence            8999999888877789999999999999999999999999999876653222222347889999999999954  56799


Q ss_pred             CCCEEEEEc------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhh--cC-CCCCCEEEEEcCCch
Q 020487           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT--SH-LSPGESFLVHGGSSG  151 (325)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~--~~-~~~~~~vli~g~~g~  151 (325)
                      +||+|+...      .+|+|++|+.++++.++++|+++++++++.+++.+.+||.++...  .. ..++++++|+|++|.
T Consensus        79 ~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~  158 (326)
T cd08289          79 PGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGG  158 (326)
T ss_pred             CCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCch
Confidence            999999875      369999999999999999999999999999999999999887432  23 334789999999999


Q ss_pred             HHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCC
Q 020487          152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID  231 (325)
Q Consensus       152 ~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~  231 (325)
                      +|.+++++|+.+|++|+++++++++.+.++++|++.+++.... ..+.+.+. .++++|+++||+|+..+...+++++++
T Consensus       159 vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~-~~~~~d~vld~~g~~~~~~~~~~l~~~  236 (326)
T cd08289         159 VGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREEL-QEESIKPL-EKQRWAGAVDPVGGKTLAYLLSTLQYG  236 (326)
T ss_pred             HHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhH-HHHHHHhh-ccCCcCEEEECCcHHHHHHHHHHhhcC
Confidence            9999999999999999999999999999999999888876554 24444554 345799999999998888999999999


Q ss_pred             CEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHH
Q 020487          232 GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL  311 (325)
Q Consensus       232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~  311 (325)
                      |+++.+|.......+.+...++.+++++.+..........    ..+.+..+...+....+...+.++|+++++++|++.
T Consensus       237 G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~  312 (326)
T cd08289         237 GSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMEL----RRRIWRRLATDLKPTQLLNEIKQEITLDELPEALKQ  312 (326)
T ss_pred             CEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchH----HHHHHHHHHhhcCccccccccceEeeHHHHHHHHHH
Confidence            9999999764333333455666788998887532211111    122223333333323333456899999999999999


Q ss_pred             HHhCCCceeEEEeC
Q 020487          312 MESSQHIGKIMLVP  325 (325)
Q Consensus       312 ~~~~~~~gkvvi~~  325 (325)
                      +.+++..||+++++
T Consensus       313 ~~~~~~~gkvvv~~  326 (326)
T cd08289         313 ILQGRVTGRTVVKL  326 (326)
T ss_pred             HhcCcccceEEEeC
Confidence            99999999999864

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.1e-39  Score=290.64  Aligned_cols=310  Identities=31%  Similarity=0.470  Sum_probs=265.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCC--
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR--   78 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~--   78 (325)
                      |||+++..++.+  +++++.+.|.+.++||+|++.++++|++|+....+.++.  .+|.++|||++|+|+.+|+++..  
T Consensus         1 ~~a~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~p~~~g~e~~G~v~~vG~~~~~~~   76 (367)
T cd08263           1 MKAAVLKGPNPP--LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF--PPPFVLGHEISGEVVEVGPNVENPY   76 (367)
T ss_pred             CeeEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC--CCCcccccccceEEEEeCCCCCCCC
Confidence            899999987643  888899999999999999999999999999998887754  45778999999999999999987  


Q ss_pred             -CCCCCEEEEE-------------------------------------------------cCCceeeeEEeecCCceeeC
Q 020487           79 -WKVGDQVCAL-------------------------------------------------LGGGGYAEKVAVPAGQVLPV  108 (325)
Q Consensus        79 -~~~Gd~V~~~-------------------------------------------------~~~g~~~~~~~~~~~~~~~~  108 (325)
                       |++||+|++.                                                 ...|+|++|+.++.+.++++
T Consensus        77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  156 (367)
T cd08263          77 GLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL  156 (367)
T ss_pred             cCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence             9999999872                                                 13588999999999999999


Q ss_pred             CCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCE
Q 020487          109 PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADV  187 (325)
Q Consensus       109 p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~  187 (325)
                      |+++++.+++.++..+++||.++.....++++++++|+| +|.+|++++++|+..|++ |++++.++++.+.++++|++.
T Consensus       157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~  235 (367)
T cd08263         157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATH  235 (367)
T ss_pred             CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCce
Confidence            999999999999999999999998878889999999996 599999999999999997 888888888888888999999


Q ss_pred             EEeCCCchHHHHHHHHhCCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCc-ccccchHHHHhhccEeeecccc
Q 020487          188 CINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLR  265 (325)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~  265 (325)
                      +++.+...+.+.+.+..+++++|+++||+++. .+..++++++++|+++.+|..... ...++...++.+++++.++...
T Consensus       236 v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (367)
T cd08263         236 TVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA  315 (367)
T ss_pred             EecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC
Confidence            99888778888888888778899999999987 778889999999999999865432 2345555555678887774211


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHCCccccc--cccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          266 SRSTENKALIVSEVEKNVWPAIAVGKVKPV--IYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      .    .     .+.++.+.+++.++.+.+.  +++.++++++.++++.+++++..||+|+.
T Consensus       316 ~----~-----~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         316 R----P-----RQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             C----c-----HHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence            1    1     2345558899999998763  57889999999999999999888999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=2.7e-39  Score=288.39  Aligned_cols=310  Identities=22%  Similarity=0.333  Sum_probs=254.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++.   +++++.+.|.+.++||+||+.++++|++|++...+.++. ...|.++|||++|+|+++|++++.++
T Consensus         1 mka~~~~~~~~---~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G~e~~G~V~~vG~~v~~~~   76 (351)
T cd08285           1 MKAFAMLGIGK---VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILGHEAVGVVEEVGSEVKDFK   76 (351)
T ss_pred             CceEEEccCCc---cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccCcceEEEEEEecCCcCccC
Confidence            99999998764   778889998899999999999999999999988876543 23478999999999999999999999


Q ss_pred             CCCEEEEEc------------------------------CCceeeeEEeecCC--ceeeCCCCCCHHhhccCcchHHHHH
Q 020487           81 VGDQVCALL------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVW  128 (325)
Q Consensus        81 ~Gd~V~~~~------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~a~  128 (325)
                      +||+|+...                              .+|+|++|+.++.+  .++++|+++++++++.++.+++++|
T Consensus        77 ~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~  156 (351)
T cd08285          77 PGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGF  156 (351)
T ss_pred             CCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHH
Confidence            999999742                              25899999999874  8999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCC
Q 020487          129 STVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       129 ~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      +++ ....++++++++|+|+ |.+|++++|+|+.+|+ .|+++++++++.+.++++|++++++....++...+.+.++++
T Consensus       157 ~~~-~~~~~~~g~~vlI~g~-g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~  234 (351)
T cd08285         157 HGA-ELANIKLGDTVAVFGI-GPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGK  234 (351)
T ss_pred             HHH-HccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHhCCC
Confidence            996 6778999999999975 9999999999999999 588888888899999999999999888777777888877777


Q ss_pred             cccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCc-ccccchHH--HHhhccEeeecccccccchhHHHHHHHHHHHH
Q 020487          208 GVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITS--LFAKRLTVQAAGLRSRSTENKALIVSEVEKNV  283 (325)
Q Consensus       208 ~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  283 (325)
                      ++|+++||+|+ ..+..++++++++|+++.+|..... ...++...  ...+..++.+......         .+.++++
T Consensus       235 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~  305 (351)
T cd08285         235 GVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGG---------RLRMERL  305 (351)
T ss_pred             CCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCc---------cccHHHH
Confidence            89999999996 4568889999999999999876542 12223212  1234445554322111         1234448


Q ss_pred             HHHHHCCcccc---ccccccchhhHHHHHHHHHhCC-CceeEEEeC
Q 020487          284 WPAIAVGKVKP---VIYKYLPLCEAAEAHQLMESSQ-HIGKIMLVP  325 (325)
Q Consensus       284 ~~~~~~g~l~~---~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi~~  325 (325)
                      ++++.+|++++   .+...|+++++++|++.+.+++ ...|+++++
T Consensus       306 ~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         306 ASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             HHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            89999999887   3456799999999999998876 357998864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4e-39  Score=281.93  Aligned_cols=303  Identities=28%  Similarity=0.382  Sum_probs=256.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      ||++++...+ ++.+++++.+.|.+.++||+||+.++++|+.|.+......     .|.++|+|++|+|+++|+++..|+
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~~-----~~~~~g~e~~G~v~~~G~~v~~~~   74 (305)
T cd08270           1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAERP-----DGAVPGWDAAGVVERAAADGSGPA   74 (305)
T ss_pred             CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccCC-----CCCcccceeEEEEEEeCCCCCCCC
Confidence            8999998765 6778899999999999999999999999999998765221     256899999999999999999999


Q ss_pred             CCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG  160 (325)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a  160 (325)
                      +||+|+++...|+|++|+.++.+.++++|+++++++++++++.+.+||+++...... +|++++|+|++|.+|.++++++
T Consensus        75 ~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a  153 (305)
T cd08270          75 VGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLA  153 (305)
T ss_pred             CCCEEEEecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHH
Confidence            999999987679999999999999999999999999999999999999998665554 5999999999999999999999


Q ss_pred             HHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEecc
Q 020487          161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      +..|++|+.+++++++.+.++++|++..+....        +..+ +++|+++||+|+..+...+++++++|+++.+|..
T Consensus       154 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--------~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~  224 (305)
T cd08270         154 ALAGAHVVAVVGSPARAEGLRELGAAEVVVGGS--------ELSG-APVDLVVDSVGGPQLARALELLAPGGTVVSVGSS  224 (305)
T ss_pred             HHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccc--------cccC-CCceEEEECCCcHHHHHHHHHhcCCCEEEEEecc
Confidence            999999999999999999999999876553222        1122 4799999999998888899999999999999876


Q ss_pred             CCcccccchHHHHh--hccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCc
Q 020487          241 GGAKTELNITSLFA--KRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHI  318 (325)
Q Consensus       241 ~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~  318 (325)
                      ......++...+..  +++++.++.+..      +....+.++.+.+++.++++.+.+.+++++++++++++.+.+++..
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~  298 (305)
T cd08270         225 SGEPAVFNPAAFVGGGGGRRLYTFFLYD------GEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFR  298 (305)
T ss_pred             CCCcccccHHHHhcccccceEEEEEccC------HHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHHHHcCCCC
Confidence            53333445555544  588888776553      1123456677889999999987778899999999999999999988


Q ss_pred             eeEEEeC
Q 020487          319 GKIMLVP  325 (325)
Q Consensus       319 gkvvi~~  325 (325)
                      ||+|+++
T Consensus       299 gkvvi~~  305 (305)
T cd08270         299 GKAVLDV  305 (305)
T ss_pred             ceEEEeC
Confidence            9999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=4.2e-39  Score=287.09  Aligned_cols=310  Identities=30%  Similarity=0.449  Sum_probs=261.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC-----------CCCCCCCCCCceeEEE
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-----------PKGASPYPGLECSGTI   69 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~-----------~~~~p~~~G~e~~G~V   69 (325)
                      |||+++..++.+  +++++.|.|++.++||+|++.++++|++|++.+.|.++.           ...+|.++|+|++|+|
T Consensus         1 ~~a~~~~~~~~~--~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V   78 (350)
T cd08240           1 MKAAAVVEPGKP--LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEV   78 (350)
T ss_pred             CeeEEeccCCCC--ceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEE
Confidence            899999887765  788899999999999999999999999999998876542           2234678999999999


Q ss_pred             EEecCCCCCCCCCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcc
Q 020487           70 LSVGKNVSRWKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE  122 (325)
Q Consensus        70 ~~vG~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  122 (325)
                      +++|++++.+++||+|+++.                           ..|++++|+.++.+.++++|+++++.+++.+..
T Consensus        79 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~  158 (350)
T cd08240          79 VAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLAC  158 (350)
T ss_pred             EeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhc
Confidence            99999999999999998762                           358899999999999999999999999999999


Q ss_pred             hHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHH
Q 020487          123 VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK  201 (325)
Q Consensus       123 ~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  201 (325)
                      .+.+||.++.....++++++++|+|+ |.+|++++++|+..|+ +|++++.++++.+.++++|++.+++.+...+.+.+.
T Consensus       159 ~~~tA~~~~~~~~~~~~~~~vlI~g~-g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  237 (350)
T cd08240         159 SGLTAYSAVKKLMPLVADEPVVIIGA-GGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRII  237 (350)
T ss_pred             hhhhHHHHHHhcccCCCCCEEEEECC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHHHH
Confidence            99999999977777778999999975 9999999999999999 789999899999999999998888877767777777


Q ss_pred             HHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHH
Q 020487          202 EETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE  280 (325)
Q Consensus       202 ~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  280 (325)
                      +..++ ++|+++||+|. ..+..++++|+++|+++.+|..... ...+...+..+++++.+......          +.+
T Consensus       238 ~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~----------~~~  305 (350)
T cd08240         238 KAAGG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE-ATLPLPLLPLRALTIQGSYVGSL----------EEL  305 (350)
T ss_pred             HHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC-CcccHHHHhhcCcEEEEcccCCH----------HHH
Confidence            77766 89999999984 5678889999999999999865532 22334444457788777654321          234


Q ss_pred             HHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          281 KNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       281 ~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ..+++++.+|.+++.+...|+++++++|++.+.+++..+|++++|
T Consensus       306 ~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  350 (350)
T cd08240         306 RELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLKP  350 (350)
T ss_pred             HHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence            448889999998876778999999999999999998889999875

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=3.8e-39  Score=291.65  Aligned_cols=314  Identities=27%  Similarity=0.453  Sum_probs=262.1

Q ss_pred             CEEEEEcC--CCCC-cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC---------CCCCC-CCCCCceeE
Q 020487            1 MKAIVITQ--PGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP---------PKGAS-PYPGLECSG   67 (325)
Q Consensus         1 m~a~~~~~--~~~~-~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~---------~~~~p-~~~G~e~~G   67 (325)
                      |||+++..  .+++ +.+++++.+.|.|+++||+|++.++++|.+|.+...+....         ....| .++|||++|
T Consensus         8 ~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~G   87 (398)
T TIGR01751         8 MYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDASG   87 (398)
T ss_pred             hhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceEE
Confidence            89999964  6655 56999999999999999999999999999998876553210         00113 378999999


Q ss_pred             EEEEecCCCCCCCCCCEEEEEc----------------------------CCceeeeEEeecCCceeeCCCCCCHHhhcc
Q 020487           68 TILSVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAA  119 (325)
Q Consensus        68 ~V~~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~  119 (325)
                      +|+++|++++.+++||+|+..+                            .+|+|++|+.++.+.++++|+++++++++.
T Consensus        88 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~  167 (398)
T TIGR01751        88 VVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAAC  167 (398)
T ss_pred             EEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHhh
Confidence            9999999999999999998864                            258999999999999999999999999999


Q ss_pred             CcchHHHHHHHHHh--hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCc---
Q 020487          120 FPEVACTVWSTVFM--TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE---  194 (325)
Q Consensus       120 l~~~~~~a~~~l~~--~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---  194 (325)
                      +.....+||.++..  ..++.++++++|+|++|.+|++++++++.+|++++++++++++.+.++++|++.+++....   
T Consensus       168 ~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  247 (398)
T TIGR01751       168 PGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAVIDRNDFGHW  247 (398)
T ss_pred             ccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEEecCCCcchh
Confidence            99999999999854  4678999999999999999999999999999999999989999999999999988876432   


Q ss_pred             -------------------hHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhh
Q 020487          195 -------------------DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK  255 (325)
Q Consensus       195 -------------------~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~  255 (325)
                                         .+...+.+.++++++|++|||+|...+...+++++++|+++.+|........++...++.+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  327 (398)
T TIGR01751       248 GRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLWMR  327 (398)
T ss_pred             hccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCcCHHHHhhc
Confidence                               2445566777777899999999988888899999999999999876654345556666667


Q ss_pred             ccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          256 RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       256 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      +.++.++.....          +.++.+.+++.++.+.+.+++++++++++++++.+.+++..||+|++
T Consensus       328 ~~~~~~~~~~~~----------~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  386 (398)
T TIGR01751       328 QKRIQGSHFANL----------REAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVL  386 (398)
T ss_pred             ccEEEccccCcH----------HHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEE
Confidence            777777644321          12344888899999988788999999999999999999988999875

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=6.9e-39  Score=283.42  Aligned_cols=314  Identities=29%  Similarity=0.427  Sum_probs=264.3

Q ss_pred             CEEEEEcCCCC--CcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCC
Q 020487            1 MKAIVITQPGS--PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         1 m~a~~~~~~~~--~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      |||+.+..++.  ++.+++++.+.|.+.++|++||+.++++|++|++...|..+....+|.++|+|++|+|+.+|++++.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~   81 (329)
T cd08250           2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTD   81 (329)
T ss_pred             ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCC
Confidence            89999998877  6778999999999999999999999999999999988876544456889999999999999999999


Q ss_pred             CCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHH
Q 020487           79 WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQ  158 (325)
Q Consensus        79 ~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~  158 (325)
                      +++||+|+++. .|+|++|+.++.+.++++|++  ..+++.++.++.+||+++.+..+++++++++|+|++|.+|.++++
T Consensus        82 ~~~Gd~V~~~~-~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~  158 (329)
T cd08250          82 FKVGDAVATMS-FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQ  158 (329)
T ss_pred             CCCCCEEEEec-CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHH
Confidence            99999999885 488999999999999999997  346778999999999999777889999999999999999999999


Q ss_pred             HHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEe
Q 020487          159 MGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       159 ~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g  238 (325)
                      +++..|++|+++++++++.+.++++|++.+++.+...+.+.+....+ +++|+++||+|+..+..++++++++|+++.+|
T Consensus       159 ~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~-~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g  237 (329)
T cd08250         159 LAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYP-KGVDVVYESVGGEMFDTCVDNLALKGRLIVIG  237 (329)
T ss_pred             HHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcC-CCCeEEEECCcHHHHHHHHHHhccCCeEEEEe
Confidence            99999999999999999999999999988888777666666666554 68999999999988889999999999999998


Q ss_pred             ccCCcc----------cccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccc--cccccchhhHH
Q 020487          239 TQGGAK----------TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV--IYKYLPLCEAA  306 (325)
Q Consensus       239 ~~~~~~----------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~l~~~~  306 (325)
                      ......          ..++ ...+.+++++.+..+.....     ...+.++.+.+++.++.+.+.  ....+++++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  311 (329)
T cd08250         238 FISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAK-----LIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVA  311 (329)
T ss_pred             cccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHH-----HHHHHHHHHHHHHHCCCeeeeECCccccCHHHHH
Confidence            764321          1112 23456788888776532211     134566668899999988763  35669999999


Q ss_pred             HHHHHHHhCCCceeEEEe
Q 020487          307 EAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       307 ~a~~~~~~~~~~gkvvi~  324 (325)
                      +|++.+.+++..+|++++
T Consensus       312 ~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         312 DAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             HHHHHHHcCCCCceEEeC
Confidence            999999988888898874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=4.3e-39  Score=286.79  Aligned_cols=309  Identities=28%  Similarity=0.445  Sum_probs=258.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~-~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      ||++++..++.   +++.+.+.|.| .++||+||+.++++|++|++.+.|.++. ..+|.++|+|++|+|+++|++++++
T Consensus         1 ~ka~~~~~~~~---~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~~   76 (347)
T cd05278           1 MKALVYLGPGK---IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHEFVGEVVEVGSDVKRL   76 (347)
T ss_pred             CceEEEecCCc---eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccceEEEEEEECCCcccc
Confidence            89999987654   88889999999 9999999999999999999999887764 3447899999999999999999999


Q ss_pred             CCCCEEEEE------------------------------cCCceeeeEEeecCC--ceeeCCCCCCHHhhccCcchHHHH
Q 020487           80 KVGDQVCAL------------------------------LGGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTV  127 (325)
Q Consensus        80 ~~Gd~V~~~------------------------------~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~a  127 (325)
                      ++||+|++.                              ..+|+|++|++++.+  .++++|+++++++++.++..+.+|
T Consensus        77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta  156 (347)
T cd05278          77 KPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTG  156 (347)
T ss_pred             CCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhhe
Confidence            999999872                              125899999999987  899999999999999999999999


Q ss_pred             HHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCC
Q 020487          128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       128 ~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  206 (325)
                      |+++ ...+++++++|+|.|+ |.+|.+++|+|+.+|+ +++++.+++++.+.++++|++.+++.+...+.+.+.+.+++
T Consensus       157 ~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~~~~  234 (347)
T cd05278         157 FHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGG  234 (347)
T ss_pred             eehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHHcCC
Confidence            9998 6778999999999875 9999999999999997 88888888888888889999999988877777888888777


Q ss_pred             CcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHH
Q 020487          207 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWP  285 (325)
Q Consensus       207 ~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (325)
                      +++|+++||+++ ..+..++++|+++|+++.+|..............+.+++++.+.....          .+.++.+.+
T Consensus       235 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~  304 (347)
T cd05278         235 RGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV----------RARMPELLD  304 (347)
T ss_pred             CCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCc----------hhHHHHHHH
Confidence            789999999987 567888999999999999986543211111122335677776643211          234555888


Q ss_pred             HHHCCccccc--cccccchhhHHHHHHHHHhCCC-ceeEEEeC
Q 020487          286 AIAVGKVKPV--IYKYLPLCEAAEAHQLMESSQH-IGKIMLVP  325 (325)
Q Consensus       286 ~~~~g~l~~~--~~~~~~l~~~~~a~~~~~~~~~-~gkvvi~~  325 (325)
                      ++.++.+++.  +...|++++++++++.+..++. .+|++++|
T Consensus       305 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~  347 (347)
T cd05278         305 LIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP  347 (347)
T ss_pred             HHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence            9999998763  5688999999999999987776 68999886

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.5e-38  Score=281.90  Aligned_cols=313  Identities=34%  Similarity=0.555  Sum_probs=271.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++.+.+.++.+++++.+.|.+.++|++|++.++++|++|++...|.++.....|.++|||++|+|+++|+++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK   80 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence            99999998766667888888888889999999999999999999998887665444577899999999999999999999


Q ss_pred             CCCEEEEEcC---------------------CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCC
Q 020487           81 VGDQVCALLG---------------------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP  139 (325)
Q Consensus        81 ~Gd~V~~~~~---------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~  139 (325)
                      +||+|++...                     +|+|++|+.++.+.++++|+++++.+++.+..++.+||+++.....+++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~  160 (336)
T cd08276          81 VGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKP  160 (336)
T ss_pred             CCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCC
Confidence            9999998751                     5889999999999999999999999999999999999999877788999


Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCC-chHHHHHHHHhCCCcccEEEeCCCh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      |++++|+| +|.+|++++++++..|++|++++.++++.+.++++|.+.+++... ..+...+.+.++++++|++++|++.
T Consensus       161 g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~  239 (336)
T cd08276         161 GDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGP  239 (336)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEECCCh
Confidence            99999996 599999999999999999999999999999998899988888776 6677788888887899999999998


Q ss_pred             HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccccccc
Q 020487          219 SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYK  298 (325)
Q Consensus       219 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~  298 (325)
                      ..+..++++++++|+++.+|.........+...++.+++++.+.....          ...++++.+++.++.+.+....
T Consensus       240 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~l~~~~~~  309 (336)
T cd08276         240 GTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS----------RAQFEAMNRAIEAHRIRPVIDR  309 (336)
T ss_pred             HHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc----------HHHHHHHHHHHHcCCcccccCc
Confidence            888889999999999999987654333455566677899988876532          2344457788888888777778


Q ss_pred             ccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          299 YLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       299 ~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      .+++++++++++.+.+++..+|++++
T Consensus       310 ~~~~~~~~~a~~~~~~~~~~~kvv~~  335 (336)
T cd08276         310 VFPFEEAKEAYRYLESGSHFGKVVIR  335 (336)
T ss_pred             EEeHHHHHHHHHHHHhCCCCceEEEe
Confidence            99999999999999988888899875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.8e-39  Score=284.87  Aligned_cols=309  Identities=30%  Similarity=0.499  Sum_probs=264.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++.+  +++++.+.|.+.++||+||+.++++|++|+....|..+. ..+|.++|+|++|+|+.+|++++.++
T Consensus         1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~~G~~~~~~~   77 (345)
T cd08260           1 MRAAVYEEFGEP--LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD-VTLPHVPGHEFAGVVVEVGEDVSRWR   77 (345)
T ss_pred             CeeEEEecCCCC--cEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC-CCCCeeeccceeEEEEEECCCCccCC
Confidence            999999987765  888899999999999999999999999999998887653 24577899999999999999999999


Q ss_pred             CCCEEEE---------------------------EcCCceeeeEEeecCC--ceeeCCCCCCHHhhccCcchHHHHHHHH
Q 020487           81 VGDQVCA---------------------------LLGGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (325)
Q Consensus        81 ~Gd~V~~---------------------------~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~a~~~l  131 (325)
                      +||+|++                           +..+|+|++|+.++..  .++++|+++++++++.++.++++||+++
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l  157 (345)
T cd08260          78 VGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRAL  157 (345)
T ss_pred             CCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHH
Confidence            9999986                           3346899999999975  8999999999999999999999999998


Q ss_pred             HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCC-chHHHHHHHHhCCCccc
Q 020487          132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVD  210 (325)
Q Consensus       132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d  210 (325)
                      ....++.++++++|+| .|.+|++++++|+..|++|+++++++++.+.++++|++.+++.+. .++...+.+..++ ++|
T Consensus       158 ~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~-~~d  235 (345)
T cd08260         158 VHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGG-GAH  235 (345)
T ss_pred             HHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCC-CCC
Confidence            7778899999999999 599999999999999999999999999999999999999998877 6777777777776 899


Q ss_pred             EEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcc--cccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHH
Q 020487          211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI  287 (325)
Q Consensus       211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (325)
                      ++|+|+|. ..+...+++++++|+++.+|......  ..++...+..+++++.+.....          ...++.+++++
T Consensus       236 ~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~  305 (345)
T cd08260         236 VSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMP----------AHRYDAMLALI  305 (345)
T ss_pred             EEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCC----------HHHHHHHHHHH
Confidence            99999984 56778899999999999998765432  3445555667888888865421          12444588899


Q ss_pred             HCCccccc--cccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          288 AVGKVKPV--IYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       288 ~~g~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      .++.+.+.  +...++++++++|++.+.+++..+|+|+.
T Consensus       306 ~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         306 ASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             HcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            99988753  57899999999999999999888998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=1.1e-38  Score=281.39  Aligned_cols=313  Identities=23%  Similarity=0.348  Sum_probs=257.3

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (325)
Q Consensus         2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (325)
                      ||+++...+.++.+++++.|.|.+.++||+||+.++++|++|+..+.|..+....+|.++|||++|+|+.  +++..|++
T Consensus         1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~   78 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE   78 (323)
T ss_pred             CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence            6889998887778999999999999999999999999999999999887643334578899999999998  56678999


Q ss_pred             CCEEEEEc------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhh--cCCCCCC-EEEEEcCCchH
Q 020487           82 GDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT--SHLSPGE-SFLVHGGSSGI  152 (325)
Q Consensus        82 Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~--~~~~~~~-~vli~g~~g~~  152 (325)
                      ||+|+++.      .+|++++|+.++.+.++++|+++++++++.++..+.+++.++...  ..+.+++ +++|+|++|.+
T Consensus        79 Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~v  158 (323)
T TIGR02823        79 GDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGV  158 (323)
T ss_pred             CCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHH
Confidence            99999875      368999999999999999999999999999999999998876433  3478898 99999999999


Q ss_pred             HHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCC
Q 020487          153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG  232 (325)
Q Consensus       153 G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g  232 (325)
                      |.+++++|+.+|+++++++.++++++.++++|++.+++......  .+....++ ++|+++||+|++.+...+++++++|
T Consensus       159 g~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G  235 (323)
T TIGR02823       159 GSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSP--PGKPLEKE-RWAGAVDTVGGHTLANVLAQLKYGG  235 (323)
T ss_pred             HHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHH--HHHHhcCC-CceEEEECccHHHHHHHHHHhCCCC
Confidence            99999999999999999998888889899999988887654332  34444443 5999999999988888999999999


Q ss_pred             EEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHH
Q 020487          233 RLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLM  312 (325)
Q Consensus       233 ~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~  312 (325)
                      +++.+|.........+...++.+++++.+........    ....+.++.+.+++..+.+... ...|+++++++|++.+
T Consensus       236 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~a~~~~  310 (323)
T TIGR02823       236 AVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPM----ALREAAWQRLATDLKPRNLESI-TREITLEELPEALEQI  310 (323)
T ss_pred             EEEEEcccCCCCccccHHHHhhcceEEEEEeccccCc----hhHHHHHHHHHHHhhcCCCcCc-eeeecHHHHHHHHHHH
Confidence            9999997653333344455657888888865432211    2223455557777778887654 4689999999999999


Q ss_pred             HhCCCceeEEEe
Q 020487          313 ESSQHIGKIMLV  324 (325)
Q Consensus       313 ~~~~~~gkvvi~  324 (325)
                      .+++..+|+|++
T Consensus       311 ~~~~~~~k~vv~  322 (323)
T TIGR02823       311 LAGQHRGRTVVD  322 (323)
T ss_pred             hCCCccceEEEe
Confidence            999999999875

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=2.5e-38  Score=278.93  Aligned_cols=324  Identities=60%  Similarity=0.976  Sum_probs=277.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      ||++.+..++.+..+++++.+.+++++++++|++.++++|++|+....+.++....+|.++|||++|+|+.+|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK   80 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence            89999988777777888888777789999999999999999999988776654444577899999999999999999999


Q ss_pred             CCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG  160 (325)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a  160 (325)
                      +||+|+++..+|+|++|+.++...++++|+++++.++++++.+..++|.++.+...++++++++|+|+++.+|.++++++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a  160 (325)
T TIGR02824        81 VGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLA  160 (325)
T ss_pred             CCCEEEEccCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHH
Confidence            99999998777999999999999999999999999999999999999999878889999999999999999999999999


Q ss_pred             HHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEecc
Q 020487          161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      +..|++|+++++++++.+.++.+|.+.+++.....+...+.....++++|++++|+|...+...+++++++|+++.+|..
T Consensus       161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~  240 (325)
T TIGR02824       161 KAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQ  240 (325)
T ss_pred             HHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhccCcEEEEEecC
Confidence            99999999999999888888888888887777666777777777767899999999988788889999999999999875


Q ss_pred             CCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCcee
Q 020487          241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGK  320 (325)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gk  320 (325)
                      ......++...++.+++++.+...........+......+.++++++.++.+.+..+..+++++++++++.+.++...+|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (325)
T TIGR02824       241 GGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGK  320 (325)
T ss_pred             CCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcce
Confidence            43222455666667899999887655322233334556677788999999988778889999999999999998888889


Q ss_pred             EEEe
Q 020487          321 IMLV  324 (325)
Q Consensus       321 vvi~  324 (325)
                      ++++
T Consensus       321 ~v~~  324 (325)
T TIGR02824       321 IVLT  324 (325)
T ss_pred             EEEe
Confidence            8875

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=1.1e-38  Score=285.42  Aligned_cols=310  Identities=25%  Similarity=0.363  Sum_probs=262.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++++  +++++.+.|++.++||+|++.++++|++|+..+.|.++.  .+|.++|+|++|+|+++|++++.++
T Consensus         1 m~a~~~~~~~~~--~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~   76 (363)
T cd08279           1 MRAAVLHEVGKP--LEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPA--PLPAVLGHEGAGVVEEVGPGVTGVK   76 (363)
T ss_pred             CeEEEEecCCCC--ceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCC--CCCccccccceEEEEEeCCCccccC
Confidence            899999988755  888999999999999999999999999999998887753  3467899999999999999999999


Q ss_pred             CCCEEEEE-----------------------------------------------cCCceeeeEEeecCCceeeCCCCCC
Q 020487           81 VGDQVCAL-----------------------------------------------LGGGGYAEKVAVPAGQVLPVPSGVS  113 (325)
Q Consensus        81 ~Gd~V~~~-----------------------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~  113 (325)
                      +||+|++.                                               ...|+|++|+.++.+.++++|++++
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~  156 (363)
T cd08279          77 PGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP  156 (363)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence            99999983                                               2358899999999999999999999


Q ss_pred             HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCC
Q 020487          114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYK  192 (325)
Q Consensus       114 ~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~  192 (325)
                      +++++.+++...+||.++....+++++++++|+|+ |.+|.+++++++..|++ |++++.++++.+.++++|++++++.+
T Consensus       157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~  235 (363)
T cd08279         157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNAS  235 (363)
T ss_pred             hHHeehhcchhHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCC
Confidence            99999999999999999888888999999999975 99999999999999996 99999999999988899999999888


Q ss_pred             CchHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCC-cccccchHHHHhhccEeeecccccccch
Q 020487          193 TEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRSRSTE  270 (325)
Q Consensus       193 ~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~  270 (325)
                      ...+...+.+.+.++++|+++||+++ ..+...+++++++|+++.+|.... ....++...+..++..+.++.+....  
T Consensus       236 ~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  313 (363)
T cd08279         236 EDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSAN--  313 (363)
T ss_pred             CccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcC--
Confidence            77777888888766789999999994 567888999999999999986542 23345555555567777776543321  


Q ss_pred             hHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEE
Q 020487          271 NKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIM  322 (325)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvv  322 (325)
                           ..+.++++++++.++.+.+  .+.++|+++++++|++.+.+++..+.+|
T Consensus       314 -----~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         314 -----PRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             -----cHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence                 1234555888999999876  3678899999999999999888765555

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=2.4e-38  Score=278.97  Aligned_cols=320  Identities=35%  Similarity=0.567  Sum_probs=274.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      ||++++...+.+..+++.+.+.|.+.+++|+|++.++++|++|+..+.|..+.....|.++|||++|+|+++|+++..|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~   80 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK   80 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence            89999988776666888999999999999999999999999999988887654445678899999999999999999999


Q ss_pred             CCCEEEEEc-----CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHH
Q 020487           81 VGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF  155 (325)
Q Consensus        81 ~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~  155 (325)
                      +||+|+++.     ..|++++|+.++.+.++++|+++++.+++.++++..++|+++....++.+|++++|+|+++.+|.+
T Consensus        81 ~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~  160 (325)
T cd08253          81 VGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHA  160 (325)
T ss_pred             CCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHH
Confidence            999999986     358999999999999999999999999999999999999998777889999999999999999999


Q ss_pred             HHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEE
Q 020487          156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF  235 (325)
Q Consensus       156 ~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v  235 (325)
                      ++++++..|++|+++++++++.+.++++|++.+++.....+...+.+.+.++++|++++|.+.......+++++++|+++
T Consensus       161 ~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v  240 (325)
T cd08253         161 AVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIV  240 (325)
T ss_pred             HHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEE
Confidence            99999999999999999999999888899988888777777777887777778999999999988888889999999999


Q ss_pred             EEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhC
Q 020487          236 IIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESS  315 (325)
Q Consensus       236 ~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~  315 (325)
                      .+|... .....+..+++.+++++.+......    .+....+.++.+.+++.++.+.+.....+++++++++++.+.++
T Consensus       241 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  315 (325)
T cd08253         241 VYGSGG-LRGTIPINPLMAKEASIRGVLLYTA----TPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESG  315 (325)
T ss_pred             EEeecC-CcCCCChhHHHhcCceEEeeehhhc----CHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHcC
Confidence            998754 2334455555567777766553322    12234556666778888888887778999999999999999998


Q ss_pred             CCceeEEEeC
Q 020487          316 QHIGKIMLVP  325 (325)
Q Consensus       316 ~~~gkvvi~~  325 (325)
                      ...+|++++|
T Consensus       316 ~~~~kvv~~~  325 (325)
T cd08253         316 GAIGKVVLDP  325 (325)
T ss_pred             CCcceEEEeC
Confidence            8889999875

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=3.3e-38  Score=277.36  Aligned_cols=320  Identities=36%  Similarity=0.522  Sum_probs=272.3

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (325)
Q Consensus         2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (325)
                      ||+....++.+..+++.+.+.+.+.++||+|++.++++|++|+....+.++.  .+|.++|||++|+|+.+|+++.++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~   78 (320)
T cd05286           1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL--PLPFVLGVEGAGVVEAVGPGVTGFKV   78 (320)
T ss_pred             CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC--CCCccCCcceeEEEEEECCCCCCCCC
Confidence            5777777777667888888887789999999999999999999998887653  34678999999999999999999999


Q ss_pred             CCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHH
Q 020487           82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK  161 (325)
Q Consensus        82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~  161 (325)
                      ||+|+++...|+|++|+.++.+.++++|+++++.+++.++....+++.++....++++|++++|+|++|.+|++++++++
T Consensus        79 G~~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~  158 (320)
T cd05286          79 GDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAK  158 (320)
T ss_pred             CCEEEEecCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHH
Confidence            99999985358899999999999999999999999999999999999998788889999999999988999999999999


Q ss_pred             HCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487          162 CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       162 ~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      .+|++|++++.++++.+.++++|++.+++.....+...+.+.+.++++|++++|.++......+++++++|+++.+|...
T Consensus       159 ~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~  238 (320)
T cd05286         159 ALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNAS  238 (320)
T ss_pred             HcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCC
Confidence            99999999999999999999999988888777777778888887778999999999887888899999999999998755


Q ss_pred             CcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeE
Q 020487          242 GAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI  321 (325)
Q Consensus       242 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkv  321 (325)
                      .....++...+..+++++.+.......  ..+....+.++.+.+++.++.+.+...+.|++++++++++.+.++...+|+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~v  316 (320)
T cd05286         239 GPVPPFDLLRLSKGSLFLTRPSLFHYI--ATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTGKL  316 (320)
T ss_pred             CCCCccCHHHHHhcCcEEEEEehhhhc--CCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHHcCCCCceE
Confidence            432334444444678887755433222  122344556677889999998887777899999999999999998888999


Q ss_pred             EEeC
Q 020487          322 MLVP  325 (325)
Q Consensus       322 vi~~  325 (325)
                      +++|
T Consensus       317 v~~~  320 (320)
T cd05286         317 LLIP  320 (320)
T ss_pred             EEeC
Confidence            9987

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=2.4e-38  Score=281.07  Aligned_cols=304  Identities=25%  Similarity=0.339  Sum_probs=246.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++   .+++++.+.|+|.++|++||+.++++|++|++.+.|..+.. .+|.++|||++|+|+++|++++.++
T Consensus         1 m~a~~~~~~~---~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~   76 (339)
T PRK10083          1 MKSIVIEKPN---SLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFA-KYPRVIGHEFFGVIDAVGEGVDAAR   76 (339)
T ss_pred             CeEEEEecCC---eeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcC-CCCcccccceEEEEEEECCCCccCC
Confidence            8999998765   38999999999999999999999999999999988876543 3578999999999999999999999


Q ss_pred             CCCEEE---------------------------EEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487           81 VGDQVC---------------------------ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (325)
Q Consensus        81 ~Gd~V~---------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~  133 (325)
                      +||+|+                           ++..+|+|++|+.++.+.++++|+++++++++ +..++.+++.+ ..
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~-~~  154 (339)
T PRK10083         77 IGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV-TG  154 (339)
T ss_pred             CCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH-HH
Confidence            999998                           34346899999999999999999999998876 55677888854 47


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHH-CCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccE
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKC-QGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~-~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      ..++++|++|+|+|+ |.+|++++|+|+. +|++ ++++++++++.+.++++|++.+++.....+.+.+..  .+.++|+
T Consensus       155 ~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~--~g~~~d~  231 (339)
T PRK10083        155 RTGPTEQDVALIYGA-GPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEE--KGIKPTL  231 (339)
T ss_pred             hcCCCCCCEEEEECC-CHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhc--CCCCCCE
Confidence            778999999999995 9999999999997 5995 777778888999999999999988776665555532  1234679


Q ss_pred             EEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCC
Q 020487          212 ILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG  290 (325)
Q Consensus       212 vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  290 (325)
                      +|||+|. ..+..++++++++|+++.+|.... ...++...+..+++++.+....           .+.++.+++++.+|
T Consensus       232 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~g  299 (339)
T PRK10083        232 IIDAACHPSILEEAVTLASPAARIVLMGFSSE-PSEIVQQGITGKELSIFSSRLN-----------ANKFPVVIDWLSKG  299 (339)
T ss_pred             EEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CceecHHHHhhcceEEEEEecC-----------hhhHHHHHHHHHcC
Confidence            9999995 467888999999999999987543 2233444444566666654321           12344588999999


Q ss_pred             cccc--ccccccchhhHHHHHHHHHhCC-CceeEEEeC
Q 020487          291 KVKP--VIYKYLPLCEAAEAHQLMESSQ-HIGKIMLVP  325 (325)
Q Consensus       291 ~l~~--~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi~~  325 (325)
                      .+++  ++.+.|+++++++|++.+.++. ..+|+++.+
T Consensus       300 ~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~  337 (339)
T PRK10083        300 LIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTF  337 (339)
T ss_pred             CCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEec
Confidence            9887  4689999999999999998653 458998864

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=6.1e-39  Score=279.72  Aligned_cols=318  Identities=40%  Similarity=0.560  Sum_probs=253.2

Q ss_pred             EEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCC---CCCCCC---CCceeEEEEEec-CC
Q 020487            3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPK---GASPYP---GLECSGTILSVG-KN   75 (325)
Q Consensus         3 a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~---~~p~~~---G~e~~G~V~~vG-~~   75 (325)
                      .......+..+....++.++|.|.++|+++++.++++|+.|+.+..|......   .+|.++   |.+.+|.+...| ..
T Consensus         8 ~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~   87 (347)
T KOG1198|consen    8 VSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDV   87 (347)
T ss_pred             EEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEecccccc
Confidence            44445555566677889999999999999999999999999999999887655   667444   444455566666 44


Q ss_pred             CCCCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhc------CCCCCCEEEEEcCC
Q 020487           76 VSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS------HLSPGESFLVHGGS  149 (325)
Q Consensus        76 ~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~------~~~~~~~vli~g~~  149 (325)
                      +..+..||.++.....|+|++|.++++..++++|++++++++|+++.++.+||.++....      ++++|++|||+|++
T Consensus        88 ~~~~~~g~~~~~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggs  167 (347)
T KOG1198|consen   88 VGGWVHGDAVVAFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGS  167 (347)
T ss_pred             ccceEeeeEEeeccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCC
Confidence            567888999988888999999999999999999999999999999999999999999998      89999999999999


Q ss_pred             chHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhcccc
Q 020487          150 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN  229 (325)
Q Consensus       150 g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~  229 (325)
                      |++|++++|+|++.|+..+++++++++.++++++|+++++|+++.++.+.+.+.+ +++||+||||+|+........++.
T Consensus       168 ggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~-~~~~DvVlD~vg~~~~~~~~~~l~  246 (347)
T KOG1198|consen  168 GGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYT-GKGVDVVLDCVGGSTLTKSLSCLL  246 (347)
T ss_pred             cHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhc-CCCccEEEECCCCCccccchhhhc
Confidence            9999999999999997666666699999999999999999999999998988888 779999999999987777788888


Q ss_pred             CCCEEEEEeccCCcccccchHHHH--hhc-----cEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccch
Q 020487          230 IDGRLFIIGTQGGAKTELNITSLF--AKR-----LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPL  302 (325)
Q Consensus       230 ~~g~~v~~g~~~~~~~~~~~~~~~--~~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l  302 (325)
                      .+|+...++.............++  .+.     ..+.+.........    ...+.++.+.+++++|++++.+.+.||+
T Consensus       247 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~l~~~ie~gkikp~i~~~~p~  322 (347)
T KOG1198|consen  247 KGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFV----PSAEYLKALVELIEKGKIKPVIDSVYPF  322 (347)
T ss_pred             cCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeec----CCHHHHHHHHHHHHcCcccCCcceeeeH
Confidence            887654444333221111111111  111     11111111111111    2245566689999999999999999999


Q ss_pred             hhHHHHHHHHHhCCCceeEEEeC
Q 020487          303 CEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       303 ~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++.+|++.+.++...||+++.+
T Consensus       323 ~~~~ea~~~~~~~~~~GK~vl~~  345 (347)
T KOG1198|consen  323 SQAKEAFEKLEKSHATGKVVLEK  345 (347)
T ss_pred             HHHHHHHHHHhhcCCcceEEEEe
Confidence            99999999999999999999864

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=4.7e-38  Score=279.82  Aligned_cols=308  Identities=23%  Similarity=0.402  Sum_probs=259.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~-~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      |||+++..++.   +++++.+.|+| .++||+|++.++++|++|+..+.|.++.. .+|.++|||++|+|+++|++++.+
T Consensus         1 m~a~~~~~~~~---~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~   76 (345)
T cd08286           1 MKALVYHGPGK---ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV-TPGRILGHEGVGVVEEVGSAVTNF   76 (345)
T ss_pred             CceEEEecCCc---eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC-CCCceecccceEEEEEeccCcccc
Confidence            89999987664   88999999986 89999999999999999999998876543 236789999999999999999999


Q ss_pred             CCCCEEEEEc----------------------------CCceeeeEEeecCC--ceeeCCCCCCHHhhccCcchHHHHHH
Q 020487           80 KVGDQVCALL----------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVWS  129 (325)
Q Consensus        80 ~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~a~~  129 (325)
                      ++||+|+...                            .+|+|++|+.++.+  .++++|++++..+++.++..+++||.
T Consensus        77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~  156 (345)
T cd08286          77 KVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYE  156 (345)
T ss_pred             CCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHH
Confidence            9999998742                            13889999999987  89999999999999999999999999


Q ss_pred             HHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCc
Q 020487          130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  208 (325)
Q Consensus       130 ~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  208 (325)
                      ++....+++++++++|.|+ |.+|.+++|+++..| .+|++++.++++...++++|++.+++.....+...+.+.+++++
T Consensus       157 ~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~  235 (345)
T cd08286         157 CGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDGRG  235 (345)
T ss_pred             HHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHhCCCC
Confidence            8777788999999999886 999999999999999 69999888888888889999999998877777777888888778


Q ss_pred             ccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHH
Q 020487          209 VDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI  287 (325)
Q Consensus       209 ~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (325)
                      +|+++||+|. ..+..+++.++++|+++.+|.... ...++...++.+++++.+.....           +.++.+.+++
T Consensus       236 ~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~  303 (345)
T cd08286         236 VDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK-PVDLHLEKLWIKNITITTGLVDT-----------NTTPMLLKLV  303 (345)
T ss_pred             CCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC-CCCcCHHHHhhcCcEEEeecCch-----------hhHHHHHHHH
Confidence            9999999985 456788899999999999986543 34455666677888887753221           2244477888


Q ss_pred             HCCcccc--ccccccchhhHHHHHHHHHhCC--CceeEEEeC
Q 020487          288 AVGKVKP--VIYKYLPLCEAAEAHQLMESSQ--HIGKIMLVP  325 (325)
Q Consensus       288 ~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~--~~gkvvi~~  325 (325)
                      .++.+.+  ++.++|++++++++++.+....  ...|++|.|
T Consensus       304 ~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         304 SSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             HcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            8998765  3578999999999999998753  345898876

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.2e-38  Score=279.26  Aligned_cols=305  Identities=32%  Similarity=0.493  Sum_probs=257.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||++++.++   .+++.+.+.|++.++||+|++.++++|+.|+....+..+.. .+|.++|+|++|+|+++|++++.++
T Consensus         1 ~~a~~~~~~~---~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~   76 (337)
T cd08261           1 MKALVCEKPG---RLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA-SYPRILGHELSGEVVEVGEGVAGLK   76 (337)
T ss_pred             CeEEEEeCCC---ceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC-CCCcccccccEEEEEEeCCCCCCCC
Confidence            8999998765   38899999999999999999999999999999988876543 2367899999999999999999999


Q ss_pred             CCCEEEE---------------------------EcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487           81 VGDQVCA---------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (325)
Q Consensus        81 ~Gd~V~~---------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~  133 (325)
                      +||+|++                           +...|+|++|+.++++ ++++|+++++++++++ ..+++++.++ .
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~  153 (337)
T cd08261          77 VGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-R  153 (337)
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-H
Confidence            9999987                           3235899999999999 9999999999999876 6778888887 7


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                      ..++.+++++||+|+ |.+|.+++++|+.+|++|+++++++++.+.++++|++++++.....+.+.+.+.++++++|+++
T Consensus       154 ~~~l~~g~~vLI~g~-g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vl  232 (337)
T cd08261         154 RAGVTAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVI  232 (337)
T ss_pred             hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCCEEE
Confidence            788999999999975 8999999999999999999999999999999999999999888777788888888877899999


Q ss_pred             eCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcc
Q 020487          214 DCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKV  292 (325)
Q Consensus       214 ~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l  292 (325)
                      ||+|+ ..+..++++|+++|+++.+|.... ....+...+..+++++.+...   .       ..+.++.+.+++.+|.+
T Consensus       233 d~~g~~~~~~~~~~~l~~~G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~~~~l~~~~~i  301 (337)
T cd08261         233 DATGNPASMEEAVELVAHGGRVVLVGLSKG-PVTFPDPEFHKKELTILGSRN---A-------TREDFPDVIDLLESGKV  301 (337)
T ss_pred             ECCCCHHHHHHHHHHHhcCCEEEEEcCCCC-CCccCHHHHHhCCCEEEEecc---C-------ChhhHHHHHHHHHcCCC
Confidence            99976 567888999999999999886542 233444455556777666421   1       12345558889999998


Q ss_pred             cc--ccccccchhhHHHHHHHHHhC-CCceeEEEe
Q 020487          293 KP--VIYKYLPLCEAAEAHQLMESS-QHIGKIMLV  324 (325)
Q Consensus       293 ~~--~~~~~~~l~~~~~a~~~~~~~-~~~gkvvi~  324 (325)
                      ++  .+...+++++++++++.+.++ ...+|+|++
T Consensus       302 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~  336 (337)
T cd08261         302 DPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIE  336 (337)
T ss_pred             ChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEe
Confidence            87  677899999999999999988 477899886

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-38  Score=281.18  Aligned_cols=305  Identities=32%  Similarity=0.468  Sum_probs=256.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++++  +++++.|.|.+.++|++|++.++++|++|++...|.++.. .+|.++|||++|+|+++|++++.++
T Consensus         1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~   77 (334)
T PRK13771          1 MKAVILPGFKQG--YRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRM-KYPVILGHEVVGTVEEVGENVKGFK   77 (334)
T ss_pred             CeeEEEcCCCCC--cEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCC-CCCeeccccceEEEEEeCCCCccCC
Confidence            899999988764  8899999999999999999999999999999888866532 3367899999999999999998899


Q ss_pred             CCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487           81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (325)
Q Consensus        81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~  133 (325)
                      +||+|++..                           .+|+|++|+.++.+.++++|+++++.+++.+.+.+.++|.++..
T Consensus        78 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~  157 (334)
T PRK13771         78 PGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRR  157 (334)
T ss_pred             CCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHh
Confidence            999999863                           15889999999999999999999999999999999999999855


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                      . .++++++++|+|++|.+|++++++++..|++++++++++++.+.++++ ++.+++..  .+.+.+.+. +  ++|+++
T Consensus       158 ~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~v~~~-~--~~d~~l  230 (334)
T PRK13771        158 A-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGS--KFSEEVKKI-G--GADIVI  230 (334)
T ss_pred             c-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCch--hHHHHHHhc-C--CCcEEE
Confidence            5 889999999999999999999999999999999999999999888887 66666554  444555543 3  699999


Q ss_pred             eCCChHHHHHhhccccCCCEEEEEeccCCccc-ccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcc
Q 020487          214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKV  292 (325)
Q Consensus       214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l  292 (325)
                      ||+|+......+++++++|+++.+|....... .......+.+++++.+....          ..+.++.+++++.++.+
T Consensus       231 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l  300 (334)
T PRK13771        231 ETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA----------TKRDVEEALKLVAEGKI  300 (334)
T ss_pred             EcCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC----------CHHHHHHHHHHHHcCCC
Confidence            99999888889999999999999997653221 23344445677888776311          12335558899999999


Q ss_pred             ccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          293 KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       293 ~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ++.+.+.|+++++++|++.+++++..+|+++.|
T Consensus       301 ~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        301 KPVIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             cceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            877889999999999999999888889999875

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=5.4e-38  Score=276.46  Aligned_cols=309  Identities=32%  Similarity=0.507  Sum_probs=256.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      ||++++...+.+..+++.+.+.|.+.++||+||+.++++|++|+....+..+. ...|.++|||++|+|+++|+  ..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~vG~--~~~~   77 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPS-VKFPRVLGIEAVGEVEEAPG--GTFT   77 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCccccceeEEEEEEecC--CCCC
Confidence            89999988776666888888888889999999999999999999998886643 23467899999999999995  5799


Q ss_pred             CCCEEEEEcC------CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHH
Q 020487           81 VGDQVCALLG------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGT  154 (325)
Q Consensus        81 ~Gd~V~~~~~------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~  154 (325)
                      +||+|+++..      +|+|++|+.++...++++|+++++++++.++.++.+||.++.....+++|++++|+|++|.+|+
T Consensus        78 ~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~  157 (320)
T cd08243          78 PGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGL  157 (320)
T ss_pred             CCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHH
Confidence            9999998853      4899999999999999999999999999999999999999988888999999999999999999


Q ss_pred             HHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEE
Q 020487          155 FAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL  234 (325)
Q Consensus       155 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~  234 (325)
                      +++++|+..|++|++++.++++.+.++++|++++++. ...+...+.+.  ++++|+++||+|+..+...+++++++|++
T Consensus       158 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~i~~~--~~~~d~vl~~~~~~~~~~~~~~l~~~g~~  234 (320)
T cd08243         158 AALKLAKALGATVTATTRSPERAALLKELGADEVVID-DGAIAEQLRAA--PGGFDKVLELVGTATLKDSLRHLRPGGIV  234 (320)
T ss_pred             HHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEec-CccHHHHHHHh--CCCceEEEECCChHHHHHHHHHhccCCEE
Confidence            9999999999999999999999999999999887754 44556666666  46899999999998888999999999999


Q ss_pred             EEEeccCCccc--ccchHHHH--hhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHH
Q 020487          235 FIIGTQGGAKT--ELNITSLF--AKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQ  310 (325)
Q Consensus       235 v~~g~~~~~~~--~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~  310 (325)
                      +.+|...+...  ........  .+++++.+.......        ...++.+.+++.++.+.+.+...|+++++++|++
T Consensus       235 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~  306 (320)
T cd08243         235 CMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVP--------QTPLQELFDFVAAGHLDIPPSKVFTFDEIVEAHA  306 (320)
T ss_pred             EEEccCCCCcccCCcchhhhhhhccceEEEecchhhhh--------HHHHHHHHHHHHCCceecccccEEcHHHHHHHHH
Confidence            99987543211  11122222  456666665432211        2345558888999998877788999999999999


Q ss_pred             HHHhCCCceeEEE
Q 020487          311 LMESSQHIGKIML  323 (325)
Q Consensus       311 ~~~~~~~~gkvvi  323 (325)
                      .+.++...+|+++
T Consensus       307 ~~~~~~~~~kvvv  319 (320)
T cd08243         307 YMESNRAFGKVVV  319 (320)
T ss_pred             HHHhCCCCCcEEe
Confidence            9998888888875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.5e-38  Score=278.35  Aligned_cols=315  Identities=40%  Similarity=0.644  Sum_probs=268.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++...+.+..+++.+.+.|.+.+++|+|++.++++|++|++.+.|..+....+|.++|||++|+|+.+|+++..|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK   80 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence            89999987666667888888888889999999999999999999998887654334577899999999999999999999


Q ss_pred             CCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487           81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (325)
Q Consensus        81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~  133 (325)
                      +||+|+...                           ..|+|++|+.++.+.++++|+++++.+++.++..+.+++.++.+
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~  160 (342)
T cd08266          81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVT  160 (342)
T ss_pred             CCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHH
Confidence            999999762                           24789999999999999999999999999999999999999878


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                      ...+.++++++|+|+++.+|++++++++..|++|+++++++++.+.++.++.+.+++.....+.+.+.+.+.++++|+++
T Consensus       161 ~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i  240 (342)
T cd08266         161 RARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVDVVV  240 (342)
T ss_pred             hcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCCcEEE
Confidence            88899999999999988999999999999999999999999988888888887778777666777777777767899999


Q ss_pred             eCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccc
Q 020487          214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK  293 (325)
Q Consensus       214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  293 (325)
                      +++|...+...+++++++|+++.+|.........+....+.+++++.+......          ..++.+.+++.++.+.
T Consensus       241 ~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~l~  310 (342)
T cd08266         241 EHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTK----------AELDEALRLVFRGKLK  310 (342)
T ss_pred             ECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCH----------HHHHHHHHHHHcCCcc
Confidence            999998888899999999999999876543333444445667888777654321          2344478889999988


Q ss_pred             cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          294 PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       294 ~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +.++..|+++++++|++.+.++...+|++++|
T Consensus       311 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         311 PVIDSVFPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             cceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            87889999999999999999888889999875

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=4.5e-38  Score=279.23  Aligned_cols=310  Identities=32%  Similarity=0.472  Sum_probs=264.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      ||++++..++++. +.+++.+.|.+.+++|+|++.++++|++|.....|..+....+|.++|+|++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~   79 (338)
T cd08254           1 MKAWRFHKGSKGL-LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFK   79 (338)
T ss_pred             CeeEEEecCCCCc-eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCC
Confidence            8999999888875 788888899999999999999999999999999888764444577899999999999999999999


Q ss_pred             CCCEEEE------------------Ec---------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487           81 VGDQVCA------------------LL---------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (325)
Q Consensus        81 ~Gd~V~~------------------~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~  133 (325)
                      +||+|+.                  ++         .+|+|++|+.++.+.++++|+++++.+++.++.++.+||.++..
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~  159 (338)
T cd08254          80 VGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVR  159 (338)
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHh
Confidence            9999986                  22         25899999999999999999999999999999999999999988


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                      ...+++++++||.|+ |.+|.+++++|+..|++|++++.++++.+.++++|.+.+++.........+ +...++++|+++
T Consensus       160 ~~~~~~~~~vli~g~-g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~D~vi  237 (338)
T cd08254         160 AGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKK-AAGLGGGFDVIF  237 (338)
T ss_pred             ccCCCCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHH-HHhcCCCceEEE
Confidence            888999999999875 899999999999999999999999999999999999888877766665555 666777899999


Q ss_pred             eCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcc
Q 020487          214 DCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKV  292 (325)
Q Consensus       214 ~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l  292 (325)
                      ||+|. ..+..++++|+++|+++.+|.... ...++...+..++..+.+.....          .+.++.+.+++.++.+
T Consensus       238 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ll~~~~l  306 (338)
T cd08254         238 DFVGTQPTFEDAQKAVKPGGRIVVVGLGRD-KLTVDLSDLIARELRIIGSFGGT----------PEDLPEVLDLIAKGKL  306 (338)
T ss_pred             ECCCCHHHHHHHHHHhhcCCEEEEECCCCC-CCccCHHHHhhCccEEEEeccCC----------HHHHHHHHHHHHcCCC
Confidence            99985 467888999999999999976442 23355566677788777754321          1234447888999998


Q ss_pred             ccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          293 KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       293 ~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      .+. .+.+++++++++++.+.+++..+|+|+.|
T Consensus       307 ~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         307 DPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             ccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            866 68899999999999999999999999987

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=9.9e-39  Score=283.31  Aligned_cols=312  Identities=29%  Similarity=0.393  Sum_probs=255.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++ +..+++++.+.|+|+++||+|++.++++|++|+....+..+  ..+|.++|+|++|+|+.+|++++.++
T Consensus         1 m~a~~~~~~~-~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~--~~~~~~~g~e~~G~v~~vG~~v~~~~   77 (339)
T cd08249           1 QKAAVLTGPG-GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFI--PSYPAILGCDFAGTVVEVGSGVTRFK   77 (339)
T ss_pred             CceEEeccCC-CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeecccc--cCCCceeeeeeeEEEEEeCCCcCcCC
Confidence            8999999887 66699999999999999999999999999999987755441  12356899999999999999999999


Q ss_pred             CCCEEEEEcC--------CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCC----------CCCCE
Q 020487           81 VGDQVCALLG--------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL----------SPGES  142 (325)
Q Consensus        81 ~Gd~V~~~~~--------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~----------~~~~~  142 (325)
                      +||+|+++..        +|+|++|+.++.+.++++|+++++++++.++..+.++|+++....++          +++++
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~  157 (339)
T cd08249          78 VGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKP  157 (339)
T ss_pred             CCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCE
Confidence            9999999864        48999999999999999999999999999999999999998666544          78999


Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh-HHH
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYF  221 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~  221 (325)
                      ++|+|++|.+|++++++++.+|++|+.++ +.++.+.++++|++++++.....+.+.+++.++ +++|+++|++|. ..+
T Consensus       158 vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~-~~~d~vl~~~g~~~~~  235 (339)
T cd08249         158 VLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATG-GKLRYALDCISTPESA  235 (339)
T ss_pred             EEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHHhcCCCEEEECCCchHHHHHHHhcC-CCeeEEEEeeccchHH
Confidence            99999999999999999999999999888 568888889999999998888788888877766 579999999997 778


Q ss_pred             HHhhccccC--CCEEEEEeccCCcccccchHHHHhhccEeeecccccccc--hhHHHHHHHHHHHHHHHHHCCccccccc
Q 020487          222 QRNLGSLNI--DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRST--ENKALIVSEVEKNVWPAIAVGKVKPVIY  297 (325)
Q Consensus       222 ~~~~~~l~~--~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~~~~  297 (325)
                      ...++++++  +|+++.+|......       .+..+++...........  ...+......++.+.+++.++.+.+...
T Consensus       236 ~~~~~~l~~~~~g~~v~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  308 (339)
T cd08249         236 QLCAEALGRSGGGKLVSLLPVPEET-------EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPV  308 (339)
T ss_pred             HHHHHHHhccCCCEEEEecCCCccc-------cCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCc
Confidence            899999999  99999998654321       011222222222111100  0111223345566888999999887666


Q ss_pred             cccc--hhhHHHHHHHHHhCC-CceeEEEe
Q 020487          298 KYLP--LCEAAEAHQLMESSQ-HIGKIMLV  324 (325)
Q Consensus       298 ~~~~--l~~~~~a~~~~~~~~-~~gkvvi~  324 (325)
                      ..++  ++++++|++.+.+++ ..+|+|++
T Consensus       309 ~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~  338 (339)
T cd08249         309 RVVEGGLEGVQEGLDLLRKGKVSGEKLVVR  338 (339)
T ss_pred             eecCCcHHHHHHHHHHHHCCCccceEEEEe
Confidence            7788  999999999999888 88999986

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=4.6e-38  Score=279.15  Aligned_cols=304  Identities=26%  Similarity=0.412  Sum_probs=253.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      ||++++.++++..  .+++.+.|++.++||+||+.++++|++|++.+.|..+..  .|.++|||++|+|+++|++++.|+
T Consensus         1 mka~~~~~~~~~~--~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~~--~~~~~g~e~~G~V~~~G~~v~~~~   76 (338)
T PRK09422          1 MKAAVVNKDHTGD--VVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDK--TGRILGHEGIGIVKEVGPGVTSLK   76 (338)
T ss_pred             CeEEEecCCCCCc--eEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCCC--CCccCCcccceEEEEECCCCccCC
Confidence            9999999877642  278899999999999999999999999999988876532  267899999999999999999999


Q ss_pred             CCCEEEE-----------Ec-----------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487           81 VGDQVCA-----------LL-----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (325)
Q Consensus        81 ~Gd~V~~-----------~~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~  132 (325)
                      +||+|+.           ++                 .+|+|++|+.++.+.++++|+++++.+++.++..+.+||+++ 
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-  155 (338)
T PRK09422         77 VGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-  155 (338)
T ss_pred             CCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-
Confidence            9999986           22                 258999999999999999999999999999999999999998 


Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCC-chHHHHHHHHhCCCccc
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVD  210 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d  210 (325)
                      ..++++++++++|+|+ |.+|++++++|+.. |++|+++++++++++.++++|++.+++.+. ..+.+.+.+..+  ++|
T Consensus       156 ~~~~~~~g~~vlV~g~-g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~--~~d  232 (338)
T PRK09422        156 KVSGIKPGQWIAIYGA-GGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTG--GAH  232 (338)
T ss_pred             HhcCCCCCCEEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcC--CCc
Confidence            7788999999999995 99999999999984 999999999999999999999998888754 556667777665  588


Q ss_pred             -EEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHC
Q 020487          211 -VILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV  289 (325)
Q Consensus       211 -~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (325)
                       +++++.+...+...+++++++|+++.+|.... ...++...+..++..+.++....          .+.++.+++++.+
T Consensus       233 ~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~  301 (338)
T PRK09422        233 AAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE-SMDLSIPRLVLDGIEVVGSLVGT----------RQDLEEAFQFGAE  301 (338)
T ss_pred             EEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC-CceecHHHHhhcCcEEEEecCCC----------HHHHHHHHHHHHh
Confidence             55666666778899999999999999986542 23445555556777776654321          1234458889999


Q ss_pred             CccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          290 GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       290 g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      |.+.+.+. .++++++++|++.+.++...||+++.
T Consensus       302 g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~  335 (338)
T PRK09422        302 GKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVID  335 (338)
T ss_pred             CCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEe
Confidence            99876654 58999999999999999988999885

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.4e-37  Score=274.37  Aligned_cols=319  Identities=32%  Similarity=0.508  Sum_probs=269.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++.++.+++++.+.|.+.+++|+|++.++++|++|+....+........|.++|||++|+|+.+|+++..|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR   80 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence            89999998888777888888888889999999999999999999988876653333467899999999999999999999


Q ss_pred             CCCEEEEEc-----CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHH
Q 020487           81 VGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF  155 (325)
Q Consensus        81 ~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~  155 (325)
                      +||+|+++.     ..|+|++|+.++...++++|+++++..++.++..+.+||+++.+..+++++++++|+|+++.+|++
T Consensus        81 ~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~  160 (326)
T cd08272          81 VGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHV  160 (326)
T ss_pred             CCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHH
Confidence            999999986     258899999999999999999999999999999999999998788899999999999988999999


Q ss_pred             HHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEE
Q 020487          156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF  235 (325)
Q Consensus       156 ~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v  235 (325)
                      ++++++..|++|+.++++ ++.+.++++|.+.+++.... +.+.+.+.++++++|++++|.++......++++.++|+++
T Consensus       161 ~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v  238 (326)
T cd08272         161 AVQLAKAAGARVYATASS-EKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVV  238 (326)
T ss_pred             HHHHHHHcCCEEEEEech-HHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhccCCEEE
Confidence            999999999999999987 88888888999888877666 7778888888778999999999988888899999999999


Q ss_pred             EEeccCCcccccchHHHHhhccEeeecccccc-cchhHHHHHHHHHHHHHHHHHCCccccccc-cccchhhHHHHHHHHH
Q 020487          236 IIGTQGGAKTELNITSLFAKRLTVQAAGLRSR-STENKALIVSEVEKNVWPAIAVGKVKPVIY-KYLPLCEAAEAHQLME  313 (325)
Q Consensus       236 ~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~-~~~~l~~~~~a~~~~~  313 (325)
                      .+|...    ..+......+++++.+..+... .....+......++.+.+++.++.+++.++ +.|++++++++++.+.
T Consensus       239 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~  314 (326)
T cd08272         239 SILGGA----THDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLE  314 (326)
T ss_pred             EEecCC----ccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHHHHHHHH
Confidence            998653    1222233357787777654321 111222334556677888999999887765 8999999999999998


Q ss_pred             hCCCceeEEEeC
Q 020487          314 SSQHIGKIMLVP  325 (325)
Q Consensus       314 ~~~~~gkvvi~~  325 (325)
                      +++..+|++++.
T Consensus       315 ~~~~~~~vv~~~  326 (326)
T cd08272         315 SGSARGKIVIDV  326 (326)
T ss_pred             cCCcccEEEEEC
Confidence            888888998863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=8.6e-38  Score=280.17  Aligned_cols=310  Identities=26%  Similarity=0.342  Sum_probs=248.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      ||++++..+++.  +++++.|.|+|.++||+||+.++++|++|++.+.|..+.  .+|.++|||++|+|+++|+++..++
T Consensus         8 ~~a~~~~~~~~~--~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~~--~~p~v~G~e~~G~V~~vG~~v~~~~   83 (373)
T cd08299           8 CKAAVLWEPKKP--FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVT--PFPVILGHEAAGIVESVGEGVTTVK   83 (373)
T ss_pred             eEEEEEecCCCC--cEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCCC--CCCccccccceEEEEEeCCCCccCC
Confidence            688888876654  889999999999999999999999999999999887632  3578999999999999999999999


Q ss_pred             CCCEEEEEc------------------------------------------------CCceeeeEEeecCCceeeCCCCC
Q 020487           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (325)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (325)
                      +||+|+.+.                                                ..|+|++|++++.+.++++|+++
T Consensus        84 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l  163 (373)
T cd08299          84 PGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA  163 (373)
T ss_pred             CCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence            999998751                                                24789999999999999999999


Q ss_pred             CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      ++++++.+.+++.++|.++....+++++++++|+|+ |.+|++++++++..|+ +|+++++++++++.++++|++++++.
T Consensus       164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~  242 (373)
T cd08299         164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINP  242 (373)
T ss_pred             ChHHhheeccchHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecc
Confidence            999999999999999998878889999999999976 9999999999999999 89999999999999999999988876


Q ss_pred             CCch--HHHHHHHHhCCCcccEEEeCCCh-HHHHHhhcc-ccCCCEEEEEeccCCc-ccccchHHHHhhccEeeeccccc
Q 020487          192 KTED--FVARVKEETGGKGVDVILDCMGA-SYFQRNLGS-LNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLRS  266 (325)
Q Consensus       192 ~~~~--~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~-l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~~  266 (325)
                      ....  +...+.+.++ +++|+++||+|. ..+..++.. +.++|+++.+|..... ..+++.. .+.++.++.++....
T Consensus       243 ~~~~~~~~~~v~~~~~-~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~~~~~~~  320 (373)
T cd08299         243 QDYKKPIQEVLTEMTD-GGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLTGRTWKGAVFGG  320 (373)
T ss_pred             cccchhHHHHHHHHhC-CCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhcCCeEEEEEecC
Confidence            6433  5666666666 479999999996 445555554 4679999999876432 2223332 234677888776554


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHCCc--cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          267 RSTENKALIVSEVEKNVWPAIAVGK--VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~g~--l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      .....       .+.++++.+.++.  +++.+.+.|+++++++|++.+.+++. .|+++.+
T Consensus       321 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~  373 (373)
T cd08299         321 WKSKD-------SVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF  373 (373)
T ss_pred             CccHH-------HHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            32211       1112445555554  44567899999999999999887665 4777653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=1.1e-37  Score=277.44  Aligned_cols=306  Identities=29%  Similarity=0.445  Sum_probs=255.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCC-CCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~-~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      |||+++..++   .+++++.+.|.|. ++||+|++.++++|++|+....|.++.  .+|.++|+|++|+|+++|++++.+
T Consensus         1 ~~a~~~~~~~---~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~   75 (344)
T cd08284           1 MKAVVFKGPG---DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS--TPGFVLGHEFVGEVVEVGPEVRTL   75 (344)
T ss_pred             CeeEEEecCC---CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCC--CCCcccccceEEEEEeeCCCcccc
Confidence            8999998654   3899999999985 999999999999999999988887652  236789999999999999999999


Q ss_pred             CCCCEEEEEc-------------------------------CCceeeeEEeecCC--ceeeCCCCCCHHhhccCcchHHH
Q 020487           80 KVGDQVCALL-------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACT  126 (325)
Q Consensus        80 ~~Gd~V~~~~-------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~  126 (325)
                      ++||+|++..                               .+|+|++|+.++++  .++++|++++++++++++..+++
T Consensus        76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~t  155 (344)
T cd08284          76 KVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPT  155 (344)
T ss_pred             CCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHH
Confidence            9999999753                               14889999999875  99999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhC
Q 020487          127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG  205 (325)
Q Consensus       127 a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  205 (325)
                      ||+++. ...+.++++|+|+|+ |.+|++++++|+..|+ +|++++.++++.+.++++|+. .++.+...+...+.+.++
T Consensus       156 a~~~~~-~~~~~~~~~vlI~g~-g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~~~~  232 (344)
T cd08284         156 GYFGAK-RAQVRPGDTVAVIGC-GPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAEPVERVREATE  232 (344)
T ss_pred             HHhhhH-hcCCccCCEEEEECC-cHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHHHHHHHHhC
Confidence            999984 478899999999975 9999999999999997 899998888888888899975 456666667778888887


Q ss_pred             CCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHH
Q 020487          206 GKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVW  284 (325)
Q Consensus       206 ~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  284 (325)
                      ++++|++|||++. ..+...+++++++|+++.+|..............+.+++++.+...   .       ..+.++.++
T Consensus       233 ~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~~~  302 (344)
T cd08284         233 GRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRC---P-------VRSLFPELL  302 (344)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecC---C-------cchhHHHHH
Confidence            7789999999995 4678889999999999999876543334445555667887765311   0       123455588


Q ss_pred             HHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          285 PAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       285 ~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++.++.+.+  ++.+++++++++++++.+.+++. +|+|++|
T Consensus       303 ~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~~  344 (344)
T cd08284         303 PLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLDP  344 (344)
T ss_pred             HHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEecC
Confidence            8999998875  46788999999999999988777 9999876

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.7e-37  Score=272.69  Aligned_cols=323  Identities=35%  Similarity=0.529  Sum_probs=273.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      ||++++...+.++.+++++.+.|.+.+++++|++.++++|+.|+....+..+....+|.++|||++|+|+.+|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA   80 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence            89999998777777888888888889999999999999999999988776654334467899999999999999999999


Q ss_pred             CCCEEEEEc-----CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHH
Q 020487           81 VGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF  155 (325)
Q Consensus        81 ~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~  155 (325)
                      +||+|+++.     .+|++++|+.++.+.++++|+++++.+++.++.++.++|.++.....+.++++++|+|+++.+|++
T Consensus        81 ~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~  160 (328)
T cd08268          81 VGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLA  160 (328)
T ss_pred             CCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHH
Confidence            999999885     348899999999999999999999999999999999999998788889999999999999999999


Q ss_pred             HHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEE
Q 020487          156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF  235 (325)
Q Consensus       156 ~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v  235 (325)
                      ++++++..|++++.++++.++.+.++++|.+.+++.+.......+.+.+.++++|++++|.++......+++++++|+++
T Consensus       161 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v  240 (328)
T cd08268         161 AIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLV  240 (328)
T ss_pred             HHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHhhccCCEEE
Confidence            99999999999999999998888888888888888777677777777777778999999999988888899999999999


Q ss_pred             EEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhC
Q 020487          236 IIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESS  315 (325)
Q Consensus       236 ~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~  315 (325)
                      .+|.........+....+.+++++.+..+....  ..+......++.+.+++.++.+.+.....|++++++++++.+.++
T Consensus       241 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (328)
T cd08268         241 VYGALSGEPTPFPLKAALKKSLTFRGYSLDEIT--LDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAHRYLESG  318 (328)
T ss_pred             EEEeCCCCCCCCchHHHhhcCCEEEEEeccccc--CCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHHHHHHcC
Confidence            998655432234444346788888776554322  122344556666778888888887778889999999999999988


Q ss_pred             CCceeEEEeC
Q 020487          316 QHIGKIMLVP  325 (325)
Q Consensus       316 ~~~gkvvi~~  325 (325)
                      +..+|++++|
T Consensus       319 ~~~~~vv~~~  328 (328)
T cd08268         319 QQIGKIVVTP  328 (328)
T ss_pred             CCCceEEEeC
Confidence            8888999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=1e-37  Score=276.73  Aligned_cols=318  Identities=31%  Similarity=0.404  Sum_probs=262.9

Q ss_pred             CEEEEEcCCCCCc---ceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCC
Q 020487            1 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS   77 (325)
Q Consensus         1 m~a~~~~~~~~~~---~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~   77 (325)
                      |||+++..++++.   .++.++.+.|++.++||+|++.++++|++|+....+..+. ..+|.++|||++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~v~   79 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPV-PGQPKILGWDASGVVEAVGSEVT   79 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCC-CCCCcccccceEEEEEEcCCCCC
Confidence            8999999988765   4777888888899999999999999999999988776652 23466899999999999999999


Q ss_pred             CCCCCCEEEEEc---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCC-----CCEEEEEcCC
Q 020487           78 RWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP-----GESFLVHGGS  149 (325)
Q Consensus        78 ~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~-----~~~vli~g~~  149 (325)
                      .|++||+|+.+.   .+|+|++|+.++.+.++++|+++++++++.++..+.++|.++.+...+++     +++++|+|++
T Consensus        80 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~  159 (336)
T cd08252          80 LFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGA  159 (336)
T ss_pred             CCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCC
Confidence            999999999874   46899999999999999999999999999999999999999877788887     9999999988


Q ss_pred             chHHHHHHHHHHHCC-CEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhcc
Q 020487          150 SGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGS  227 (325)
Q Consensus       150 g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~  227 (325)
                      |.+|++++++++.+| ++|++++.++++.+.++++|++++++... .+...+.. .+++++|+++||+|. ..+..++++
T Consensus       160 g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~-~~~~~~d~vl~~~~~~~~~~~~~~~  237 (336)
T cd08252         160 GGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEA-LGIEPVDYIFCLTDTDQHWDAMAEL  237 (336)
T ss_pred             chHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHh-hCCCCCCEEEEccCcHHHHHHHHHH
Confidence            999999999999999 89999999999999999999988887764 45555553 344689999999995 567888999


Q ss_pred             ccCCCEEEEEeccCCcccccchHHHHhhccEeeeccccccc--chhHHHHHHHHHHHHHHHHHCCcccccc---ccccch
Q 020487          228 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRS--TENKALIVSEVEKNVWPAIAVGKVKPVI---YKYLPL  302 (325)
Q Consensus       228 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~~~---~~~~~l  302 (325)
                      ++++|+++.+|...   ..++...+..+++++.+..+....  ...........++.+.+++.+|.+.+.+   ...+++
T Consensus       238 l~~~g~~v~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  314 (336)
T cd08252         238 IAPQGHICLIVDPQ---EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINA  314 (336)
T ss_pred             hcCCCEEEEecCCC---CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCH
Confidence            99999999998542   234445555678888776543211  1111123345667788999999988653   245899


Q ss_pred             hhHHHHHHHHHhCCCceeEEEe
Q 020487          303 CEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       303 ~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      +++++|++.+.+++..+|+++.
T Consensus       315 ~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         315 ENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             HHHHHHHHHHHcCCccceEEeC
Confidence            9999999999999888998863

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=1.3e-37  Score=276.79  Aligned_cols=306  Identities=31%  Similarity=0.456  Sum_probs=256.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++++++.   +.+++.+.|++.+++|+|++.++++|++|+..+.+.++ ...+|.++|+|++|+|+++|++++.++
T Consensus         1 ~~~~~~~~~~~---~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~~~G~V~~~G~~v~~~~   76 (343)
T cd08235           1 MKAAVLHGPND---VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIVEVGDGVTGFK   76 (343)
T ss_pred             CeEEEEecCCc---eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccceEEEEEeeCCCCCCCC
Confidence            89999987764   88899999999999999999999999999999888764 223467899999999999999999999


Q ss_pred             CCCEEEEEc---------------------------CCceeeeEEeecCCc-----eeeCCCCCCHHhhccCcchHHHHH
Q 020487           81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQ-----VLPVPSGVSLKDAAAFPEVACTVW  128 (325)
Q Consensus        81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~-----~~~~p~~~~~~~aa~l~~~~~~a~  128 (325)
                      +||+|+++.                           ..|+|++|+.++.+.     ++++|+++++.+++.+ .+..+|+
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~  155 (343)
T cd08235          77 VGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCI  155 (343)
T ss_pred             CCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHH
Confidence            999999862                           358999999999998     9999999999998766 7889999


Q ss_pred             HHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCC
Q 020487          129 STVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       129 ~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      +++. ..++++|++|+|+|+ |.+|.+++++|+..|++ |+++++++++.+.++++|.+++++++...+.+.+.+.++++
T Consensus       156 ~~l~-~~~~~~g~~VlV~g~-g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~  233 (343)
T cd08235         156 NAQR-KAGIKPGDTVLVIGA-GPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGR  233 (343)
T ss_pred             HHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHhCCc
Confidence            9984 458999999999975 99999999999999998 98898899998888889999999888888888888888878


Q ss_pred             cccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCc-ccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHH
Q 020487          208 GVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWP  285 (325)
Q Consensus       208 ~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (325)
                      ++|+++||++.. .+...+++++++|+++.+|..... ...++......+++.+.+......          +.++.+++
T Consensus       234 ~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------~~~~~~~~  303 (343)
T cd08235         234 GADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASP----------EDYKEALE  303 (343)
T ss_pred             CCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCCh----------hhHHHHHH
Confidence            899999999964 678889999999999999865432 233444455556777766432211          23444788


Q ss_pred             HHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          286 AIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       286 ~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      ++.++.+++  .+..+|++++++++++.+.+++ .+|+|+.
T Consensus       304 l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         304 LIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             HHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence            999998863  4578899999999999999988 8899873

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1e-37  Score=278.10  Aligned_cols=305  Identities=27%  Similarity=0.389  Sum_probs=251.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCC--------CCCCCCCCCCCceeEEEEEe
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--------PPKGASPYPGLECSGTILSV   72 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~--------~~~~~p~~~G~e~~G~V~~v   72 (325)
                      |||+++.+++.   +++++.+.|++.++||+||+.++++|++|++.+.|...        ....+|.++|||++|+|+++
T Consensus         1 mka~~~~~~~~---~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~v   77 (350)
T cd08256           1 MRAVVCHGPQD---YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVEL   77 (350)
T ss_pred             CeeEEEecCCc---eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEe
Confidence            89999987654   88999999999999999999999999999998887531        11134678999999999999


Q ss_pred             cCCCC--CCCCCCEEEE---------------------------Ec--CCceeeeEEeecCC-ceeeCCCCCCHHhhccC
Q 020487           73 GKNVS--RWKVGDQVCA---------------------------LL--GGGGYAEKVAVPAG-QVLPVPSGVSLKDAAAF  120 (325)
Q Consensus        73 G~~~~--~~~~Gd~V~~---------------------------~~--~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~l  120 (325)
                      |+.++  +|++||+|+.                           +.  ..|+|++|+.++++ .++++|+++++++++.+
T Consensus        78 G~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~  157 (350)
T cd08256          78 GEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI  157 (350)
T ss_pred             CCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhh
Confidence            99998  8999999987                           31  35899999999988 57899999999999888


Q ss_pred             cchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHH
Q 020487          121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR  199 (325)
Q Consensus       121 ~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  199 (325)
                       .++.++|.++ +..+++++++++|.|+ |.+|.+++++|+.+|++ ++++++++++...++++|++.+++.....+.+.
T Consensus       158 -~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  234 (350)
T cd08256         158 -EPLACALHAV-DRANIKFDDVVVLAGA-GPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEK  234 (350)
T ss_pred             -hHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHHH
Confidence             8889999998 7788999999999554 99999999999999985 677778888888888999998988877777888


Q ss_pred             HHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHH-HhhccEeeecccccccchhHHHHHH
Q 020487          200 VKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL-FAKRLTVQAAGLRSRSTENKALIVS  277 (325)
Q Consensus       200 ~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~  277 (325)
                      +.+.+++.++|+++||+|. ..+..++++++++|+++.+|.... ...++...+ ..+++++.++.....          
T Consensus       235 ~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~----------  303 (350)
T cd08256         235 IKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGD-PVTVDWSIIGDRKELDVLGSHLGPY----------  303 (350)
T ss_pred             HHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCC-CCccChhHhhcccccEEEEeccCch----------
Confidence            8888887889999999995 467788999999999999986543 222333333 245677776543321          


Q ss_pred             HHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487          278 EVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIML  323 (325)
Q Consensus       278 ~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  323 (325)
                       .++++.+++.+|.+.+  .+.+.|+++++++|++.+++++..+|+++
T Consensus       304 -~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         304 -CYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             -hHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence             2344788899999876  36899999999999999999888888874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.1e-37  Score=276.01  Aligned_cols=305  Identities=34%  Similarity=0.481  Sum_probs=255.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..+++  .+.+++.|.|.+.++||+|++.++++|++|++...|..+.. ..|.++|+|++|+|+.+|++++.++
T Consensus         1 m~a~~~~~~~~--~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~v~~~G~~v~~~~   77 (332)
T cd08259           1 MKAAILHKPNK--PLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRG-KYPLILGHEIVGTVEEVGEGVERFK   77 (332)
T ss_pred             CeEEEEecCCC--ceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCC-CCCeeccccceEEEEEECCCCccCC
Confidence            89999987433  48889999999999999999999999999999998876542 3467899999999999999999999


Q ss_pred             CCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487           81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (325)
Q Consensus        81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~  133 (325)
                      +||+|+++.                           ..|+|++|+.++...++++|+++++++++.++.++.+||+++..
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~  157 (332)
T cd08259          78 PGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR  157 (332)
T ss_pred             CCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH
Confidence            999999874                           15899999999999999999999999999999999999999866


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                       ..++++++++|+|++|.+|++++++++..|++|+++++++++.+.+++++.+.+++...  +.+.+.+..   ++|+++
T Consensus       158 -~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~d~v~  231 (332)
T cd08259         158 -AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK--FSEDVKKLG---GADVVI  231 (332)
T ss_pred             -hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH--HHHHHHhcc---CCCEEE
Confidence             88999999999999999999999999999999999999988888888888877775443  444554433   699999


Q ss_pred             eCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccc
Q 020487          214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK  293 (325)
Q Consensus       214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  293 (325)
                      +|+|......++++++++|+++.+|................+++.+.+....          ..+.++.+.+++.+|.+.
T Consensus       232 ~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~  301 (332)
T cd08259         232 ELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISA----------TKADVEEALKLVKEGKIK  301 (332)
T ss_pred             ECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCC----------CHHHHHHHHHHHHcCCCc
Confidence            9999988888899999999999998755432223333344466666654211          123345588889999998


Q ss_pred             cccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          294 PVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       294 ~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      +.+.++|+++++++|++.+.+++..+|++++
T Consensus       302 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         302 PVIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             cceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            8788999999999999999998888998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=2.8e-37  Score=272.58  Aligned_cols=315  Identities=20%  Similarity=0.301  Sum_probs=257.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..+|+++.+++++.+.|+|.++||+|++.++++|++|+....|..+....+|.++|||++|+|++  ++++.++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~   78 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK   78 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence            99999999887777999999999999999999999999999999988887643334577889999999998  7777899


Q ss_pred             CCCEEEEEc------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH--hhcCCC-CCCEEEEEcCCch
Q 020487           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF--MTSHLS-PGESFLVHGGSSG  151 (325)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~--~~~~~~-~~~~vli~g~~g~  151 (325)
                      +||+|+.+.      ..|+|++|+.++.+.++++|+++++++++.++..+++++.++.  ...... ++++++|+|++|.
T Consensus        79 ~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~  158 (324)
T cd08288          79 PGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGG  158 (324)
T ss_pred             CCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcH
Confidence            999999864      2589999999999999999999999999999999999987763  123445 5789999999999


Q ss_pred             HHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCC
Q 020487          152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID  231 (325)
Q Consensus       152 ~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~  231 (325)
                      +|.+++++|+.+|++|++++.++++.+.++++|++++++......  .+.....+ ++|.++|++++..+...+..++.+
T Consensus       159 vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~  235 (324)
T cd08288         159 VGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELSE--PGRPLQKE-RWAGAVDTVGGHTLANVLAQTRYG  235 (324)
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhH--hhhhhccC-cccEEEECCcHHHHHHHHHHhcCC
Confidence            999999999999999999999999999999999999888765332  34444433 589999999987677778889999


Q ss_pred             CEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHH
Q 020487          232 GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL  311 (325)
Q Consensus       232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~  311 (325)
                      |+++.+|.........+...++.+++++.+........    ....+.++.+.+++.++.+.+ +.+.++++++++|++.
T Consensus       236 g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~a~~~  310 (324)
T cd08288         236 GAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPI----ERRRAAWARLARDLDPALLEA-LTREIPLADVPDAAEA  310 (324)
T ss_pred             CEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccc----hhhHHHHHHHHHHHhcCCccc-cceeecHHHHHHHHHH
Confidence            99999987643222344455556888888875432221    123445566778888888865 4689999999999999


Q ss_pred             HHhCCCceeEEEeC
Q 020487          312 MESSQHIGKIMLVP  325 (325)
Q Consensus       312 ~~~~~~~gkvvi~~  325 (325)
                      +++++..+|+++++
T Consensus       311 ~~~~~~~~~vvv~~  324 (324)
T cd08288         311 ILAGQVRGRVVVDV  324 (324)
T ss_pred             HhcCCccCeEEEeC
Confidence            99999999999864

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=7.2e-38  Score=277.62  Aligned_cols=301  Identities=25%  Similarity=0.350  Sum_probs=252.8

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (325)
Q Consensus         2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (325)
                      |+++...++  +.+++++.+.|+|.++||+||+.++++|++|++.+.|.... ..+|.++|||++|+|+++|++++.|++
T Consensus         1 ~~~~~~~~~--~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~   77 (337)
T cd05283           1 KGYAARDAS--GKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGP-TKYPLVPGHEIVGIVVAVGSKVTKFKV   77 (337)
T ss_pred             CceEEecCC--CCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCC-CCCCcccCcceeeEEEEECCCCcccCC
Confidence            467777766  44999999999999999999999999999999999887643 335789999999999999999999999


Q ss_pred             CCEEEEE-----------------------------------cCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHH
Q 020487           82 GDQVCAL-----------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT  126 (325)
Q Consensus        82 Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~  126 (325)
                      ||+|+..                                   ...|+|++|+.++.+.++++|+++++++++.+.+.+.+
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t  157 (337)
T cd05283          78 GDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGIT  157 (337)
T ss_pred             CCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHH
Confidence            9999731                                   23588999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCC
Q 020487          127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       127 a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  206 (325)
                      ||.++.. ..++++++++|.|+ |.+|++++++++..|++|+++++++++.+.++++|++.+++.....+..    .. +
T Consensus       158 a~~~~~~-~~~~~g~~vlV~g~-g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~----~~-~  230 (337)
T cd05283         158 VYSPLKR-NGVGPGKRVGVVGI-GGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMK----KA-A  230 (337)
T ss_pred             HHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhh----hc-c
Confidence            9999844 46899999999875 9999999999999999999999999999999999998888766543322    12 3


Q ss_pred             CcccEEEeCCChHH-HHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHH
Q 020487          207 KGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWP  285 (325)
Q Consensus       207 ~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (325)
                      +++|++++|+|... +..++++++++|+++.+|...... .++...++.+++++.+......          +.++.+++
T Consensus       231 ~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~  299 (337)
T cd05283         231 GSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPL-PVPPFPLIFGRKSVAGSLIGGR----------KETQEMLD  299 (337)
T ss_pred             CCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCC-ccCHHHHhcCceEEEEecccCH----------HHHHHHHH
Confidence            57999999999874 788899999999999998765432 4566666778999988765421          23444778


Q ss_pred             HHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          286 AIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       286 ~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      ++.+|++.+.+ +.|+++++++|++.+++++..||+|++
T Consensus       300 ~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         300 FAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             HHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            88899987765 789999999999999999999998874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.7e-37  Score=277.83  Aligned_cols=307  Identities=25%  Similarity=0.367  Sum_probs=254.6

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (325)
Q Consensus         2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (325)
                      ||+++.+.+.+  +++++.+.|++.++||+|++.++++|++|++.+.+..+.  .+|.++|||++|+|+++|++++.+++
T Consensus         2 ~a~~~~~~~~~--~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~--~~~~i~g~e~~G~V~~vG~~v~~~~~   77 (365)
T cd05279           2 KAAVLWEKGKP--LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPT--PLPVILGHEGAGIVESIGPGVTTLKP   77 (365)
T ss_pred             ceeEEecCCCC--cEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCC--CCCcccccceeEEEEEeCCCcccCCC
Confidence            67888876654  889999999999999999999999999999998887653  34678999999999999999999999


Q ss_pred             CCEEEEEcC------------------------------------------------CceeeeEEeecCCceeeCCCCCC
Q 020487           82 GDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVLPVPSGVS  113 (325)
Q Consensus        82 Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~~  113 (325)
                      ||+|+....                                                .|+|++|+.++++.++++|++++
T Consensus        78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~  157 (365)
T cd05279          78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAP  157 (365)
T ss_pred             CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCC
Confidence            999987621                                                26899999999999999999999


Q ss_pred             HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCC
Q 020487          114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYK  192 (325)
Q Consensus       114 ~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~  192 (325)
                      +++++.+..++.++|.++.+.+++++|++++|+|+ |.+|++++++|+..|++ |+++++++++.+.++++|++++++..
T Consensus       158 ~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~  236 (365)
T cd05279         158 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPR  236 (365)
T ss_pred             HHHhhHhccchhHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccc
Confidence            99999999999999999888889999999999975 99999999999999995 67777799999999999999888776


Q ss_pred             Cc--hHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhcccc-CCCEEEEEeccC-CcccccchHHHHhhccEeeecccccc
Q 020487          193 TE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLN-IDGRLFIIGTQG-GAKTELNITSLFAKRLTVQAAGLRSR  267 (325)
Q Consensus       193 ~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~-~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~  267 (325)
                      ..  .+.+.+.+.++ +++|+++|++|. ..+..++++++ ++|+++.+|... .....++...+ .++.++.|......
T Consensus       237 ~~~~~~~~~l~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~  314 (365)
T cd05279         237 DQDKPIVEVLTEMTD-GGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGW  314 (365)
T ss_pred             cccchHHHHHHHHhC-CCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCC
Confidence            65  66677777775 689999999985 56788899999 999999998753 22344555565 56777777655433


Q ss_pred             cchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487          268 STENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIML  323 (325)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  323 (325)
                      ..       .+.++.+++++.++.+.+  ++.++|+++++++|++.+++++.. |+++
T Consensus       315 ~~-------~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~  364 (365)
T cd05279         315 KS-------KDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL  364 (365)
T ss_pred             ch-------HhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence            22       123444788889998765  468999999999999999876654 6554

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=3.9e-37  Score=273.77  Aligned_cols=309  Identities=32%  Similarity=0.486  Sum_probs=256.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||++++..+.   +.+++.+.|+++++||+|++.++++|++|+....+..+.  ..|.++|+|++|+|+++|+++..|+
T Consensus         1 ~~a~~~~~~~~---l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~~--~~~~~~g~~~~G~V~~~g~~v~~~~   75 (343)
T cd08236           1 MKALVLTGPGD---LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAY--HPPLVLGHEFSGTVEEVGSGVDDLA   75 (343)
T ss_pred             CeeEEEecCCc---eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCCC--CCCcccCcceEEEEEEECCCCCcCC
Confidence            89999998753   888999999999999999999999999999988776522  2367899999999999999999999


Q ss_pred             CCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487           81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (325)
Q Consensus        81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~  133 (325)
                      +||+|+++.                           ..|+|++|+.++.+.++++|+++++++++++ ..+.+||.++. 
T Consensus        76 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-  153 (343)
T cd08236          76 VGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-  153 (343)
T ss_pred             CCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-
Confidence            999999862                           3589999999999999999999999999877 67789999984 


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      ...++++++++|+|+ |.+|.+++++|+.+|++ |+++++++++.+.++++|++.+++.+... .+.+....+++++|++
T Consensus       154 ~~~~~~~~~vlI~g~-g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~~~~~d~v  231 (343)
T cd08236         154 LAGITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED-VEKVRELTEGRGADLV  231 (343)
T ss_pred             hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcccc-HHHHHHHhCCCCCCEE
Confidence            778999999999975 99999999999999997 99999899888888889998888877766 7777778887789999


Q ss_pred             EeCCCh-HHHHHhhccccCCCEEEEEeccCCcc--cccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHC
Q 020487          213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV  289 (325)
Q Consensus       213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (325)
                      +||.|. ..+..++++|+++|+++.+|......  ...+...++.+++++.++.......     ...+.++.+.+++.+
T Consensus       232 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  306 (343)
T cd08236         232 IEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAP-----FPGDEWRTALDLLAS  306 (343)
T ss_pred             EECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccc-----cchhhHHHHHHHHHc
Confidence            999976 45688899999999999998654321  1223444567788888876533211     123345557888999


Q ss_pred             Cccc--cccccccchhhHHHHHHHHHh-CCCceeEEE
Q 020487          290 GKVK--PVIYKYLPLCEAAEAHQLMES-SQHIGKIML  323 (325)
Q Consensus       290 g~l~--~~~~~~~~l~~~~~a~~~~~~-~~~~gkvvi  323 (325)
                      +.+.  +.+...+++++++++++.+.+ ....+|+|+
T Consensus       307 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         307 GKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             CCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            9875  446789999999999999998 666788774

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=3.4e-37  Score=276.85  Aligned_cols=305  Identities=26%  Similarity=0.419  Sum_probs=250.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~-~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      ||++++..++   .+++++.+.|.+ +++||+||+.++++|++|++...|.++.  .+|.++|||++|+|+++|+++..+
T Consensus         1 m~~~~~~~~~---~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~--~~p~~~g~e~~G~V~~vG~~v~~~   75 (375)
T cd08282           1 MKAVVYGGPG---NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGA--EPGLVLGHEAMGEVEEVGSAVESL   75 (375)
T ss_pred             CceEEEecCC---ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCC--CCCceeccccEEEEEEeCCCCCcC
Confidence            8999997665   388999999996 7999999999999999999999887762  347899999999999999999999


Q ss_pred             CCCCEEEE-------Ec------------------------------CCceeeeEEeecCC--ceeeCCCCCCHH---hh
Q 020487           80 KVGDQVCA-------LL------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLK---DA  117 (325)
Q Consensus        80 ~~Gd~V~~-------~~------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~---~a  117 (325)
                      ++||+|+.       .|                              .+|+|++|+.++.+  .++++|++++++   .+
T Consensus        76 ~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~  155 (375)
T cd08282          76 KVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDY  155 (375)
T ss_pred             CCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhhe
Confidence            99999986       22                              13889999999975  899999999998   56


Q ss_pred             ccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchH
Q 020487          118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDF  196 (325)
Q Consensus       118 a~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  196 (325)
                      +.+...+.++|.++ ..+++++|++|+|.|+ |.+|++++|+++..|+ +|+++++++++.+.++++|+. .++.+...+
T Consensus       156 a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~  232 (375)
T cd08282         156 LMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFSDGDP  232 (375)
T ss_pred             eeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccCcccH
Confidence            77888999999998 7888999999999876 9999999999999998 799988899999999999984 566666667


Q ss_pred             HHHHHHHhCCCcccEEEeCCChHH------------HHHhhccccCCCEEEEEeccCCcc------------cccchHHH
Q 020487          197 VARVKEETGGKGVDVILDCMGASY------------FQRNLGSLNIDGRLFIIGTQGGAK------------TELNITSL  252 (325)
Q Consensus       197 ~~~~~~~~~~~~~d~vi~~~g~~~------------~~~~~~~l~~~g~~v~~g~~~~~~------------~~~~~~~~  252 (325)
                      .+.+.+.++ +++|+++||+|...            +..++++++++|+++.+|......            ..++...+
T Consensus       233 ~~~i~~~~~-~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (375)
T cd08282         233 VEQILGLEP-GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLL  311 (375)
T ss_pred             HHHHHHhhC-CCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHH
Confidence            777777776 57999999998763            678899999999999887644211            12344445


Q ss_pred             HhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          253 FAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       253 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +.++..+.+....          ..+.++.+++++.++++.+  .+.+.|+++++++|++.+.+++ .+|+|+.|
T Consensus       312 ~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~  375 (375)
T cd08282         312 WAKGLSFGTGQAP----------VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP  375 (375)
T ss_pred             HhcCcEEEEecCC----------chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            5555555543211          1223444788899999876  3789999999999999999888 88999875

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=7.7e-37  Score=271.56  Aligned_cols=308  Identities=28%  Similarity=0.366  Sum_probs=248.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCC-C-CCCCCCCCCCCceeEEEEEecCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY-P-PPKGASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~-~-~~~~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      ||++++..+++  .+++.+.|.|+|+++||+||+.++++|++|++++.+.. . ....+|.++|||++|+|+++|++++.
T Consensus         1 ~~~~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~   78 (341)
T PRK05396          1 MKALVKLKAEP--GLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTG   78 (341)
T ss_pred             CceEEEecCCC--ceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCc
Confidence            89999987663  49999999999999999999999999999999776532 1 12234678999999999999999999


Q ss_pred             CCCCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHH
Q 020487           79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (325)
Q Consensus        79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l  131 (325)
                      +++||+|++..                           .+|+|++|+.++.+.++++|+++++.+++.+ .++.+++.++
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~  157 (341)
T PRK05396         79 FKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTA  157 (341)
T ss_pred             CCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHHH
Confidence            99999998752                           3589999999999999999999999888754 4555555554


Q ss_pred             HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487          132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      ..  ...+|++++|.|+ |.+|++++++|+.+|+ +|+++..++++.+.++++|++.+++.+...+.+.+.+.+.++++|
T Consensus       158 ~~--~~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d  234 (341)
T PRK05396        158 LS--FDLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFD  234 (341)
T ss_pred             Hc--CCCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCCC
Confidence            32  3468999999875 9999999999999999 688888888888889999999999888777888888888778899


Q ss_pred             EEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHC
Q 020487          211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV  289 (325)
Q Consensus       211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (325)
                      ++|||.|. ..+..++++++++|+++.+|.... ...++...+..+++.+.++......         +.+..+.+++.+
T Consensus       235 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~  304 (341)
T PRK05396        235 VGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPG-DMAIDWNKVIFKGLTIKGIYGREMF---------ETWYKMSALLQS  304 (341)
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-CCcccHHHHhhcceEEEEEEccCcc---------chHHHHHHHHHc
Confidence            99999886 456888999999999999987553 2234455666677777765421110         122236678888


Q ss_pred             C-ccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          290 G-KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       290 g-~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      + ++.+.+.+.++++++++|++.+.+++ .||+++++
T Consensus       305 ~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~  340 (341)
T PRK05396        305 GLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDW  340 (341)
T ss_pred             CCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEec
Confidence            8 45566779999999999999998876 79999864

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7e-37  Score=271.90  Aligned_cols=306  Identities=28%  Similarity=0.382  Sum_probs=246.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCC----------CCCCCCCCCCCceeEEEE
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP----------PPKGASPYPGLECSGTIL   70 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~----------~~~~~p~~~G~e~~G~V~   70 (325)
                      |||+++...    .+++++.+.|+++++||+|++.++++|++|+....|...          ....+|.++|+|++|+|+
T Consensus         1 m~a~~~~~~----~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~   76 (341)
T cd08262           1 MRAAVFRDG----PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVV   76 (341)
T ss_pred             CceEEEeCC----ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEE
Confidence            899998764    399999999999999999999999999999999887321          122346789999999999


Q ss_pred             EecCCCCC-CCCCCEEEEEc-----------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487           71 SVGKNVSR-WKVGDQVCALL-----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (325)
Q Consensus        71 ~vG~~~~~-~~~Gd~V~~~~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~  132 (325)
                      ++|++++. |++||+|++++                 ..|+|++|+.++.+.++++|+++++++++ ++.++.+||+++ 
T Consensus        77 ~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-  154 (341)
T cd08262          77 DYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV-  154 (341)
T ss_pred             EeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH-
Confidence            99999987 99999999872                 35899999999999999999999998876 677888999985 


Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHH---HHHHHhCCCc
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVA---RVKEETGGKG  208 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~  208 (325)
                      ..++++++++|+|+|+ |.+|.+++|+|+.+|++ +++++.++++.+.++++|++++++.+......   .+.+..++++
T Consensus       155 ~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~  233 (341)
T cd08262         155 RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPK  233 (341)
T ss_pred             HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCCC
Confidence            7888999999999986 99999999999999996 66677788888888899998888866542211   3445566678


Q ss_pred             ccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHH
Q 020487          209 VDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI  287 (325)
Q Consensus       209 ~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (325)
                      +|+++||+|.. .+...+++++++|+++.+|...... .........+++.+.+.....      .    +.++.+.+++
T Consensus       234 ~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~l~  302 (341)
T cd08262         234 PAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESD-NIEPALAIRKELTLQFSLGYT------P----EEFADALDAL  302 (341)
T ss_pred             CCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCC-ccCHHHHhhcceEEEEEeccc------H----HHHHHHHHHH
Confidence            99999999974 6678899999999999998764321 223223344666666432211      1    1334478889


Q ss_pred             HCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          288 AVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       288 ~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      .+|.+.+  .+.+.+++++++++++.+.+++..+|+|++
T Consensus       303 ~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         303 AEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             HcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            9998875  447899999999999999999988999875

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=4e-37  Score=251.81  Aligned_cols=301  Identities=23%  Similarity=0.291  Sum_probs=250.9

Q ss_pred             CcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCC--CCCCCCCCceeEEEEEec--CCCCCCCCCCEEEE
Q 020487           12 PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPK--GASPYPGLECSGTILSVG--KNVSRWKVGDQVCA   87 (325)
Q Consensus        12 ~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~vG--~~~~~~~~Gd~V~~   87 (325)
                      ++.+++++.+.|+|+++|||+|+.|.|+.|.-    +|.....+  ..|.-+|...+|.++...  |+...|++||.|++
T Consensus        24 ~d~F~lee~~vp~p~~GqvLl~~~ylS~DPym----Rgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~   99 (340)
T COG2130          24 PDDFRLEEVDVPEPGEGQVLLRTLYLSLDPYM----RGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVG   99 (340)
T ss_pred             CCCceeEeccCCCCCcCceEEEEEEeccCHHH----eecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEe
Confidence            36699999999999999999999999999833    23332222  225567777765444433  56788999999999


Q ss_pred             EcCCceeeeEEeecCCceeeCCCCCC--HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC
Q 020487           88 LLGGGGYAEKVAVPAGQVLPVPSGVS--LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV  165 (325)
Q Consensus        88 ~~~~g~~~~~~~~~~~~~~~~p~~~~--~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~  165 (325)
                      .   .+|++|..++.+.+.+++...-  ......|.++..|||.+|.+..+.++|++++|.+|+|++|..+.|+|+..|+
T Consensus       100 ~---~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~  176 (340)
T COG2130         100 V---SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC  176 (340)
T ss_pred             c---ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC
Confidence            9   5799999999999999964321  1233468999999999999999999999999999999999999999999999


Q ss_pred             EEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcc
Q 020487          166 RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAK  244 (325)
Q Consensus       166 ~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~  244 (325)
                      +|+.++-++++...+++ +|++.++|++.+++.+.+.+.+. +++|+.||++|++.+...+..|+..+|++.||.....+
T Consensus       177 rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P-~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~YN  255 (340)
T COG2130         177 RVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACP-KGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYN  255 (340)
T ss_pred             eEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCC-CCeEEEEEcCCchHHHHHHHhhccccceeeeeehhhcC
Confidence            99999999999999986 99999999999999999999998 58999999999999999999999999999999876532


Q ss_pred             cc------cchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCc
Q 020487          245 TE------LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHI  318 (325)
Q Consensus       245 ~~------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~  318 (325)
                      .+      .....++.+++++.|+-.....    .....+..+++..|+++|+++...+.+-.|+.+++||..|.++++.
T Consensus       256 ~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~----~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N~  331 (340)
T COG2130         256 APELPPGPRRLPLLMAKRLRVQGFIVASDY----DQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNF  331 (340)
T ss_pred             CCCCCCCcchhhHHHhhhheeEEEEechhh----hhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCcc
Confidence            11      2244566788999998764332    2234456666999999999998888888899999999999999999


Q ss_pred             eeEEEe
Q 020487          319 GKIMLV  324 (325)
Q Consensus       319 gkvvi~  324 (325)
                      ||.|++
T Consensus       332 GK~vvK  337 (340)
T COG2130         332 GKLVVK  337 (340)
T ss_pred             ceEEEE
Confidence            999986

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.3e-36  Score=269.12  Aligned_cols=315  Identities=31%  Similarity=0.500  Sum_probs=255.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      .||+++...+.++.+++++.+.|.|.++||+|++.++++|++|+..+.+..+....+|.++|||++|+|+.+|+++..|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (331)
T cd08273           1 NREVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFE   80 (331)
T ss_pred             CeeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCC
Confidence            37899998888888999999999999999999999999999999998887654334577899999999999999999999


Q ss_pred             CCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG  160 (325)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a  160 (325)
                      +||+|+++...|+|++|+.++.+.++++|+++++.+++.++.++.++|.++.....+.++++++|+|++|.+|+++++++
T Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a  160 (331)
T cd08273          81 VGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELA  160 (331)
T ss_pred             CCCEEEEeCCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHH
Confidence            99999999766899999999999999999999999999999999999999877788999999999999999999999999


Q ss_pred             HHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEecc
Q 020487          161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      +..|++|+.++. +++.+.++++|+.. ++.....+...  +.. ++++|++++|+++......+++++++|+++.+|..
T Consensus       161 ~~~g~~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~~~~~--~~~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~  235 (331)
T cd08273         161 LLAGAEVYGTAS-ERNHAALRELGATP-IDYRTKDWLPA--MLT-PGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGN  235 (331)
T ss_pred             HHcCCEEEEEeC-HHHHHHHHHcCCeE-EcCCCcchhhh--hcc-CCCceEEEECCchHHHHHHHHHhcCCCEEEEEccC
Confidence            999999999997 88888888888654 44444343333  222 35799999999998888889999999999999876


Q ss_pred             CCccc-ccch--H------------HHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhH
Q 020487          241 GGAKT-ELNI--T------------SLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEA  305 (325)
Q Consensus       241 ~~~~~-~~~~--~------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~  305 (325)
                      ..... ....  .            ....++++......  . ....+....+.++.+++++.+|.+.+.+.+.++++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  312 (331)
T cd08273         236 SSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWR--D-RAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEV  312 (331)
T ss_pred             CCCCCccccccchhhhhhhhhhhcceeccceeEEEeech--h-cccCHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHH
Confidence            53211 1111  0            01112333333222  1 1112223455677788999999998877889999999


Q ss_pred             HHHHHHHHhCCCceeEEE
Q 020487          306 AEAHQLMESSQHIGKIML  323 (325)
Q Consensus       306 ~~a~~~~~~~~~~gkvvi  323 (325)
                      +++++.+.+++..||+|+
T Consensus       313 ~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         313 AEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             HHHHHHHHcCCCcceEEe
Confidence            999999998888889876

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.6e-36  Score=264.76  Aligned_cols=319  Identities=33%  Similarity=0.542  Sum_probs=262.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..+++.+++++++.+.|++.+++|+|++.++++|++|+..+.+..... .+|.++|||++|+|+.+|+++..++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~~   79 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW-SYPHVPGVDGAGVVVAVGAKVTGWK   79 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCcccccceEEEEEEeCCCCCcCC
Confidence            899999988853459999999999999999999999999999999887765321 1256789999999999999999999


Q ss_pred             CCCEEEEEc---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHH
Q 020487           81 VGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAI  157 (325)
Q Consensus        81 ~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~  157 (325)
                      +||+|+++.   ..|+|++|+.++.+.++++|+++++.+++.+...+.+++.++.....+++|++++|+|+++.+|++++
T Consensus        80 ~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~  159 (325)
T cd08271          80 VGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAV  159 (325)
T ss_pred             CCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHH
Confidence            999999985   35899999999999999999999999999999999999999988888999999999999899999999


Q ss_pred             HHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEE
Q 020487          158 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       158 ~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~  237 (325)
                      ++++..|++|+++. ++++.+.++++|++.+++.....+...+.+..+++++|++++|+++......+++++++|+++.+
T Consensus       160 ~~a~~~g~~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~  238 (325)
T cd08271         160 QLAKRAGLRVITTC-SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCI  238 (325)
T ss_pred             HHHHHcCCEEEEEE-cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhccCCEEEEE
Confidence            99999999999887 66777888889998888877766777778777777899999999988777789999999999998


Q ss_pred             eccCCcccccchHHHHhhccEeeecccccccchh---HHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHh
Q 020487          238 GTQGGAKTELNITSLFAKRLTVQAAGLRSRSTEN---KALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMES  314 (325)
Q Consensus       238 g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~  314 (325)
                      +......   ... .+.+++.+....+.......   ......+.+.++++++.++.+.+.....|+++++.++++.+.+
T Consensus       239 ~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~  314 (325)
T cd08271         239 QGRPDAS---PDP-PFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRALKD  314 (325)
T ss_pred             cCCCCCc---chh-HHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHHHHHc
Confidence            7543221   111 12334444333222211000   1123455667788999999988777788999999999999998


Q ss_pred             CCCceeEEEeC
Q 020487          315 SQHIGKIMLVP  325 (325)
Q Consensus       315 ~~~~gkvvi~~  325 (325)
                      +...+|+++++
T Consensus       315 ~~~~~kiv~~~  325 (325)
T cd08271         315 RHTRGKIVVTI  325 (325)
T ss_pred             CCccceEEEEC
Confidence            88889999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=2.3e-36  Score=267.83  Aligned_cols=302  Identities=31%  Similarity=0.458  Sum_probs=250.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++.   +++++.+.|+++++||+||+.++++|+.|+....|.++..  +|.++|+|++|+|+.+|++++.++
T Consensus         1 ~~a~~~~~~~~---~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~--~p~~~g~~~~G~v~~vG~~v~~~~   75 (334)
T cd08234           1 MKALVYEGPGE---LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAA--PPLVPGHEFAGVVVAVGSKVTGFK   75 (334)
T ss_pred             CeeEEecCCCc---eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCCC--CCcccccceEEEEEEeCCCCCCCC
Confidence            89999987663   8899999999999999999999999999999998877643  577899999999999999999999


Q ss_pred             CCCEEEEE---------------------------cCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487           81 VGDQVCAL---------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (325)
Q Consensus        81 ~Gd~V~~~---------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~  133 (325)
                      +||+|+..                           ...|+|++|+.++.+.++++|+++++.+++.+ ..+.++++++ .
T Consensus        76 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~  153 (334)
T cd08234          76 VGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-D  153 (334)
T ss_pred             CCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-H
Confidence            99999871                           13588999999999999999999999988766 7778899888 7


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      .++++++++++|+|+ |.+|.+++++|+..|++ |+++++++++.+.++++|.+.+++.+...+...  ..+.++++|++
T Consensus       154 ~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~vd~v  230 (334)
T cd08234         154 LLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQ--KEDNPYGFDVV  230 (334)
T ss_pred             hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHH--HHhcCCCCcEE
Confidence            889999999999985 99999999999999997 888999999999888899888887776655444  44556689999


Q ss_pred             EeCCCh-HHHHHhhccccCCCEEEEEeccCC-cccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCC
Q 020487          213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG  290 (325)
Q Consensus       213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  290 (325)
                      +||++. ......+++++++|+++.+|.... ....++...+..+++++.+....           .+.++.+.+++.++
T Consensus       231 ~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~  299 (334)
T cd08234         231 IEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN-----------PYTFPRAIALLESG  299 (334)
T ss_pred             EECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC-----------HHHHHHHHHHHHcC
Confidence            999974 556788999999999999986543 22334444445567777765421           12345588889999


Q ss_pred             cccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          291 KVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       291 ~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      ++.+  .+..++++++++++++.+.+ ...+|+|+.
T Consensus       300 ~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi~  334 (334)
T cd08234         300 KIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVVV  334 (334)
T ss_pred             CCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEeC
Confidence            8864  35788999999999999998 778898863

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1e-36  Score=268.34  Aligned_cols=288  Identities=24%  Similarity=0.351  Sum_probs=237.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++   .+++++.+.|++.++||+||+.++++|++|.....|.++    .|.++|+|++|+|+++|++   ++
T Consensus         1 ~~a~~~~~~~---~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~----~~~~~G~e~~G~Vv~~G~~---~~   70 (319)
T cd08242           1 MKALVLDGGL---DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP----FPGVPGHEFVGIVEEGPEA---EL   70 (319)
T ss_pred             CeeEEEeCCC---cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC----CCCccCceEEEEEEEeCCC---CC
Confidence            8999998754   399999999999999999999999999999999988765    3678999999999999998   67


Q ss_pred             CCCEEEE---------------------------E-cCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487           81 VGDQVCA---------------------------L-LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (325)
Q Consensus        81 ~Gd~V~~---------------------------~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~  132 (325)
                      +||+|..                           + ..+|+|++|+.++.+.++++|++++.++++.+ .+..++|.++ 
T Consensus        71 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~-  148 (319)
T cd08242          71 VGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEIL-  148 (319)
T ss_pred             CCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHHH-
Confidence            9999963                           1 12589999999999999999999999888754 4455666554 


Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      +..+++++++++|+|+ |.+|.+++|+|+.+|++|++++.++++.+.++++|++.+++....         +.++++|++
T Consensus       149 ~~~~~~~g~~vlV~g~-g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---------~~~~~~d~v  218 (319)
T cd08242         149 EQVPITPGDKVAVLGD-GKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAE---------SEGGGFDVV  218 (319)
T ss_pred             HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcccc---------ccCCCCCEE
Confidence            7788999999999984 999999999999999999999999999999999999887765331         345689999


Q ss_pred             EeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCc
Q 020487          213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                      +||+|. ..+..++++++++|+++..+.... ...++...+..++.++.+.....             ++.+++++.++.
T Consensus       219 id~~g~~~~~~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~-------------~~~~~~~~~~~~  284 (319)
T cd08242         219 VEATGSPSGLELALRLVRPRGTVVLKSTYAG-PASFDLTKAVVNEITLVGSRCGP-------------FAPALRLLRKGL  284 (319)
T ss_pred             EECCCChHHHHHHHHHhhcCCEEEEEcccCC-CCccCHHHheecceEEEEEeccc-------------HHHHHHHHHcCC
Confidence            999987 456888899999999998765432 33455556667788887764322             233778899999


Q ss_pred             c--ccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          292 V--KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       292 l--~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +  .+.+.+.|+++++++|++.+.++. .+|+|++|
T Consensus       285 l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~  319 (319)
T cd08242         285 VDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP  319 (319)
T ss_pred             CChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            8  456789999999999999998766 48999987

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=2e-36  Score=269.46  Aligned_cols=306  Identities=30%  Similarity=0.489  Sum_probs=250.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~-~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      ||+++++.++.   +++++.+.|.| +++||+||+.++++|++|+..+.|.++.  ..|.++|||++|+|+++|+++..+
T Consensus         1 m~~~~~~~~~~---~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~   75 (345)
T cd08287           1 MRATVIHGPGD---IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT--RAPAPIGHEFVGVVEEVGSEVTSV   75 (345)
T ss_pred             CceeEEecCCc---eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC--CCCcccccceEEEEEEeCCCCCcc
Confidence            89999986554   88999999996 8999999999999999999988887653  346789999999999999999999


Q ss_pred             CCCCEEEE-Ec--------------------------CCceeeeEEeecCC--ceeeCCCCCCHHhhc-----cCcchHH
Q 020487           80 KVGDQVCA-LL--------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAA-----AFPEVAC  125 (325)
Q Consensus        80 ~~Gd~V~~-~~--------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa-----~l~~~~~  125 (325)
                      ++||+|+. +.                          .+|+|++|+.++.+  .++++|++++++.+.     ++...+.
T Consensus        76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~  155 (345)
T cd08287          76 KPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMG  155 (345)
T ss_pred             CCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHH
Confidence            99999987 21                          12889999999875  899999999873221     2335688


Q ss_pred             HHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHh
Q 020487          126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET  204 (325)
Q Consensus       126 ~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  204 (325)
                      +|+.++ ....++++++++|.| +|.+|++++++|+..|++ ++++.+++++.+.++++|++.++++....+.+.+.+.+
T Consensus       156 ~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~~~~  233 (345)
T cd08287         156 TGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVRELT  233 (345)
T ss_pred             HHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHHHhc
Confidence            899887 467889999999987 599999999999999995 78888888888888999999999988877888888888


Q ss_pred             CCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHH
Q 020487          205 GGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV  283 (325)
Q Consensus       205 ~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  283 (325)
                      ++.++|+++||+|+ ..+..++++++++|+++.+|.... ...++....+.+++++.+....          ..+.++.+
T Consensus       234 ~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~  302 (345)
T cd08287         234 GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG-GVELDVRELFFRNVGLAGGPAP----------VRRYLPEL  302 (345)
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC-CCccCHHHHHhcceEEEEecCC----------cHHHHHHH
Confidence            87889999999986 457888999999999999886553 2344544556788888763211          12344558


Q ss_pred             HHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          284 WPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       284 ~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ++++.++.+++  ++.+.++++++++|++.+.+.... |++++|
T Consensus       303 ~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~~  345 (345)
T cd08287         303 LDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLRP  345 (345)
T ss_pred             HHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeCC
Confidence            88999999875  457889999999999998876654 999986

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=8.7e-36  Score=262.44  Aligned_cols=322  Identities=38%  Similarity=0.616  Sum_probs=269.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCC-CCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~-~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      |+|+++...+.+..+++.+.+ |.+. +++++|++.++++|++|+..+.+........|.++|+|++|+|+.+|+++..+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~   79 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF   79 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence            899999877666668887777 6665 59999999999999999998887664333346678999999999999999999


Q ss_pred             CCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHH
Q 020487           80 KVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM  159 (325)
Q Consensus        80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~  159 (325)
                      ++||+|+++...|++++|+.++.+.++++|++++..+++.+..+..+|+.++.....++++++++|+|+++.+|++++++
T Consensus        80 ~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~  159 (323)
T cd08241          80 KVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQL  159 (323)
T ss_pred             CCCCEEEEecCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHH
Confidence            99999999975589999999999999999999999999889999999999987778899999999999999999999999


Q ss_pred             HHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEec
Q 020487          160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       160 a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ++..|++|++++.+.++.+.++++|.+.+++.....+...+.+.+.++++|.+++|+|+..+...+++++++|+++.+|.
T Consensus       160 a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~  239 (323)
T cd08241         160 AKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGF  239 (323)
T ss_pred             HHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhccCCEEEEEcc
Confidence            99999999999999999998888998888877777777788888777789999999999888888999999999999986


Q ss_pred             cCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCce
Q 020487          240 QGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIG  319 (325)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~g  319 (325)
                      .......++....+.+++++.+..+..... ..+....+.++.+.+++.++.+.+..+..|++++++++++.+.++...+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (323)
T cd08241         240 ASGEIPQIPANLLLLKNISVVGVYWGAYAR-REPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATG  318 (323)
T ss_pred             CCCCcCcCCHHHHhhcCcEEEEEecccccc-hhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCC
Confidence            543222233334456788888876544322 2223345566778899999998877888999999999999998888888


Q ss_pred             eEEEe
Q 020487          320 KIMLV  324 (325)
Q Consensus       320 kvvi~  324 (325)
                      |++++
T Consensus       319 ~vvv~  323 (323)
T cd08241         319 KVVLT  323 (323)
T ss_pred             cEEeC
Confidence            88863

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=3.7e-36  Score=267.37  Aligned_cols=302  Identities=27%  Similarity=0.409  Sum_probs=245.0

Q ss_pred             EEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCC-CCC-CCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487            4 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGS-YPP-PKGASPYPGLECSGTILSVGKNVSRWKV   81 (325)
Q Consensus         4 ~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~-~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (325)
                      +++...+   .+++++.+.|.+.++||+|++.++++|+.|++.+.+. .+. ...+|.++|+|++|+|+++|++++.|++
T Consensus         2 ~~~~~~~---~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~   78 (343)
T cd05285           2 AVLHGPG---DLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKV   78 (343)
T ss_pred             ceEecCC---ceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCC
Confidence            4556543   3889999999999999999999999999999876432 111 1124668899999999999999999999


Q ss_pred             CCEEEE------------------------E-c---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487           82 GDQVCA------------------------L-L---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (325)
Q Consensus        82 Gd~V~~------------------------~-~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~  133 (325)
                      ||+|++                        + .   ..|+|++|++++++.++++|+++++++++.+ .++.+|++++ .
T Consensus        79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~  156 (343)
T cd05285          79 GDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-R  156 (343)
T ss_pred             CCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-H
Confidence            999986                        2 1   2589999999999999999999999998876 5778899887 8


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchH---HHHHHHHhCCCcc
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDF---VARVKEETGGKGV  209 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~  209 (325)
                      .+.++++++++|.|+ |.+|.+++++|+.+|++ |+++++++++.+.++++|++.+++.+...+   .+.+.+.++++++
T Consensus       157 ~~~~~~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~  235 (343)
T cd05285         157 RAGVRPGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGP  235 (343)
T ss_pred             hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCC
Confidence            889999999999876 89999999999999997 889988899999889999999988776654   6777788887889


Q ss_pred             cEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHH
Q 020487          210 DVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA  288 (325)
Q Consensus       210 d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (325)
                      |+++||.|.. .+...+++++++|+++.+|..... ..++......+++.+.+.....           +.++.+++++.
T Consensus       236 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~  303 (343)
T cd05285         236 DVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE-VTLPLSAASLREIDIRGVFRYA-----------NTYPTAIELLA  303 (343)
T ss_pred             CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-CccCHHHHhhCCcEEEEeccCh-----------HHHHHHHHHHH
Confidence            9999999976 678889999999999999854432 3344445555677766653221           23445788899


Q ss_pred             CCccc--cccccccchhhHHHHHHHHHhCC-CceeEEE
Q 020487          289 VGKVK--PVIYKYLPLCEAAEAHQLMESSQ-HIGKIML  323 (325)
Q Consensus       289 ~g~l~--~~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi  323 (325)
                      ++.+.  +.+.++|+++++.+|++.+.+++ ..+|+++
T Consensus       304 ~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         304 SGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             cCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            99865  44678899999999999998875 4589887

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.6e-36  Score=266.47  Aligned_cols=297  Identities=31%  Similarity=0.482  Sum_probs=241.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      ||++++..++ .+.+++++.+.|+++++||+|++.++++|++|+..+.+.. . ..+|.++|||++|+|+++|+++..|+
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~-~-~~~~~~~g~e~~G~v~~vG~~v~~~~   77 (325)
T cd08264           1 MKALVFEKSG-IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK-V-KPMPHIPGAEFAGVVEEVGDHVKGVK   77 (325)
T ss_pred             CeeEEeccCC-CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCC-C-CCCCeecccceeEEEEEECCCCCCCC
Confidence            8999998766 5668888888888999999999999999999998876422 1 12466899999999999999999999


Q ss_pred             CCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487           81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (325)
Q Consensus        81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~  133 (325)
                      +||+|+.+.                           ..|+|++|+.++.+.++++|+++++++++.++.++.++|+++..
T Consensus        78 ~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~  157 (325)
T cd08264          78 KGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT  157 (325)
T ss_pred             CCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh
Confidence            999998651                           35899999999999999999999999999999999999999854


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                       .+++++++++|+|++|.+|++++++|+.+|++|+++++    .+.++++|++++++...  ..+.+.+.+  +++|+++
T Consensus       158 -~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~~~g~~~~~~~~~--~~~~l~~~~--~~~d~vl  228 (325)
T cd08264         158 -AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLKEFGADEVVDYDE--VEEKVKEIT--KMADVVI  228 (325)
T ss_pred             -cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHHHhCCCeeecchH--HHHHHHHHh--CCCCEEE
Confidence             88999999999999999999999999999999988873    36667899888886543  244555555  5799999


Q ss_pred             eCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccc
Q 020487          214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK  293 (325)
Q Consensus       214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  293 (325)
                      +|+|...+..++++++++|+++.+|........++...+..++.++.+......          +.++.+++++.+.+  
T Consensus       229 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~--  296 (325)
T cd08264         229 NSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTR----------KELLELVKIAKDLK--  296 (325)
T ss_pred             ECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCH----------HHHHHHHHHHHcCC--
Confidence            999998888999999999999999875333345566666667777777643211          22333667775433  


Q ss_pred             cccccccchhhHHHHHHHHHhCCCceeE
Q 020487          294 PVIYKYLPLCEAAEAHQLMESSQHIGKI  321 (325)
Q Consensus       294 ~~~~~~~~l~~~~~a~~~~~~~~~~gkv  321 (325)
                      ..+.+.|+++++++|++.+.+++..+|+
T Consensus       297 ~~~~~~~~~~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         297 VKVWKTFKLEEAKEALKELFSKERDGRI  324 (325)
T ss_pred             ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence            4466889999999999999888777775

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=9.1e-36  Score=263.48  Aligned_cols=311  Identities=25%  Similarity=0.308  Sum_probs=253.3

Q ss_pred             EEEEEcCCC----CCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC--CCCCCCCCCCceeEEEEEecCC
Q 020487            2 KAIVITQPG----SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKN   75 (325)
Q Consensus         2 ~a~~~~~~~----~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~   75 (325)
                      ||+++...+    .++.+++++.+.|++.++||+||+.++++|+.|.....+....  +...+.++|+|++|+|+++|++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~   82 (329)
T cd05288           3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP   82 (329)
T ss_pred             cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence            677777554    4577999999999999999999999999999887655553211  1112457899999999999965


Q ss_pred             CCCCCCCCEEEEEcCCceeeeEEeecC-CceeeCCCCCC--HHhhcc-CcchHHHHHHHHHhhcCCCCCCEEEEEcCCch
Q 020487           76 VSRWKVGDQVCALLGGGGYAEKVAVPA-GQVLPVPSGVS--LKDAAA-FPEVACTVWSTVFMTSHLSPGESFLVHGGSSG  151 (325)
Q Consensus        76 ~~~~~~Gd~V~~~~~~g~~~~~~~~~~-~~~~~~p~~~~--~~~aa~-l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~  151 (325)
                        .+++||+|+++   ++|++|+.++. +.++++|++++  ..++++ +++++.++|+++.....+.++++++|+|++|.
T Consensus        83 --~~~~Gd~V~~~---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~  157 (329)
T cd05288          83 --DFKVGDLVSGF---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGA  157 (329)
T ss_pred             --CCCCCCEEecc---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcch
Confidence              79999999987   58999999999 99999999985  445545 88999999999877788899999999998899


Q ss_pred             HHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccC
Q 020487          152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI  230 (325)
Q Consensus       152 ~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~  230 (325)
                      +|++++++++..|++|+++++++++.+.+++ +|++.+++.....+...+.+..+ +++|+++||+|+..+..+++++++
T Consensus       158 ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~-~~~d~vi~~~g~~~~~~~~~~l~~  236 (329)
T cd05288         158 VGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAP-DGIDVYFDNVGGEILDAALTLLNK  236 (329)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhcc-CCceEEEEcchHHHHHHHHHhcCC
Confidence            9999999999999999999999999998887 99988888877667777777765 689999999999888899999999


Q ss_pred             CCEEEEEeccCCcccc-----cchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhH
Q 020487          231 DGRLFIIGTQGGAKTE-----LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEA  305 (325)
Q Consensus       231 ~g~~v~~g~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~  305 (325)
                      +|+++.+|........     .+....+.+++++.+.......     ....+.++.+.+++.+|.+++.....++++++
T Consensus       237 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~  311 (329)
T cd05288         237 GGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYA-----DRFPEALAELAKWLAEGKLKYREDVVEGLENA  311 (329)
T ss_pred             CceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhH-----HHHHHHHHHHHHHHHCCCccccccccccHHHH
Confidence            9999999865542211     2344456788888876543221     12345666688999999988766677999999


Q ss_pred             HHHHHHHHhCCCceeEEE
Q 020487          306 AEAHQLMESSQHIGKIML  323 (325)
Q Consensus       306 ~~a~~~~~~~~~~gkvvi  323 (325)
                      +++++.+.+++..+|+++
T Consensus       312 ~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         312 PEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             HHHHHHHhcCCCccceeC
Confidence            999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=1.3e-36  Score=271.08  Aligned_cols=320  Identities=32%  Similarity=0.425  Sum_probs=247.2

Q ss_pred             CEEEEEcCCCCCc-ceEEEeecCCCC-CCCeEEEEEeeeecChhhhhhhhCCCCC--------------CCCCCCCCCCc
Q 020487            1 MKAIVITQPGSPE-VLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPP--------------PKGASPYPGLE   64 (325)
Q Consensus         1 m~a~~~~~~~~~~-~l~~~~~~~~~~-~~~ev~v~v~~~~i~~~D~~~~~g~~~~--------------~~~~p~~~G~e   64 (325)
                      |||+++..+++++ .+++++.+.|.| .++||+|++.++++|++|+....|....              ....|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            8999999888753 478899999999 4999999999999999999988774210              22347799999


Q ss_pred             eeEEEEEecCCCCCCCCCCEEEEEc---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCC--
Q 020487           65 CSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP--  139 (325)
Q Consensus        65 ~~G~V~~vG~~~~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~--  139 (325)
                      ++|+|+++|+++..+++||+|+++.   ..|+|++|+.++.+.++++|+++++++++.++..+.++|+++.....+.+  
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~  160 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKN  160 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCcc
Confidence            9999999999999999999999875   25899999999999999999999999999999999999999877777654  


Q ss_pred             --CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          140 --GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       140 --~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                        |++++|+|++|.+|.+++++++.+|++|++++++ ++.+.++++|.+.+++.....+...+..   .+++|++++|+|
T Consensus       161 ~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~l~~---~~~vd~vi~~~g  236 (350)
T cd08248         161 AAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKSLGADDVIDYNNEDFEEELTE---RGKFDVILDTVG  236 (350)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHHhCCceEEECCChhHHHHHHh---cCCCCEEEECCC
Confidence              9999999998999999999999999999988855 5677778899888888766555544432   357999999999


Q ss_pred             hHHHHHhhccccCCCEEEEEeccCCccc---ccchHH----HHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCC
Q 020487          218 ASYFQRNLGSLNIDGRLFIIGTQGGAKT---ELNITS----LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG  290 (325)
Q Consensus       218 ~~~~~~~~~~l~~~g~~v~~g~~~~~~~---~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  290 (325)
                      ......++++++++|+++.+|.......   ......    +......+....................++.+++++.+|
T Consensus       237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  316 (350)
T cd08248         237 GDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDG  316 (350)
T ss_pred             hHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCC
Confidence            9888889999999999999985432110   110000    000111110000000000000000123455588999999


Q ss_pred             ccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          291 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       291 ~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      .+.+.+.+.|++++++++++.+.+++..+|+++.
T Consensus       317 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         317 KIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             CEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence            9887788999999999999999988878888863

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=6.4e-36  Score=265.64  Aligned_cols=307  Identities=35%  Similarity=0.445  Sum_probs=246.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCC--CCCCCCCCCCCCceeEEEEEecCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY--PPPKGASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      ||+++...++.  .+++.+.+.|.|.++|++||+.++++|++|++.+.+..  .....+|.++|+|++|+|+.+|++++.
T Consensus         1 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~   78 (341)
T cd05281           1 MKAIVKTKAGP--GAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTR   78 (341)
T ss_pred             CcceEEecCCC--ceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCC
Confidence            89999997664  48899999999999999999999999999998765432  111224668999999999999999999


Q ss_pred             CCCCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHH
Q 020487           79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (325)
Q Consensus        79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l  131 (325)
                      +++||+|+++.                           ..|+|++|++++.+.++++|++++++.+ ++...+.++++++
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~  157 (341)
T cd05281          79 VKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTV  157 (341)
T ss_pred             CCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHHH
Confidence            99999998851                           3588999999999999999999998554 5677778888876


Q ss_pred             HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487          132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      .  ...+++++++|.|+ |.+|++++++++..|+ +|+++.+++++.+.++++|++++++....++. .+.+..+++++|
T Consensus       158 ~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~vd  233 (341)
T cd05281         158 L--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDVV-EVKSVTDGTGVD  233 (341)
T ss_pred             H--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHH-HHHHHcCCCCCC
Confidence            4  45578999999876 9999999999999999 79988888888888889999888887766777 778888878999


Q ss_pred             EEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchH-HHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHH
Q 020487          211 VILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNIT-SLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA  288 (325)
Q Consensus       211 ~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (325)
                      ++|||+|.. .....+++|+++|+++.+|.... ....+.. ....+++.+.+......         .+.+..+.+++.
T Consensus       234 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~  303 (341)
T cd05281         234 VVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG-PVDIDLNNLVIFKGLTVQGITGRKM---------FETWYQVSALLK  303 (341)
T ss_pred             EEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-CcccccchhhhccceEEEEEecCCc---------chhHHHHHHHHH
Confidence            999999864 56788999999999999986543 2222222 24456666665432111         122344778899


Q ss_pred             CCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          289 VGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       289 ~g~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +|.+.  +.+...++++++++|++.+.+++ .||+|++|
T Consensus       304 ~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         304 SGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             cCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence            99876  45678899999999999999988 89999987

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=1.8e-35  Score=258.33  Aligned_cols=299  Identities=30%  Similarity=0.491  Sum_probs=250.0

Q ss_pred             CCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEcC--CceeeeEEe
Q 020487           22 DPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG--GGGYAEKVA   99 (325)
Q Consensus        22 ~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~--~g~~~~~~~   99 (325)
                      .|++.+++++|++.++++|+.|+..+.+.++....+|.++|+|++|+|+++|+++.++++||+|+++..  .|+|++|+.
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~   81 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVT   81 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEE
Confidence            467899999999999999999999998876554456789999999999999999999999999998853  589999999


Q ss_pred             ecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHH
Q 020487          100 VPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV  179 (325)
Q Consensus       100 ~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~  179 (325)
                      ++++.++++|+++++++++.++..+.++|.++ +...+++|++++|+++++.+|.+++++++.+|++|+++++++++.+.
T Consensus        82 ~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  160 (303)
T cd08251          82 VPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEY  160 (303)
T ss_pred             ccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            99999999999999999999999999999998 57889999999999999999999999999999999999999999999


Q ss_pred             HHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCc-ccccchHHHHhhccE
Q 020487          180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLT  258 (325)
Q Consensus       180 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~  258 (325)
                      ++++|.+.+++.....+...+.+.+.++++|.+++|+++..+...+++++++|+++.+|..... ...++... +.+++.
T Consensus       161 ~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~  239 (303)
T cd08251         161 LKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSV-LSNNQS  239 (303)
T ss_pred             HHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChhH-hhcCce
Confidence            9999999998888777778888888878899999999988888889999999999999865422 12233333 233444


Q ss_pred             eeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487          259 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML  323 (325)
Q Consensus       259 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  323 (325)
                      +....+..... ..+....+.+.++.+++.+|.+++...+.|++++++++++.+.+++..+|+++
T Consensus       240 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         240 FHSVDLRKLLL-LDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             EEEEehHHhhh-hCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            43333222111 12233456667788999999988777899999999999999998888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.6e-35  Score=258.64  Aligned_cols=300  Identities=24%  Similarity=0.316  Sum_probs=245.3

Q ss_pred             cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhh-hCCCCCC-CCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEcC
Q 020487           13 EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQR-KGSYPPP-KGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG   90 (325)
Q Consensus        13 ~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~-~g~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~   90 (325)
                      +.+++++.+.|++.++||+|++.++++|++|+..+ .|..+.. ...|.++|+|++|+|+++|++++.+++||+|+.+. 
T Consensus         5 ~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~-   83 (312)
T cd08269           5 GRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS-   83 (312)
T ss_pred             CeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec-
Confidence            35899999999999999999999999999999987 6654321 12367899999999999999999999999999985 


Q ss_pred             CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEE
Q 020487           91 GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFV  169 (325)
Q Consensus        91 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~  169 (325)
                      .|+|++|+.++.+.++++|+++  ..++.+..++.++++++. ..+++++++++|+|+ |.+|.+++++|+..|++ |++
T Consensus        84 ~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~-g~vg~~~~~la~~~g~~~v~~  159 (312)
T cd08269          84 GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGA-GFIGLLFLQLAAAAGARRVIA  159 (312)
T ss_pred             CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEE
Confidence            4889999999999999999988  233322377788998885 788999999999975 89999999999999998 999


Q ss_pred             EecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccc
Q 020487          170 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELN  248 (325)
Q Consensus       170 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~  248 (325)
                      +++++++.+.++++|++.+++.+...+.+.+.+.+++.++|+++||.|. ......+++++++|+++.+|........++
T Consensus       160 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~  239 (312)
T cd08269         160 IDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVP  239 (312)
T ss_pred             ECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccC
Confidence            9988888888889999888887777788888888887899999999975 456888999999999999986543333445


Q ss_pred             hHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCC-ceeEEE
Q 020487          249 ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQH-IGKIML  323 (325)
Q Consensus       249 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~-~gkvvi  323 (325)
                      ...+..+++.+.++......      ...+.++.+.+++.++.+.+  ++.+.|++++++++++.+.+++. ..|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         240 FQTWNWKGIDLINAVERDPR------IGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             HHHHhhcCCEEEEecccCcc------chhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence            55556677777665332211      12345666889999999886  35788999999999999988864 478876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.1e-35  Score=258.46  Aligned_cols=320  Identities=35%  Similarity=0.553  Sum_probs=262.0

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (325)
Q Consensus         2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (325)
                      ||++....+.+..+++++.+.|+|+++||+|++.++++|++|+....+.++.....|.++|||++|+|+.+|+++.++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~   80 (337)
T cd08275           1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV   80 (337)
T ss_pred             CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence            57777776766668888888888899999999999999999999888876544445778999999999999999999999


Q ss_pred             CCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHH
Q 020487           82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK  161 (325)
Q Consensus        82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~  161 (325)
                      ||+|+++...|+|++|+.++.+.++++|+++++.+++.++.+..++|.++.....++++++++|+|++|.+|++++++++
T Consensus        81 G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~  160 (337)
T cd08275          81 GDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCK  160 (337)
T ss_pred             CCEEEEecCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHH
Confidence            99999997778999999999999999999999999999999999999998888889999999999999999999999999


Q ss_pred             HC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEecc
Q 020487          162 CQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       162 ~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      .. +..++... .+++.+.++.+|.+.+++.....+...+.+.++ +++|++++|+|+......+++++++|+++.+|..
T Consensus       161 ~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~  238 (337)
T cd08275         161 TVPNVTVVGTA-SASKHEALKENGVTHVIDYRTQDYVEEVKKISP-EGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAA  238 (337)
T ss_pred             HccCcEEEEeC-CHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhC-CCceEEEECCcHHHHHHHHHhhccCcEEEEEeec
Confidence            98 43433332 345777778899888888777777777777775 6799999999998888889999999999999865


Q ss_pred             CCc-ccc---------------cchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhh
Q 020487          241 GGA-KTE---------------LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCE  304 (325)
Q Consensus       241 ~~~-~~~---------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~  304 (325)
                      ... ...               .....++.+++++.++.+..... ... .....++.+.+++.++.+.+.....|++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (337)
T cd08275         239 NLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFE-ERE-LLTEVMDKLLKLYEEGKIKPKIDSVFPFEE  316 (337)
T ss_pred             CCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhh-ChH-HHHHHHHHHHHHHHCCCCCCceeeEEcHHH
Confidence            431 111               11234566788888776542211 111 223456668888999998877788999999


Q ss_pred             HHHHHHHHHhCCCceeEEEeC
Q 020487          305 AAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       305 ~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ++++++.+.+++..+|++++|
T Consensus       317 ~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         317 VGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHHHHHHcCCCcceEEEeC
Confidence            999999999888889999876

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.5e-35  Score=265.50  Aligned_cols=296  Identities=28%  Similarity=0.380  Sum_probs=239.6

Q ss_pred             eEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCC------CCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEE-
Q 020487           15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY------PPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCA-   87 (325)
Q Consensus        15 l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~------~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~-   87 (325)
                      +++++.|.|+++++||+|++.++++|++|++.+.+..      +....+|.++|||++|+|+++|++++.|++||+|+. 
T Consensus        39 ~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~  118 (384)
T cd08265          39 LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAE  118 (384)
T ss_pred             EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEEC
Confidence            8999999999999999999999999999998876321      222345788999999999999999999999999985 


Q ss_pred             --------------------------EcCCceeeeEEeecCCceeeCCCC-------CCHHhhccCcchHHHHHHHHHhh
Q 020487           88 --------------------------LLGGGGYAEKVAVPAGQVLPVPSG-------VSLKDAAAFPEVACTVWSTVFMT  134 (325)
Q Consensus        88 --------------------------~~~~g~~~~~~~~~~~~~~~~p~~-------~~~~~aa~l~~~~~~a~~~l~~~  134 (325)
                                                +..+|+|++|+.++++.++++|++       ++.. +++++.++++||+++...
T Consensus       119 ~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~  197 (384)
T cd08265         119 EMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIR  197 (384)
T ss_pred             CCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhh
Confidence                                      333689999999999999999986       3445 556778889999998665


Q ss_pred             -cCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCc---hHHHHHHHHhCCCcc
Q 020487          135 -SHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTE---DFVARVKEETGGKGV  209 (325)
Q Consensus       135 -~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~  209 (325)
                       .++++|++|+|+|+ |.+|++++++|+..|+ +|++++.++++.+.++++|++.+++....   .+...+.+.++++++
T Consensus       198 ~~~~~~g~~VlV~g~-g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gv  276 (384)
T cd08265         198 GGGFRPGAYVVVYGA-GPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGA  276 (384)
T ss_pred             cCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCC
Confidence             68999999999975 9999999999999999 79999988888888899999988876643   677788888888899


Q ss_pred             cEEEeCCChH--HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHH
Q 020487          210 DVILDCMGAS--YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI  287 (325)
Q Consensus       210 d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (325)
                      |+++||.|..  .+...+++++++|+++.+|.... ...++...+..+..++.+......         ...++++++++
T Consensus       277 Dvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~~~---------~~~~~~~~~ll  346 (384)
T cd08265         277 DIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT-TVPLHLEVLQVRRAQIVGAQGHSG---------HGIFPSVIKLM  346 (384)
T ss_pred             CEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC-CCcccHHHHhhCceEEEEeeccCC---------cchHHHHHHHH
Confidence            9999999963  56788999999999999986543 223344455556667776532111         12344488899


Q ss_pred             HCCccccc--cccccchhhHHHHHHHHHhCCCceeEEE
Q 020487          288 AVGKVKPV--IYKYLPLCEAAEAHQLMESSQHIGKIML  323 (325)
Q Consensus       288 ~~g~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi  323 (325)
                      .++.+.+.  +.+.|+++++++|++.+.++ ..+|+|+
T Consensus       347 ~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         347 ASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             HcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence            99998753  57889999999999997554 5688875

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.1e-35  Score=261.18  Aligned_cols=298  Identities=27%  Similarity=0.357  Sum_probs=243.5

Q ss_pred             CEEEEEcCCCCC--cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCC
Q 020487            1 MKAIVITQPGSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         1 m~a~~~~~~~~~--~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      ||++++..++++  ..+++++.+.|.+.++||+||+.++++|++|++...|..+. ..+|.++|||++|+|+++|+++..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~   79 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP-PKLPLIPGHEIVGRVEAVGPGVTR   79 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC-CCCCccccccccEEEEEECCCCCC
Confidence            899999988742  35888888888899999999999999999999999887654 234779999999999999999999


Q ss_pred             CCCCCEEEEE-----------c-----------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHH
Q 020487           79 WKVGDQVCAL-----------L-----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST  130 (325)
Q Consensus        79 ~~~Gd~V~~~-----------~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~  130 (325)
                      +++||+|+..           +                 .+|+|++|+.++.+.++++|+++++.+++.+.+++.+||++
T Consensus        80 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~  159 (329)
T cd08298          80 FSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRA  159 (329)
T ss_pred             CcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHH
Confidence            9999999762           1                 25889999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      + +.++++++++++|+|+ |.+|++++++++..|++|+++++++++++.++++|++.+++....          .++++|
T Consensus       160 ~-~~~~~~~~~~vlV~g~-g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~vD  227 (329)
T cd08298         160 L-KLAGLKPGQRLGLYGF-GASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDL----------PPEPLD  227 (329)
T ss_pred             H-HhhCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCcc----------CCCccc
Confidence            8 8889999999999985 999999999999999999999999999999999999877765432          234799


Q ss_pred             EEEeCCC-hHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHC
Q 020487          211 VILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV  289 (325)
Q Consensus       211 ~vi~~~g-~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (325)
                      +++++.+ ...+..++++++++|+++.+|.........+... +.++..+.+....          ..+.++.+.+++.+
T Consensus       228 ~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~----------~~~~~~~~~~l~~~  296 (329)
T cd08298         228 AAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANL----------TRQDGEEFLKLAAE  296 (329)
T ss_pred             EEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEecCC----------CHHHHHHHHHHHHc
Confidence            9999865 4567888999999999998874332211222222 2344555544321          11233447888889


Q ss_pred             CccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487          290 GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML  323 (325)
Q Consensus       290 g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  323 (325)
                      +.+++. .+.|+++++++|++.+++++..||+|+
T Consensus       297 ~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         297 IPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             CCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence            988764 588999999999999999988888774

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=3.6e-35  Score=262.02  Aligned_cols=318  Identities=30%  Similarity=0.427  Sum_probs=240.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCC-CCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCC-C
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS-R   78 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~-~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~-~   78 (325)
                      .|++++..++++..++..+.+.|. +.++||+|++.++++|++|+..+.+........|.++|+|++|+|+++|++++ .
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (352)
T cd08247           1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE   80 (352)
T ss_pred             CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence            478999988887555555555553 38999999999999999999887543221112367899999999999999998 8


Q ss_pred             CCCCCEEEEEc-----CCceeeeEEeecCC----ceeeCCCCCCHHhhccCcchHHHHHHHHHhhc-CCCCCCEEEEEcC
Q 020487           79 WKVGDQVCALL-----GGGGYAEKVAVPAG----QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS-HLSPGESFLVHGG  148 (325)
Q Consensus        79 ~~~Gd~V~~~~-----~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~-~~~~~~~vli~g~  148 (325)
                      |++||+|+++.     ..|+|++|++++..    .++++|+++++.+++.++....++|+++.... ++++|++++|+|+
T Consensus        81 ~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga  160 (352)
T cd08247          81 WKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGG  160 (352)
T ss_pred             CCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECC
Confidence            99999999885     25899999999987    78999999999999999999999999987666 7899999999999


Q ss_pred             CchHHHHHHHHHHHC-CC-EEEEEecChhhHHHHHHcCCCEEEeCCCch---HHHHHHHH-hCCCcccEEEeCCCh-HHH
Q 020487          149 SSGIGTFAIQMGKCQ-GV-RVFVTAGSEEKLAVCKDLGADVCINYKTED---FVARVKEE-TGGKGVDVILDCMGA-SYF  221 (325)
Q Consensus       149 ~g~~G~~~~~~a~~~-g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~-~~~~~~d~vi~~~g~-~~~  221 (325)
                      ++.+|.+++++|+.. +. +++.+. ++++...++++|++.+++.+...   +...+.+. ++++++|++|||+|+ ...
T Consensus       161 ~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~  239 (352)
T cd08247         161 STSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLF  239 (352)
T ss_pred             CchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHH
Confidence            999999999999987 55 566665 55556677889998888866544   44444444 436689999999998 566


Q ss_pred             HHhhcccc---CCCEEEEEeccCCccccc-----------chHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHH
Q 020487          222 QRNLGSLN---IDGRLFIIGTQGGAKTEL-----------NITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI  287 (325)
Q Consensus       222 ~~~~~~l~---~~g~~v~~g~~~~~~~~~-----------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (325)
                      ..++++++   ++|+++.+++........           .... +.+++.+....+........    .+.++.+.+++
T Consensus       240 ~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  314 (352)
T cd08247         240 PHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARK-LFGSLGLWSYNYQFFLLDPN----ADWIEKCAELI  314 (352)
T ss_pred             HHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhh-hhhhhcCCCcceEEEEecCC----HHHHHHHHHHH
Confidence            78888999   999999875332111000           0011 11222222221111100001    13455588899


Q ss_pred             HCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          288 AVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       288 ~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      .++.+++.+.+.++++++++|++.+++++..||++++
T Consensus       315 ~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  351 (352)
T cd08247         315 ADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIK  351 (352)
T ss_pred             hCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence            9999988788999999999999999998888999875

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=4.7e-35  Score=259.94  Aligned_cols=294  Identities=26%  Similarity=0.361  Sum_probs=235.9

Q ss_pred             cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhh-CCCCC-CCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEE--
Q 020487           13 EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK-GSYPP-PKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL--   88 (325)
Q Consensus        13 ~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~--   88 (325)
                      +.+++++.+.|+++++||+||+.++++|++|+..+. +..+. ....|.++|+|++|+|+++|++++.|++||+|+..  
T Consensus         7 ~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~   86 (339)
T cd08232           7 GDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPS   86 (339)
T ss_pred             CceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccC
Confidence            349999999999999999999999999999998764 33321 11346789999999999999999999999999862  


Q ss_pred             -----------------------c-------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCC
Q 020487           89 -----------------------L-------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS  138 (325)
Q Consensus        89 -----------------------~-------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~  138 (325)
                                             .       .+|+|++|++++.+.++++|+++++++++. ..++.++|+++.....+ 
T Consensus        87 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-  164 (339)
T cd08232          87 RPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-  164 (339)
T ss_pred             CcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-
Confidence                                   1       258999999999999999999999998875 57788999988666556 


Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHh-CCCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET-GGKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~d~vi~~~  216 (325)
                      ++++|+|.|+ |.+|.+++++|+.+|+ +++++++++++.+.++++|++.+++.+...+    .+.. +..++|+++||.
T Consensus       165 ~~~~VLI~g~-g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~----~~~~~~~~~vd~vld~~  239 (339)
T cd08232         165 AGKRVLVTGA-GPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPL----AAYAADKGDFDVVFEAS  239 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhh----hhhhccCCCccEEEECC
Confidence            8999999885 8999999999999999 8999998888888888999988887765442    2222 234699999999


Q ss_pred             Ch-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccc-
Q 020487          217 GA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP-  294 (325)
Q Consensus       217 g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~-  294 (325)
                      |. ..+...+++|+++|+++.+|... .....+...++.+++++.+....           .+.++.+++++.+|.+++ 
T Consensus       240 g~~~~~~~~~~~L~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~i~~~  307 (339)
T cd08232         240 GAPAALASALRVVRPGGTVVQVGMLG-GPVPLPLNALVAKELDLRGSFRF-----------DDEFAEAVRLLAAGRIDVR  307 (339)
T ss_pred             CCHHHHHHHHHHHhcCCEEEEEecCC-CCccCcHHHHhhcceEEEEEecC-----------HHHHHHHHHHHHcCCCCch
Confidence            95 56788899999999999998644 22333444455577777665321           123445788899998763 


Q ss_pred             -ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          295 -VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       295 -~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                       .+.++|++++++++++.+.++...||+|+++
T Consensus       308 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         308 PLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             hheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence             4678999999999999999888889999875

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=4.4e-35  Score=260.15  Aligned_cols=301  Identities=31%  Similarity=0.400  Sum_probs=240.6

Q ss_pred             CCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCC--CCCCCCCCCCCceeEEEEEecCCCCCCCCCCEE
Q 020487            8 QPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKNVSRWKVGDQV   85 (325)
Q Consensus         8 ~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V   85 (325)
                      .++.+  +++++.|.|.|.++||+||+.++++|++|+.++.+...  ....+|.++|+|++|+|+++|++++.|++||+|
T Consensus         6 ~~~~~--~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V   83 (340)
T TIGR00692         6 KPGYG--AELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYV   83 (340)
T ss_pred             cCCCC--cEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEE
Confidence            44444  88899999999999999999999999999988765421  111246689999999999999999999999999


Q ss_pred             EE---------------------------EcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCC
Q 020487           86 CA---------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS  138 (325)
Q Consensus        86 ~~---------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~  138 (325)
                      ++                           +...|+|++|++++++.++++|++++.+++ +++.++.++++++  ....+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~~  160 (340)
T TIGR00692        84 SVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGPI  160 (340)
T ss_pred             EECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccCC
Confidence            87                           224589999999999999999999998655 5777888888876  34568


Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +|++++|.|+ |.+|.+++++++.+|++ |+++..++++.+.++++|++.+++.....+.+.+.+.++++++|+++||+|
T Consensus       161 ~g~~vlI~~~-g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g  239 (340)
T TIGR00692       161 SGKSVLVTGA-GPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSG  239 (340)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCC
Confidence            8999999875 99999999999999996 888877888888888999988888877778888888888788999999988


Q ss_pred             h-HHHHHhhccccCCCEEEEEeccCCcccccchH-HHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccc--
Q 020487          218 A-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNIT-SLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--  293 (325)
Q Consensus       218 ~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--  293 (325)
                      . ..+...+++|+++|+++.+|..... ...+.. .+..+++.+.+...  .   ..    .+.+..+.+++.++.++  
T Consensus       240 ~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~--~---~~----~~~~~~~~~~l~~~~l~~~  309 (340)
T TIGR00692       240 APKALEQGLQAVTPGGRVSLLGLPPGK-VTIDFTNKVIFKGLTIYGITG--R---HM----FETWYTVSRLIQSGKLDLD  309 (340)
T ss_pred             CHHHHHHHHHhhcCCCEEEEEccCCCC-cccchhhhhhhcceEEEEEec--C---Cc----hhhHHHHHHHHHcCCCChH
Confidence            5 4568889999999999999875322 222232 44556666665431  1   11    12334588899999986  


Q ss_pred             cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          294 PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       294 ~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +.+.+.+++++++++++.+.+++ .||+|++.
T Consensus       310 ~~~~~~~~l~~~~~a~~~~~~~~-~gkvvv~~  340 (340)
T TIGR00692       310 PIITHKFKFDKFEKGFELMRSGQ-TGKVILSL  340 (340)
T ss_pred             HheeeeeeHHHHHHHHHHHhcCC-CceEEEeC
Confidence            45689999999999999998776 49999863

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=3e-35  Score=260.25  Aligned_cols=301  Identities=30%  Similarity=0.405  Sum_probs=247.9

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (325)
Q Consensus         2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (325)
                      ||+++.++|.  .+++++.+.|.+.++|++|++.++++|++|+....+..+. ..+|.++|+|++|+|+++|++++.+++
T Consensus         1 ~~~~~~~~~~--~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~~g~~~~~~~~   77 (330)
T cd08245           1 KAAVVHAAGG--PLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG-SKYPLVPGHEIVGEVVEVGAGVEGRKV   77 (330)
T ss_pred             CeEEEecCCC--CceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC-CCCCcccCccceEEEEEECCCCccccc
Confidence            6888888754  3899999999999999999999999999999999887643 235778999999999999999999999


Q ss_pred             CCEEEE----------------------------EcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487           82 GDQVCA----------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (325)
Q Consensus        82 Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~  133 (325)
                      ||+|+.                            +...|+|++|+.++.+.++++|+++++.+++.+...+.+||.++..
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~  157 (330)
T cd08245          78 GDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD  157 (330)
T ss_pred             CCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh
Confidence            999973                            2235889999999999999999999999999999999999999854


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                       .+++++++++|+|+ |.+|++++++|+..|++|+++++++++.+.++++|++.+++.........    .. +++|+++
T Consensus       158 -~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~-~~~d~vi  230 (330)
T cd08245         158 -AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQA----AA-GGADVIL  230 (330)
T ss_pred             -hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHh----cc-CCCCEEE
Confidence             78999999999986 77999999999999999999999999999998899888877655443222    22 4799999


Q ss_pred             eCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcc
Q 020487          214 DCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKV  292 (325)
Q Consensus       214 ~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l  292 (325)
                      +|++. .....++++++++|+++.+|.........+..++..++.++.+......          ..++.+++++.++.+
T Consensus       231 ~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ll~~~~l  300 (330)
T cd08245         231 VTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGR----------ADLQEALDFAAEGKV  300 (330)
T ss_pred             ECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCH----------HHHHHHHHHHHcCCC
Confidence            99774 5568889999999999999865433222234456667777777654321          234447788889988


Q ss_pred             ccccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487          293 KPVIYKYLPLCEAAEAHQLMESSQHIGKIML  323 (325)
Q Consensus       293 ~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  323 (325)
                      .+ ....+++++++++++.+.+++..+|+|+
T Consensus       301 ~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         301 KP-MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             cc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            75 4578999999999999999888888874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=8.7e-35  Score=260.52  Aligned_cols=297  Identities=24%  Similarity=0.337  Sum_probs=234.8

Q ss_pred             ceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC--CCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEE---
Q 020487           14 VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL---   88 (325)
Q Consensus        14 ~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~---   88 (325)
                      .+++++.+.|.|.++||+||+.++++|++|++.+.+....  ...+|.++|||++|+|+++|+++++|++||+|+..   
T Consensus        28 ~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~  107 (364)
T PLN02702         28 TLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGI  107 (364)
T ss_pred             ceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcCCC
Confidence            3888888888899999999999999999999988763211  11236789999999999999999999999999862   


Q ss_pred             ----------------------c---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEE
Q 020487           89 ----------------------L---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESF  143 (325)
Q Consensus        89 ----------------------~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~v  143 (325)
                                            .   .+|+|++|+.++.+.++++|+++++.+++. ..++.+++.++ ...++.+++++
T Consensus       108 ~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~-~~~~~~a~~~~-~~~~~~~g~~v  185 (364)
T PLN02702        108 SCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAM-CEPLSVGVHAC-RRANIGPETNV  185 (364)
T ss_pred             CCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhh-hhHHHHHHHHH-HhcCCCCCCEE
Confidence                                  1   148999999999999999999999988874 23455688877 77889999999


Q ss_pred             EEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCC--CchHHHHHHHH--hCCCcccEEEeCCC-
Q 020487          144 LVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYK--TEDFVARVKEE--TGGKGVDVILDCMG-  217 (325)
Q Consensus       144 li~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~--~~~~~~d~vi~~~g-  217 (325)
                      +|+|+ |.+|++++++++..|++ ++++++++++.+.++++|++.+++.+  ...+.+.+.+.  ..++++|++|||+| 
T Consensus       186 lI~g~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  264 (364)
T PLN02702        186 LVMGA-GPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGF  264 (364)
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEEECCCC
Confidence            99985 99999999999999995 77777788888888999998876543  34455555543  23447999999999 


Q ss_pred             hHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccc--cc
Q 020487          218 ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PV  295 (325)
Q Consensus       218 ~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~  295 (325)
                      ...+..++++++++|+++.+|.... ...........+++++.++....           ..++.+++++.++.+.  +.
T Consensus       265 ~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~  332 (364)
T PLN02702        265 NKTMSTALEATRAGGKVCLVGMGHN-EMTVPLTPAAAREVDVVGVFRYR-----------NTWPLCLEFLRSGKIDVKPL  332 (364)
T ss_pred             HHHHHHHHHHHhcCCEEEEEccCCC-CCcccHHHHHhCccEEEEeccCh-----------HHHHHHHHHHHcCCCCchHh
Confidence            4667899999999999999986543 23345556677888888764321           1234478889999875  44


Q ss_pred             cccccch--hhHHHHHHHHHhCCCceeEEEeC
Q 020487          296 IYKYLPL--CEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       296 ~~~~~~l--~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +.+.|++  +++++|++.+.+++..+|+++.+
T Consensus       333 ~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~~  364 (364)
T PLN02702        333 ITHRFGFSQKEVEEAFETSARGGNAIKVMFNL  364 (364)
T ss_pred             eEEEeccChHHHHHHHHHHhcCCCceEEEEeC
Confidence            5677554  89999999999888888999864

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=4.1e-35  Score=256.65  Aligned_cols=304  Identities=35%  Similarity=0.581  Sum_probs=252.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCC--CCCCCCCCCCCceeEEEEEecCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      ||++++..++..+.+++++.+.|.++++||+|++.++++|++|+..+.+...  ....+|.++|||++|+|+.+|+++..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            8999999888766677888888888999999999999999999998877653  11234778999999999999999999


Q ss_pred             CCCCCEEEEEc---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHH
Q 020487           79 WKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF  155 (325)
Q Consensus        79 ~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~  155 (325)
                      +++||+|+++.   ..|+|++|+.++...++++|+++++..++.++..+.+++.++.....+.++++++|+|++|.+|++
T Consensus        81 ~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~  160 (309)
T cd05289          81 FKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSF  160 (309)
T ss_pred             CCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHH
Confidence            99999999986   258999999999999999999999999999999999999998777778999999999998999999


Q ss_pred             HHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEE
Q 020487          156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF  235 (325)
Q Consensus       156 ~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v  235 (325)
                      ++++++..|++|++++.++ +.+.++++|.+.+++.....+.+    ...++++|++++|+++.....++++++++|+++
T Consensus       161 ~~~~a~~~g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v  235 (309)
T cd05289         161 AVQLAKARGARVIATASAA-NADFLRSLGADEVIDYTKGDFER----AAAPGGVDAVLDTVGGETLARSLALVKPGGRLV  235 (309)
T ss_pred             HHHHHHHcCCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhh----ccCCCCceEEEECCchHHHHHHHHHHhcCcEEE
Confidence            9999999999999998777 77778888888887766555433    345567999999999988888999999999999


Q ss_pred             EEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhC
Q 020487          236 IIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESS  315 (325)
Q Consensus       236 ~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~  315 (325)
                      .+|...... .    ....+++++....+...         ...++.+.+++.++.+.+.+++.|++++++++++.+.++
T Consensus       236 ~~g~~~~~~-~----~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~  301 (309)
T cd05289         236 SIAGPPPAE-Q----AAKRRGVRAGFVFVEPD---------GEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHERLESG  301 (309)
T ss_pred             EEcCCCcch-h----hhhhccceEEEEEeccc---------HHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHHHHhC
Confidence            998654311 1    22345555555443211         345555888999999887788999999999999999988


Q ss_pred             CCceeEEE
Q 020487          316 QHIGKIML  323 (325)
Q Consensus       316 ~~~gkvvi  323 (325)
                      +..+|+++
T Consensus       302 ~~~~kvv~  309 (309)
T cd05289         302 HARGKVVL  309 (309)
T ss_pred             CCCCcEeC
Confidence            87788764

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.4e-34  Score=253.03  Aligned_cols=275  Identities=36%  Similarity=0.554  Sum_probs=229.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      ||+++....+ +..+++++.+.|.+.++||+||+.++++|++|.+...+.... ...|.++|+|++|+|+++|++++.|+
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   78 (306)
T cd08258           1 MKALVKTGPG-PGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDP-VETPVVLGHEFSGTIVEVGPDVEGWK   78 (306)
T ss_pred             CeeEEEecCC-CCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCc-CCCCeeeccceEEEEEEECCCcCcCC
Confidence            8999987643 355999999999999999999999999999999988887632 12367899999999999999999999


Q ss_pred             CCCEEEEEcC----------------------------CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487           81 VGDQVCALLG----------------------------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (325)
Q Consensus        81 ~Gd~V~~~~~----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~  132 (325)
                      +||+|+++..                            .|+|++|++++...++++|+++++++++ +.....++|+++.
T Consensus        79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~  157 (306)
T cd08258          79 VGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVA  157 (306)
T ss_pred             CCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHH
Confidence            9999998642                            4899999999999999999999999887 7778889999988


Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe--cChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA--GSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      ....++++++++|.| +|.+|.+++++|+..|++|++++  .++++.+.++++|++.+ +....++...+.+..+++++|
T Consensus       158 ~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~~vd  235 (306)
T cd08258         158 ERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGDGAD  235 (306)
T ss_pred             HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCCCCC
Confidence            888899999999977 59999999999999999988774  34446677788999878 777777888888888777899


Q ss_pred             EEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHC
Q 020487          211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV  289 (325)
Q Consensus       211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (325)
                      +++||+|. ..+...+++|+++|+++.+|........++...++.+++++.|+.+++..+          ++++++++++
T Consensus       236 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~----------~~~~~~~~~~  305 (306)
T cd08258         236 VVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPAS----------WETALRLLAS  305 (306)
T ss_pred             EEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHh----------HHHHHHHHhc
Confidence            99999975 566788999999999999988664445567777888999999988754421          2236666665


Q ss_pred             C
Q 020487          290 G  290 (325)
Q Consensus       290 g  290 (325)
                      |
T Consensus       306 ~  306 (306)
T cd08258         306 G  306 (306)
T ss_pred             C
Confidence            4

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.4e-33  Score=248.26  Aligned_cols=305  Identities=34%  Similarity=0.501  Sum_probs=237.9

Q ss_pred             EcCCCCCcce--EEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC--CCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487            6 ITQPGSPEVL--QLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSRWKV   81 (325)
Q Consensus         6 ~~~~~~~~~l--~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (325)
                      .+..++++++  ++++.+.|+|+++||+|++.++++|++|++.+.|..+.  ....|..+|||++|+|+++|+++..+++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~   82 (319)
T cd08267           3 YTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKV   82 (319)
T ss_pred             eCCCCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCC
Confidence            3445555554  78888999999999999999999999999998876532  1123567899999999999999999999


Q ss_pred             CCEEEEEcC---CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHH
Q 020487           82 GDQVCALLG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQ  158 (325)
Q Consensus        82 Gd~V~~~~~---~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~  158 (325)
                      ||+|+.+..   .|+|++|+.++.+.++++|+++++.+++.++.++.+||+++....+++++++++|+|++|.+|+++++
T Consensus        83 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~  162 (319)
T cd08267          83 GDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQ  162 (319)
T ss_pred             CCEEEEeccCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHH
Confidence            999998863   58999999999999999999999999999999999999998777779999999999999999999999


Q ss_pred             HHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH--HHHHhhccccCCCEEEE
Q 020487          159 MGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFI  236 (325)
Q Consensus       159 ~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v~  236 (325)
                      +++..|++|++++.+ ++.+.++++|.+.+++.....+.   ...+.++++|++++|.++.  .....+..++++|+++.
T Consensus       163 la~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~  238 (319)
T cd08267         163 IAKALGAHVTGVCST-RNAELVRSLGADEVIDYTTEDFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVS  238 (319)
T ss_pred             HHHHcCCEEEEEeCH-HHHHHHHHcCCCEeecCCCCCcc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEE
Confidence            999999999998865 77788888998888876654443   4445566899999999853  23333445999999999


Q ss_pred             EeccCCcccccc---hHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHH
Q 020487          237 IGTQGGAKTELN---ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLME  313 (325)
Q Consensus       237 ~g~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~  313 (325)
                      +|..........   ..........+.......     .    .+.++.+.+++.++.+.+.+++.|++++++++++.+.
T Consensus       239 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~  309 (319)
T cd08267         239 VGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP-----N----AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLK  309 (319)
T ss_pred             eccccccccccccccchhhccccceEEEEEecC-----C----HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHh
Confidence            986543221111   001111112222221111     1    3345558889999998888889999999999999999


Q ss_pred             hCCCceeEEE
Q 020487          314 SSQHIGKIML  323 (325)
Q Consensus       314 ~~~~~gkvvi  323 (325)
                      +++..+|+++
T Consensus       310 ~~~~~~~vvv  319 (319)
T cd08267         310 SGRARGKVVI  319 (319)
T ss_pred             cCCCCCcEeC
Confidence            8887788764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=100.00  E-value=2.8e-33  Score=242.77  Aligned_cols=290  Identities=32%  Similarity=0.542  Sum_probs=241.9

Q ss_pred             CeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEcCCceeeeEEeecCCceee
Q 020487           28 DEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLP  107 (325)
Q Consensus        28 ~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~  107 (325)
                      +||+||+.++++|++|++...|..+   .+|.++|||++|+|+++|+++..+++||+|+++. .|+|++|+.++.+.+++
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~~---~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-~g~~~~~~~~~~~~~~~   76 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLLP---GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-PGAFATHVRVDARLVVK   76 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCCC---CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-cCcccceEEechhheEe
Confidence            5899999999999999999887653   2467899999999999999999999999999986 48899999999999999


Q ss_pred             CCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcC--C
Q 020487          108 VPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG--A  185 (325)
Q Consensus       108 ~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g--~  185 (325)
                      +|+++++.+++.++.+..+++.++.+...+++|++++|+|++|.+|++++++++..|++++++++++++.+.+++.+  +
T Consensus        77 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~  156 (293)
T cd05195          77 IPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPV  156 (293)
T ss_pred             CCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCCCc
Confidence            99999999999999999999999878788999999999998899999999999999999999999989998888887  6


Q ss_pred             CEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcc-cccchHHHHhhccEeeeccc
Q 020487          186 DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAK-TELNITSLFAKRLTVQAAGL  264 (325)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~i~~~~~  264 (325)
                      +.+++.....+...+.+.+.++++|++++|+|+..+...+++++++|+++.+|...... ....... +.+++.+....+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~  235 (293)
T cd05195         157 DHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDL  235 (293)
T ss_pred             ceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccchhh-hccCCeEEEEeH
Confidence            77887777677778888887778999999999988889999999999999998655321 1222222 335566665544


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487          265 RSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML  323 (325)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  323 (325)
                      ..... .......+.+..+.+++.++.+++..+..+++++++++++.+.+++..+|+++
T Consensus       236 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         236 DQLAR-ERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             HHHhh-hChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence            33211 11123345667788999999998878888999999999999998888788764

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=100.00  E-value=8.3e-33  Score=239.46  Aligned_cols=284  Identities=32%  Similarity=0.547  Sum_probs=236.0

Q ss_pred             EEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEcCCceeeeEEeecCCceeeCCCC
Q 020487           32 IKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSG  111 (325)
Q Consensus        32 v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~  111 (325)
                      ||+.++++|++|++...|.++.    |.++|+|++|+|+++|++++.+++||+|++++. |+|++|+.++.+.++++|++
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~~----~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-g~~~~~~~~~~~~~~~~p~~   76 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLPG----EAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAP-GSFATYVRTDARLVVPIPDG   76 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCCC----CCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcC-CceeeEEEccHHHeEECCCC
Confidence            7899999999999998886642    568999999999999999999999999999864 88999999999999999999


Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCC--CEEE
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA--DVCI  189 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~--~~~~  189 (325)
                      +++.+++.+.....+++.++.+...+.+|++++|+|++|.+|++++++++..|++|+++++++++.+.++++|+  +.++
T Consensus        77 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~  156 (288)
T smart00829       77 LSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGIPDDHIF  156 (288)
T ss_pred             CCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCChhhee
Confidence            99999999999999999998778889999999999988999999999999999999999999999999999998  6778


Q ss_pred             eCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCc-ccccchHHHHhhccEeeeccccccc
Q 020487          190 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLRSRS  268 (325)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~  268 (325)
                      +.....+.+.+.+.++++++|+++|++++..+...+++++++|+++.+|..... ....+... +.+++++.+..+....
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  235 (288)
T smart00829      157 SSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALE  235 (288)
T ss_pred             eCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhh
Confidence            777767777777777777899999999987788889999999999999865421 12233333 3456666665443221


Q ss_pred             chhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487          269 TENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML  323 (325)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  323 (325)
                      .  .+....+.++.+.+++.++.+.+...+.|++++++++++.+..++..+|+++
T Consensus       236 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      236 E--GPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             c--ChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence            1  1112334556688889999887766788999999999999998877778764

Enoylreductase in Polyketide synthases.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=1.2e-32  Score=237.76  Aligned_cols=232  Identities=22%  Similarity=0.320  Sum_probs=190.5

Q ss_pred             CCCCceeEEEEEecCCCC------CCCCCCEEEEEc----------------------------------CCceeeeEEe
Q 020487           60 YPGLECSGTILSVGKNVS------RWKVGDQVCALL----------------------------------GGGGYAEKVA   99 (325)
Q Consensus        60 ~~G~e~~G~V~~vG~~~~------~~~~Gd~V~~~~----------------------------------~~g~~~~~~~   99 (325)
                      ++|||++|+|+++|++++      .+++||||+...                                  .+|+|+||++
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            579999999999999998      899999996421                                  1489999999


Q ss_pred             ecCC-ceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhH
Q 020487          100 VPAG-QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKL  177 (325)
Q Consensus       100 ~~~~-~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~  177 (325)
                      +++. .++++|+++++++++.+++...++|+++. .....++++|+|+|+ |++|++++|+|+.+|++ |++++++++++
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~  158 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR  158 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            9997 79999999999999999999999999884 445669999999997 99999999999999996 88888899999


Q ss_pred             HHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCC-cccccchHHHHhh
Q 020487          178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAK  255 (325)
Q Consensus       178 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~  255 (325)
                      +.++++|++.+++...  ..+.+.+.+.+.++|++|||+|.. .+..++++++++|+++.+|.... ...+++...++.+
T Consensus       159 ~~a~~~Ga~~~i~~~~--~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~  236 (280)
T TIGR03366       159 ELALSFGATALAEPEV--LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRR  236 (280)
T ss_pred             HHHHHcCCcEecCchh--hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhC
Confidence            9999999998887543  244566667777899999999865 46888999999999999997543 3346677788889


Q ss_pred             ccEeeecccccccchhHHHHHHHHHHHHHHHHHCC--c--cccccccccchhhH
Q 020487          256 RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG--K--VKPVIYKYLPLCEA  305 (325)
Q Consensus       256 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~--l~~~~~~~~~l~~~  305 (325)
                      ++++.++.....          +.++++++++.++  +  ++.+++++|+|+|+
T Consensus       237 ~~~i~g~~~~~~----------~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       237 WLTIRGVHNYEP----------RHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             CcEEEecCCCCH----------HHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            999999754321          1234477888764  3  44678999999874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=5.9e-31  Score=226.09  Aligned_cols=237  Identities=39%  Similarity=0.645  Sum_probs=203.8

Q ss_pred             eEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEc-------------------
Q 020487           29 EVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL-------------------   89 (325)
Q Consensus        29 ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~-------------------   89 (325)
                      ||+|++.++++|++|+..+.|..+.....|.++|+|++|+|+++|++++.|++||+|+++.                   
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~   80 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI   80 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence            6899999999999999999887652334477899999999999999999999999999875                   


Q ss_pred             ----CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC
Q 020487           90 ----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV  165 (325)
Q Consensus        90 ----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~  165 (325)
                          ..|+|++|+.++.+.++++|+++++++++.++.++.+||.++.....+.++++++|+|+++ +|++++++++..|.
T Consensus        81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~  159 (271)
T cd05188          81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGA  159 (271)
T ss_pred             eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCC
Confidence                2589999999999999999999999999999999999999997777779999999999966 99999999999999


Q ss_pred             EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcc
Q 020487          166 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAK  244 (325)
Q Consensus       166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~  244 (325)
                      +|+++++++++.+.++++|++.+++.........+. ...++++|++++|++. ......+++++++|+++.+|......
T Consensus       160 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~  238 (271)
T cd05188         160 RVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGP  238 (271)
T ss_pred             eEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCCC
Confidence            999999999999999999988888877766666665 5666789999999998 67788899999999999998766433


Q ss_pred             cccchHHHHhhccEeeecccccc
Q 020487          245 TELNITSLFAKRLTVQAAGLRSR  267 (325)
Q Consensus       245 ~~~~~~~~~~~~~~i~~~~~~~~  267 (325)
                      ........+.+++++.++.....
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~  261 (271)
T cd05188         239 PLDDLRRLLFKELTIIGSTGGTR  261 (271)
T ss_pred             CcccHHHHHhcceEEEEeecCCH
Confidence            22334556778999988866543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=100.00  E-value=2e-30  Score=211.79  Aligned_cols=302  Identities=20%  Similarity=0.270  Sum_probs=238.1

Q ss_pred             cceEEEeec---CCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCC----ceeEEEEEecCCCCCCCCCCEE
Q 020487           13 EVLQLQEVE---DPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGL----ECSGTILSVGKNVSRWKVGDQV   85 (325)
Q Consensus        13 ~~l~~~~~~---~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~----e~~G~V~~vG~~~~~~~~Gd~V   85 (325)
                      +++.++...   ..++.+++|+||.+|-+..|.-...+.-..+..-..|+.||-    .++|+|++  +..+.+++||.|
T Consensus        20 ~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v   97 (343)
T KOG1196|consen   20 SDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLV   97 (343)
T ss_pred             ccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceE
Confidence            345544333   344689999999999999887665554433332112333332    67899998  566789999999


Q ss_pred             EEEcCCceeeeEEeecCCc--eeeC--CCCCCHHhh-ccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487           86 CALLGGGGYAEKVAVPAGQ--VLPV--PSGVSLKDA-AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG  160 (325)
Q Consensus        86 ~~~~~~g~~~~~~~~~~~~--~~~~--p~~~~~~~a-a~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a  160 (325)
                      +++.   +|.+|.+++++.  .+++  |.+.++... ..+.++..|||.++.+....++|++++|-||+|++|..+.|+|
T Consensus        98 ~g~~---gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~A  174 (343)
T KOG1196|consen   98 WGIV---GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFA  174 (343)
T ss_pred             EEec---cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHH
Confidence            9995   699999997753  3443  345555543 3688999999999999999999999999999999999999999


Q ss_pred             HHCCCEEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEec
Q 020487          161 KCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       161 ~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      +.+|++|+.++-++++...++ ++|.+..+|+.++.......+....+++|+.||.+|+..+...+..|+..||++.+|.
T Consensus       175 k~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~  254 (343)
T KOG1196|consen  175 KLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGM  254 (343)
T ss_pred             HhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeee
Confidence            999999999999999999887 6899999999988444444445666799999999999999999999999999999998


Q ss_pred             cCCcccc-----cchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHh
Q 020487          240 QGGAKTE-----LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMES  314 (325)
Q Consensus       240 ~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~  314 (325)
                      ......+     .+....+.|++++.++......+     .+...++++..++++|++.-.-+..-.|+..+.||.-|.+
T Consensus       255 ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d-----~~~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf~  329 (343)
T KOG1196|consen  255 ISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLD-----KYPKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLFH  329 (343)
T ss_pred             ehhccccCCccccchhhheeeeEEeeeEEeechhh-----hhHHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHhc
Confidence            7743222     23456677899999976544432     2356677799999999998877777789999999999999


Q ss_pred             CCCceeEEEe
Q 020487          315 SQHIGKIMLV  324 (325)
Q Consensus       315 ~~~~gkvvi~  324 (325)
                      +++.||-++.
T Consensus       330 GkNvGKqiv~  339 (343)
T KOG1196|consen  330 GKNVGKQLVK  339 (343)
T ss_pred             cCcccceEEE
Confidence            9999998775

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.97  E-value=1.1e-30  Score=243.70  Aligned_cols=300  Identities=26%  Similarity=0.355  Sum_probs=255.2

Q ss_pred             CCCcceEEEeecCC---CCCCCeEEEEEeeeecChhhhhhhhCCCCCCC------CCCCCCCCceeEEEEEecCCCCCCC
Q 020487           10 GSPEVLQLQEVEDP---QIKDDEVLIKVEATALNRADTLQRKGSYPPPK------GASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus        10 ~~~~~l~~~~~~~~---~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~------~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |+...+++.+.|..   +..++.=+..|.|++||-.|++...|+.+.+.      .....+|-||+|+          .+
T Consensus      1424 GDlsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~ 1493 (2376)
T KOG1202|consen 1424 GDLSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DA 1493 (2376)
T ss_pred             ccccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cC
Confidence            45566888777754   23677778999999999999999999886532      1245678888886          57


Q ss_pred             CCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG  160 (325)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a  160 (325)
                      -|.||+++..-.++++.+.++.+.+|.+|++..+++|++.|+.+.|+|+||..+...++|++|||++++|++|.+++.+|
T Consensus      1494 ~GrRvM~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiA 1573 (2376)
T KOG1202|consen 1494 SGRRVMGMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIA 1573 (2376)
T ss_pred             CCcEEEEeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHH
Confidence            79999999988899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHCCCEEEEEecChhhHHHHHH----cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEE
Q 020487          161 KCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI  236 (325)
Q Consensus       161 ~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~  236 (325)
                      ..+|++|+-++.++++++++++    +...++-|+.+.+|...+...++++|+|+|++....+.++..++||.-+|||..
T Consensus      1574 La~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLE 1653 (2376)
T KOG1202|consen 1574 LAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLE 1653 (2376)
T ss_pred             HHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeee
Confidence            9999999999999999998874    456677788899999999999999999999999999999999999999999999


Q ss_pred             EeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHC----CccccccccccchhhHHHHHHHH
Q 020487          237 IGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV----GKVKPVIYKYLPLCEAAEAHQLM  312 (325)
Q Consensus       237 ~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~l~~~~~~~~~l~~~~~a~~~~  312 (325)
                      +|--.-+.-.......+.+|.+++|..+.+....+ .    +++.+++.++.+    |...|+.+++|+-+++++||++|
T Consensus      1654 IGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege-~----e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfM 1728 (2376)
T KOG1202|consen 1654 IGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGE-E----EMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFM 1728 (2376)
T ss_pred             ecceecccCCcchhhhhhcccceeeeehhhhhcCc-H----HHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHH
Confidence            98644332233345567799999999888765422 2    233335555555    55888999999999999999999


Q ss_pred             HhCCCceeEEEe
Q 020487          313 ESSQHIGKIMLV  324 (325)
Q Consensus       313 ~~~~~~gkvvi~  324 (325)
                      .+++.+||+|+.
T Consensus      1729 asGKHIGKVvik 1740 (2376)
T KOG1202|consen 1729 ASGKHIGKVVIK 1740 (2376)
T ss_pred             hccCccceEEEE
Confidence            999999999985

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.97  E-value=1.8e-28  Score=211.70  Aligned_cols=251  Identities=27%  Similarity=0.401  Sum_probs=198.7

Q ss_pred             CCCCCCCceeEEEEEecCCCCCCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcC
Q 020487           57 ASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH  136 (325)
Q Consensus        57 ~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~  136 (325)
                      +|.++|||++|+|+++|++++.+++||+|+++   +.|++|+.++.+.++++|++++..+++.+ ..+++||+++ ...+
T Consensus        20 ~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~---~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~   94 (277)
T cd08255          20 LPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF---GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAE   94 (277)
T ss_pred             CCcccCcceeEEEEEeCCCCCCCCCCCEEEec---CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcC
Confidence            57899999999999999999999999999998   46999999999999999999999998888 7899999997 4788


Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcC-CCEEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLG-ADVCINYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      ++++++++|+|+ |.+|++++++|+.+|++ |+++++++++.+.++++| ++.+++...        ..+.++++|++|+
T Consensus        95 ~~~g~~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~~d~vl~  165 (277)
T cd08255          95 PRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTA--------DEIGGRGADVVIE  165 (277)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccch--------hhhcCCCCCEEEE
Confidence            999999999985 99999999999999998 999999999999888888 455543322        1224557999999


Q ss_pred             CCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhH-H-HHHHHHHHHHHHHHHCCc
Q 020487          215 CMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK-A-LIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       215 ~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~g~  291 (325)
                      |++. ..+...+++++++|+++.+|..... .......+..+++++.+..+........ . ....+.++++.+++.++.
T Consensus       166 ~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  244 (277)
T cd08255         166 ASGSPSALETALRLLRDRGRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGR  244 (277)
T ss_pred             ccCChHHHHHHHHHhcCCcEEEEEeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCC
Confidence            9875 5568889999999999999876543 2222233444666777766543321110 0 112345566889999999


Q ss_pred             cccccccccchhhHHHHHHHHHhC-CCceeEE
Q 020487          292 VKPVIYKYLPLCEAAEAHQLMESS-QHIGKIM  322 (325)
Q Consensus       292 l~~~~~~~~~l~~~~~a~~~~~~~-~~~gkvv  322 (325)
                      +++.+.+.|+++++++|++.+.++ ....|++
T Consensus       245 l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~  276 (277)
T cd08255         245 LEALITHRVPFEDAPEAYRLLFEDPPECLKVV  276 (277)
T ss_pred             ccccccCccCHHHHHHHHHHHHcCCccceeee
Confidence            888788999999999999999877 3345665

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.74  E-value=7.6e-18  Score=123.95  Aligned_cols=82  Identities=40%  Similarity=0.618  Sum_probs=69.8

Q ss_pred             CCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEc-----------------
Q 020487           27 DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL-----------------   89 (325)
Q Consensus        27 ~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~-----------------   89 (325)
                      |+||+||+.++|||++|++.+.|.......+|.++|||++|+|+++|+++++|++||+|+...                 
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~   80 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL   80 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence            689999999999999999999996544556799999999999999999999999999998632                 


Q ss_pred             ----------CCceeeeEEeecCCceeeC
Q 020487           90 ----------GGGGYAEKVAVPAGQVLPV  108 (325)
Q Consensus        90 ----------~~g~~~~~~~~~~~~~~~~  108 (325)
                                .+|+|++|+++++++++++
T Consensus        81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred             CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence                      2589999999999998874

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.74  E-value=5.9e-17  Score=123.41  Aligned_cols=116  Identities=41%  Similarity=0.738  Sum_probs=108.1

Q ss_pred             hHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC-hHHHHHhhcccc
Q 020487          151 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLN  229 (325)
Q Consensus       151 ~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g-~~~~~~~~~~l~  229 (325)
                      ++|++++|+|+..|++|+++++++++++.++++|++++++++..++.+.+++.+++.++|++|||+| ...+..++++++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~   80 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLLR   80 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHEE
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHhc
Confidence            5899999999999999999999999999999999999999999999999999999889999999999 677899999999


Q ss_pred             CCCEEEEEeccCCcccccchHHHHhhccEeeeccccc
Q 020487          230 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRS  266 (325)
Q Consensus       230 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~  266 (325)
                      ++|+++.+|........++...++.+++++.++....
T Consensus        81 ~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~  117 (130)
T PF00107_consen   81 PGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGS  117 (130)
T ss_dssp             EEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGG
T ss_pred             cCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCC
Confidence            9999999999886667888999999999999997765

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.56  E-value=1.5e-14  Score=109.59  Aligned_cols=124  Identities=35%  Similarity=0.498  Sum_probs=82.0

Q ss_pred             cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC--hHHH-HHhhccccCCCEEEEEeccCCcccccchHHHHhhccEe
Q 020487          183 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMG--ASYF-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTV  259 (325)
Q Consensus       183 ~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g--~~~~-~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i  259 (325)
                      ||+++++|++..++       .+.+++|+||||+|  .+.+ ..++++| ++|+++.++.      .........+...+
T Consensus         1 LGAd~vidy~~~~~-------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~------~~~~~~~~~~~~~~   66 (127)
T PF13602_consen    1 LGADEVIDYRDTDF-------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG------DLPSFARRLKGRSI   66 (127)
T ss_dssp             CT-SEEEETTCSHH-------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S------HHHHHHHHHHCHHC
T ss_pred             CCcCEEecCCCccc-------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC------cccchhhhhcccce
Confidence            68999999997665       55568999999999  6665 6777888 9999999974      11111111223333


Q ss_pred             eecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487          260 QAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML  323 (325)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  323 (325)
                      ....+......   ...++.++++.+++.+|++++.+.++||++++++|++.+++++..||+|+
T Consensus        67 ~~~~~~~~~~~---~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   67 RYSFLFSVDPN---AIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             EEECCC-H--H---HHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             EEEEEEecCCC---chHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            33333221110   22345577799999999999999999999999999999999999999986

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.40  E-value=3.4e-11  Score=107.41  Aligned_cols=174  Identities=15%  Similarity=0.136  Sum_probs=129.9

Q ss_pred             HHHHHhhcC-CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCC
Q 020487          128 WSTVFMTSH-LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       128 ~~~l~~~~~-~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  206 (325)
                      +.++.+..+ .-+|++|+|.|+ |.+|+.+++.++.+|++|++++.++.+.+.++.+|++.+ +     .    .+..  
T Consensus       189 ~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~-----~----~e~v--  255 (413)
T cd00401         189 IDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-T-----M----EEAV--  255 (413)
T ss_pred             HHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-c-----H----HHHH--
Confidence            344444433 368999999998 999999999999999999999999999999999998433 1     1    1222  


Q ss_pred             CcccEEEeCCChHH-HHH-hhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccc-hhHHHHHHHHHHHH
Q 020487          207 KGVDVILDCMGASY-FQR-NLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRST-ENKALIVSEVEKNV  283 (325)
Q Consensus       207 ~~~d~vi~~~g~~~-~~~-~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~  283 (325)
                      +++|++|+|+|... +.. .++.++++|.++.+|..   ...++...+..+++++.++....... .+.        ...
T Consensus       256 ~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~---~~eId~~~L~~~el~i~g~~~~~~~~~~~~--------g~a  324 (413)
T cd00401         256 KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF---DVEIDVKGLKENAVEVVNIKPQVDRYELPD--------GRR  324 (413)
T ss_pred             cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC---CCccCHHHHHhhccEEEEccCCcceEEcCC--------cch
Confidence            25899999999765 444 48999999999999853   34677888888889888876543211 110        027


Q ss_pred             HHHHHCCcc---ccccccc-----cchh-hHHHHHHHHHhCCCc-eeEEEeC
Q 020487          284 WPAIAVGKV---KPVIYKY-----LPLC-EAAEAHQLMESSQHI-GKIMLVP  325 (325)
Q Consensus       284 ~~~~~~g~l---~~~~~~~-----~~l~-~~~~a~~~~~~~~~~-gkvvi~~  325 (325)
                      ++++.+|.+   ...+++.     ++++ ++.++++.+.+++.. .|+++.|
T Consensus       325 I~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p  376 (413)
T cd00401         325 IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP  376 (413)
T ss_pred             hhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence            889999987   4456777     8899 999999999876543 5777765

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.34  E-value=2.1e-11  Score=111.41  Aligned_cols=126  Identities=17%  Similarity=0.202  Sum_probs=95.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEE-EeCCCc-------------hHHHHHHH
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTE-------------DFVARVKE  202 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~-------------~~~~~~~~  202 (325)
                      ..++++|+|+|+ |.+|+++++.|+.+|++|++++.++++++.++++|++.+ ++..+.             .+.+...+
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            457999999999 999999999999999999999999999999999999854 443221             12222222


Q ss_pred             HhCC--CcccEEEeCCChH------H-HHHhhccccCCCEEEEEeccCCcc--cccchHHHHh-hccEeeecc
Q 020487          203 ETGG--KGVDVILDCMGAS------Y-FQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFA-KRLTVQAAG  263 (325)
Q Consensus       203 ~~~~--~~~d~vi~~~g~~------~-~~~~~~~l~~~g~~v~~g~~~~~~--~~~~~~~~~~-~~~~i~~~~  263 (325)
                      .+.+  +++|++|+|++.+      . +..+++.++++|+++++|...+..  .+.+..+++. +++++.|..
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~  313 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYT  313 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeC
Confidence            2221  4799999999852      3 488999999999999998753332  3344445554 789998875

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.70  E-value=4.9e-07  Score=82.89  Aligned_cols=149  Identities=20%  Similarity=0.262  Sum_probs=97.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEE-eCCC-------------chHHHHHHHH
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-NYKT-------------EDFVARVKEE  203 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~-------------~~~~~~~~~~  203 (325)
                      .++++++|+|+ |.+|+++++.++.+|++|++++.+.++++.++.+|++.+. +..+             ..+.+...+.
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            46789999998 9999999999999999999999999999999999987633 2211             1222222222


Q ss_pred             hC--CCcccEEEeCC---ChH----HHHHhhccccCCCEEEEEeccCCcccccc-hHHHH--hhccEeeecc-cccccch
Q 020487          204 TG--GKGVDVILDCM---GAS----YFQRNLGSLNIDGRLFIIGTQGGAKTELN-ITSLF--AKRLTVQAAG-LRSRSTE  270 (325)
Q Consensus       204 ~~--~~~~d~vi~~~---g~~----~~~~~~~~l~~~g~~v~~g~~~~~~~~~~-~~~~~--~~~~~i~~~~-~~~~~~~  270 (325)
                      +.  .+++|++|+|+   |.+    .....++.|++|+.+|+++...+...... +.+.+  ..++++.+.. +.+....
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~nlPs~~p~  320 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYTDLPSRLPT  320 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeCCccccCHH
Confidence            22  24699999999   542    25778999999999999976554322211 12222  1347777663 3444444


Q ss_pred             hHHHHHHHHHHHHHHHH
Q 020487          271 NKALIVSEVEKNVWPAI  287 (325)
Q Consensus       271 ~~~~~~~~~~~~~~~~~  287 (325)
                      .....+.+.+-..+..+
T Consensus       321 ~AS~l~s~nl~~~l~~l  337 (511)
T TIGR00561       321 QSSQLYGTNLVNLLKLL  337 (511)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            44444555443334333

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.63  E-value=6.8e-06  Score=71.20  Aligned_cols=133  Identities=20%  Similarity=0.293  Sum_probs=92.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .+.+++|+|. |.+|..+++.++.+|++|+++.++.++.++++.+|+..+.       ...+.+...  .+|+||+|++.
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~-------~~~l~~~l~--~aDiVI~t~p~  220 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPFH-------LSELAEEVG--KIDIIFNTIPA  220 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeec-------HHHHHHHhC--CCCEEEECCCh
Confidence            5899999998 9999999999999999999999998888888888865331       123334433  68999999986


Q ss_pred             HHH-HHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeec-cccccc-chhHHHHHHHHHHHHH
Q 020487          219 SYF-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAA-GLRSRS-TENKALIVSEVEKNVW  284 (325)
Q Consensus       219 ~~~-~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~-~~~~~~~~~~~~~~~~  284 (325)
                      ..+ ...++.+++++.+++++...+. ..+  .....++++..+. .+.... .......+.+.+..++
T Consensus       221 ~~i~~~~l~~~~~g~vIIDla~~pgg-td~--~~a~~~Gv~~~~~~~lpg~vap~ta~~~~~~~i~~~l  286 (296)
T PRK08306        221 LVLTKEVLSKMPPEALIIDLASKPGG-TDF--EYAEKRGIKALLAPGLPGKVAPKTAGQILANVLSQLL  286 (296)
T ss_pred             hhhhHHHHHcCCCCcEEEEEccCCCC-cCe--eehhhCCeEEEEECCCCccCCHHHHHHHHHHHHHHHH
Confidence            544 5667889999999999766543 222  2334456666643 333332 3344444555444444

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.48  E-value=7.9e-07  Score=76.44  Aligned_cols=167  Identities=17%  Similarity=0.176  Sum_probs=98.4

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHHH----cCCCEEEeCCCchHHHHHHHH-hCCC
Q 020487          135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEE-TGGK  207 (325)
Q Consensus       135 ~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~-~~~~  207 (325)
                      +.++++++||.+|+ |. |..+.++++..|.  +|++++.+++..+.+++    .+...+.. ...    .+.+. ....
T Consensus        73 ~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~-~~~----d~~~l~~~~~  145 (272)
T PRK11873         73 AELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEF-RLG----EIEALPVADN  145 (272)
T ss_pred             ccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEE-EEc----chhhCCCCCC
Confidence            46789999999998 65 8888888887764  69999999998887765    33322210 011    11221 1234


Q ss_pred             cccEEEeCC------C-hHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHH
Q 020487          208 GVDVILDCM------G-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE  280 (325)
Q Consensus       208 ~~d~vi~~~------g-~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  280 (325)
                      .||+|+...      . ...+..+.+.|+|||+++..+......  .+  ....+...+.+........  .    .+  
T Consensus       146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~--~----~e--  213 (272)
T PRK11873        146 SVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGE--LP--EEIRNDAELYAGCVAGALQ--E----EE--  213 (272)
T ss_pred             ceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCC--CC--HHHHHhHHHHhccccCCCC--H----HH--
Confidence            799998543      1 234788899999999999876544321  11  1122222222111111111  1    11  


Q ss_pred             HHHHHHHHCCccc---cccccccchhhHHHHHHHH--HhCCCceeEE
Q 020487          281 KNVWPAIAVGKVK---PVIYKYLPLCEAAEAHQLM--ESSQHIGKIM  322 (325)
Q Consensus       281 ~~~~~~~~~g~l~---~~~~~~~~l~~~~~a~~~~--~~~~~~gkvv  322 (325)
                        ..+++.+..+.   ......+++++..++++.+  .+++..++.+
T Consensus       214 --~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  258 (272)
T PRK11873        214 --YLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYI  258 (272)
T ss_pred             --HHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceE
Confidence              44555553333   3345678899999999988  5555444444

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.29  E-value=2.5e-05  Score=69.89  Aligned_cols=147  Identities=12%  Similarity=0.168  Sum_probs=93.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC-
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-  217 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g-  217 (325)
                      +.+++|+|+ |.+|+.+++.++.+|++|++++++.++.+.+. .++.........   ...+.+...  .+|++|+|++ 
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~---~~~l~~~l~--~aDvVI~a~~~  240 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSN---AYEIEDAVK--RADLLIGAVLI  240 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCC---HHHHHHHHc--cCCEEEEcccc
Confidence            455999998 99999999999999999999999888877665 445432222221   223344443  6899999973 


Q ss_pred             --h--HH--HHHhhccccCCCEEEEEeccCCcccccc-hH-----HHHhhccEeeec-ccccccchhHHHHHHH-HHHHH
Q 020487          218 --A--SY--FQRNLGSLNIDGRLFIIGTQGGAKTELN-IT-----SLFAKRLTVQAA-GLRSRSTENKALIVSE-VEKNV  283 (325)
Q Consensus       218 --~--~~--~~~~~~~l~~~g~~v~~g~~~~~~~~~~-~~-----~~~~~~~~i~~~-~~~~~~~~~~~~~~~~-~~~~~  283 (325)
                        .  +.  ....++.+++++.++.++...+...... .+     .+...++...+. ++......+....+.+ ++..+
T Consensus       241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~~e~~~~t~~d~p~~~~~Gv~~~~v~nlP~~~p~~aS~~~~~~l~~~l  320 (370)
T TIGR00518       241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGCVETSRPTTHDQPTYAVHDVVHYCVANMPGAVPKTSTYALTNATMPYV  320 (370)
T ss_pred             CCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCCccCCcCCCCCCCEEEECCeEEEEeCCcccccHHHHHHHHHHHHHHHH
Confidence              2  21  3667788999999999876554321111 11     122345666666 5555555555554444 44555


Q ss_pred             HHHHHCCcc
Q 020487          284 WPAIAVGKV  292 (325)
Q Consensus       284 ~~~~~~g~l  292 (325)
                      ..+..+|.+
T Consensus       321 ~~~~~~g~~  329 (370)
T TIGR00518       321 LELANHGWR  329 (370)
T ss_pred             HHHHhcccc
Confidence            566666644

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=98.25  E-value=0.00021  Score=61.46  Aligned_cols=253  Identities=14%  Similarity=0.044  Sum_probs=138.5

Q ss_pred             hhCCCCC-CCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEcCCc---------------------------eeeeEE
Q 020487           47 RKGSYPP-PKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGG---------------------------GYAEKV   98 (325)
Q Consensus        47 ~~g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g---------------------------~~~~~~   98 (325)
                      +...+|. ...+-.+|--.+ ++|++  |+++++.+|.||+++-.-+                           .|.+|.
T Consensus        19 YW~ffP~~~~~wG~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~   95 (314)
T PF11017_consen   19 YWDFFPASDDGWGIVPVWGF-ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYL   95 (314)
T ss_pred             cceeccCCcccCcccccceE-EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhcee
Confidence            3344444 233333444434 77777  8999999999999875321                           234444


Q ss_pred             eecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhc---CCCCCCEEEEEcCCchHHHHHHHHHH-HC-CCEEEEEecC
Q 020487           99 AVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS---HLSPGESFLVHGGSSGIGTFAIQMGK-CQ-GVRVFVTAGS  173 (325)
Q Consensus        99 ~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~---~~~~~~~vli~g~~g~~G~~~~~~a~-~~-g~~v~~~~~~  173 (325)
                      ++..+..+.   .-....-+.+...+.|.|..- +..   ..-..+.|+|..|++-.++.++..++ .. +.+++.++ |
T Consensus        96 r~~~d~~y~---~~~e~~~~LlrPLf~Tsfll~-d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S  170 (314)
T PF11017_consen   96 RVSADPAYD---PEREDWQMLLRPLFITSFLLD-DFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-S  170 (314)
T ss_pred             ecCCCcccC---cchhHHHHHHHHHHHHHHHHH-HHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-c
Confidence            444333221   112233456777788888642 221   12345788999999999999999998 33 45899988 6


Q ss_pred             hhhHHHHHHcCC-CEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHH-HHhhccccCCC-EEEEEeccCCcccccchH
Q 020487          174 EEKLAVCKDLGA-DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDG-RLFIIGTQGGAKTELNIT  250 (325)
Q Consensus       174 ~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~-~~~~~~l~~~g-~~v~~g~~~~~~~~~~~~  250 (325)
                      +......+.+|. +.++.+++-      ..... ..--+++|..|+..+ ..+-+.+...- ..+.+|....+.... ..
T Consensus       171 ~~N~~Fve~lg~Yd~V~~Yd~i------~~l~~-~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~-~~  242 (314)
T PF11017_consen  171 ARNVAFVESLGCYDEVLTYDDI------DSLDA-PQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEA-PA  242 (314)
T ss_pred             CcchhhhhccCCceEEeehhhh------hhccC-CCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCc-cc
Confidence            677778888885 667765542      22211 245789999998654 44445555543 455566544322110 00


Q ss_pred             HHHhhccEeeecc----cccccchhHHHHHHHHHHHHHHHHHCCccc-cccccccchhhHHHHHHHHHhCCC
Q 020487          251 SLFAKRLTVQAAG----LRSRSTENKALIVSEVEKNVWPAIAVGKVK-PVIYKYLPLCEAAEAHQLMESSQH  317 (325)
Q Consensus       251 ~~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~-~~~~~~~~l~~~~~a~~~~~~~~~  317 (325)
                      .+  .+.+-..++    +..+....-...+.+.....+..+.+.... ..+..+-..+.+.++++.+.+++.
T Consensus       243 ~l--~g~~~~~FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~~~wl~~~~~~G~ea~~~~y~~l~~G~v  312 (314)
T PF11017_consen  243 DL--PGPRPEFFFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADAQPWLKVEEVAGPEAVEAAYQDLLAGKV  312 (314)
T ss_pred             cC--CCCCcEEEeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhcCcEEEEEecCHHHHHHHHHHHhcCCC
Confidence            00  000111111    111111111112222222233222222222 235688899999999999988764

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.22  E-value=2.2e-05  Score=70.80  Aligned_cols=103  Identities=17%  Similarity=0.166  Sum_probs=76.9

Q ss_pred             HHHHHHhhcCCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhC
Q 020487          127 VWSTVFMTSHLS-PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG  205 (325)
Q Consensus       127 a~~~l~~~~~~~-~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  205 (325)
                      +|.++.+...+. .|++++|+|. |.+|..+++.++.+|++|+++++++.+...+...|+. +.+     .    .+.. 
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~~-----l----~eal-  265 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFR-VMT-----M----EEAA-  265 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCE-ecC-----H----HHHH-
Confidence            455554443444 7999999998 9999999999999999999999888776666555654 221     1    1222 


Q ss_pred             CCcccEEEeCCChHH-HH-HhhccccCCCEEEEEeccCC
Q 020487          206 GKGVDVILDCMGASY-FQ-RNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       206 ~~~~d~vi~~~g~~~-~~-~~~~~l~~~g~~v~~g~~~~  242 (325)
                       +++|++|+|+|... +. ..+..+++++.++..|....
T Consensus       266 -~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~  303 (425)
T PRK05476        266 -ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN  303 (425)
T ss_pred             -hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence             26899999999765 43 57889999999999886553

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=98.08  E-value=2.3e-05  Score=63.00  Aligned_cols=119  Identities=21%  Similarity=0.177  Sum_probs=83.2

Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH----HHHHHcCCCE
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL----AVCKDLGADV  187 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~----~~~~~~g~~~  187 (325)
                      ++....-++..+.+.|..  .+...++++++||-+|+  +.|+.++-+++..| +|+.+.+.++-.    ..++.+|...
T Consensus        47 lpi~~gqtis~P~~vA~m--~~~L~~~~g~~VLEIGt--GsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~n  121 (209)
T COG2518          47 LPIGCGQTISAPHMVARM--LQLLELKPGDRVLEIGT--GSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYEN  121 (209)
T ss_pred             ccCCCCceecCcHHHHHH--HHHhCCCCCCeEEEECC--CchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCc
Confidence            333344455555566653  36778999999999995  56999999999888 999999888733    3455688754


Q ss_pred             EEeCCCchHHHHHHHHhCCCcccEEEeCCChHHH-HHhhccccCCCEEEEEec
Q 020487          188 CINYKTEDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~g~  239 (325)
                      +.....+..    .-+....+||.|+-+.+.+.. ..++++|++||+++.--+
T Consensus       122 V~v~~gDG~----~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG  170 (209)
T COG2518         122 VTVRHGDGS----KGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG  170 (209)
T ss_pred             eEEEECCcc----cCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence            433222221    112233589999988887765 677899999999987643

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=98.08  E-value=0.00048  Score=59.42  Aligned_cols=109  Identities=18%  Similarity=0.265  Sum_probs=77.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+++|+|. |.+|.++++.++.+|++|++..++.++.+.+.+.+...+ .      ...+.+...  .+|++++|++.
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~-~------~~~l~~~l~--~aDiVint~P~  219 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPF-P------LNKLEEKVA--EIDIVINTIPA  219 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeee-c------HHHHHHHhc--cCCEEEECCCh
Confidence            3789999998 999999999999999999999999887777666664322 1      122333333  68999999986


Q ss_pred             HHH-HHhhccccCCCEEEEEeccCCcccccchHHHHhhccEee
Q 020487          219 SYF-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ  260 (325)
Q Consensus       219 ~~~-~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~  260 (325)
                      ..+ ...++.++++..++.++...+   ..++......++...
T Consensus       220 ~ii~~~~l~~~k~~aliIDlas~Pg---~tdf~~Ak~~G~~a~  259 (287)
T TIGR02853       220 LVLTADVLSKLPKHAVIIDLASKPG---GTDFEYAKKRGIKAL  259 (287)
T ss_pred             HHhCHHHHhcCCCCeEEEEeCcCCC---CCCHHHHHHCCCEEE
Confidence            543 456778899888898876443   233333334455544

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.04  E-value=7.8e-05  Score=66.87  Aligned_cols=101  Identities=17%  Similarity=0.184  Sum_probs=74.8

Q ss_pred             HHHHHhhcC-CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCC
Q 020487          128 WSTVFMTSH-LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       128 ~~~l~~~~~-~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  206 (325)
                      +.++.+..+ ...|++++|.|. |.+|..+++.++.+|++|+++..++.+...+...|+. +.+     . .   +..  
T Consensus       182 ~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----l-e---eal--  248 (406)
T TIGR00936       182 IDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFR-VMT-----M-E---EAA--  248 (406)
T ss_pred             HHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCE-eCC-----H-H---HHH--
Confidence            344434333 367999999998 9999999999999999999998887776666666663 321     1 1   112  


Q ss_pred             CcccEEEeCCChHH-HH-HhhccccCCCEEEEEeccC
Q 020487          207 KGVDVILDCMGASY-FQ-RNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       207 ~~~d~vi~~~g~~~-~~-~~~~~l~~~g~~v~~g~~~  241 (325)
                      ++.|++|++.|... +. ..+..+++++.++..|...
T Consensus       249 ~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       249 KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence            25799999999866 33 4788999999999987653

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PLN02494 adenosylhomocysteinase

Probab=98.00  E-value=8.2e-05  Score=67.42  Aligned_cols=101  Identities=15%  Similarity=0.151  Sum_probs=76.1

Q ss_pred             HHHHHhhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCC
Q 020487          128 WSTVFMTSHL-SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       128 ~~~l~~~~~~-~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  206 (325)
                      +-++.+..++ -.|++++|.|. |.+|..+++.++.+|++|+++.+++.+...+...|+..+ +     ..    +..  
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv-~-----le----Eal--  307 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL-T-----LE----DVV--  307 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec-c-----HH----HHH--
Confidence            3344344333 56999999998 999999999999999999999988777666666676532 1     11    122  


Q ss_pred             CcccEEEeCCChHH--HHHhhccccCCCEEEEEeccC
Q 020487          207 KGVDVILDCMGASY--FQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       207 ~~~d~vi~~~g~~~--~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      +..|++++|.|...  ....++.|++++.++.+|...
T Consensus       308 ~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~  344 (477)
T PLN02494        308 SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD  344 (477)
T ss_pred             hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence            15799999999765  377899999999999998743

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.93  E-value=7.2e-05  Score=62.91  Aligned_cols=81  Identities=25%  Similarity=0.397  Sum_probs=59.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcC----CC-EEE--eCCCchHHHHHHHHhCC--C
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG----AD-VCI--NYKTEDFVARVKEETGG--K  207 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g----~~-~~~--~~~~~~~~~~~~~~~~~--~  207 (325)
                      ..+.+++|+||++++|...+..+...|++|+.+.|++++++.+. ++.    .. .++  |..+......+.+....  .
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            45789999999999999999999999999999999999987765 332    11 233  44444444444443332  3


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      .+|+.++++|.
T Consensus        84 ~IdvLVNNAG~   94 (265)
T COG0300          84 PIDVLVNNAGF   94 (265)
T ss_pred             cccEEEECCCc
Confidence            79999999984

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.88  E-value=0.00047  Score=58.44  Aligned_cols=142  Identities=18%  Similarity=0.258  Sum_probs=90.7

Q ss_pred             CCCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHH
Q 020487           77 SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFA  156 (325)
Q Consensus        77 ~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~  156 (325)
                      ..+++||+++..+   +|.+|.. +...++.+++++++..+. -+.. ..+...+..  .+.++.+||-+|+ |. |..+
T Consensus        65 ~p~~~g~~~~i~p---~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt-~~~l~~l~~--~~~~~~~VLDiGc-Gs-G~l~  134 (250)
T PRK00517         65 HPIRIGDRLWIVP---SWEDPPD-PDEINIELDPGMAFGTGT-HPTT-RLCLEALEK--LVLPGKTVLDVGC-GS-GILA  134 (250)
T ss_pred             CCEEEcCCEEEEC---CCcCCCC-CCeEEEEECCCCccCCCC-CHHH-HHHHHHHHh--hcCCCCEEEEeCC-cH-HHHH
Confidence            3478899888774   3666644 667788888888877654 1111 112222322  2468899999998 54 8777


Q ss_pred             HHHHHHCCC-EEEEEecChhhHHHHHHc----CC-CEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH----HHHhhc
Q 020487          157 IQMGKCQGV-RVFVTAGSEEKLAVCKDL----GA-DVCINYKTEDFVARVKEETGGKGVDVILDCMGASY----FQRNLG  226 (325)
Q Consensus       157 ~~~a~~~g~-~v~~~~~~~~~~~~~~~~----g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~----~~~~~~  226 (325)
                      +.+++ .|+ +|++++.++...+.+++.    +. +.+...            .+...||+|+.+.....    +..+.+
T Consensus       135 i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~------------~~~~~fD~Vvani~~~~~~~l~~~~~~  201 (250)
T PRK00517        135 IAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLP------------QGDLKADVIVANILANPLLELAPDLAR  201 (250)
T ss_pred             HHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEc------------cCCCCcCEEEEcCcHHHHHHHHHHHHH
Confidence            76544 576 699999998887766532    22 111100            01115899998766432    466788


Q ss_pred             cccCCCEEEEEeccC
Q 020487          227 SLNIDGRLFIIGTQG  241 (325)
Q Consensus       227 ~l~~~g~~v~~g~~~  241 (325)
                      .|++||.++..|...
T Consensus       202 ~LkpgG~lilsgi~~  216 (250)
T PRK00517        202 LLKPGGRLILSGILE  216 (250)
T ss_pred             hcCCCcEEEEEECcH
Confidence            899999999887543

>PRK08324 short chain dehydrogenase; Validated

Probab=97.87  E-value=0.00011  Score=71.39  Aligned_cols=115  Identities=20%  Similarity=0.230  Sum_probs=73.3

Q ss_pred             ceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe
Q 020487           92 GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA  171 (325)
Q Consensus        92 g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~  171 (325)
                      -++++|..+++..++.+ +..+.+++.....          ......+|++++|+|++|.+|..+++.+...|++|++++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~  453 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLAD  453 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEe
Confidence            34677777777777776 5566666541100          012223689999999999999999999999999999999


Q ss_pred             cChhhHHHHH-HcCC--C-EE--EeCCCchHHHHHHH-Hh-CCCcccEEEeCCC
Q 020487          172 GSEEKLAVCK-DLGA--D-VC--INYKTEDFVARVKE-ET-GGKGVDVILDCMG  217 (325)
Q Consensus       172 ~~~~~~~~~~-~~g~--~-~~--~~~~~~~~~~~~~~-~~-~~~~~d~vi~~~g  217 (325)
                      ++.++.+.+. .++.  . ..  .|-.+......+.+ .. ...++|++|+++|
T Consensus       454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG  507 (681)
T PRK08324        454 LDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG  507 (681)
T ss_pred             CCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            9988765544 3332  1 12  23333222222222 11 1126999999998

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.82  E-value=0.00019  Score=58.87  Aligned_cols=78  Identities=27%  Similarity=0.456  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCC--CE--EEeCCCchH-H---HHHHHHhCCCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--DV--CINYKTEDF-V---ARVKEETGGKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~--~~--~~~~~~~~~-~---~~~~~~~~~~~~  209 (325)
                      .++.++|+||++++|.++++.+...|++|+.+.|..++++.+. +++.  ..  .+|-.+... .   ..+.+..+  .+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g--~i   82 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG--RI   82 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC--cc
Confidence            3578999999999999999999999999999999999998776 5763  22  233333222 2   22223333  69


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |+++++.|.
T Consensus        83 DiLvNNAGl   91 (246)
T COG4221          83 DILVNNAGL   91 (246)
T ss_pred             cEEEecCCC
Confidence            999999985

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.81  E-value=0.00014  Score=57.80  Aligned_cols=80  Identities=24%  Similarity=0.302  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCC---CEEEeCCCchHHHHHHHHhCC--CcccEEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA---DVCINYKTEDFVARVKEETGG--KGVDVIL  213 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~--~~~d~vi  213 (325)
                      .|-+|||+|+++++|+.+++-...+|=+|++..|++++++++++...   ..+.|-.+.+..+.+.++..+  ...++++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli   83 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI   83 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence            37799999999999999999999999999999999999999886432   234444444433334443322  2579999


Q ss_pred             eCCCh
Q 020487          214 DCMGA  218 (325)
Q Consensus       214 ~~~g~  218 (325)
                      +|+|-
T Consensus        84 NNAGI   88 (245)
T COG3967          84 NNAGI   88 (245)
T ss_pred             ecccc
Confidence            99874

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.79  E-value=0.00039  Score=55.76  Aligned_cols=93  Identities=19%  Similarity=0.202  Sum_probs=67.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh----
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA----  218 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~----  218 (325)
                      |+|+||+|.+|..+++.+...|.+|++++|++++.+.  ..+. +++..+..+ .+.+.+...  ++|.||.+.|.    
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~-~~~~~d~~d-~~~~~~al~--~~d~vi~~~~~~~~~   74 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGV-EIIQGDLFD-PDSVKAALK--GADAVIHAAGPPPKD   74 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTE-EEEESCTTC-HHHHHHHHT--TSSEEEECCHSTTTH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--cccc-ccceeeehh-hhhhhhhhh--hcchhhhhhhhhccc
Confidence            7899999999999999999999999999999998776  3333 344333333 245566555  69999999983    


Q ss_pred             -HHHHHhhccccCC--CEEEEEeccC
Q 020487          219 -SYFQRNLGSLNID--GRLFIIGTQG  241 (325)
Q Consensus       219 -~~~~~~~~~l~~~--g~~v~~g~~~  241 (325)
                       .....+++.++..  .+++.++...
T Consensus        75 ~~~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   75 VDAAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             HHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             ccccccccccccccccccceeeeccc
Confidence             3345555555443  3788776655

...

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.75  E-value=0.00059  Score=62.14  Aligned_cols=90  Identities=18%  Similarity=0.182  Sum_probs=69.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      -.|++++|.|. |.+|..+++.++.+|++|+++.+++.+...+...|+... +         +.+..  +.+|+++.|.|
T Consensus       252 LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~-~---------leell--~~ADIVI~atG  318 (476)
T PTZ00075        252 IAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV-T---------LEDVV--ETADIFVTATG  318 (476)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec-c---------HHHHH--hcCCEEEECCC
Confidence            46899999998 999999999999999999999877666544444565322 1         11222  26899999998


Q ss_pred             hHHH--HHhhccccCCCEEEEEecc
Q 020487          218 ASYF--QRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       218 ~~~~--~~~~~~l~~~g~~v~~g~~  240 (325)
                      ...+  ...++.|++++.++.+|..
T Consensus       319 t~~iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        319 NKDIITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             cccccCHHHHhccCCCcEEEEcCCC
Confidence            7653  4778999999999999765

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.69  E-value=0.00019  Score=60.77  Aligned_cols=106  Identities=25%  Similarity=0.336  Sum_probs=76.6

Q ss_pred             HHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC-E--EEeCCCchHH
Q 020487          125 CTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-V--CINYKTEDFV  197 (325)
Q Consensus       125 ~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~-~--~~~~~~~~~~  197 (325)
                      ..+...+.++.+++||+++|=+|+  +.|.+++.+|+..|++|+.++.|++..+.+++    .|.. .  +.-.      
T Consensus        58 ~~k~~~~~~kl~L~~G~~lLDiGC--GWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~------  129 (283)
T COG2230          58 RAKLDLILEKLGLKPGMTLLDIGC--GWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ------  129 (283)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEeCC--ChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec------
Confidence            455666678899999999999996  68999999999999999999999998877654    4443 1  2111      


Q ss_pred             HHHHHHhCCCcccEEE-----eCCCh----HHHHHhhccccCCCEEEEEeccC
Q 020487          198 ARVKEETGGKGVDVIL-----DCMGA----SYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       198 ~~~~~~~~~~~~d~vi-----~~~g~----~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                       +.++..+  .||-|+     +.+|.    ..+..+.+.|+++|++.+.....
T Consensus       130 -d~rd~~e--~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~  179 (283)
T COG2230         130 -DYRDFEE--PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG  179 (283)
T ss_pred             -ccccccc--ccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence             1122221  377775     45554    23677788999999998776544

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.68  E-value=0.00088  Score=56.15  Aligned_cols=103  Identities=18%  Similarity=0.255  Sum_probs=66.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc---CCCEEEeC--CCchHHHHHHHHhC--CCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL---GADVCINY--KTEDFVARVKEETG--GKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~~~~~~--~~~~~~~~~~~~~~--~~~~d  210 (325)
                      .+++++|+|++|.+|..+++.+...|++|+.+++++++.+.+. .+   +.-+.+..  .+......+.+...  ..++|
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   83 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID   83 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            3679999999999999999999999999999999988776552 22   22223322  22222222211110  12579


Q ss_pred             EEEeCCChH------------------------HHHHhhccccCCCEEEEEeccC
Q 020487          211 VILDCMGAS------------------------YFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       211 ~vi~~~g~~------------------------~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      .++.+.+..                        .+...+..++++|+++.++...
T Consensus        84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  138 (238)
T PRK05786         84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS  138 (238)
T ss_pred             EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence            999888731                        0233445566789999887654

>PRK12742 oxidoreductase; Provisional

Probab=97.61  E-value=0.0011  Score=55.59  Aligned_cols=102  Identities=25%  Similarity=0.374  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhHHHH-HHcCCCEE-EeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC-KDLGADVC-INYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~~~~-~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .+++++|+|++|.+|..+++.+...|++|+.+.+ ++++.+.+ .+++...+ .|..+........+..  .++|+++++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~   82 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVN   82 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEEC
Confidence            3689999999999999999999999999988765 44444433 34454332 2332322222222222  368999999


Q ss_pred             CChHH--------------------------HHHhhccccCCCEEEEEeccCC
Q 020487          216 MGASY--------------------------FQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       216 ~g~~~--------------------------~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                      .|...                          +..+...++.+|+++.++....
T Consensus        83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  135 (237)
T PRK12742         83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG  135 (237)
T ss_pred             CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence            86410                          0223344566789998876543

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.58  E-value=5.8e-05  Score=71.78  Aligned_cols=94  Identities=20%  Similarity=0.275  Sum_probs=63.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC---------------------hhhHHHHHHcCCCEEEeCCC-
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS---------------------EEKLAVCKDLGADVCINYKT-  193 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~---------------------~~~~~~~~~~g~~~~~~~~~-  193 (325)
                      ...+|++|+|+|+ |++|+++++.++..|++|++++..                     ..+.+.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            3578999999999 999999999999999999998843                     33556677889876665433 


Q ss_pred             chH-HHHHHHHhCCCcccEEEeCCChHH-HHHhhccccCCCEEE
Q 020487          194 EDF-VARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLF  235 (325)
Q Consensus       194 ~~~-~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v  235 (325)
                      .+. ...+.     .++|.+|.++|... ....+.....+|.+.
T Consensus       212 ~~~~~~~~~-----~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~  250 (564)
T PRK12771        212 EDITLEQLE-----GEFDAVFVAIGAQLGKRLPIPGEDAAGVLD  250 (564)
T ss_pred             CcCCHHHHH-----hhCCEEEEeeCCCCCCcCCCCCCccCCcEE
Confidence            221 12211     25899999999753 222233334444443

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.58  E-value=0.00052  Score=60.07  Aligned_cols=107  Identities=19%  Similarity=0.320  Sum_probs=73.9

Q ss_pred             ceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCC---CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhH-H
Q 020487          104 QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL---SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKL-A  178 (325)
Q Consensus       104 ~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~---~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~-~  178 (325)
                      ..+++|+.+..+.++... +.+.++.++......   -++.+|+|+|+ |.+|..+++.++..|+ +|+++.++.++. +
T Consensus       140 ~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~  217 (311)
T cd05213         140 KAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEE  217 (311)
T ss_pred             HHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            467778888877776543 556666665322221   36899999998 9999999999998875 789999988765 4


Q ss_pred             HHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHH
Q 020487          179 VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF  221 (325)
Q Consensus       179 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~  221 (325)
                      .++++|+. +.+.      +.+.+...  .+|+||.|++.+..
T Consensus       218 la~~~g~~-~~~~------~~~~~~l~--~aDvVi~at~~~~~  251 (311)
T cd05213         218 LAKELGGN-AVPL------DELLELLN--EADVVISATGAPHY  251 (311)
T ss_pred             HHHHcCCe-EEeH------HHHHHHHh--cCCEEEECCCCCch
Confidence            55678773 3321      12233222  58999999997543

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.56  E-value=0.00092  Score=62.44  Aligned_cols=106  Identities=15%  Similarity=0.226  Sum_probs=69.6

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH---------cCC-----CEEEeCCCchHHH
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD---------LGA-----DVCINYKTEDFVA  198 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~---------~g~-----~~~~~~~~~~~~~  198 (325)
                      ...+.+.|.+++|+|++|.+|..+++.+...|++|++++++.++.+.+.+         .|.     -.++..+-.+ .+
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD-~e  151 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK-PD  151 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC-HH
Confidence            44556788999999999999999999999999999999999887654321         121     1122222222 23


Q ss_pred             HHHHHhCCCcccEEEeCCChHH----------------HHHhhccccC--CCEEEEEeccC
Q 020487          199 RVKEETGGKGVDVILDCMGASY----------------FQRNLGSLNI--DGRLFIIGTQG  241 (325)
Q Consensus       199 ~~~~~~~~~~~d~vi~~~g~~~----------------~~~~~~~l~~--~g~~v~~g~~~  241 (325)
                      .+.+.++  ++|+||.|+|...                ...+++.+..  .++||.++..+
T Consensus       152 sI~~aLg--giDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig  210 (576)
T PLN03209        152 QIGPALG--NASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG  210 (576)
T ss_pred             HHHHHhc--CCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence            4445554  6899999987421                1233343332  36899887654

>PRK06198 short chain dehydrogenase; Provisional

Probab=97.53  E-value=0.0064  Score=51.67  Aligned_cols=80  Identities=21%  Similarity=0.293  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHH----HHHHcCCCE---EEeCCCchHHHHHHHHhC--CCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLA----VCKDLGADV---CINYKTEDFVARVKEETG--GKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~----~~~~~g~~~---~~~~~~~~~~~~~~~~~~--~~~  208 (325)
                      .+.+++|+|++|.+|..+++.+...|++ |+++.++.++..    .+++.+...   ..|..+......+.+...  -.+
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR   84 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4678999999999999999999999998 999998766544    223344332   123333222222222210  125


Q ss_pred             ccEEEeCCCh
Q 020487          209 VDVILDCMGA  218 (325)
Q Consensus       209 ~d~vi~~~g~  218 (325)
                      +|+++.+.|.
T Consensus        85 id~li~~ag~   94 (260)
T PRK06198         85 LDALVNAAGL   94 (260)
T ss_pred             CCEEEECCCc
Confidence            8999999874

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.53  E-value=0.001  Score=57.19  Aligned_cols=77  Identities=29%  Similarity=0.400  Sum_probs=55.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEE-EeCCCchHHHHHHHHh--CCCcccEEEeCCC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEET--GGKGVDVILDCMG  217 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~--~~~~~d~vi~~~g  217 (325)
                      .+++|+|++|.+|..+++.+...|++|++++++.++.+.+...+...+ .|..+......+.+..  ...++|+++++.|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag   81 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG   81 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            478999999999999999999999999999998887776665554433 3444433332222221  1236899999998

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.48  E-value=0.0012  Score=56.79  Aligned_cols=78  Identities=27%  Similarity=0.443  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEE-EeCCCchHHHHHHH----HhCCCcccEEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKE----ETGGKGVDVIL  213 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~----~~~~~~~d~vi  213 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+.+.+...+ .|..+......+.+    ..+ ..+|+++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~-g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSG-GRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcC-CCccEEE
Confidence            35789999999999999999999999999999999888877766554432 24333332222222    222 2689999


Q ss_pred             eCCC
Q 020487          214 DCMG  217 (325)
Q Consensus       214 ~~~g  217 (325)
                      ++.|
T Consensus        82 ~~Ag   85 (277)
T PRK05993         82 NNGA   85 (277)
T ss_pred             ECCC
Confidence            9876

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.41  E-value=0.00068  Score=51.56  Aligned_cols=92  Identities=13%  Similarity=0.186  Sum_probs=59.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-HcCCC--EEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGAD--VCINYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-~~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      .+.+++|+|+ |.+|.+++..+...|+ +|+++.|+.++.+.+. .++..  ..++..+.      .+..  ..+|++|+
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~------~~~~--~~~DivI~   81 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDL------EEAL--QEADIVIN   81 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGH------CHHH--HTESEEEE
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHH------HHHH--hhCCeEEE
Confidence            4889999998 9999999999999999 5999999998876654 45332  23332221      1111  16999999


Q ss_pred             CCChHHH---HHhhccccC-CCEEEEEec
Q 020487          215 CMGASYF---QRNLGSLNI-DGRLFIIGT  239 (325)
Q Consensus       215 ~~g~~~~---~~~~~~l~~-~g~~v~~g~  239 (325)
                      |++....   ...+....+ -+.+++++.
T Consensus        82 aT~~~~~~i~~~~~~~~~~~~~~v~Dla~  110 (135)
T PF01488_consen   82 ATPSGMPIITEEMLKKASKKLRLVIDLAV  110 (135)
T ss_dssp             -SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred             ecCCCCcccCHHHHHHHHhhhhceecccc
Confidence            9886532   222222222 146666654

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.40  E-value=0.001  Score=58.78  Aligned_cols=80  Identities=29%  Similarity=0.450  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCE-E--EeCCCchHHHHHHHHh--CCCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-C--INYKTEDFVARVKEET--GGKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~--~~~~~~~~~~~~~~~~--~~~~~  209 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++.+++++.+.+    ++.+.+. +  .|-.+......+.+..  ...++
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            468999999999999999999999999999999998876543    3345442 2  2333322222222211  11368


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |++|++.|.
T Consensus        86 D~lVnnAG~   94 (330)
T PRK06139         86 DVWVNNVGV   94 (330)
T ss_pred             CEEEECCCc
Confidence            999999873

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.002  Score=54.24  Aligned_cols=78  Identities=24%  Similarity=0.368  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEE-EeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVC-INYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+.+ .+...+ .|..+......+.+..  .++|++|.+.
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--~~~d~vi~~a   85 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAA--GAFDGLVNCA   85 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHh--CCCCEEEECC
Confidence            46799999999999999999999999999999998877665543 343322 2333332222333322  3689999998


Q ss_pred             Ch
Q 020487          217 GA  218 (325)
Q Consensus       217 g~  218 (325)
                      |.
T Consensus        86 g~   87 (245)
T PRK07060         86 GI   87 (245)
T ss_pred             CC
Confidence            73

>PRK08177 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.0016  Score=54.08  Aligned_cols=78  Identities=15%  Similarity=0.168  Sum_probs=55.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEE--eCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .+++|+|++|.+|..+++.+...|++|++++++.++.+.+++++....+  |-.+....+.+.+...+.++|+++.+.|.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~   81 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI   81 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence            4689999999999999999999999999999988776666554332222  33333334444444444579999988764

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.0026  Score=54.25  Aligned_cols=78  Identities=23%  Similarity=0.329  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEE--eCCCchHH----HHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDFV----ARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~~----~~~~~~~~~~~~d  210 (325)
                      .+.+++|+|+++.+|..+++.+...|++|++++++.++.+.+. +++.. ..+  |..+....    +.+.+..+  .+|
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g--~id   82 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFG--RVD   82 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhC--CCC
Confidence            3679999999999999999999999999999999887655443 44432 122  33332222    22222233  589


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      +++.+.|.
T Consensus        83 ~lv~~ag~   90 (261)
T PRK08265         83 ILVNLACT   90 (261)
T ss_pred             EEEECCCC
Confidence            99998873

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=97.33  E-value=0.00013  Score=62.31  Aligned_cols=100  Identities=24%  Similarity=0.314  Sum_probs=63.5

Q ss_pred             HHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHH
Q 020487          129 STVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVK  201 (325)
Q Consensus       129 ~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~  201 (325)
                      ..+.+++++++|++||-+|+  +.|..+..+++..|++|+.++.+++..+.+++    .|..   .+...+-       +
T Consensus        52 ~~~~~~~~l~~G~~vLDiGc--GwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~-------~  122 (273)
T PF02353_consen   52 DLLCEKLGLKPGDRVLDIGC--GWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDY-------R  122 (273)
T ss_dssp             HHHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-G-------G
T ss_pred             HHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeec-------c
Confidence            34558889999999999996  48999999999999999999999998887753    4422   2222111       1


Q ss_pred             HHhCCCcccEEEe-----CCChH----HHHHhhccccCCCEEEEEec
Q 020487          202 EETGGKGVDVILD-----CMGAS----YFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       202 ~~~~~~~~d~vi~-----~~g~~----~~~~~~~~l~~~g~~v~~g~  239 (325)
                      +..+  .||.|+.     .+|..    .+..+.+.|+|||++++-..
T Consensus       123 ~~~~--~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~i  167 (273)
T PF02353_consen  123 DLPG--KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQTI  167 (273)
T ss_dssp             G-----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEEE
T ss_pred             ccCC--CCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEec
Confidence            2222  7898864     45532    25677789999999985533

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.0043  Score=52.32  Aligned_cols=101  Identities=20%  Similarity=0.308  Sum_probs=61.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh-hHHHH----HHcCCC-EEE--eCCCchHHHHHHH-HhC-CCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVC----KDLGAD-VCI--NYKTEDFVARVKE-ETG-GKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~-~~~~~----~~~g~~-~~~--~~~~~~~~~~~~~-~~~-~~~  208 (325)
                      .+.+++|+|++|.+|..++..+...|++|+++.++.. +.+.+    +..+.. ..+  |..+......+.+ ... ..+
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            3678999999999999999999999999999887653 22222    222322 122  3333222222222 111 125


Q ss_pred             ccEEEeCCChH--------------------HHHHhhccccCCCEEEEEec
Q 020487          209 VDVILDCMGAS--------------------YFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       209 ~d~vi~~~g~~--------------------~~~~~~~~l~~~g~~v~~g~  239 (325)
                      +|+++.+.+..                    .+..+...+..+|+++.+++
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            89998887531                    12344455556788888765

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=97.27  E-value=0.0023  Score=54.13  Aligned_cols=149  Identities=17%  Similarity=0.140  Sum_probs=99.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCC-----------chHH----HHHHH
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-----------EDFV----ARVKE  202 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~----~~~~~  202 (325)
                      .++.++++.|. |..|++++..++..|+-|........+.++.+.+|+...-..+.           ++|.    +.+.+
T Consensus       162 v~pA~vlv~G~-Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~  240 (356)
T COG3288         162 VSPAKVLVIGA-GVAGLAAIATAVRLGAIVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE  240 (356)
T ss_pred             ccchhhhhhhH-HHHHHHHHHHHhhcceEEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence            45677899998 99999999999999999999998888888887777654321111           1121    12222


Q ss_pred             HhCCCcccEEEeCCCh---H----HHHHhhccccCCCEEEEEeccCCcccc--cchHHHHhhccEeeec-ccccccchhH
Q 020487          203 ETGGKGVDVILDCMGA---S----YFQRNLGSLNIDGRLFIIGTQGGAKTE--LNITSLFAKRLTVQAA-GLRSRSTENK  272 (325)
Q Consensus       203 ~~~~~~~d~vi~~~g~---~----~~~~~~~~l~~~g~~v~~g~~~~~~~~--~~~~~~~~~~~~i~~~-~~~~~~~~~~  272 (325)
                      ..  +++|+||.+.-.   +    ....+++.|+||+.+|++....+.+-.  .+..-...+++++.|. ++..+...+.
T Consensus       241 ~~--~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nlp~r~a~~a  318 (356)
T COG3288         241 QA--KEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNLPGRLAAQA  318 (356)
T ss_pred             Hh--cCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCcchhhhhhH
Confidence            22  379999998632   1    146788999999999998544433211  2222233467888876 5666655666


Q ss_pred             HHHHHHHHHHHHHHHHC
Q 020487          273 ALIVSEVEKNVWPAIAV  289 (325)
Q Consensus       273 ~~~~~~~~~~~~~~~~~  289 (325)
                      +.++..++-.+++++.+
T Consensus       319 S~LYa~Nl~~~l~ll~~  335 (356)
T COG3288         319 SQLYATNLVNLLKLLCK  335 (356)
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            66777777667766543

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.25  E-value=0.0035  Score=55.61  Aligned_cols=78  Identities=21%  Similarity=0.305  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCEE---EeCCCchHHHHH----HHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARV----KEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~----~~~~~~~  207 (325)
                      .+.+++|+|+++.+|..+++.+...|++|+++++++++.+.+.    ..|....   .|-.+......+    .+..+  
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g--   84 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG--   84 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC--
Confidence            4678999999999999999999999999999999887665432    3454322   233332222222    22233  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|++|++.|.
T Consensus        85 ~iD~lInnAg~   95 (334)
T PRK07109         85 PIDTWVNNAMV   95 (334)
T ss_pred             CCCEEEECCCc
Confidence            68999999874

>PRK06182 short chain dehydrogenase; Validated

Probab=97.25  E-value=0.0038  Score=53.60  Aligned_cols=80  Identities=24%  Similarity=0.299  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEE-EeCCCchHHHHHHH-Hh-CCCcccEEEeC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKE-ET-GGKGVDVILDC  215 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~-~~-~~~~~d~vi~~  215 (325)
                      ++.+++|+|++|.+|..+++.+...|++|++++++.++.+.+...+...+ .|-.+......+.+ .. ...++|+++++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~   81 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN   81 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            36789999999999999999999999999999999887766554444322 24333332222222 11 12368999999


Q ss_pred             CCh
Q 020487          216 MGA  218 (325)
Q Consensus       216 ~g~  218 (325)
                      .|.
T Consensus        82 ag~   84 (273)
T PRK06182         82 AGY   84 (273)
T ss_pred             CCc
Confidence            873

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.25  E-value=0.0011  Score=57.67  Aligned_cols=78  Identities=24%  Similarity=0.392  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCC--CE-E--EeCCCchHH----HHHHHHhCCCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--DV-C--INYKTEDFV----ARVKEETGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~--~~-~--~~~~~~~~~----~~~~~~~~~~~  208 (325)
                      ++.+++|+|++|++|..+++.+...|++|++++++.++.+.+. .++.  .. .  .|-.+....    +.+.+..+  .
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~   85 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG--G   85 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC--C
Confidence            4789999999999999999999999999999999888766543 4442  11 1  233332222    22222233  6


Q ss_pred             ccEEEeCCCh
Q 020487          209 VDVILDCMGA  218 (325)
Q Consensus       209 ~d~vi~~~g~  218 (325)
                      +|++|++.|.
T Consensus        86 id~vI~nAG~   95 (296)
T PRK05872         86 IDVVVANAGI   95 (296)
T ss_pred             CCEEEECCCc
Confidence            8999999984

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.24  E-value=0.0042  Score=52.38  Aligned_cols=80  Identities=20%  Similarity=0.259  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHHHHHHHh-C-CCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVARVKEET-G-GKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~~~~~~~-~-~~~~  209 (325)
                      ++.+++|+|++|.+|..++..+...|++|+++.+++++.+...    ..+.. .++  |..+......+.+.. . ..++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4788999999999999999999999999999998877655432    22332 222  333322222222211 0 1368


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |+++.+.|.
T Consensus        86 d~vi~~ag~   94 (250)
T PRK12939         86 DGLVNNAGI   94 (250)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.22  E-value=0.0045  Score=56.71  Aligned_cols=141  Identities=16%  Similarity=0.266  Sum_probs=89.5

Q ss_pred             CCCCceeEEEEEecCCCCCCCCCCEE-EEEcC----------------CceeeeEEeecCCceeeCCCCCCHHhhccCcc
Q 020487           60 YPGLECSGTILSVGKNVSRWKVGDQV-CALLG----------------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE  122 (325)
Q Consensus        60 ~~G~e~~G~V~~vG~~~~~~~~Gd~V-~~~~~----------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  122 (325)
                      .-|+|+++-+.+|+++....-+|+.= ++-+.                ++.|++        .+++|+.+..+.+ ....
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~--------a~~~~k~v~~~t~-i~~~  161 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQK--------AFSVAKRVRTETG-IGAG  161 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHH--------HHHHHhhHhhhcC-CCCC
Confidence            46999999999999988765555542 21110                122322        2344444443332 2333


Q ss_pred             hHHHHHHHHHhhcC---CCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHH-HHHHcCCCEEEeCCCchHH
Q 020487          123 VACTVWSTVFMTSH---LSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLA-VCKDLGADVCINYKTEDFV  197 (325)
Q Consensus       123 ~~~~a~~~l~~~~~---~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~  197 (325)
                      +.+.++.++.....   --++.+++|+|+ |.+|.++++.+...|+ +|+++.++.++.. .++.+|.. +++.      
T Consensus       162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~------  233 (423)
T PRK00045        162 AVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL------  233 (423)
T ss_pred             CcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH------
Confidence            45556666532221   246789999998 9999999999999998 8999999988765 55567753 3221      


Q ss_pred             HHHHHHhCCCcccEEEeCCChH
Q 020487          198 ARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       198 ~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      ....+...  ++|+||+|++.+
T Consensus       234 ~~~~~~l~--~aDvVI~aT~s~  253 (423)
T PRK00045        234 DELPEALA--EADIVISSTGAP  253 (423)
T ss_pred             HHHHHHhc--cCCEEEECCCCC
Confidence            22233332  689999999864

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.18  E-value=0.0029  Score=54.83  Aligned_cols=145  Identities=11%  Similarity=0.055  Sum_probs=81.7

Q ss_pred             CCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHH--HHHHhhcCCCCCCEEEEEcCCchHHHH
Q 020487           78 RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW--STVFMTSHLSPGESFLVHGGSSGIGTF  155 (325)
Q Consensus        78 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~--~~l~~~~~~~~~~~vli~g~~g~~G~~  155 (325)
                      .+++|++.+..+.   |.++...+...++.+...+.+-.+    ....|..  ..+..  ...++++||-.|+ |. |..
T Consensus       105 p~~~g~~~~i~p~---w~~~~~~~~~~~i~ldpg~aFgtG----~h~tt~l~l~~l~~--~~~~g~~VLDvGc-Gs-G~l  173 (288)
T TIGR00406       105 PVQFGKRFWICPS---WRDVPSDEDALIIMLDPGLAFGTG----THPTTSLCLEWLED--LDLKDKNVIDVGC-GS-GIL  173 (288)
T ss_pred             CEEEcCeEEEECC---CcCCCCCCCcEEEEECCCCcccCC----CCHHHHHHHHHHHh--hcCCCCEEEEeCC-Ch-hHH
Confidence            4677887776643   333322222344555444443322    1222222  22222  2357899999997 54 877


Q ss_pred             HHHHHHHCCC-EEEEEecChhhHHHHHH----cCCC-EEEeCCCchHHHHHHHHhCCCcccEEEeCCChH----HHHHhh
Q 020487          156 AIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMGAS----YFQRNL  225 (325)
Q Consensus       156 ~~~~a~~~g~-~v~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~----~~~~~~  225 (325)
                      ++.+++ .|+ +|++++.++...+.+++    .+.. .+......     .... ...+||+|+......    .+..+.
T Consensus       174 ai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~-----~~~~-~~~~fDlVvan~~~~~l~~ll~~~~  246 (288)
T TIGR00406       174 SIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIY-----LEQP-IEGKADVIVANILAEVIKELYPQFS  246 (288)
T ss_pred             HHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecc-----cccc-cCCCceEEEEecCHHHHHHHHHHHH
Confidence            776665 465 89999999887766653    1211 11111110     1111 134799999876543    245667


Q ss_pred             ccccCCCEEEEEecc
Q 020487          226 GSLNIDGRLFIIGTQ  240 (325)
Q Consensus       226 ~~l~~~g~~v~~g~~  240 (325)
                      +.|+|+|.++..|..
T Consensus       247 ~~LkpgG~li~sgi~  261 (288)
T TIGR00406       247 RLVKPGGWLILSGIL  261 (288)
T ss_pred             HHcCCCcEEEEEeCc
Confidence            899999999988754

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.18  E-value=0.003  Score=53.72  Aligned_cols=102  Identities=27%  Similarity=0.437  Sum_probs=69.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCE-E--E--eCCC-ch---HHHHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-C--I--NYKT-ED---FVARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~--~--~~~~-~~---~~~~~~~~~~  205 (325)
                      .|..|+|+||++++|.+++.-.-+.|++++.+.+..++++.+    ++.+... +  +  |-.+ ++   +.+++....|
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg   90 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG   90 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999999999999888887766    3344332 2  2  2222 22   2233333444


Q ss_pred             CCcccEEEeCCChH--------------------------HHHHhhccccC--CCEEEEEeccCC
Q 020487          206 GKGVDVILDCMGAS--------------------------YFQRNLGSLNI--DGRLFIIGTQGG  242 (325)
Q Consensus       206 ~~~~d~vi~~~g~~--------------------------~~~~~~~~l~~--~g~~v~~g~~~~  242 (325)
                        ++|+.+++.|-.                          .+..++..|++  +|+++.+++..+
T Consensus        91 --~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG  153 (282)
T KOG1205|consen   91 --RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG  153 (282)
T ss_pred             --CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence              799999988741                          02244555544  399999977665

>PRK08017 oxidoreductase; Provisional

Probab=97.16  E-value=0.0036  Score=53.03  Aligned_cols=76  Identities=26%  Similarity=0.302  Sum_probs=53.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEE-EeCCCchHH----HHHHHHhCCCcccEEEeC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFV----ARVKEETGGKGVDVILDC  215 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~----~~~~~~~~~~~~d~vi~~  215 (325)
                      ++++|+|++|.+|..+++.+...|++|+++.++.++.+.+++.+...+ .|..+....    +.+.+..+ ..+|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTD-NRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcC-CCCeEEEEC
Confidence            479999999999999999999999999999999888877776665433 233332221    22222222 357888888


Q ss_pred             CC
Q 020487          216 MG  217 (325)
Q Consensus       216 ~g  217 (325)
                      .|
T Consensus        82 ag   83 (256)
T PRK08017         82 AG   83 (256)
T ss_pred             CC
Confidence            76

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.15  E-value=0.0046  Score=55.73  Aligned_cols=110  Identities=22%  Similarity=0.306  Sum_probs=74.6

Q ss_pred             cchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHH
Q 020487          121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV  200 (325)
Q Consensus       121 ~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  200 (325)
                      ..+....+..+.+...++++++||-+|+  +.|..+..+++..|++|++++.+++..+.+++......+.....++    
T Consensus       149 ~~Aq~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~----  222 (383)
T PRK11705        149 EEAQEAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDY----  222 (383)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECch----
Confidence            3334455555667778899999999996  4788888899888999999999999988887543221111111111    


Q ss_pred             HHHhCCCcccEEEeC-----CCh----HHHHHhhccccCCCEEEEEe
Q 020487          201 KEETGGKGVDVILDC-----MGA----SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       201 ~~~~~~~~~d~vi~~-----~g~----~~~~~~~~~l~~~g~~v~~g  238 (325)
                      .+.  ...||.|+..     +|.    ..+..+.+.|+|+|.++...
T Consensus       223 ~~l--~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        223 RDL--NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             hhc--CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            111  2369988743     343    23577788999999998764

>PLN02780 ketoreductase/ oxidoreductase

Probab=97.13  E-value=0.0033  Score=55.40  Aligned_cols=79  Identities=24%  Similarity=0.353  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H----cCCCE----EEeCCC--chHHHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D----LGADV----CINYKT--EDFVARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~----~g~~~----~~~~~~--~~~~~~~~~~~~~~  207 (325)
                      .|.+++|+||++++|.+.++.+...|++|+++++++++.+.+. +    .+...    ..|-.+  ....+.+.+..++.
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            4789999999999999999998889999999999998776543 2    11111    223332  23344555555554


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      .+|++++++|
T Consensus       132 didilVnnAG  141 (320)
T PLN02780        132 DVGVLINNVG  141 (320)
T ss_pred             CccEEEEecC
Confidence            5679999876

>PRK06953 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.0053  Score=50.91  Aligned_cols=78  Identities=27%  Similarity=0.395  Sum_probs=55.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCE-EEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .+++|+|++|.+|..+++.+...|++|++++++.+..+.++..+... ..|-.+......+.+...+.++|+++.+.|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            46899999999999999988888999999999888777666555432 2233333333333333333468999998764

>PRK06128 oxidoreductase; Provisional

Probab=97.11  E-value=0.0081  Score=52.38  Aligned_cols=101  Identities=22%  Similarity=0.365  Sum_probs=62.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh--H----HHHHHcCCCE-EE--eCCCchHH----HHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--L----AVCKDLGADV-CI--NYKTEDFV----ARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~--~----~~~~~~g~~~-~~--~~~~~~~~----~~~~~~~~  205 (325)
                      .+.++||+|+++.+|..++..+...|++|+++.++.+.  .    +.++..+... .+  |-.+....    +.+.+..+
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            36799999999999999999999999999887754321  1    2223334322 22  32222222    22222333


Q ss_pred             CCcccEEEeCCChH---------------------------HHHHhhccccCCCEEEEEeccC
Q 020487          206 GKGVDVILDCMGAS---------------------------YFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       206 ~~~~d~vi~~~g~~---------------------------~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                        ++|++|.+.|..                           .+..++..+.++|+++.++...
T Consensus       134 --~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~  194 (300)
T PRK06128        134 --GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ  194 (300)
T ss_pred             --CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcc
Confidence              689999988731                           0123344566788998876544

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.11  E-value=0.0036  Score=53.36  Aligned_cols=77  Identities=30%  Similarity=0.427  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHc-CCC-EEE--eCCCch-HH---HHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-GAD-VCI--NYKTED-FV---ARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~-g~~-~~~--~~~~~~-~~---~~~~~~~~~~~~d  210 (325)
                      ++.+++|+|++|.+|..+++.+...|++|+++.++.++.+.+.+. +.. ..+  |-.+.. ..   +.+.+..+  .+|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id   81 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFG--KID   81 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhC--CCC
Confidence            478999999999999999999999999999999988776665542 322 122  322222 11   22222233  689


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      +++++.|
T Consensus        82 ~li~~Ag   88 (262)
T TIGR03325        82 CLIPNAG   88 (262)
T ss_pred             EEEECCC
Confidence            9999986

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12367 short chain dehydrogenase; Provisional

Probab=97.07  E-value=0.0054  Score=51.82  Aligned_cols=76  Identities=16%  Similarity=0.256  Sum_probs=49.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      +.+++|+|++|.+|..+++.+...|++|+++.++..........+....+..+..+ ...+.+..+  .+|++|+|+|.
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~--~iDilVnnAG~   89 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGK-EESLDKQLA--SLDVLILNHGI   89 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCC-HHHHHHhcC--CCCEEEECCcc
Confidence            67999999999999999999999999999998876222111111112222222222 123334443  59999999874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.07  E-value=0.0089  Score=55.36  Aligned_cols=79  Identities=25%  Similarity=0.416  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh--hhHHHH-HHcCCCE-EEeCCCchHHHHHHHHhC--CCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVC-KDLGADV-CINYKTEDFVARVKEETG--GKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~--~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~~--~~~~d~v  212 (325)
                      ++.+++|+|++|.+|..+++.+...|++|+++.+..  +..+.+ .+++... ..|-.+......+.+...  ..++|++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v  288 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV  288 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            478999999999999999999999999999988743  222222 3455432 234444333333333221  1268999


Q ss_pred             EeCCC
Q 020487          213 LDCMG  217 (325)
Q Consensus       213 i~~~g  217 (325)
                      |.+.|
T Consensus       289 i~~AG  293 (450)
T PRK08261        289 VHNAG  293 (450)
T ss_pred             EECCC
Confidence            99988

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.0034  Score=53.42  Aligned_cols=79  Identities=32%  Similarity=0.384  Sum_probs=54.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCC--EEE--eCCCchHH----HHHHHHhCCCc
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD--VCI--NYKTEDFV----ARVKEETGGKG  208 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~--~~~--~~~~~~~~----~~~~~~~~~~~  208 (325)
                      -++.++||+|++|.+|..++..+...|++|+++.++.+..+.+.+ ....  .++  |..+....    +.+.+..+  +
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~   86 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFG--G   86 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhC--C
Confidence            467899999999999999999999999999999998776655443 2222  222  33332221    22222233  6


Q ss_pred             ccEEEeCCCh
Q 020487          209 VDVILDCMGA  218 (325)
Q Consensus       209 ~d~vi~~~g~  218 (325)
                      +|+||.+.|.
T Consensus        87 ~d~vi~~ag~   96 (264)
T PRK12829         87 LDVLVNNAGI   96 (264)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.005  Score=52.47  Aligned_cols=82  Identities=24%  Similarity=0.371  Sum_probs=53.7

Q ss_pred             CCCCCEEEEEcCCc-hHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-----cCCCEE--E--eCCCchHHHHHHHHh--
Q 020487          137 LSPGESFLVHGGSS-GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LGADVC--I--NYKTEDFVARVKEET--  204 (325)
Q Consensus       137 ~~~~~~vli~g~~g-~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-----~g~~~~--~--~~~~~~~~~~~~~~~--  204 (325)
                      +..+.+++|+|++| ++|.++++.+...|++|+++.++.++.+...+     ++...+  +  |..+......+.+..  
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            34578999999986 79999999999999999999988776544321     343222  2  333322222222211  


Q ss_pred             CCCcccEEEeCCCh
Q 020487          205 GGKGVDVILDCMGA  218 (325)
Q Consensus       205 ~~~~~d~vi~~~g~  218 (325)
                      ....+|++|.+.|.
T Consensus        94 ~~g~id~li~~ag~  107 (262)
T PRK07831         94 RLGRLDVLVNNAGL  107 (262)
T ss_pred             HcCCCCEEEECCCC
Confidence            11268999999983

>PRK06484 short chain dehydrogenase; Validated

Probab=97.05  E-value=0.0057  Score=57.73  Aligned_cols=101  Identities=18%  Similarity=0.299  Sum_probs=67.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE-EE--eCCCchHHH----HHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTEDFVA----RVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~~~~----~~~~~~~~~~~d  210 (325)
                      .+.+++|+|+++.+|..+++.+...|++|+++.++.++.+.+. +++... .+  |-.+.....    .+.+..+  .+|
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id  345 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWG--RLD  345 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcC--CCC
Confidence            4678999999999999999999999999999999888776654 344332 12  333322222    2222223  689


Q ss_pred             EEEeCCChH------------H---------------HHHhhccccCCCEEEEEeccC
Q 020487          211 VILDCMGAS------------Y---------------FQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       211 ~vi~~~g~~------------~---------------~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      ++|.++|..            .               +..++..++.+|+++.+++..
T Consensus       346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~  403 (520)
T PRK06484        346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIA  403 (520)
T ss_pred             EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchh
Confidence            999988731            0               123344556679999887654

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.03  E-value=0.0058  Score=53.09  Aligned_cols=78  Identities=29%  Similarity=0.475  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHHHHHH----HhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVARVKE----ETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~~~~~----~~~~~  207 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+.    +.+.. ..+  |-.+......+.+    ..+  
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g--  116 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIG--  116 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence            3578999999999999999999999999999999987765443    22322 122  3233222222222    222  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      .+|+++.|.|.
T Consensus       117 ~id~li~~AG~  127 (293)
T PRK05866        117 GVDILINNAGR  127 (293)
T ss_pred             CCCEEEECCCC
Confidence            68999999874

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.03  E-value=0.006  Score=47.29  Aligned_cols=100  Identities=17%  Similarity=0.178  Sum_probs=64.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      -.|.+++|.|- |.+|..+++.++.+|++|++++..+-+.-++..-|.. +.         .+.+...  ..|+++.+.|
T Consensus        21 l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~-v~---------~~~~a~~--~adi~vtaTG   87 (162)
T PF00670_consen   21 LAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFE-VM---------TLEEALR--DADIFVTATG   87 (162)
T ss_dssp             -TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-E-EE----------HHHHTT--T-SEEEE-SS
T ss_pred             eCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcE-ec---------CHHHHHh--hCCEEEECCC
Confidence            46899999996 9999999999999999999999988776666555653 22         1233332  5799999999


Q ss_pred             hHH--HHHhhccccCCCEEEEEeccCCcccccchHHHH
Q 020487          218 ASY--FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLF  253 (325)
Q Consensus       218 ~~~--~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~  253 (325)
                      ...  ....++.|+++.-+..+|...   ..++...+.
T Consensus        88 ~~~vi~~e~~~~mkdgail~n~Gh~d---~Eid~~~L~  122 (162)
T PF00670_consen   88 NKDVITGEHFRQMKDGAILANAGHFD---VEIDVDALE  122 (162)
T ss_dssp             SSSSB-HHHHHHS-TTEEEEESSSST---TSBTHHHHH
T ss_pred             CccccCHHHHHHhcCCeEEeccCcCc---eeEeecccc
Confidence            754  356678888887777665433   244544433

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.02  E-value=0.0048  Score=52.71  Aligned_cols=80  Identities=19%  Similarity=0.250  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc----CCC-EEE--eCCCchHHHHHHH-HhCCCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----GAD-VCI--NYKTEDFVARVKE-ETGGKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~----g~~-~~~--~~~~~~~~~~~~~-~~~~~~~  209 (325)
                      .+.+++|+|+++++|.++++.+...|++|++++++.++.+.+. ++    +.+ ..+  |-.+....+.+.+ .....++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            3788999999999999999999999999999999887665443 22    222 122  3233222222222 2112368


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |+++++.|.
T Consensus        87 D~lv~nag~   95 (263)
T PRK08339         87 DIFFFSTGG   95 (263)
T ss_pred             cEEEECCCC
Confidence            999999873

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.02  E-value=0.011  Score=48.24  Aligned_cols=100  Identities=16%  Similarity=0.231  Sum_probs=66.4

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHH----HcC-CCEEEeCCCchHHHHHHHHhC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLG-ADVCINYKTEDFVARVKEETG  205 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~----~~g-~~~~~~~~~~~~~~~~~~~~~  205 (325)
                      .+..+.++++++.+|+ |. |..++.+++..+  .+|++++.+++..+.++    .++ .+.+.... .+..+.+.+ . 
T Consensus        34 ~~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~d~~~~l~~-~-  108 (198)
T PRK00377         34 SKLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-GEAPEILFT-I-  108 (198)
T ss_pred             HHcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-echhhhHhh-c-
Confidence            4567889999999998 55 888888888763  58999999988777554    355 23222111 111111221 1 


Q ss_pred             CCcccEEEeCCCh----HHHHHhhccccCCCEEEEE
Q 020487          206 GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       206 ~~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~  237 (325)
                      ...+|.|+...+.    ..+..+.+.|+|+|+++..
T Consensus       109 ~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~  144 (198)
T PRK00377        109 NEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID  144 (198)
T ss_pred             CCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence            2369999986553    2356778889999999853

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.02  E-value=0.024  Score=51.86  Aligned_cols=140  Identities=16%  Similarity=0.274  Sum_probs=87.4

Q ss_pred             CCCCceeEEEEEecCCCCCCCCCCEEE-E----------------EcCCceeeeEEeecCCceee---C-CCCCCHHhhc
Q 020487           60 YPGLECSGTILSVGKNVSRWKVGDQVC-A----------------LLGGGGYAEKVAVPAGQVLP---V-PSGVSLKDAA  118 (325)
Q Consensus        60 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~-~----------------~~~~g~~~~~~~~~~~~~~~---~-p~~~~~~~aa  118 (325)
                      .-|.|+++-+.+|+++....-+|+.=. +                ...++.|++++.+.. .+..   + +..++...+|
T Consensus        89 ~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A  167 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSAA  167 (417)
T ss_pred             cCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHH
Confidence            468899999999999887655565532 1                111356777766654 2222   2 2222222111


Q ss_pred             cCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHH-HHHHcCCCEEEeCCCchH
Q 020487          119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLA-VCKDLGADVCINYKTEDF  196 (325)
Q Consensus       119 ~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~  196 (325)
                               ..........-++++++|+|+ |.+|..+++.+...| .+|+++.++.++.. .++.++.. .++.     
T Consensus       168 ---------v~la~~~~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~-----  231 (417)
T TIGR01035       168 ---------VELAERIFGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF-----  231 (417)
T ss_pred             ---------HHHHHHHhCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH-----
Confidence                     111112233356899999998 999999999999999 58999999887754 45567653 2221     


Q ss_pred             HHHHHHHhCCCcccEEEeCCChH
Q 020487          197 VARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       197 ~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                       ..+.+...  ++|+||+|++.+
T Consensus       232 -~~l~~~l~--~aDvVi~aT~s~  251 (417)
T TIGR01035       232 -EDLEEYLA--EADIVISSTGAP  251 (417)
T ss_pred             -HHHHHHHh--hCCEEEECCCCC
Confidence             12233332  689999999864

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.00  E-value=0.0058  Score=51.82  Aligned_cols=80  Identities=23%  Similarity=0.300  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEE-EeCCCchHHHHHHHHh--CCCcccEEEe
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-INYKTEDFVARVKEET--GGKGVDVILD  214 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~--~~~~~d~vi~  214 (325)
                      .+.+++|+|++|.+|..+++.+...|++|+++++++.+.+... +++...+ .|..+......+.+..  ...++|.++.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4789999999999999999999999999999998877665443 4443322 2433333222222211  1126899999


Q ss_pred             CCCh
Q 020487          215 CMGA  218 (325)
Q Consensus       215 ~~g~  218 (325)
                      +.|.
T Consensus        86 ~ag~   89 (255)
T PRK06057         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            8863

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=96.99  E-value=0.0061  Score=51.40  Aligned_cols=80  Identities=18%  Similarity=0.242  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh--HHHHHHcCCC-EEE--eCCCchHHH-HHHHHh-CCCcccE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGAD-VCI--NYKTEDFVA-RVKEET-GGKGVDV  211 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~--~~~~~~~g~~-~~~--~~~~~~~~~-~~~~~~-~~~~~d~  211 (325)
                      .+.+++|+|++|.+|..++..+...|++|++++++...  .+..++.+.. ..+  |..+..... .+.+.. ...++|+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47899999999999999999999999999999986532  2233344432 222  322222221 112111 1126899


Q ss_pred             EEeCCCh
Q 020487          212 ILDCMGA  218 (325)
Q Consensus       212 vi~~~g~  218 (325)
                      ++.+.|.
T Consensus        84 li~~ag~   90 (248)
T TIGR01832        84 LVNNAGI   90 (248)
T ss_pred             EEECCCC
Confidence            9998863

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.007  Score=51.35  Aligned_cols=82  Identities=23%  Similarity=0.274  Sum_probs=52.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhh-HHH----HHHcCC-C-EEE--eCCCch-HHHHHHHHhC
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEK-LAV----CKDLGA-D-VCI--NYKTED-FVARVKEETG  205 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~-~~~----~~~~g~-~-~~~--~~~~~~-~~~~~~~~~~  205 (325)
                      +..+.+++|+|+++++|..+++.+... |++|+++++++++ .+.    +++.+. + +++  |..+.. ..+.+.+...
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence            456789999999999999999887777 4899999988765 332    233332 1 223  322222 2222333332


Q ss_pred             CCcccEEEeCCCh
Q 020487          206 GKGVDVILDCMGA  218 (325)
Q Consensus       206 ~~~~d~vi~~~g~  218 (325)
                      ...+|+++.+.|.
T Consensus        85 ~g~id~li~~ag~   97 (253)
T PRK07904         85 GGDVDVAIVAFGL   97 (253)
T ss_pred             cCCCCEEEEeeec
Confidence            2479999987764

>PRK06196 oxidoreductase; Provisional

Probab=96.99  E-value=0.0056  Score=53.79  Aligned_cols=79  Identities=20%  Similarity=0.317  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEE--eCCCchHHHHHHH-HhC-CCcccEEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI--NYKTEDFVARVKE-ETG-GKGVDVIL  213 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~--~~~~~~~~~~~~~-~~~-~~~~d~vi  213 (325)
                      .+.+++|+|++|.+|..++..+...|++|++++++.++.+.+. ++..-..+  |-.+......+.+ ... ..++|++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            4679999999999999999999999999999999887665433 22211222  3333222222222 111 13689999


Q ss_pred             eCCC
Q 020487          214 DCMG  217 (325)
Q Consensus       214 ~~~g  217 (325)
                      .++|
T Consensus       105 ~nAg  108 (315)
T PRK06196        105 NNAG  108 (315)
T ss_pred             ECCC
Confidence            9987

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.98  E-value=0.006  Score=51.82  Aligned_cols=78  Identities=24%  Similarity=0.351  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCE-EE--eCCCchHHHH----HHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-CI--NYKTEDFVAR----VKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~~~~~~----~~~~~~~~  207 (325)
                      .+.++||+|++|.+|..+++.+...|++|+++.+++++.+..    ++.+... .+  |..+......    +.+..+  
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--   83 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG--   83 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC--
Confidence            368899999999999999999999999999999988655433    2344332 22  3223222222    222222  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|+++.|.|.
T Consensus        84 ~~d~vi~~ag~   94 (262)
T PRK13394         84 SVDILVSNAGI   94 (262)
T ss_pred             CCCEEEECCcc
Confidence            58999998874

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.0048  Score=52.65  Aligned_cols=77  Identities=18%  Similarity=0.299  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHHHHH----HHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVARVK----EETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~~~~----~~~~~~  207 (325)
                      ++.+++|+|++|.+|..+++.+...|++|++++++.++.+.+.    ..+.. ..+  |.........+.    +..  .
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~   86 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF--G   86 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc--C
Confidence            4789999999999999999999999999999999887655433    22322 222  333322222222    222  2


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|++|+++|
T Consensus        87 ~id~vi~~Ag   96 (263)
T PRK07814         87 RLDIVVNNVG   96 (263)
T ss_pred             CCCEEEECCC
Confidence            6899999887

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.98  E-value=0.0046  Score=52.69  Aligned_cols=77  Identities=27%  Similarity=0.407  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCC-EEE--eCCCchHH----HHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD-VCI--NYKTEDFV----ARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~-~~~--~~~~~~~~----~~~~~~~~~~~~d  210 (325)
                      ++.+++|+|+++.+|..+++.+...|++|+++.+++++.+.+.+ ++.. ..+  |-.+....    +.+.+..+  .+|
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id   82 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFG--KLD   82 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcC--CCC
Confidence            46799999999999999999999999999999998877765543 3321 222  22222211    22222222  689


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      +++++.|
T Consensus        83 ~li~~ag   89 (263)
T PRK06200         83 CFVGNAG   89 (263)
T ss_pred             EEEECCC
Confidence            9999987

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.97  E-value=0.0021  Score=51.42  Aligned_cols=88  Identities=15%  Similarity=0.163  Sum_probs=61.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+|.|+|. |.+|..+++.++.+|++|++..++..........+.. ..     ++. ++..     ..|+|+.+...
T Consensus        35 ~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~-~~-----~l~-ell~-----~aDiv~~~~pl  101 (178)
T PF02826_consen   35 RGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE-YV-----SLD-ELLA-----QADIVSLHLPL  101 (178)
T ss_dssp             TTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE-ES-----SHH-HHHH-----H-SEEEE-SSS
T ss_pred             CCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcccccce-ee-----ehh-hhcc-----hhhhhhhhhcc
Confidence            4899999998 9999999999999999999999988876645555441 11     111 2211     47999988773


Q ss_pred             -HH----H-HHhhccccCCCEEEEEec
Q 020487          219 -SY----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 -~~----~-~~~~~~l~~~g~~v~~g~  239 (325)
                       +.    + ...+..|+++..+|.++.
T Consensus       102 t~~T~~li~~~~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen  102 TPETRGLINAEFLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             STTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred             ccccceeeeeeeeeccccceEEEeccc
Confidence             21    2 455788888888887653

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.0057  Score=51.80  Aligned_cols=78  Identities=27%  Similarity=0.403  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCE--EE--eCCCchHH----HHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV--CI--NYKTEDFV----ARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~~~----~~~~~~~~~~~~d  210 (325)
                      .+.+++|+|++|.+|..+++.+...|++|+++.++.+......++....  .+  |..+....    +.+.+..+  ++|
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--~~d   91 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFG--RID   91 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhC--CCC
Confidence            3679999999999999999999999999999998876554444432211  22  32222211    22222222  689


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      +++.+.|.
T Consensus        92 ~vi~~ag~   99 (255)
T PRK06841         92 ILVNSAGV   99 (255)
T ss_pred             EEEECCCC
Confidence            99999873

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.96  E-value=0.019  Score=45.19  Aligned_cols=95  Identities=19%  Similarity=0.317  Sum_probs=63.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH--
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS--  219 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~--  219 (325)
                      +|.|+|++|-+|....+=|...|-.|++++|++.+....+..   .++.-+-.+ .+.+.+..  .++|+||++.+..  
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~---~i~q~Difd-~~~~a~~l--~g~DaVIsA~~~~~~   75 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGV---TILQKDIFD-LTSLASDL--AGHDAVISAFGAGAS   75 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccc---eeecccccC-hhhhHhhh--cCCceEEEeccCCCC
Confidence            588999999999999999999999999999999888654322   122111111 12222333  3799999998753  


Q ss_pred             --------HHHHhhccccCC--CEEEEEeccCC
Q 020487          220 --------YFQRNLGSLNID--GRLFIIGTQGG  242 (325)
Q Consensus       220 --------~~~~~~~~l~~~--g~~v~~g~~~~  242 (325)
                              ..+.+++.|+.-  .|+..+|+.+.
T Consensus        76 ~~~~~~~k~~~~li~~l~~agv~RllVVGGAGS  108 (211)
T COG2910          76 DNDELHSKSIEALIEALKGAGVPRLLVVGGAGS  108 (211)
T ss_pred             ChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence                    123455566653  48888887653

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.95  E-value=0.0072  Score=50.99  Aligned_cols=79  Identities=19%  Similarity=0.288  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCE-EE--eCCCchHHHHHHHHh-C-CCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-CI--NYKTEDFVARVKEET-G-GKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~~~~~~~~~~~-~-~~~~  209 (325)
                      ++.+++|+|++|.+|..+++.+...|++|++++++..+.+..    +..+... .+  |..+......+.+.. . ..++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999999999999999887665433    2334332 22  322222222222211 1 1268


Q ss_pred             cEEEeCCC
Q 020487          210 DVILDCMG  217 (325)
Q Consensus       210 d~vi~~~g  217 (325)
                      |.+|.+.|
T Consensus        84 d~vi~~ag   91 (253)
T PRK08217         84 NGLINNAG   91 (253)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.026  Score=48.40  Aligned_cols=75  Identities=28%  Similarity=0.450  Sum_probs=50.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCE----EEeCCCchHHH----HHHHHhCCCcc
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV----CINYKTEDFVA----RVKEETGGKGV  209 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~----~~~~~~~~~~~----~~~~~~~~~~~  209 (325)
                      +++|+|++|.+|..+++.+...|++|+++.++++..+..    +..+...    ..|-.+.....    .+.+..  .++
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~i   79 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH--GSM   79 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc--CCC
Confidence            689999999999999999999999999999887765433    2233321    23433332222    222222  268


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |+++.+.|.
T Consensus        80 d~lv~~ag~   88 (272)
T PRK07832         80 DVVMNIAGI   88 (272)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.94  E-value=0.0091  Score=51.23  Aligned_cols=77  Identities=18%  Similarity=0.235  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCEEE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVCI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g--~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .++++||+|+++  ++|.++++.+...|++|+++.++++..+.+    ++.|....+  |-.+...    .+.+.+..+ 
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g-   84 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG-   84 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC-
Confidence            478899999975  899999999999999999988765322222    234533333  3333222    222223333 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       .+|+++++.|
T Consensus        85 -~iD~lVnnAG   94 (271)
T PRK06505         85 -KLDFVVHAIG   94 (271)
T ss_pred             -CCCEEEECCc
Confidence             6899999987

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.94  E-value=0.0082  Score=50.85  Aligned_cols=76  Identities=18%  Similarity=0.236  Sum_probs=51.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC-EEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      +.++||+|++|.+|..+++.+...|++|++++++..+...+.+    .+.. .++..+-.+ ...+.+... .++|++|.
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~-~~id~vi~   79 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD-AIDRAQAAE-WDVDVLLN   79 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC-HHHHHHHhc-CCCCEEEE
Confidence            3579999999999999999999999999999988776554432    2322 122112222 123333332 37999999


Q ss_pred             CCC
Q 020487          215 CMG  217 (325)
Q Consensus       215 ~~g  217 (325)
                      |.|
T Consensus        80 ~ag   82 (257)
T PRK09291         80 NAG   82 (257)
T ss_pred             CCC
Confidence            987

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.0063  Score=51.61  Aligned_cols=78  Identities=23%  Similarity=0.348  Sum_probs=52.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC-EEE--eCCCch-HH---HHHHHHhCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCI--NYKTED-FV---ARVKEETGG  206 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~-~~~--~~~~~~-~~---~~~~~~~~~  206 (325)
                      ..+.+++|+|++|.+|..++..+...|++|+++.++.++.+.+..    .+.. .++  |..... ..   ..+.+..  
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--   84 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA--   84 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc--
Confidence            347899999999999999999999999999999998887654432    1221 222  222221 11   1222222  


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                      ..+|+++.+.|
T Consensus        85 ~~~d~li~~ag   95 (258)
T PRK06949         85 GTIDILVNNSG   95 (258)
T ss_pred             CCCCEEEECCC
Confidence            26899999988

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.01  Score=50.82  Aligned_cols=77  Identities=22%  Similarity=0.290  Sum_probs=53.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEE--eCCCchHH----HHHHHHhCCCcccEE
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI--NYKTEDFV----ARVKEETGGKGVDVI  212 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~--~~~~~~~~----~~~~~~~~~~~~d~v  212 (325)
                      +.+++|+|++|.+|..+++.+...|++|+++.+++++.+.+. .++....+  |-.+....    +.+.+..  .++|++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id~l   82 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADL--GPIDVL   82 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHc--CCCCEE
Confidence            578999999999999999988889999999999888765543 34412222  33332222    2222222  268999


Q ss_pred             EeCCCh
Q 020487          213 LDCMGA  218 (325)
Q Consensus       213 i~~~g~  218 (325)
                      +.+.|.
T Consensus        83 i~~ag~   88 (273)
T PRK07825         83 VNNAGV   88 (273)
T ss_pred             EECCCc
Confidence            999873

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.93  E-value=0.0057  Score=52.02  Aligned_cols=209  Identities=15%  Similarity=0.140  Sum_probs=115.0

Q ss_pred             CCCeEEEEEeeeecChhhhhhh--hCCCCCCCCCCCCCC-CceeEEEEEecC-CCCCCCCCCEEEEEcCC---ceeeeE-
Q 020487           26 KDDEVLIKVEATALNRADTLQR--KGSYPPPKGASPYPG-LECSGTILSVGK-NVSRWKVGDQVCALLGG---GGYAEK-   97 (325)
Q Consensus        26 ~~~ev~v~v~~~~i~~~D~~~~--~g~~~~~~~~p~~~G-~e~~G~V~~vG~-~~~~~~~Gd~V~~~~~~---g~~~~~-   97 (325)
                      ..+||+|+.-+..-+..|-..+  .|..-.. +..-.++ .|.+=.|.+-=+ ....|+.|...+.+-+-   ....+- 
T Consensus        29 ~GheVlVe~gAG~gsg~~D~~Y~~aGA~Iv~-ta~~vw~~~dmvvKvKEP~~~EY~ylregqiLftyLHLA~~~~lt~~l  107 (371)
T COG0686          29 HGHEVLVETGAGAGSGFDDDDYEAAGAKIVA-TAAEVWAEADMVVKVKEPLPSEYPYLREGQILFTYLHLAASPELTEAL  107 (371)
T ss_pred             CCcEEEEecCCcCCCCCChHHHHHcCCEEec-CHHHhhcccceEEEecCCChhhhhhhcCCcEEEEEeeecCChHHHHHH
Confidence            4678999988876654332222  2211110 0011233 555555544222 23458889998876531   100000 


Q ss_pred             ----EeecCCceeeCCC-C----CCHHhhccCcchHHHHHHHHHhh----------cCCCCCCEEEEEcCCchHHHHHHH
Q 020487           98 ----VAVPAGQVLPVPS-G----VSLKDAAAFPEVACTVWSTVFMT----------SHLSPGESFLVHGGSSGIGTFAIQ  158 (325)
Q Consensus        98 ----~~~~~~~~~~~p~-~----~~~~~aa~l~~~~~~a~~~l~~~----------~~~~~~~~vli~g~~g~~G~~~~~  158 (325)
                          +..-.--.+.+|+ +    -++.+.|.-...-..|++.-...          .++.++ +|.|+|+ |.+|.-++.
T Consensus       108 ~~~gvtaIayETV~~~~g~lPlLaPMSeVAGrla~q~Ga~~lek~~GG~GvllgGvpGV~~~-kv~iiGG-GvvgtnaAk  185 (371)
T COG0686         108 LKSGVTAIAYETVQLPDGNLPLLAPMSEVAGRLAAQAGAYYLEKTNGGKGVLLGGVPGVLPA-KVVVLGG-GVVGTNAAK  185 (371)
T ss_pred             HHcCcceEEEEEEEcCCCCCcccchHHHHhhhHHHHHHHHHHHhccCCceeEecCCCCCCCc-cEEEECC-ccccchHHH
Confidence                0000001122333 1    22344443333344444421111          122333 4777887 999999999


Q ss_pred             HHHHCCCEEEEEecChhhHHHHHHcCCCE--EEeCCCchHHHHHHHHhCCCcccEEEeCCC--hH-----HHHHhhcccc
Q 020487          159 MGKCQGVRVFVTAGSEEKLAVCKDLGADV--CINYKTEDFVARVKEETGGKGVDVILDCMG--AS-----YFQRNLGSLN  229 (325)
Q Consensus       159 ~a~~~g~~v~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g--~~-----~~~~~~~~l~  229 (325)
                      +|..+|++|++.+.+..|++.+..+-...  .+-++...+    .+..  +..|++|.++=  ++     .+++.++.|+
T Consensus       186 iA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~i----ee~v--~~aDlvIgaVLIpgakaPkLvt~e~vk~Mk  259 (371)
T COG0686         186 IAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNI----EEAV--KKADLVIGAVLIPGAKAPKLVTREMVKQMK  259 (371)
T ss_pred             HHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHH----HHHh--hhccEEEEEEEecCCCCceehhHHHHHhcC
Confidence            99999999999999999999888643333  333333333    3332  25799998752  21     2578899999


Q ss_pred             CCCEEEEEeccCCc
Q 020487          230 IDGRLFIIGTQGGA  243 (325)
Q Consensus       230 ~~g~~v~~g~~~~~  243 (325)
                      ||+.+|++..-.+.
T Consensus       260 pGsVivDVAiDqGG  273 (371)
T COG0686         260 PGSVIVDVAIDQGG  273 (371)
T ss_pred             CCcEEEEEEEcCCC
Confidence            99999988654443

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.92  E-value=0.0035  Score=49.64  Aligned_cols=97  Identities=19%  Similarity=0.187  Sum_probs=67.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCC-----------------CchHHHHHHH
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK-----------------TEDFVARVKE  202 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~-----------------~~~~~~~~~~  202 (325)
                      .-+++|+|+ |.+|..++++++.+|++|++.+...++.+..+..++..+....                 -......+.+
T Consensus        20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~   98 (168)
T PF01262_consen   20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE   98 (168)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred             CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence            467999998 9999999999999999999999999888888877765433210                 1223344444


Q ss_pred             HhCCCcccEEEeCC--Ch---HH--HHHhhccccCCCEEEEEec
Q 020487          203 ETGGKGVDVILDCM--GA---SY--FQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       203 ~~~~~~~d~vi~~~--g~---~~--~~~~~~~l~~~g~~v~~g~  239 (325)
                      ...  .+|++|.+.  .+   +.  ....++.|+++..++++..
T Consensus        99 ~i~--~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~  140 (168)
T PF01262_consen   99 FIA--PADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC  140 (168)
T ss_dssp             HHH--H-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred             HHh--hCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence            443  579988543  12   11  3677888999999998844

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.007  Score=50.98  Aligned_cols=78  Identities=26%  Similarity=0.400  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE-EE--eCCCchHH----HHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTEDFV----ARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~~~----~~~~~~~~~~~~d  210 (325)
                      ++.+++|+|++|.+|..+++.+...|++|++++++++...... +++... .+  |..+....    +.+.+..+  ++|
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id   82 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFG--RLD   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC--CCC
Confidence            4678999999999999999999999999999998876655443 455432 22  22222212    22222222  689


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      +++.+.|.
T Consensus        83 ~vi~~ag~   90 (249)
T PRK06500         83 AVFINAGV   90 (249)
T ss_pred             EEEECCCC
Confidence            99998873

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.92  E-value=0.0026  Score=58.91  Aligned_cols=96  Identities=18%  Similarity=0.183  Sum_probs=65.4

Q ss_pred             hhcCCCCCCEEE----EEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC-EEEeCCCchHHHHHHHHhCCC
Q 020487          133 MTSHLSPGESFL----VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       133 ~~~~~~~~~~vl----i~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      ...++++|+++|    ++|++|.+|.+++++++..|++|+.+...+.+....+..+.+ .++|.+...+.+.+....   
T Consensus        27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~---  103 (450)
T PRK08261         27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITDPADLKALY---  103 (450)
T ss_pred             cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCCHHHHHHHH---
Confidence            445678899988    888889999999999999999999987665533333333333 355555444444443321   


Q ss_pred             cccEEEeCCChHHHHHhhccccCCCEEEEEeccCC
Q 020487          208 GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       208 ~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                                 ..+...++.|.++|+++.++....
T Consensus       104 -----------~~~~~~l~~l~~~griv~i~s~~~  127 (450)
T PRK08261        104 -----------EFFHPVLRSLAPCGRVVVLGRPPE  127 (450)
T ss_pred             -----------HHHHHHHHhccCCCEEEEEccccc
Confidence                       234566778888899988876543

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.90  E-value=0.0075  Score=51.87  Aligned_cols=78  Identities=27%  Similarity=0.323  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC--EEE--eCCCchHHHH----HHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD--VCI--NYKTEDFVAR----VKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~--~~~--~~~~~~~~~~----~~~~~~~~~~d  210 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+.+....  ..+  |-.+......    +.+..+  ++|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~--~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFG--PID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC--CCC
Confidence            357899999999999999999999999999999998877665543221  122  3333222212    222222  589


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      +++.+.|.
T Consensus        81 ~vv~~ag~   88 (277)
T PRK06180         81 VLVNNAGY   88 (277)
T ss_pred             EEEECCCc
Confidence            99999875

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.90  E-value=0.014  Score=46.10  Aligned_cols=96  Identities=15%  Similarity=0.145  Sum_probs=61.9

Q ss_pred             CcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHH
Q 020487          120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR  199 (325)
Q Consensus       120 l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  199 (325)
                      .|+....+...+.....--.+.+++|+|++..+|..++..+...|++|+++.++.+                       +
T Consensus        24 ~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~-----------------------~   80 (168)
T cd01080          24 IPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK-----------------------N   80 (168)
T ss_pred             cCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch-----------------------h
Confidence            34433344443433322246899999999334699899999999999988886531                       1


Q ss_pred             HHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487          200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       200 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      +.+...  .+|+||.+++.+.+ --.+.++++-.+++++.+.
T Consensus        81 l~~~l~--~aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr  119 (168)
T cd01080          81 LKEHTK--QADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR  119 (168)
T ss_pred             HHHHHh--hCCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence            222222  58999999998653 2223567777777887654

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK06194 hypothetical protein; Provisional

Probab=96.90  E-value=0.0073  Score=52.17  Aligned_cols=77  Identities=19%  Similarity=0.367  Sum_probs=50.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H---cCCCE-EEeCC--CchHHHH----HHHHhCCCc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LGADV-CINYK--TEDFVAR----VKEETGGKG  208 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g~~~-~~~~~--~~~~~~~----~~~~~~~~~  208 (325)
                      +.++||+|++|.+|..+++.+...|++|++++++.+..+... +   .+... .+..+  +......    +.+..  .+
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~--g~   83 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF--GA   83 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc--CC
Confidence            578999999999999999999999999999998876554332 2   23321 23222  2211111    12222  25


Q ss_pred             ccEEEeCCCh
Q 020487          209 VDVILDCMGA  218 (325)
Q Consensus       209 ~d~vi~~~g~  218 (325)
                      +|+++.+.|.
T Consensus        84 id~vi~~Ag~   93 (287)
T PRK06194         84 VHLLFNNAGV   93 (287)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>PRK05854 short chain dehydrogenase; Provisional

Probab=96.89  E-value=0.0068  Score=53.24  Aligned_cols=80  Identities=19%  Similarity=0.282  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc-----CCC-EEE--eCCCchHHHHHHHHh--CCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL-----GAD-VCI--NYKTEDFVARVKEET--GGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~-~~~--~~~~~~~~~~~~~~~--~~~  207 (325)
                      .+.+++|+|+++++|..++..+...|++|++++++.++.+.+. ++     +.. ..+  |-.+......+.+..  ...
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            3689999999999999999999999999999999887654432 11     111 122  333322222222211  123


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      .+|++|+++|.
T Consensus        93 ~iD~li~nAG~  103 (313)
T PRK05854         93 PIHLLINNAGV  103 (313)
T ss_pred             CccEEEECCcc
Confidence            68999998873

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.88  E-value=0.019  Score=48.89  Aligned_cols=77  Identities=18%  Similarity=0.348  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCh---hhHHHHH-Hc-CCC-EE--EeCCCchHH----HHHHHHh
Q 020487          139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSE---EKLAVCK-DL-GAD-VC--INYKTEDFV----ARVKEET  204 (325)
Q Consensus       139 ~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~---~~~~~~~-~~-g~~-~~--~~~~~~~~~----~~~~~~~  204 (325)
                      .+.+++|+|++  +++|.++++.+...|++|+++.++.   ++.+.+. ++ +.. ..  .|-.+....    +.+.+..
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            47889999996  7999999999999999999987653   2333332 33 221 12  233332222    2222223


Q ss_pred             CCCcccEEEeCCC
Q 020487          205 GGKGVDVILDCMG  217 (325)
Q Consensus       205 ~~~~~d~vi~~~g  217 (325)
                      +  .+|++++|.|
T Consensus        86 g--~ld~lv~nag   96 (257)
T PRK08594         86 G--VIHGVAHCIA   96 (257)
T ss_pred             C--CccEEEECcc
Confidence            3  6899998876

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.0077  Score=51.00  Aligned_cols=78  Identities=24%  Similarity=0.329  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-E--EeCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.+++|+|+++.+|..+++.+...|++|+++.++.++.+.+.    ..+... .  .|..+...    .+.+.+..+  
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--   85 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG--   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC--
Confidence            4789999999999999999999999999999999887665443    223221 2  23333222    222223333  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|+++.+.|.
T Consensus        86 ~id~lv~~ag~   96 (253)
T PRK05867         86 GIDIAVCNAGI   96 (253)
T ss_pred             CCCEEEECCCC
Confidence            68999998873

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.0086  Score=50.90  Aligned_cols=78  Identities=23%  Similarity=0.312  Sum_probs=52.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cC-CC-EE--EeCCCchHHHHH-HHHhC--CCcccEE
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LG-AD-VC--INYKTEDFVARV-KEETG--GKGVDVI  212 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g-~~-~~--~~~~~~~~~~~~-~~~~~--~~~~d~v  212 (325)
                      .++||+|++|.+|..+++.+...|++|++++++.+..+.+.. .+ .. .+  .|-.+......+ .+...  ..++|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            469999999999999999999999999999998887766543 32 11 22  233332222222 22211  2368999


Q ss_pred             EeCCCh
Q 020487          213 LDCMGA  218 (325)
Q Consensus       213 i~~~g~  218 (325)
                      +.|+|.
T Consensus        82 i~~ag~   87 (260)
T PRK08267         82 FNNAGI   87 (260)
T ss_pred             EECCCC
Confidence            999874

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.0074  Score=51.21  Aligned_cols=77  Identities=16%  Similarity=0.213  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH---cCCC-EEE--eCCCch-HH---HHHHHHhCCCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD---LGAD-VCI--NYKTED-FV---ARVKEETGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~---~g~~-~~~--~~~~~~-~~---~~~~~~~~~~~  208 (325)
                      .+.+++|+|++|.+|..+++.+...|++|+++++++++.+..++   .+.. ..+  |..+.. ..   +.+.+..  .+
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~   83 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF--GR   83 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc--CC
Confidence            36789999999999999999999999999999988776533332   3332 222  222222 11   1222222  26


Q ss_pred             ccEEEeCCC
Q 020487          209 VDVILDCMG  217 (325)
Q Consensus       209 ~d~vi~~~g  217 (325)
                      +|++|.+.|
T Consensus        84 id~vi~~ag   92 (258)
T PRK08628         84 IDGLVNNAG   92 (258)
T ss_pred             CCEEEECCc
Confidence            899999988

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.84  E-value=0.0078  Score=50.74  Aligned_cols=80  Identities=25%  Similarity=0.326  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcC--CC-EEE--eCCCchHHHHH-HHH-hCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG--AD-VCI--NYKTEDFVARV-KEE-TGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g--~~-~~~--~~~~~~~~~~~-~~~-~~~~~~d  210 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+. .+.  .. ..+  |..+......+ .+. .....+|
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   83 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD   83 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            3578999999999999999999999999999999987765543 222  11 122  22222222222 111 1112689


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      ++|.+.|.
T Consensus        84 ~vi~~ag~   91 (251)
T PRK07231         84 ILVNNAGT   91 (251)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.84  E-value=0.0083  Score=50.81  Aligned_cols=78  Identities=17%  Similarity=0.255  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh--HHHHHHcCCCE-E--EeCCCchHHHHHH----HHhCCCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGADV-C--INYKTEDFVARVK----EETGGKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~--~~~~~~~g~~~-~--~~~~~~~~~~~~~----~~~~~~~~  209 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++.++...  .+..++.+.+. .  .|-.+......+.    +..+  ++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g--~i   84 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMG--HI   84 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcC--CC
Confidence            47899999999999999999999999999998875432  22333444332 2  2333332222222    2233  68


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |+++++.|.
T Consensus        85 D~lv~~ag~   93 (251)
T PRK12481         85 DILINNAGI   93 (251)
T ss_pred             CEEEECCCc
Confidence            999999873

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.84  E-value=0.021  Score=50.10  Aligned_cols=99  Identities=23%  Similarity=0.188  Sum_probs=67.5

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHH----HcCCCEEEeCCCchHHHHHHHHhCC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~  206 (325)
                      +...++++++||.+|+ | .|..++.+++..+.  +|++++.+++..+.++    ..|.+.+.....+ .....   ...
T Consensus        74 ~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD-~~~~~---~~~  147 (322)
T PRK13943         74 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGD-GYYGV---PEF  147 (322)
T ss_pred             HhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCC-hhhcc---ccc
Confidence            4556789999999997 5 59999999988763  6999998888665544    3565443322221 11111   112


Q ss_pred             CcccEEEeCCChHHH-HHhhccccCCCEEEEE
Q 020487          207 KGVDVILDCMGASYF-QRNLGSLNIDGRLFII  237 (325)
Q Consensus       207 ~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~  237 (325)
                      ..||+|+.+.+.... ...++.|+++|+++..
T Consensus       148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence            369999998886543 4567889999998764

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.82  E-value=0.041  Score=44.61  Aligned_cols=77  Identities=26%  Similarity=0.354  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-c----CCCEE-EeCCCchHHHHHHHHhCCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L----GADVC-INYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~----g~~~~-~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      .+.+++|+|++|.+|..++..+...|++|+++.++.++.+.+.+ +    +.... .+..+   .+.+.+..  .++|+|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~--~~~diV  101 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSD---DAARAAAI--KGADVV  101 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC---HHHHHHHH--hcCCEE
Confidence            46799999999999999998888889999999999877655432 2    22211 12222   22223333  268999


Q ss_pred             EeCCChHH
Q 020487          213 LDCMGASY  220 (325)
Q Consensus       213 i~~~g~~~  220 (325)
                      |.+.+...
T Consensus       102 i~at~~g~  109 (194)
T cd01078         102 FAAGAAGV  109 (194)
T ss_pred             EECCCCCc
Confidence            99887544

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.81  E-value=0.012  Score=49.93  Aligned_cols=78  Identities=28%  Similarity=0.473  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.+++|+|+++.+|..++..+...|++|+++++++++.+.+.    ..+.+. .+  |..+...    .+.+.+..+  
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--   82 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG--   82 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC--
Confidence            3678999999999999999999999999999999887765443    233322 22  3223222    222222232  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      .+|+++.++|.
T Consensus        83 ~id~li~~ag~   93 (254)
T PRK07478         83 GLDIAFNNAGT   93 (254)
T ss_pred             CCCEEEECCCC
Confidence            68999998873

>PRK07890 short chain dehydrogenase; Provisional

Probab=96.80  E-value=0.0097  Score=50.44  Aligned_cols=78  Identities=24%  Similarity=0.351  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H---cCCC-EEE--eCCCchHH----HHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LGAD-VCI--NYKTEDFV----ARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g~~-~~~--~~~~~~~~----~~~~~~~~~~  207 (325)
                      .+.+++|+|+++.+|..++..+...|++|+++.+++++.+.+. +   .+.. ..+  |..+....    +.+.+..+  
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--   81 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG--   81 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC--
Confidence            4678999999999999999999999999999998887654443 2   2322 122  32222211    22222233  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      .+|++|.+.|.
T Consensus        82 ~~d~vi~~ag~   92 (258)
T PRK07890         82 RVDALVNNAFR   92 (258)
T ss_pred             CccEEEECCcc
Confidence            58999998863

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.80  E-value=0.0091  Score=50.61  Aligned_cols=77  Identities=22%  Similarity=0.286  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC--EEE--eCCCchH----HHHHHHHhCCCc
Q 020487          139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD--VCI--NYKTEDF----VARVKEETGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~--~~~--~~~~~~~----~~~~~~~~~~~~  208 (325)
                      .+++++|+|++  +++|.++++.+...|++|+++.++++..+.++++...  ..+  |-.+...    .+.+.+..+  .
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g--~   83 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVG--K   83 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhC--C
Confidence            47899999998  6999999999999999999998875433444443221  122  3222222    222333333  6


Q ss_pred             ccEEEeCCC
Q 020487          209 VDVILDCMG  217 (325)
Q Consensus       209 ~d~vi~~~g  217 (325)
                      +|+++++.|
T Consensus        84 iD~lv~nAg   92 (252)
T PRK06079         84 IDGIVHAIA   92 (252)
T ss_pred             CCEEEEccc
Confidence            899999887

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.80  E-value=0.032  Score=44.97  Aligned_cols=99  Identities=18%  Similarity=0.235  Sum_probs=61.3

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHHcCCCEE-EeCCCchHHHHHHHHhCCCccc
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      ...++++++||.+|+ |.-+ .+..+++..  ..+|++++.++..    ...+...+ .+.........+.+.+...++|
T Consensus        27 ~~~i~~g~~VLDiG~-GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D  100 (188)
T TIGR00438        27 FKLIKPGDTVLDLGA-APGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDEEVLNKIRERVGDDKVD  100 (188)
T ss_pred             hcccCCCCEEEEecC-CCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCChhHHHHHHHHhCCCCcc
Confidence            345689999999997 4434 444444443  3489999988754    11233222 1322333344555556666899


Q ss_pred             EEEeCC-----C-------------hHHHHHhhccccCCCEEEEEe
Q 020487          211 VILDCM-----G-------------ASYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       211 ~vi~~~-----g-------------~~~~~~~~~~l~~~g~~v~~g  238 (325)
                      +|+...     |             ...+..+.+.|+++|+++...
T Consensus       101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438       101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            999521     2             123567788999999999864

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=96.80  E-value=0.028  Score=44.53  Aligned_cols=99  Identities=20%  Similarity=0.275  Sum_probs=67.0

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHH----HcCCCEE--EeCCCchHHHHHHHHhC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCK----DLGADVC--INYKTEDFVARVKEETG  205 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~----~~g~~~~--~~~~~~~~~~~~~~~~~  205 (325)
                      .+..++||+.++=.|+  +.|...++++... ..+|+++.+++++.+..+    ++|.+.+  +......   .+.   +
T Consensus        28 s~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~---~L~---~   99 (187)
T COG2242          28 SKLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPE---ALP---D   99 (187)
T ss_pred             HhhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchH---hhc---C
Confidence            3457799998888887  2466667777443 469999999999876654    5787643  3222221   221   2


Q ss_pred             CCcccEEEeCCCh---HHHHHhhccccCCCEEEEEec
Q 020487          206 GKGVDVILDCMGA---SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       206 ~~~~d~vi~~~g~---~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ...+|.+|---|.   ..++..++.|+++|++|.-..
T Consensus       100 ~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~nai  136 (187)
T COG2242         100 LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANAI  136 (187)
T ss_pred             CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEee
Confidence            2258999866553   236888999999999997654

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=96.79  E-value=0.0094  Score=52.52  Aligned_cols=79  Identities=23%  Similarity=0.344  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcC---CC-EEE--eCCCchHHHHHHHHh--CCCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG---AD-VCI--NYKTEDFVARVKEET--GGKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g---~~-~~~--~~~~~~~~~~~~~~~--~~~~~  209 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+. ++.   .. ..+  |-.+......+.+..  ....+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            4678999999999999999999989999999999887665443 332   11 122  333322222222211  12358


Q ss_pred             cEEEeCCC
Q 020487          210 DVILDCMG  217 (325)
Q Consensus       210 d~vi~~~g  217 (325)
                      |++|+++|
T Consensus        85 D~li~nAg   92 (322)
T PRK07453         85 DALVCNAA   92 (322)
T ss_pred             cEEEECCc
Confidence            99999987

>PRK12937 short chain dehydrogenase; Provisional

Probab=96.78  E-value=0.026  Score=47.40  Aligned_cols=36  Identities=25%  Similarity=0.316  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      ++.+++|+|++|.+|..+++.+...|++++++.++.
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~   39 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGS   39 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCC
Confidence            467899999999999999999999999998877654

>PRK07576 short chain dehydrogenase; Provisional

Probab=96.78  E-value=0.012  Score=50.28  Aligned_cols=79  Identities=23%  Similarity=0.287  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHHH-HHHHh-CCCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVAR-VKEET-GGKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~~-~~~~~-~~~~~  209 (325)
                      ++.+++|+|++|.+|..+++.+...|++|+++.++.++.+...    ..+.. ..+  |-.+...... +.+.. ...++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i   87 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI   87 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999998877654332    22322 222  3332222222 22211 11268


Q ss_pred             cEEEeCCC
Q 020487          210 DVILDCMG  217 (325)
Q Consensus       210 d~vi~~~g  217 (325)
                      |++|.+.|
T Consensus        88 D~vi~~ag   95 (264)
T PRK07576         88 DVLVSGAA   95 (264)
T ss_pred             CEEEECCC
Confidence            99998875

>PRK04148 hypothetical protein; Provisional

Probab=96.78  E-value=0.016  Score=43.47  Aligned_cols=80  Identities=15%  Similarity=0.081  Sum_probs=56.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .++.++++.|. | .|..++..+...|.+|++++.++...+.+++.+.+.+.+.-..... .   +.  +++|++..+-.
T Consensus        15 ~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~-~---~y--~~a~liysirp   86 (134)
T PRK04148         15 GKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL-E---IY--KNAKLIYSIRP   86 (134)
T ss_pred             ccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH-H---HH--hcCCEEEEeCC
Confidence            45688999998 6 8876777777889999999999999998888876655432221111 1   11  26888988887


Q ss_pred             hHHHHHhh
Q 020487          218 ASYFQRNL  225 (325)
Q Consensus       218 ~~~~~~~~  225 (325)
                      ...++..+
T Consensus        87 p~el~~~~   94 (134)
T PRK04148         87 PRDLQPFI   94 (134)
T ss_pred             CHHHHHHH
Confidence            76654333

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.77  E-value=0.0031  Score=51.62  Aligned_cols=109  Identities=20%  Similarity=0.197  Sum_probs=67.0

Q ss_pred             CcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHH----HcCCCEE-EeCC
Q 020487          120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCK----DLGADVC-INYK  192 (325)
Q Consensus       120 l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~----~~g~~~~-~~~~  192 (325)
                      +..+...|.  +.+...++||++||-+|+  +.|+.++-+++..|.  +|+.+...++-.+.++    .++.+.+ +...
T Consensus        55 is~P~~~a~--~l~~L~l~pg~~VLeIGt--GsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~g  130 (209)
T PF01135_consen   55 ISAPSMVAR--MLEALDLKPGDRVLEIGT--GSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVG  130 (209)
T ss_dssp             E--HHHHHH--HHHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES
T ss_pred             chHHHHHHH--HHHHHhcCCCCEEEEecC--CCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEc
Confidence            333444444  346677999999999996  457888888887764  6899998877554443    4555432 2111


Q ss_pred             CchHHHHHHHHhCCCcccEEEeCCChHHH-HHhhccccCCCEEEEE
Q 020487          193 TEDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFII  237 (325)
Q Consensus       193 ~~~~~~~~~~~~~~~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~  237 (325)
                      +...     -+....+||.|+-+.+.+.. ...+++|++||++|..
T Consensus       131 dg~~-----g~~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  131 DGSE-----GWPEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             -GGG-----TTGGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             chhh-----ccccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence            1110     01112379999998887654 5678999999999985

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK06398 aldose dehydrogenase; Validated

Probab=96.76  E-value=0.0015  Score=55.66  Aligned_cols=72  Identities=24%  Similarity=0.369  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC-EEEeCCCchHHHH----HHHHhCCCcccEEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVAR----VKEETGGKGVDVIL  213 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~----~~~~~~~~~~d~vi  213 (325)
                      .+.++||+|+++.+|.+++..+...|++|+++.+++.+..     ... ...|-.+......    +.+..+  .+|+++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~~--~id~li   77 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN-----DVDYFKVDVSNKEQVIKGIDYVISKYG--RIDILV   77 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC-----ceEEEEccCCCHHHHHHHHHHHHHHcC--CCCEEE
Confidence            3679999999999999999999999999999998764422     111 1123333222222    222222  589999


Q ss_pred             eCCC
Q 020487          214 DCMG  217 (325)
Q Consensus       214 ~~~g  217 (325)
                      ++.|
T Consensus        78 ~~Ag   81 (258)
T PRK06398         78 NNAG   81 (258)
T ss_pred             ECCC
Confidence            9887

>PRK06720 hypothetical protein; Provisional

Probab=96.75  E-value=0.022  Score=45.03  Aligned_cols=78  Identities=24%  Similarity=0.383  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCE-EEeCC--CchHHHH----HHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-CINYK--TEDFVAR----VKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~~~~--~~~~~~~----~~~~~~~~  207 (325)
                      .+..++|+|+++++|..++..+...|++|+++.++.+..+..    .+.+... .+..+  .......    +.+..+  
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G--   92 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFS--   92 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence            478999999999999999999988999999999887655332    2234332 22222  2111111    122222  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|+++++.|.
T Consensus        93 ~iDilVnnAG~  103 (169)
T PRK06720         93 RIDMLFQNAGL  103 (169)
T ss_pred             CCCEEEECCCc
Confidence            58999988874

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.74  E-value=0.016  Score=48.17  Aligned_cols=75  Identities=17%  Similarity=0.265  Sum_probs=51.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEE-EeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +++|+|+++.+|..+++.+...|++|+++.++.++.+.+. +++...+ .|-.+......+.+...+ .+|+++++.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPH-HLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhh-cCcEEEECCC
Confidence            5899999999999999999989999999999887765543 4444322 233333333333333322 5899998864

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=96.74  E-value=0.015  Score=49.64  Aligned_cols=105  Identities=21%  Similarity=0.277  Sum_probs=73.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcC-CC----EEEeCCC----chHHHHHHHHhCCCc
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG-AD----VCINYKT----EDFVARVKEETGGKG  208 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g-~~----~~~~~~~----~~~~~~~~~~~~~~~  208 (325)
                      ..+..|+|+|+.+++|..++.-+...|.+|++.+.+++..+.++..- ..    ..+|-..    ....+.+++..+..+
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g  106 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG  106 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence            34667999999999999999999999999999998877766655321 11    1233232    234566667788888


Q ss_pred             ccEEEeCCChH---------------------------HHHHhhcccc-CCCEEEEEeccCC
Q 020487          209 VDVILDCMGAS---------------------------YFQRNLGSLN-IDGRLFIIGTQGG  242 (325)
Q Consensus       209 ~d~vi~~~g~~---------------------------~~~~~~~~l~-~~g~~v~~g~~~~  242 (325)
                      ...+++++|..                           .....+..++ ..||+|.+++..+
T Consensus       107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G  168 (322)
T KOG1610|consen  107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG  168 (322)
T ss_pred             ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc
Confidence            99999999821                           1123334443 4699999877665

>PRK07063 short chain dehydrogenase; Provisional

Probab=96.73  E-value=0.013  Score=49.84  Aligned_cols=78  Identities=23%  Similarity=0.329  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc-----CCC-EEE--eCCCchH----HHHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL-----GAD-VCI--NYKTEDF----VARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~-~~~--~~~~~~~----~~~~~~~~~  205 (325)
                      .+.+++|+|+++.+|..+++.+...|++|+++++++++.+... ++     +.. ..+  |..+...    .+.+.+..+
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3678999999999999999999999999999998877665443 22     221 122  2222221    222222333


Q ss_pred             CCcccEEEeCCCh
Q 020487          206 GKGVDVILDCMGA  218 (325)
Q Consensus       206 ~~~~d~vi~~~g~  218 (325)
                        .+|+++.+.|.
T Consensus        86 --~id~li~~ag~   96 (260)
T PRK07063         86 --PLDVLVNNAGI   96 (260)
T ss_pred             --CCcEEEECCCc
Confidence              68999999873

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.72  E-value=0.015  Score=47.89  Aligned_cols=98  Identities=20%  Similarity=0.098  Sum_probs=65.6

Q ss_pred             HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHHH----cCCCE--EEeCCCchHHHHHHHH
Q 020487          132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGADV--CINYKTEDFVARVKEE  203 (325)
Q Consensus       132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~  203 (325)
                      .....++++++||-+|+  +.|..++.+++..+  .+|+.++.+++-.+.+++    .+...  ++..+....      .
T Consensus        69 ~~~l~~~~g~~VLdIG~--GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~------~  140 (212)
T PRK13942         69 CELLDLKEGMKVLEIGT--GSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLG------Y  140 (212)
T ss_pred             HHHcCCCCcCEEEEECC--cccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC------C
Confidence            35667899999999996  45777777887765  599999999887766553    44332  222222110      1


Q ss_pred             hCCCcccEEEeCCChH-HHHHhhccccCCCEEEEE
Q 020487          204 TGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       204 ~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~  237 (325)
                      .....||.|+-+.... ......+.|++||+++..
T Consensus       141 ~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        141 EENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             CcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence            1234799997655433 346677899999998875

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.72  E-value=0.013  Score=49.13  Aligned_cols=80  Identities=21%  Similarity=0.339  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCE-E--EeCCCch-HHHHHHHHhC-CCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-C--INYKTED-FVARVKEETG-GKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~--~~~~~~~-~~~~~~~~~~-~~~~  209 (325)
                      ++.+++|+|++|.+|..+++.+...|++|+++.++.++.+..    +..+... .  .|..+.. ....+.+... -..+
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            357899999999999999999999999999999987765433    2334322 2  2333322 2222222110 1257


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |.++.++|.
T Consensus        84 d~vi~~ag~   92 (246)
T PRK05653         84 DILVNNAGI   92 (246)
T ss_pred             CEEEECCCc
Confidence            999998854

>PRK06172 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.011  Score=50.00  Aligned_cols=78  Identities=21%  Similarity=0.334  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCC-EEE--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGAD-VCI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~-~~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.+++|+|++|.+|..+++.+...|++|+++.++.++.+..    ++.+.. ..+  |..+...    .+.+.+..+  
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g--   83 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYG--   83 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC--
Confidence            368999999999999999999999999999999988765433    233332 222  2222221    222233333  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|+++.+.|.
T Consensus        84 ~id~li~~ag~   94 (253)
T PRK06172         84 RLDYAFNNAGI   94 (253)
T ss_pred             CCCEEEECCCC
Confidence            68999998873

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.72  E-value=0.027  Score=47.44  Aligned_cols=101  Identities=20%  Similarity=0.297  Sum_probs=61.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh-hhH----HHHHHcCCC-EEE--eCCCchH----HHHHHHHhCCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKL----AVCKDLGAD-VCI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~-~~~----~~~~~~g~~-~~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      +.++||+|++|.+|..+++.+...|++|+.+.++. +..    ...++.+.. ..+  |......    .+.+.+..+  
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--   83 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG--   83 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC--
Confidence            67899999999999999998889999988776542 222    122333332 122  2222221    122222232  


Q ss_pred             cccEEEeCCCh----------H-H---------------HHHhhccccCCCEEEEEeccCC
Q 020487          208 GVDVILDCMGA----------S-Y---------------FQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       208 ~~d~vi~~~g~----------~-~---------------~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                      .+|.+|.+.|.          . .               ...+.+.+++.|+++.++....
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  144 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG  144 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence            68999999873          0 0               1233445567789998876553

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.71  E-value=0.0095  Score=50.77  Aligned_cols=80  Identities=21%  Similarity=0.321  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-c--CCC-EEE--eCCCchHHHHHHHH-hCCCcccE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L--GAD-VCI--NYKTEDFVARVKEE-TGGKGVDV  211 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~--g~~-~~~--~~~~~~~~~~~~~~-~~~~~~d~  211 (325)
                      ++.+++|+|++|.+|..++..+...|++|+++++++++.+.+.+ +  +.. ..+  |..+......+.+. .....+|.
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            46789999999999999999999999999999999877655542 2  211 122  22232222222221 11236899


Q ss_pred             EEeCCCh
Q 020487          212 ILDCMGA  218 (325)
Q Consensus       212 vi~~~g~  218 (325)
                      ++.+.|.
T Consensus        84 lv~~ag~   90 (263)
T PRK09072         84 LINNAGV   90 (263)
T ss_pred             EEECCCC
Confidence            9999874

>PRK06181 short chain dehydrogenase; Provisional

Probab=96.71  E-value=0.011  Score=50.39  Aligned_cols=78  Identities=19%  Similarity=0.354  Sum_probs=50.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCch-HHHHHHHHhC-CCcccE
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-FVARVKEETG-GKGVDV  211 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~~~~~~~~~-~~~~d~  211 (325)
                      .++||+|++|.+|..+++.+...|++|++++++..+.+.+.    ..+... ++  |..+.. ....+.+... ..++|.
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999876654332    233322 22  222222 1111221110 125899


Q ss_pred             EEeCCCh
Q 020487          212 ILDCMGA  218 (325)
Q Consensus       212 vi~~~g~  218 (325)
                      ++.|.|.
T Consensus        82 vi~~ag~   88 (263)
T PRK06181         82 LVNNAGI   88 (263)
T ss_pred             EEECCCc
Confidence            9999864

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.71  E-value=0.0088  Score=51.00  Aligned_cols=78  Identities=31%  Similarity=0.433  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----Hc-CCCE--E--EeCCCchHHHH----HHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DL-GADV--C--INYKTEDFVAR----VKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~-g~~~--~--~~~~~~~~~~~----~~~~~~  205 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++.++.++.+...    +. +...  .  .|-.+......    +.+..+
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999999999999887665432    11 1112  1  23333222222    222233


Q ss_pred             CCcccEEEeCCCh
Q 020487          206 GKGVDVILDCMGA  218 (325)
Q Consensus       206 ~~~~d~vi~~~g~  218 (325)
                        .+|++++++|.
T Consensus        87 --~id~li~~Ag~   97 (265)
T PRK07062         87 --GVDMLVNNAGQ   97 (265)
T ss_pred             --CCCEEEECCCC
Confidence              68999999873

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.71  E-value=0.018  Score=49.00  Aligned_cols=77  Identities=22%  Similarity=0.259  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecChhhH---HHH-HHcCCCEEEeCC--Cch----HHHHHHHHhCC
Q 020487          139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKL---AVC-KDLGADVCINYK--TED----FVARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~~~~---~~~-~~~g~~~~~~~~--~~~----~~~~~~~~~~~  206 (325)
                      .+.+++|+|++  +++|.++++.+...|++|+++.++++..   +.+ ++++....+..+  +..    +.+.+.+..+ 
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-   87 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG-   87 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC-
Confidence            47899999997  4899999999999999999998875432   222 233432333222  222    2222223333 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       .+|+++++.|
T Consensus        88 -~ld~lv~nAg   97 (258)
T PRK07533         88 -RLDFLLHSIA   97 (258)
T ss_pred             -CCCEEEEcCc
Confidence             6899999886

>PRK05876 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.013  Score=50.43  Aligned_cols=77  Identities=26%  Similarity=0.351  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.+++|+|+++.+|.+++..+...|++|+++.++.++.+...    ..+... .+  |-.+...    .+.+.+..+  
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--   82 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG--   82 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC--
Confidence            4678999999999999999999999999999998876655432    233322 22  2222221    122222232  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      .+|++|++.|
T Consensus        83 ~id~li~nAg   92 (275)
T PRK05876         83 HVDVVFSNAG   92 (275)
T ss_pred             CCCEEEECCC
Confidence            5899999987

>PRK06484 short chain dehydrogenase; Validated

Probab=96.70  E-value=0.0097  Score=56.19  Aligned_cols=78  Identities=27%  Similarity=0.388  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE---EEeCCCchHH----HHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV---CINYKTEDFV----ARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~---~~~~~~~~~~----~~~~~~~~~~~~d  210 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++.++.++.+.+. +++...   ..|..+....    +.+.+..+  ++|
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~iD   81 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFG--RID   81 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhC--CCC
Confidence            5789999999999999999999999999999999888765543 455432   2233332222    22222233  689


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      +++++.|.
T Consensus        82 ~li~nag~   89 (520)
T PRK06484         82 VLVNNAGV   89 (520)
T ss_pred             EEEECCCc
Confidence            99999763

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.017  Score=48.84  Aligned_cols=76  Identities=22%  Similarity=0.430  Sum_probs=51.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHH----HHHHHhCCCc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVA----RVKEETGGKG  208 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~----~~~~~~~~~~  208 (325)
                      +.+++|+|+++.+|..+++.+...|++|++++++.++.+.+.    +.+.. ..+  |-.+.....    .+.+..+  .
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFG--R   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC--C
Confidence            468999999999999999999999999999998877655443    22222 223  322322222    2222223  5


Q ss_pred             ccEEEeCCC
Q 020487          209 VDVILDCMG  217 (325)
Q Consensus       209 ~d~vi~~~g  217 (325)
                      +|+++++.|
T Consensus        79 id~lI~~ag   87 (252)
T PRK07677         79 IDALINNAA   87 (252)
T ss_pred             ccEEEECCC
Confidence            899999886

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=96.69  E-value=0.013  Score=49.66  Aligned_cols=76  Identities=21%  Similarity=0.447  Sum_probs=51.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEE--eCCCchHHH----HHHHHhCCCcccE
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDFVA----RVKEETGGKGVDV  211 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~~~----~~~~~~~~~~~d~  211 (325)
                      +.+++|+|++|.+|..+++.+...|++|++++++.++.+.+. +++.. ..+  |-.+.....    .+.+..+  .+|+
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id~   83 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFG--GIDI   83 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC--CCCE
Confidence            678999999999999999999999999999999888765544 33322 122  222222222    2222222  6899


Q ss_pred             EEeCCC
Q 020487          212 ILDCMG  217 (325)
Q Consensus       212 vi~~~g  217 (325)
                      ++.+.|
T Consensus        84 li~~ag   89 (257)
T PRK07067         84 LFNNAA   89 (257)
T ss_pred             EEECCC
Confidence            999876

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.69  E-value=0.013  Score=48.90  Aligned_cols=78  Identities=19%  Similarity=0.315  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHH----HHHcCCCEE-EeCCCchHH----HHHHHHhCCCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV----CKDLGADVC-INYKTEDFV----ARVKEETGGKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~----~~~~g~~~~-~~~~~~~~~----~~~~~~~~~~~~  209 (325)
                      ++.++||+|++|.+|..+++.+...|++|++++++.++...    ....+...+ .|-.+....    +.+.+..+  ++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~~   83 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFG--RL   83 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhC--Cc
Confidence            37899999999999999999998889999999987765432    222333221 222222211    22222233  68


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |+++.+.|.
T Consensus        84 d~vi~~ag~   92 (239)
T PRK12828         84 DALVNIAGA   92 (239)
T ss_pred             CEEEECCcc
Confidence            999998763

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=96.69  E-value=0.015  Score=49.46  Aligned_cols=78  Identities=31%  Similarity=0.441  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHH----HHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFV----ARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~----~~~~~~~~~~  207 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++.+...    ..+.. ..+  |..+....    ..+.+..  .
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~--~   88 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF--G   88 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh--C
Confidence            4789999999999999999999999999999999887655443    22322 122  33332222    2222222  2


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|.++.+.|.
T Consensus        89 ~id~vi~~ag~   99 (259)
T PRK08213         89 HVDILVNNAGA   99 (259)
T ss_pred             CCCEEEECCCC
Confidence            68999999873

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=96.69  E-value=0.013  Score=49.67  Aligned_cols=80  Identities=23%  Similarity=0.291  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHHHHHHHh--CCCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVARVKEET--GGKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~~~~~~~--~~~~~  209 (325)
                      .+.++||+|++|.+|..+++.+...|++|+++.+++++.+...    +.|.. ..+  |..+......+.+..  ....+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4789999999999999999999889999999998877654332    22322 122  333322222222211  11268


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |++|.+.|.
T Consensus        89 d~li~~ag~   97 (255)
T PRK07523         89 DILVNNAGM   97 (255)
T ss_pred             CEEEECCCC
Confidence            999999874

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.68  E-value=0.006  Score=44.46  Aligned_cols=91  Identities=24%  Similarity=0.316  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHH-HCCCEEEEEecChhhHHHHHHc----CC-CE--EEeCCCchHHHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDL----GA-DV--CINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~-~~g~~v~~~~~~~~~~~~~~~~----g~-~~--~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      |+.+||-+|+  +.|..+..+++ ..+++|++++.+++..+.+++.    +. +.  ++..+. .     .......+||
T Consensus         1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~-~-----~~~~~~~~~D   72 (112)
T PF12847_consen    1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDA-E-----FDPDFLEPFD   72 (112)
T ss_dssp             TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCC-H-----GGTTTSSCEE
T ss_pred             CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECcc-c-----cCcccCCCCC
Confidence            6889999997  45888888888 4689999999999988776632    21 22  222222 1     1112233699


Q ss_pred             EEEeCC-Ch----HH------HHHhhccccCCCEEEEE
Q 020487          211 VILDCM-GA----SY------FQRNLGSLNIDGRLFII  237 (325)
Q Consensus       211 ~vi~~~-g~----~~------~~~~~~~l~~~g~~v~~  237 (325)
                      +|+... ..    ..      +..+.+.|+|||+++.-
T Consensus        73 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   73 LVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             EEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence            999877 22    12      56778899999999863

...

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=96.67  E-value=0.013  Score=49.41  Aligned_cols=77  Identities=23%  Similarity=0.369  Sum_probs=50.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCE-EE--eCCCchHHHHHHH-HhC-CCcccEEEeC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV-CI--NYKTEDFVARVKE-ETG-GKGVDVILDC  215 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~-~~--~~~~~~~~~~~~~-~~~-~~~~d~vi~~  215 (325)
                      +++|+|++|.+|..++..+...|++|+++++++++.+.+.. ++... .+  |-.+......+.+ ... ..++|.++.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            68999999999999999999999999999999887665543 34321 22  2222221222211 111 1268999998


Q ss_pred             CCh
Q 020487          216 MGA  218 (325)
Q Consensus       216 ~g~  218 (325)
                      .|.
T Consensus        82 ag~   84 (248)
T PRK10538         82 AGL   84 (248)
T ss_pred             CCc
Confidence            763

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.67  E-value=0.016  Score=52.56  Aligned_cols=76  Identities=18%  Similarity=0.274  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      .+.+++|+|++|.+|.+++..+...|++|+++++++++.+... ..... ..+..+..+ .+.+.+..+  ++|++|.+.
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd-~~~v~~~l~--~IDiLInnA  253 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQ-EAALAELLE--KVDILIINH  253 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC-HHHHHHHhC--CCCEEEECC
Confidence            3679999999999999999999889999999998876554322 11111 122222222 223444443  689999987


Q ss_pred             C
Q 020487          217 G  217 (325)
Q Consensus       217 g  217 (325)
                      |
T Consensus       254 G  254 (406)
T PRK07424        254 G  254 (406)
T ss_pred             C
Confidence            6

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.67  E-value=0.019  Score=48.97  Aligned_cols=77  Identities=23%  Similarity=0.322  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCEEE--eCCCchHH----HHHHHHhCC
Q 020487          139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTEDFV----ARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g--~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~~~----~~~~~~~~~  206 (325)
                      .+..++|+|+++  ++|.++++.+...|++|++..+++...+.++    +.+....+  |-.+....    +.+.+..+ 
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g-   85 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG-   85 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC-
Confidence            478899999976  7999999988889999999887643222222    23433322  33332222    22222333 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       .+|+++++.|
T Consensus        86 -~iDilVnnag   95 (260)
T PRK06603         86 -SFDFLLHGMA   95 (260)
T ss_pred             -CccEEEEccc
Confidence             6899999876

>PRK08862 short chain dehydrogenase; Provisional

Probab=96.67  E-value=0.01  Score=49.55  Aligned_cols=78  Identities=12%  Similarity=0.135  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.+++|+|+++++|.+++..+...|++|+++.++.++.+.+.    +.+.+. .+  |..+...    .+.+.+..+ .
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~   82 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN-R   82 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC-C
Confidence            4678999999999999999999999999999999888765432    334332 22  3222222    222223333 2


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      .+|+++++.|
T Consensus        83 ~iD~li~nag   92 (227)
T PRK08862         83 APDVLVNNWT   92 (227)
T ss_pred             CCCEEEECCc
Confidence            5899999986

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.66  E-value=0.02  Score=48.78  Aligned_cols=78  Identities=17%  Similarity=0.250  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCCEEE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~--~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .+.+++|+|+  ++++|.++++.+...|++|++..+.+...+.+++    .+....+  |-.+...    .+.+.+..+ 
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-   83 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD-   83 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC-
Confidence            4678999996  5799999999999999999998765433333322    2332233  3222222    222333333 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       ++|+++++.|.
T Consensus        84 -~iD~lVnnAG~   94 (261)
T PRK08690         84 -GLDGLVHSIGF   94 (261)
T ss_pred             -CCcEEEECCcc
Confidence             69999999863

>PRK06138 short chain dehydrogenase; Provisional

Probab=96.66  E-value=0.013  Score=49.35  Aligned_cols=77  Identities=23%  Similarity=0.340  Sum_probs=51.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc--CCC-EEE--eCCCchHHHH----HHHHhCCCcc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--GAD-VCI--NYKTEDFVAR----VKEETGGKGV  209 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~--g~~-~~~--~~~~~~~~~~----~~~~~~~~~~  209 (325)
                      +.+++|+|++|.+|..+++.+...|++|+++.++.++..... ++  +.. ..+  |-.+......    +.+..  .++
T Consensus         5 ~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~--~~i   82 (252)
T PRK06138          5 GRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARW--GRL   82 (252)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc--CCC
Confidence            678999999999999999988888999999998877654433 22  322 222  2222222222    22222  268


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |+++.|.|.
T Consensus        83 d~vi~~ag~   91 (252)
T PRK06138         83 DVLVNNAGF   91 (252)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=96.65  E-value=0.021  Score=48.48  Aligned_cols=75  Identities=25%  Similarity=0.348  Sum_probs=50.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCEEE--eCCCchHHH----HHHHHhCCCcccE
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTEDFVA----RVKEETGGKGVDV  211 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~~~~----~~~~~~~~~~~d~  211 (325)
                      +++|+|+++.+|.++++.+...|++|+++.+++++.+...    +.+....+  |-.+.....    .+.+..+  ++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g--~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLG--GIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcC--CCCE
Confidence            6899999999999999999999999999999887654432    22322233  222222222    2222223  6899


Q ss_pred             EEeCCCh
Q 020487          212 ILDCMGA  218 (325)
Q Consensus       212 vi~~~g~  218 (325)
                      ++++.|.
T Consensus        80 li~naG~   86 (259)
T PRK08340         80 LVWNAGN   86 (259)
T ss_pred             EEECCCC
Confidence            9998873

>PRK08303 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.021  Score=49.89  Aligned_cols=35  Identities=31%  Similarity=0.362  Sum_probs=32.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      .+.+++|+|+++++|.++++.+...|++|+++.++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            47899999999999999999999999999999886

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=96.64  E-value=0.0096  Score=50.96  Aligned_cols=80  Identities=31%  Similarity=0.407  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC----EE--EeCCCchHHHHHHHH-hC--
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD----VC--INYKTEDFVARVKEE-TG--  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~----~~--~~~~~~~~~~~~~~~-~~--  205 (325)
                      .|..++|+|+++++|.+++..+...|++|+++.+++++.+....    .+..    ..  .|-........+.+. ..  
T Consensus         7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~   86 (270)
T KOG0725|consen    7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKF   86 (270)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHh
Confidence            57889999999999999999999999999999999998755442    2221    11  222222222222221 11  


Q ss_pred             CCcccEEEeCCCh
Q 020487          206 GKGVDVILDCMGA  218 (325)
Q Consensus       206 ~~~~d~vi~~~g~  218 (325)
                      ..++|+++++.|.
T Consensus        87 ~GkidiLvnnag~   99 (270)
T KOG0725|consen   87 FGKIDILVNNAGA   99 (270)
T ss_pred             CCCCCEEEEcCCc
Confidence            1269999998874

>PRK06114 short chain dehydrogenase; Provisional

Probab=96.63  E-value=0.015  Score=49.21  Aligned_cols=78  Identities=24%  Similarity=0.316  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh-HH----HHHHcCCCE-EE--eCCCch-H---HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LA----VCKDLGADV-CI--NYKTED-F---VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~-~~----~~~~~g~~~-~~--~~~~~~-~---~~~~~~~~~~  206 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++.++.++ .+    .++..+... .+  |-.+.. .   .+.+.+..+ 
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g-   85 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG-   85 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence            46799999999999999999999999999999876532 22    222334321 22  222222 1   122222232 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       .+|+++.|.|.
T Consensus        86 -~id~li~~ag~   96 (254)
T PRK06114         86 -ALTLAVNAAGI   96 (254)
T ss_pred             -CCCEEEECCCC
Confidence             68999999874

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.63  E-value=0.023  Score=48.84  Aligned_cols=101  Identities=19%  Similarity=0.231  Sum_probs=64.5

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecChh---hHHHH-HHcCCCEEE--eCCCchHHH----HHHHHhCC
Q 020487          139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVC-KDLGADVCI--NYKTEDFVA----RVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~~---~~~~~-~~~g~~~~~--~~~~~~~~~----~~~~~~~~  206 (325)
                      .+.+++|+|++  +++|.++++.+...|++|+++.++++   +.+.+ ++++....+  |-.+....+    .+.+..+ 
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g-   82 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG-   82 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC-
Confidence            36899999996  69999999999999999999988753   22222 334433333  333322222    2222233 


Q ss_pred             CcccEEEeCCChH---------------H---------------HHHhhccccCCCEEEEEeccC
Q 020487          207 KGVDVILDCMGAS---------------Y---------------FQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       207 ~~~d~vi~~~g~~---------------~---------------~~~~~~~l~~~g~~v~~g~~~  241 (325)
                       .+|+++++.|..               .               ....+..|..+|+++.++...
T Consensus        83 -~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~  146 (274)
T PRK08415         83 -KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG  146 (274)
T ss_pred             -CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence             689999998731               0               123445666789999886644

>PRK08589 short chain dehydrogenase; Validated

Probab=96.63  E-value=0.013  Score=50.26  Aligned_cols=78  Identities=22%  Similarity=0.331  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH---cCCC-EE--EeCCCchH----HHHHHHHhCCCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD---LGAD-VC--INYKTEDF----VARVKEETGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~---~g~~-~~--~~~~~~~~----~~~~~~~~~~~~  208 (325)
                      .+.++||+|+++.+|.++++.+...|++|+++.++++..+..++   .+.. ..  .|-.+...    .+.+.+..+  .
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g--~   82 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG--R   82 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC--C
Confidence            47799999999999999999999999999999988332222222   2322 12  23333222    222323333  5


Q ss_pred             ccEEEeCCCh
Q 020487          209 VDVILDCMGA  218 (325)
Q Consensus       209 ~d~vi~~~g~  218 (325)
                      +|+++++.|.
T Consensus        83 id~li~~Ag~   92 (272)
T PRK08589         83 VDVLFNNAGV   92 (272)
T ss_pred             cCEEEECCCC
Confidence            8999998863

>PRK07774 short chain dehydrogenase; Provisional

Probab=96.63  E-value=0.017  Score=48.68  Aligned_cols=77  Identities=18%  Similarity=0.264  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHH----HHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFV----ARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~----~~~~~~~~~~  207 (325)
                      .+.+++|+|++|.+|..+++.+...|++|+++.++++....+.    +.+.. ..+  |..+....    ..+.+..+  
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--   82 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG--   82 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC--
Confidence            3678999999999999999999889999999998876554332    22222 222  32222211    22222333  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|++|.+.|
T Consensus        83 ~id~vi~~ag   92 (250)
T PRK07774         83 GIDYLVNNAA   92 (250)
T ss_pred             CCCEEEECCC
Confidence            5899999987

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.62  E-value=0.014  Score=51.39  Aligned_cols=72  Identities=21%  Similarity=0.246  Sum_probs=51.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +|+|+||+|-+|..++..+...|.+|++++|+.++.......+...+ ..+-.+ ...+.+...  ++|+||.+++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v-~~Dl~d-~~~l~~al~--g~d~Vi~~~~   73 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELV-YGDLSL-PETLPPSFK--GVTAIIDAST   73 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEE-ECCCCC-HHHHHHHHC--CCCEEEECCC
Confidence            69999999999999999999999999999998766554444454332 222111 223444443  6899999875

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=96.62  E-value=0.012  Score=49.91  Aligned_cols=77  Identities=26%  Similarity=0.386  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH---HcCCCE-E--EeCCCchH----HHHHHHHhCCCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK---DLGADV-C--INYKTEDF----VARVKEETGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~---~~g~~~-~--~~~~~~~~----~~~~~~~~~~~~  208 (325)
                      .+.+++|+|++|.+|..+++.+...|++|+++.+++...+..+   ..+.+. .  .|..+...    .+.+.+..+  .
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~   84 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG--R   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC--C
Confidence            3678999999999999999999999999999998754332222   233332 1  23333221    222222222  6


Q ss_pred             ccEEEeCCC
Q 020487          209 VDVILDCMG  217 (325)
Q Consensus       209 ~d~vi~~~g  217 (325)
                      +|+++.++|
T Consensus        85 id~lv~nAg   93 (260)
T PRK12823         85 IDVLINNVG   93 (260)
T ss_pred             CeEEEECCc
Confidence            899999986

>PRK06101 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.014  Score=49.10  Aligned_cols=76  Identities=16%  Similarity=0.101  Sum_probs=49.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC-EE--EeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VC--INYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .+++|+|++|.+|..++..+...|++|+++++++++.+.+.+.+.. ..  .|-.+......+.+.... ..|.++.+.|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~d~~i~~ag   80 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPF-IPELWIFNAG   80 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhccc-CCCEEEEcCc
Confidence            4689999999999999998888999999999998877666543321 22  233333322333333222 3566666654

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.62  E-value=0.025  Score=48.41  Aligned_cols=95  Identities=14%  Similarity=0.169  Sum_probs=65.5

Q ss_pred             CcchHHHHHHHHHhhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHH
Q 020487          120 FPEVACTVWSTVFMTSHL-SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA  198 (325)
Q Consensus       120 l~~~~~~a~~~l~~~~~~-~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  198 (325)
                      +|+........+ +..++ -.|.+++|+|.+..+|..+++++...|++|++..+...                       
T Consensus       138 ~PcTp~ai~~ll-~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~-----------------------  193 (286)
T PRK14175        138 VPCTPLGIMEIL-KHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK-----------------------  193 (286)
T ss_pred             CCCcHHHHHHHH-HHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch-----------------------
Confidence            444333333334 33332 35899999999777999999999999999998874321                       


Q ss_pred             HHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487          199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      .+.+.+  +.+|++|.++|.+.+-. -++++++..++++|...
T Consensus       194 ~l~~~~--~~ADIVIsAvg~p~~i~-~~~vk~gavVIDvGi~~  233 (286)
T PRK14175        194 DMASYL--KDADVIVSAVGKPGLVT-KDVVKEGAVIIDVGNTP  233 (286)
T ss_pred             hHHHHH--hhCCEEEECCCCCcccC-HHHcCCCcEEEEcCCCc
Confidence            122222  25899999999875422 25688998999998754

>PRK06125 short chain dehydrogenase; Provisional

Probab=96.61  E-value=0.027  Score=47.83  Aligned_cols=78  Identities=23%  Similarity=0.443  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----Hc-CCC-EEE--eCCCchHHHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DL-GAD-VCI--NYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~-g~~-~~~--~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      .+.+++|+|+++.+|..+++.+...|++|++++++.++.+...    +. +.. ..+  |-.+......+.+..+  .+|
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g--~id   83 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAG--DID   83 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhC--CCC
Confidence            3689999999999999999999999999999999877655432    11 222 222  3233222333333333  689


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      +++.|.|.
T Consensus        84 ~lv~~ag~   91 (259)
T PRK06125         84 ILVNNAGA   91 (259)
T ss_pred             EEEECCCC
Confidence            99998873

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=96.61  E-value=0.013  Score=49.29  Aligned_cols=40  Identities=28%  Similarity=0.323  Sum_probs=34.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA  178 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~  178 (325)
                      .+.+++|+|++|.+|..++..+...|++|++++++.++..
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~   44 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAA   44 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            3678999999999999999999889999999999866543

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=96.61  E-value=0.017  Score=49.25  Aligned_cols=81  Identities=21%  Similarity=0.372  Sum_probs=61.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-----cCCC---EEEeCCCchH-HHHHHHHhCCCc
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LGAD---VCINYKTEDF-VARVKEETGGKG  208 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-----~g~~---~~~~~~~~~~-~~~~~~~~~~~~  208 (325)
                      +-|++.+|+|++.++|-+-+.=+.+.|.+|+.+.|+.++++.+++     .+..   .++|....+. .+.+.+.+.+-.
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~  126 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD  126 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence            346899999999999977666666689999999999999987652     2321   2456665553 566777777777


Q ss_pred             ccEEEeCCCh
Q 020487          209 VDVILDCMGA  218 (325)
Q Consensus       209 ~d~vi~~~g~  218 (325)
                      +-+.++|+|.
T Consensus       127 VgILVNNvG~  136 (312)
T KOG1014|consen  127 VGILVNNVGM  136 (312)
T ss_pred             eEEEEecccc
Confidence            8889999985

>PRK07035 short chain dehydrogenase; Provisional

Probab=96.60  E-value=0.017  Score=48.84  Aligned_cols=76  Identities=22%  Similarity=0.383  Sum_probs=51.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHH----HHHHHHhCCCc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFV----ARVKEETGGKG  208 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~----~~~~~~~~~~~  208 (325)
                      +.+++|+|+++.+|..+++.+...|++|+++.++.++.+.+.    +.+.. ..+  |..+....    +.+.+..+  .
T Consensus         8 ~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~   85 (252)
T PRK07035          8 GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG--R   85 (252)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC--C
Confidence            578999999999999999999999999999998877654433    22322 222  22222211    22222333  5


Q ss_pred             ccEEEeCCC
Q 020487          209 VDVILDCMG  217 (325)
Q Consensus       209 ~d~vi~~~g  217 (325)
                      +|+++.+.|
T Consensus        86 id~li~~ag   94 (252)
T PRK07035         86 LDILVNNAA   94 (252)
T ss_pred             CCEEEECCC
Confidence            899998887

>PRK06482 short chain dehydrogenase; Provisional

Probab=96.60  E-value=0.017  Score=49.57  Aligned_cols=78  Identities=23%  Similarity=0.275  Sum_probs=51.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCC-EE--EeCCCchHH-HHHHHHh-CCCcccEEEe
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD-VC--INYKTEDFV-ARVKEET-GGKGVDVILD  214 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~-~~--~~~~~~~~~-~~~~~~~-~~~~~d~vi~  214 (325)
                      .++||+|++|.+|..+++.+...|++|+++.++.++.+.+++ .+.. ..  .|..+.... ..+.+.. ...++|++|.
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            479999999999999999998899999999999887766553 2222 12  232322211 2222211 1136899999


Q ss_pred             CCCh
Q 020487          215 CMGA  218 (325)
Q Consensus       215 ~~g~  218 (325)
                      +.|.
T Consensus        83 ~ag~   86 (276)
T PRK06482         83 NAGY   86 (276)
T ss_pred             CCCC
Confidence            9863

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.60  E-value=0.02  Score=48.56  Aligned_cols=78  Identities=21%  Similarity=0.210  Sum_probs=50.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCC--C-EEE--eCCCchHHHHH-HHHhC-CCcccE
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGA--D-VCI--NYKTEDFVARV-KEETG-GKGVDV  211 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~--~-~~~--~~~~~~~~~~~-~~~~~-~~~~d~  211 (325)
                      +.+++|+|++|.+|..++..+...|++|++++++.++.+...+ +..  . ..+  |..+....... .+... ...+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            4689999999999999999999999999999998877655432 221  1 122  33332222222 11111 125799


Q ss_pred             EEeCCC
Q 020487          212 ILDCMG  217 (325)
Q Consensus       212 vi~~~g  217 (325)
                      ++.+.|
T Consensus        82 lv~~ag   87 (257)
T PRK07024         82 VIANAG   87 (257)
T ss_pred             EEECCC
Confidence            999886

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.58  E-value=0.025  Score=47.18  Aligned_cols=80  Identities=25%  Similarity=0.374  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcC---CCEEE--eCCCch-HHHHHHHHhC-CCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG---ADVCI--NYKTED-FVARVKEETG-GKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g---~~~~~--~~~~~~-~~~~~~~~~~-~~~~d  210 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++...+. ++.   .-+.+  |..+.. ....+.+... ..++|
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD   84 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4688999999999999999999888999999999887665443 332   11222  322222 2222222211 12689


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      ++|.+.|.
T Consensus        85 ~vi~~ag~   92 (237)
T PRK07326         85 VLIANAGV   92 (237)
T ss_pred             EEEECCCC
Confidence            99998763

>PRK07454 short chain dehydrogenase; Provisional

Probab=96.58  E-value=0.024  Score=47.51  Aligned_cols=79  Identities=23%  Similarity=0.304  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchH----HHHHHHHhCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      ..+.+++|+|++|.+|..++..+...|++|++++++.++.+.+.    +.+.. ..+  |-.+...    .+.+.+..+ 
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   82 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG-   82 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC-
Confidence            34578999999999999999999999999999999887655443    22322 122  2222221    122222223 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       .+|+++.+.|.
T Consensus        83 -~id~lv~~ag~   93 (241)
T PRK07454         83 -CPDVLINNAGM   93 (241)
T ss_pred             -CCCEEEECCCc
Confidence             58999999873

>PRK08643 acetoin reductase; Validated

Probab=96.56  E-value=0.018  Score=48.82  Aligned_cols=77  Identities=22%  Similarity=0.328  Sum_probs=51.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchH----HHHHHHHhCCCc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF----VARVKEETGGKG  208 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~----~~~~~~~~~~~~  208 (325)
                      +.+++|+|++|.+|..+++.+...|++|++++++.++.+.+.    ..+... .+  |-.+...    ...+.+..+  +
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFG--D   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC--C
Confidence            568999999999999999999999999999998877654432    223221 22  2222221    122222233  6


Q ss_pred             ccEEEeCCCh
Q 020487          209 VDVILDCMGA  218 (325)
Q Consensus       209 ~d~vi~~~g~  218 (325)
                      +|++|.|.|.
T Consensus        80 id~vi~~ag~   89 (256)
T PRK08643         80 LNVVVNNAGV   89 (256)
T ss_pred             CCEEEECCCC
Confidence            8999999863

>PRK08264 short chain dehydrogenase; Validated

Probab=96.56  E-value=0.022  Score=47.62  Aligned_cols=75  Identities=25%  Similarity=0.416  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCC-EEE--eCCCchHHHHHHHHhCCCcccEEEe
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGAD-VCI--NYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~-~~~--~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      .+.+++|+|++|.+|..+++.+...|+ +|+++.++.++.+.   .+.. ..+  |..+......+.+..  ..+|++|.
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~   79 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILVN   79 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEEE
Confidence            467899999999999999999999999 99999988766543   2222 222  333323233333333  25899999


Q ss_pred             CCCh
Q 020487          215 CMGA  218 (325)
Q Consensus       215 ~~g~  218 (325)
                      +.|.
T Consensus        80 ~ag~   83 (238)
T PRK08264         80 NAGI   83 (238)
T ss_pred             CCCc
Confidence            8876

>PRK08226 short chain dehydrogenase; Provisional

Probab=96.56  E-value=0.018  Score=49.02  Aligned_cols=77  Identities=22%  Similarity=0.357  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH---cCCC-EEE--eCCCchHHH----HHHHHhCCCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD---LGAD-VCI--NYKTEDFVA----RVKEETGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~---~g~~-~~~--~~~~~~~~~----~~~~~~~~~~  208 (325)
                      .+.+++|+|++|.+|..+++.+...|++|+++.++.+..+..++   .+.. ..+  |..+.....    .+.+..  ..
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~   82 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE--GR   82 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc--CC
Confidence            46889999999999999999999999999999988754333322   2322 122  222222222    222222  25


Q ss_pred             ccEEEeCCC
Q 020487          209 VDVILDCMG  217 (325)
Q Consensus       209 ~d~vi~~~g  217 (325)
                      +|++|.+.|
T Consensus        83 id~vi~~ag   91 (263)
T PRK08226         83 IDILVNNAG   91 (263)
T ss_pred             CCEEEECCC
Confidence            899999887

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=96.56  E-value=0.018  Score=48.69  Aligned_cols=78  Identities=18%  Similarity=0.336  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHH----HHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVA----RVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~----~~~~~~~~~  207 (325)
                      .+.++||+|+++.+|..+++.+...|++|+++.++.++.+...    ..+.. ..+  |-.+.....    .+.+..  .
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~   85 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI--G   85 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc--C
Confidence            4678999999999999999999999999999998877654332    22322 122  222222222    222222  2


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|+++.+.|.
T Consensus        86 ~id~vi~~ag~   96 (254)
T PRK08085         86 PIDVLINNAGI   96 (254)
T ss_pred             CCCEEEECCCc
Confidence            68999999873

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.56  E-value=0.015  Score=50.78  Aligned_cols=104  Identities=22%  Similarity=0.287  Sum_probs=66.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc----CCCEE----EeCCCchHHHHHHHH--hCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----GADVC----INYKTEDFVARVKEE--TGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~----g~~~~----~~~~~~~~~~~~~~~--~~~~  207 (325)
                      .+.+++|+|+++++|..++..+...|++|+..+|+.++.+.+. ++    ....+    +|-..........+.  ....
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~  113 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG  113 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence            4678999999999999999999999999999999987665543 22    22222    233332222222221  1234


Q ss_pred             cccEEEeCCChH-----------------------H-HHHhhccccCC--CEEEEEeccCC
Q 020487          208 GVDVILDCMGAS-----------------------Y-FQRNLGSLNID--GRLFIIGTQGG  242 (325)
Q Consensus       208 ~~d~vi~~~g~~-----------------------~-~~~~~~~l~~~--g~~v~~g~~~~  242 (325)
                      +.|+.|+++|.-                       . ...++..|+..  +|+|.+.+..+
T Consensus       114 ~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~  174 (314)
T KOG1208|consen  114 PLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG  174 (314)
T ss_pred             CccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence            789999988741                       0 23444555443  89998876443

>PRK06197 short chain dehydrogenase; Provisional

Probab=96.56  E-value=0.016  Score=50.59  Aligned_cols=41  Identities=20%  Similarity=0.297  Sum_probs=36.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV  179 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~  179 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++.+.
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~   55 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKA   55 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            46899999999999999999998899999999998776543

>PRK05717 oxidoreductase; Validated

Probab=96.55  E-value=0.02  Score=48.53  Aligned_cols=78  Identities=26%  Similarity=0.280  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH-HHcCCC-EEE--eCCCchHH----HHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGAD-VCI--NYKTEDFV----ARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~~--~~~~~~~~----~~~~~~~~~~~~d  210 (325)
                      .|.+++|+|++|.+|..++..+...|++|+++.++..+.+.. ++++.. ..+  |-.+....    +.+.+..+  .+|
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g--~id   86 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFG--RLD   86 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhC--CCC
Confidence            367899999999999999999999999999998776654433 344432 222  22232221    22222222  589


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      ++|.+.|.
T Consensus        87 ~li~~ag~   94 (255)
T PRK05717         87 ALVCNAAI   94 (255)
T ss_pred             EEEECCCc
Confidence            99998873

>PRK09186 flagellin modification protein A; Provisional

Probab=96.54  E-value=0.022  Score=48.17  Aligned_cols=42  Identities=21%  Similarity=0.233  Sum_probs=36.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC  180 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (325)
                      .+.+++|+|++|.+|..++..+...|++|+++.++.++.+.+
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   44 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNEL   44 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHH
Confidence            468899999999999999999999999999999887766543

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.53  E-value=0.018  Score=48.92  Aligned_cols=77  Identities=19%  Similarity=0.347  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCC-EEE--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGAD-VCI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~-~~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.++||+|+++.+|..+++.+...|++|+++.++ ++.+.+    .+.+.. ..+  |-.+...    .+.+.+..+  
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g--   90 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFG--   90 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC--
Confidence            47899999999999999999999999999999887 332222    233432 222  3222222    222222232  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      .+|+++.+.|.
T Consensus        91 ~id~li~~ag~  101 (258)
T PRK06935         91 KIDILVNNAGT  101 (258)
T ss_pred             CCCEEEECCCC
Confidence            58999998873

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=96.52  E-value=0.021  Score=48.41  Aligned_cols=78  Identities=19%  Similarity=0.276  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh--HHHHHHcCCC-EEE--eCCCchH----HHHHHHHhCCCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGAD-VCI--NYKTEDF----VARVKEETGGKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~--~~~~~~~g~~-~~~--~~~~~~~----~~~~~~~~~~~~~  209 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+.+.+....  .+.+++.+.. ..+  |-.+...    .+.+.+..+  .+
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--~~   86 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFG--HI   86 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC--CC
Confidence            36799999999999999999999999999987654322  2333344432 122  2222221    222222333  68


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |++++|.|.
T Consensus        87 D~li~~Ag~   95 (253)
T PRK08993         87 DILVNNAGL   95 (253)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK09242 tropinone reductase; Provisional

Probab=96.52  E-value=0.021  Score=48.47  Aligned_cols=78  Identities=21%  Similarity=0.352  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H---c--CCCE-EE--eCCCchHH----HHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---L--GADV-CI--NYKTEDFV----ARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~--g~~~-~~--~~~~~~~~----~~~~~~~~  205 (325)
                      .+.+++|+|+++.+|..+++.+...|++|++++++.++.+... +   .  +.+. .+  |..+....    +.+.+..+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999887665443 2   1  2221 12  32222222    22223333


Q ss_pred             CCcccEEEeCCCh
Q 020487          206 GKGVDVILDCMGA  218 (325)
Q Consensus       206 ~~~~d~vi~~~g~  218 (325)
                        ++|+++.+.|.
T Consensus        88 --~id~li~~ag~   98 (257)
T PRK09242         88 --GLHILVNNAGG   98 (257)
T ss_pred             --CCCEEEECCCC
Confidence              68999999974

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.52  E-value=0.01  Score=50.44  Aligned_cols=78  Identities=22%  Similarity=0.415  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHH----HHHHcCCC--EEEeCCCch----HHHHHHHHhCCCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA----VCKDLGAD--VCINYKTED----FVARVKEETGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~----~~~~~g~~--~~~~~~~~~----~~~~~~~~~~~~~  208 (325)
                      .|+.|||+|+++++|.+.++=..+.|+++++.+.+.+...    ++++.|-.  +..|-....    ..+.+++..|  .
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G--~  114 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG--D  114 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC--C
Confidence            5899999999999999988888888999988887776443    33344421  333433322    3455555555  6


Q ss_pred             ccEEEeCCCh
Q 020487          209 VDVILDCMGA  218 (325)
Q Consensus       209 ~d~vi~~~g~  218 (325)
                      +|++++++|.
T Consensus       115 V~ILVNNAGI  124 (300)
T KOG1201|consen  115 VDILVNNAGI  124 (300)
T ss_pred             ceEEEecccc
Confidence            9999999885

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.51  E-value=0.027  Score=48.35  Aligned_cols=78  Identities=18%  Similarity=0.263  Sum_probs=49.9

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecChh---hHHHH-HHcCCCEEE--eCCCchHH----HHHHHHhC
Q 020487          138 SPGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVC-KDLGADVCI--NYKTEDFV----ARVKEETG  205 (325)
Q Consensus       138 ~~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~~---~~~~~-~~~g~~~~~--~~~~~~~~----~~~~~~~~  205 (325)
                      -.+.+++|+|++  +++|.++++.+...|++|+++.+++.   +.+.+ ++++....+  |-.+....    +.+.+..+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   87 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG   87 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence            357899999996  79999999999999999998877642   22222 234532223  32222222    22222232


Q ss_pred             CCcccEEEeCCC
Q 020487          206 GKGVDVILDCMG  217 (325)
Q Consensus       206 ~~~~d~vi~~~g  217 (325)
                        .+|+++++.|
T Consensus        88 --~iD~lv~nAG   97 (272)
T PRK08159         88 --KLDFVVHAIG   97 (272)
T ss_pred             --CCcEEEECCc
Confidence              6899999986

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.50  E-value=0.022  Score=48.95  Aligned_cols=77  Identities=22%  Similarity=0.335  Sum_probs=51.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCC-EEE--eCCCchHH----HHHHHHhCCCcccE
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD-VCI--NYKTEDFV----ARVKEETGGKGVDV  211 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~-~~~--~~~~~~~~----~~~~~~~~~~~~d~  211 (325)
                      +.+++|+|++|.+|..+++.+...|++|++++++.++.+.+.+ ++.. ..+  |..+....    ..+.+..+  ++|.
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~~d~   80 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFG--RLDI   80 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcC--CCCE
Confidence            4689999999999999999998889999999998887665543 2221 222  22222111    12222222  6899


Q ss_pred             EEeCCCh
Q 020487          212 ILDCMGA  218 (325)
Q Consensus       212 vi~~~g~  218 (325)
                      ++.|.|.
T Consensus        81 vi~~ag~   87 (275)
T PRK08263         81 VVNNAGY   87 (275)
T ss_pred             EEECCCC
Confidence            9999874

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=96.50  E-value=0.021  Score=49.10  Aligned_cols=77  Identities=17%  Similarity=0.349  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHH----HHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVA----RVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~----~~~~~~~~~  207 (325)
                      .+.+++|+|+++.+|.+++..+...|++|+++.++.++.+.+.    ..+.. ..+  |..+.....    .+.+..+  
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g--   86 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG--   86 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC--
Confidence            4688999999999999999999999999999998876554332    22322 122  222222222    2222222  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|++|.+.|
T Consensus        87 ~id~li~~ag   96 (278)
T PRK08277         87 PCDILINGAG   96 (278)
T ss_pred             CCCEEEECCC
Confidence            6899999987

>PRK07856 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.017  Score=48.80  Aligned_cols=73  Identities=26%  Similarity=0.360  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC-EEE--eCCCchHH----HHHHHHhCCCcccE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCI--NYKTEDFV----ARVKEETGGKGVDV  211 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~--~~~~~~~~----~~~~~~~~~~~~d~  211 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++    ...+.. ..+  |..+....    +.+.+..+  .+|+
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id~   78 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVERHG--RLDV   78 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcC--CCCE
Confidence            47899999999999999999999999999999987654    112211 122  32222212    22222223  6899


Q ss_pred             EEeCCC
Q 020487          212 ILDCMG  217 (325)
Q Consensus       212 vi~~~g  217 (325)
                      +|.+.|
T Consensus        79 vi~~ag   84 (252)
T PRK07856         79 LVNNAG   84 (252)
T ss_pred             EEECCC
Confidence            999887

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.49  E-value=0.03  Score=46.76  Aligned_cols=77  Identities=19%  Similarity=0.241  Sum_probs=50.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH-HHHHHcCCCEE-EeCCCchH----HHHHHHHhCCCcccEEE
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVC-INYKTEDF----VARVKEETGGKGVDVIL  213 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~~g~~~~-~~~~~~~~----~~~~~~~~~~~~~d~vi  213 (325)
                      +.+++|+|+++.+|..+++.+...|++|+++.++.++. +.++..+...+ .|-.+...    .+.+.+..+  ++|+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id~lv   79 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTD--GLRAII   79 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCC--CccEEE
Confidence            46899999999999999999999999999999876543 33344453221 22222221    222222222  589999


Q ss_pred             eCCCh
Q 020487          214 DCMGA  218 (325)
Q Consensus       214 ~~~g~  218 (325)
                      .+.|.
T Consensus        80 ~~ag~   84 (236)
T PRK06483         80 HNASD   84 (236)
T ss_pred             ECCcc
Confidence            98873

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.012  Score=50.44  Aligned_cols=75  Identities=28%  Similarity=0.392  Sum_probs=50.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCE-EEeCCCchHHHH----HHHHhCCCcccEEEe
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVAR----VKEETGGKGVDVILD  214 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~----~~~~~~~~~~d~vi~  214 (325)
                      +.+++|+|++|.+|..+++.+...|++|++++++.++....  .+... ..|..+......    +.+..+  .+|++|.
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g--~~d~li~   79 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--PGVELLELDVTDDASVQAAVDEVIARAG--RIDVLVN   79 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--CCCeeEEeecCCHHHHHHHHHHHHHhCC--CCCEEEE
Confidence            56899999999999999999999999999999886554322  12221 223333222222    222222  5899999


Q ss_pred             CCCh
Q 020487          215 CMGA  218 (325)
Q Consensus       215 ~~g~  218 (325)
                      |.|.
T Consensus        80 ~ag~   83 (270)
T PRK06179         80 NAGV   83 (270)
T ss_pred             CCCC
Confidence            9984

>PRK08278 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.016  Score=49.78  Aligned_cols=37  Identities=24%  Similarity=0.482  Sum_probs=33.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      .+.+++|+|+++.+|..+++.+...|++|+++.++.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~   41 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAE   41 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccc
Confidence            4678999999999999999999999999999998654

>PRK07985 oxidoreductase; Provisional

Probab=96.48  E-value=0.065  Score=46.59  Aligned_cols=35  Identities=31%  Similarity=0.339  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++.++
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~   82 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLP   82 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCC
Confidence            46789999999999999999999999999987654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.48  E-value=0.025  Score=47.33  Aligned_cols=79  Identities=23%  Similarity=0.323  Sum_probs=50.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchH-HHHHHHHh-CCCccc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF-VARVKEET-GGKGVD  210 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~-~~~~~~~~-~~~~~d  210 (325)
                      +.+++|+|++|.+|..++..+...|++|++++++.++.+...    ..+... .+  |...... ...+.+.. ...++|
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID   86 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence            578999999999999999999899999999999877654432    223221 22  2222221 11222111 112689


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      ++|.+.|.
T Consensus        87 ~vi~~ag~   94 (239)
T PRK07666         87 ILINNAGI   94 (239)
T ss_pred             EEEEcCcc
Confidence            99998864

>PRK05875 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.018  Score=49.44  Aligned_cols=41  Identities=32%  Similarity=0.474  Sum_probs=36.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV  179 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~  179 (325)
                      ++.+++|+|++|.+|..+++.+...|++|++++++.++.+.
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~   46 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAA   46 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            36899999999999999999999999999999988766543

>PRK12743 oxidoreductase; Provisional

Probab=96.47  E-value=0.022  Score=48.32  Aligned_cols=77  Identities=22%  Similarity=0.268  Sum_probs=49.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-hhhHHH----HHHcCCC-EEE--eCCCchH----HHHHHHHhCCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAV----CKDLGAD-VCI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~~g~~-~~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      +.+++|+|+++.+|..+++.+...|++|+++.+. .++.+.    ++..+.. ..+  |..+...    .+.+.+..+  
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLG--   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence            4689999999999999999999999999888643 333322    2334433 222  3333221    223333333  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|++|.+.|.
T Consensus        80 ~id~li~~ag~   90 (256)
T PRK12743         80 RIDVLVNNAGA   90 (256)
T ss_pred             CCCEEEECCCC
Confidence            68999998873

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=96.47  E-value=0.023  Score=48.52  Aligned_cols=78  Identities=23%  Similarity=0.358  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHH----HHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFV----ARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~----~~~~~~~~~~  207 (325)
                      .+.+++|+|+++.+|..++..+...|++|+++.++.++.+...    ..+... .+  |-.+....    ..+.+..+  
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--   86 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG--   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC--
Confidence            4678999999999999999988889999999998877654332    334332 22  33332222    22222233  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      .+|.++.+.|.
T Consensus        87 ~id~li~~ag~   97 (265)
T PRK07097         87 VIDILVNNAGI   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            68999999874

>PRK05650 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.022  Score=48.77  Aligned_cols=77  Identities=19%  Similarity=0.259  Sum_probs=49.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHHHHHHHHh--CCCcccEE
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVARVKEET--GGKGVDVI  212 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~~~~~~~--~~~~~d~v  212 (325)
                      +++|+|++|.+|..++..+...|++|++++++.++.+.+.    ..+.+. .+  |..+......+.+..  ...++|++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999998887655332    223322 22  222222112222111  11368999


Q ss_pred             EeCCCh
Q 020487          213 LDCMGA  218 (325)
Q Consensus       213 i~~~g~  218 (325)
                      |.+.|.
T Consensus        82 I~~ag~   87 (270)
T PRK05650         82 VNNAGV   87 (270)
T ss_pred             EECCCC
Confidence            999874

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.45  E-value=0.091  Score=38.47  Aligned_cols=91  Identities=21%  Similarity=0.189  Sum_probs=64.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH--
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY--  220 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~--  220 (325)
                      ++|.|. |.+|..+++.++..+.+|++++.++++.+.+++.|.. ++..+..+.  ...+..+-..++.++-+.+.+.  
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~--~~l~~a~i~~a~~vv~~~~~d~~n   76 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVE-VIYGDATDP--EVLERAGIEKADAVVILTDDDEEN   76 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSH--HHHHHTTGGCESEEEEESSSHHHH
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccc-cccccchhh--hHHhhcCccccCEEEEccCCHHHH
Confidence            578898 9999999999999777999999999999999988854 444444332  2233334457888888887654  


Q ss_pred             --HHHhhccccCCCEEEEE
Q 020487          221 --FQRNLGSLNIDGRLFII  237 (325)
Q Consensus       221 --~~~~~~~l~~~g~~v~~  237 (325)
                        +....+.+.+..+++..
T Consensus        77 ~~~~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   77 LLIALLARELNPDIRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHTTTSEEEEE
T ss_pred             HHHHHHHHHHCCCCeEEEE
Confidence              23334556677777765

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK07791 short chain dehydrogenase; Provisional

Probab=96.44  E-value=0.029  Score=48.58  Aligned_cols=37  Identities=27%  Similarity=0.335  Sum_probs=32.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      -.+.+++|+|+++++|.++++.+...|++|+++.++.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~   40 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGV   40 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCc
Confidence            3578999999999999999999999999999987654

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.44  E-value=0.027  Score=47.62  Aligned_cols=77  Identities=26%  Similarity=0.417  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHH----HHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVA----RVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~----~~~~~~~~~  207 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++.+...    ..+.. ..+  |..+.....    .+.+..+  
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--   80 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFG--   80 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC--
Confidence            3578999999999999999999889999999999887665432    22322 122  333322222    2222222  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|++|.+++
T Consensus        81 ~~d~vi~~a~   90 (258)
T PRK12429         81 GVDILVNNAG   90 (258)
T ss_pred             CCCEEEECCC
Confidence            6899999886

>PRK08251 short chain dehydrogenase; Provisional

Probab=96.43  E-value=0.034  Score=46.79  Aligned_cols=76  Identities=22%  Similarity=0.331  Sum_probs=50.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----c--CCC-EEE--eCCCchHHH----HHHHHhCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----L--GAD-VCI--NYKTEDFVA----RVKEETGG  206 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~--g~~-~~~--~~~~~~~~~----~~~~~~~~  206 (325)
                      +.+++|+|++|.+|..+++.+...|++|++++++.++.+.+..    .  +.. ..+  |..+.....    .+.+..  
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--   79 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL--   79 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc--
Confidence            4679999999999999999998899999999998877654432    1  221 122  333322222    222222  


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                      .++|+++.+.|
T Consensus        80 ~~id~vi~~ag   90 (248)
T PRK08251         80 GGLDRVIVNAG   90 (248)
T ss_pred             CCCCEEEECCC
Confidence            26899999986

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.43  E-value=0.028  Score=50.18  Aligned_cols=95  Identities=16%  Similarity=0.137  Sum_probs=66.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHHHcC---CC-EEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLG---AD-VCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~~g---~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .+|||+|+ |.+|..+++.+...| .+|++++|+.++.+.+....   .. ..+|-.+   .+.+.+...  ++|+||+|
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d---~~al~~li~--~~d~VIn~   75 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD---VDALVALIK--DFDLVINA   75 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC---hHHHHHHHh--cCCEEEEe
Confidence            46999999 999999999988777 79999999999888876543   21 2333333   234444444  46999999


Q ss_pred             CChHHHHHhh-ccccCCCEEEEEeccC
Q 020487          216 MGASYFQRNL-GSLNIDGRLFIIGTQG  241 (325)
Q Consensus       216 ~g~~~~~~~~-~~l~~~g~~v~~g~~~  241 (325)
                      .+...-..++ .|++.+=.+++...+.
T Consensus        76 ~p~~~~~~i~ka~i~~gv~yvDts~~~  102 (389)
T COG1748          76 APPFVDLTILKACIKTGVDYVDTSYYE  102 (389)
T ss_pred             CCchhhHHHHHHHHHhCCCEEEcccCC
Confidence            9987644454 4556666667664433

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.43  E-value=0.018  Score=48.21  Aligned_cols=42  Identities=26%  Similarity=0.417  Sum_probs=36.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC  180 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (325)
                      ++.+++|+|++|.+|..+++.+...|++|+++++++++.+..
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~   46 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKV   46 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHH
Confidence            367899999999999999999999999999999998766543

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=96.41  E-value=0.026  Score=47.83  Aligned_cols=77  Identities=19%  Similarity=0.323  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHHH----HHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVAR----VKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~~----~~~~~~~~  207 (325)
                      .+.+++|+|+++.+|..++..+...|++|++++++.++.+.+.    ..+.+ ..+  |-.+......    +.+..+  
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~--   87 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG--   87 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence            3789999999999999999999999999999998877654432    23332 222  3222222222    222222  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      .+|+++.+.|
T Consensus        88 ~~d~li~~ag   97 (255)
T PRK06113         88 KVDILVNNAG   97 (255)
T ss_pred             CCCEEEECCC
Confidence            5899999887

>PLN02253 xanthoxin dehydrogenase

Probab=96.39  E-value=0.024  Score=48.80  Aligned_cols=78  Identities=23%  Similarity=0.366  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCC--C-EE--EeCCCchHH----HHHHHHhCCCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--D-VC--INYKTEDFV----ARVKEETGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~--~-~~--~~~~~~~~~----~~~~~~~~~~~  208 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.+..+... +++.  . ..  .|-.+....    +.+.+..+  +
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g--~   94 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG--T   94 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC--C
Confidence            3678999999999999999999889999999998766544332 3321  1 12  233332222    22223333  5


Q ss_pred             ccEEEeCCCh
Q 020487          209 VDVILDCMGA  218 (325)
Q Consensus       209 ~d~vi~~~g~  218 (325)
                      +|+++++.|.
T Consensus        95 id~li~~Ag~  104 (280)
T PLN02253         95 LDIMVNNAGL  104 (280)
T ss_pred             CCEEEECCCc
Confidence            8999998863

>PRK07074 short chain dehydrogenase; Provisional

Probab=96.39  E-value=0.029  Score=47.53  Aligned_cols=79  Identities=25%  Similarity=0.296  Sum_probs=50.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC--EEE--eCCCchHH-HHHHHHh-CCCcccEE
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD--VCI--NYKTEDFV-ARVKEET-GGKGVDVI  212 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~--~~~--~~~~~~~~-~~~~~~~-~~~~~d~v  212 (325)
                      +.+++|+|++|.+|..++..+...|++|++++++.++.+.+. .+...  ..+  |-.+.... ..+.+.. ...++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999999999999999999889999999998877665443 22211  222  22222211 1121111 11258999


Q ss_pred             EeCCCh
Q 020487          213 LDCMGA  218 (325)
Q Consensus       213 i~~~g~  218 (325)
                      +.+.|.
T Consensus        82 i~~ag~   87 (257)
T PRK07074         82 VANAGA   87 (257)
T ss_pred             EECCCC
Confidence            999873

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.37  E-value=0.031  Score=47.33  Aligned_cols=77  Identities=13%  Similarity=0.189  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHc--CCCEE-EeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL--GADVC-INYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~--g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .+.+++|+|++|.+|..++..+...|++|+++.++.++.......  +...+ .|..+.  ...+.+..+ .++|++|.+
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~l~~~~~-~~~d~vi~~   92 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG--SDKLVEAIG-DDSDAVICA   92 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC--HHHHHHHhh-cCCCEEEEC
Confidence            357899999999999999998888899999999887765433211  12211 132221  123334332 268999988


Q ss_pred             CCh
Q 020487          216 MGA  218 (325)
Q Consensus       216 ~g~  218 (325)
                      .|.
T Consensus        93 ~g~   95 (251)
T PLN00141         93 TGF   95 (251)
T ss_pred             CCC
Confidence            764

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=96.37  E-value=0.056  Score=44.36  Aligned_cols=101  Identities=21%  Similarity=0.227  Sum_probs=71.1

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHH----HcCCCEEEeCCC-chHHHHHHHHhCC
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLGADVCINYKT-EDFVARVKEETGG  206 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~-~~~~~~~~~~~~~  206 (325)
                      .++.....++|=+|  +.+|++++.+|..+.  .+++.+..++++.+.++    +.|.+..+.... .+..+.+.+ ...
T Consensus        54 L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~-~~~  130 (219)
T COG4122          54 LARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSR-LLD  130 (219)
T ss_pred             HHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHh-ccC
Confidence            34456788899998  578999999999885  58999999999877665    466654322222 344445544 334


Q ss_pred             CcccEEEeCCCh----HHHHHhhccccCCCEEEEE
Q 020487          207 KGVDVILDCMGA----SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       207 ~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~  237 (325)
                      ..||+||-=...    ..+...++.|++||-++.=
T Consensus       131 ~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D  165 (219)
T COG4122         131 GSFDLVFIDADKADYPEYLERALPLLRPGGLIVAD  165 (219)
T ss_pred             CCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence            589999754443    3478889999999998854

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=96.37  E-value=0.029  Score=47.25  Aligned_cols=79  Identities=23%  Similarity=0.267  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEEeC--CCchHHHH-HHHHhC-CCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCINY--KTEDFVAR-VKEETG-GKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~~~--~~~~~~~~-~~~~~~-~~~~  209 (325)
                      ++.++||+|++|.+|..+++.+...|++|++++++.++...+.    ..+.. .++..  .+...... +.+... ..++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3678999999999999999999999999999998877655432    22322 22222  22222222 222111 1268


Q ss_pred             cEEEeCCC
Q 020487          210 DVILDCMG  217 (325)
Q Consensus       210 d~vi~~~g  217 (325)
                      |++|.+.|
T Consensus        82 d~vi~~ag   89 (250)
T TIGR03206        82 DVLVNNAG   89 (250)
T ss_pred             CEEEECCC
Confidence            99999987

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.36  E-value=0.075  Score=39.21  Aligned_cols=99  Identities=16%  Similarity=0.258  Sum_probs=65.6

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHH----HcCCC--EEEeCCCchHHHHHHHHhC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK----DLGAD--VCINYKTEDFVARVKEETG  205 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~----~~g~~--~~~~~~~~~~~~~~~~~~~  205 (325)
                      ....+.++++++-+|+ |. |..+..+++..+ .+|+.++.++...+.++    ..+..  .++..+....   ....  
T Consensus        13 ~~~~~~~~~~vldlG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~---~~~~--   85 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGA-GS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEA---LEDS--   85 (124)
T ss_pred             HHcCCCCCCEEEEeCC-CC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecccccc---Chhh--
Confidence            4446677889999997 44 888999998874 69999999988776654    23332  2222221110   1111  


Q ss_pred             CCcccEEEeCCChH----HHHHhhccccCCCEEEEEe
Q 020487          206 GKGVDVILDCMGAS----YFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       206 ~~~~d~vi~~~g~~----~~~~~~~~l~~~g~~v~~g  238 (325)
                      ...+|.|+...+..    .+..+.+.|+++|+++...
T Consensus        86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~  122 (124)
T TIGR02469        86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA  122 (124)
T ss_pred             cCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence            13699999765432    3677889999999998753

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.36  E-value=0.046  Score=47.03  Aligned_cols=78  Identities=17%  Similarity=0.157  Sum_probs=57.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      -.|.+++|+|+++.+|..++.++...|++|++.-+..+                       .+.+.+  +.+|++++++|
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~-----------------------~L~~~~--~~aDIvI~AtG  211 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ-----------------------NLPELV--KQADIIVGAVG  211 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch-----------------------hHHHHh--ccCCEEEEccC
Confidence            35889999999667999999999999998887764211                       112222  36899999998


Q ss_pred             hHHHHHhhccccCCCEEEEEeccC
Q 020487          218 ASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       218 ~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      .+.+ --.+.++++..++++|...
T Consensus       212 ~~~~-v~~~~lk~gavViDvg~n~  234 (283)
T PRK14192        212 KPEL-IKKDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             CCCc-CCHHHcCCCCEEEEEEEee
Confidence            6552 2236689999999998654

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.35  E-value=0.041  Score=47.20  Aligned_cols=90  Identities=13%  Similarity=0.097  Sum_probs=59.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc---CCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL---GADVCINYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                      ..+.+++|+|+ |.+|.+++..+...|++|++..++.++.+.+. .+   +........      .   . ....+|++|
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~------~---~-~~~~~DivI  183 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD------E---L-PLHRVDLII  183 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh------h---h-cccCccEEE
Confidence            45788999998 89999999988888999999999887765443 32   211121110      1   1 112589999


Q ss_pred             eCCChHHHH------HhhccccCCCEEEEEe
Q 020487          214 DCMGASYFQ------RNLGSLNIDGRLFIIG  238 (325)
Q Consensus       214 ~~~g~~~~~------~~~~~l~~~g~~v~~g  238 (325)
                      +|++.....      ...+.++++..++++.
T Consensus       184 natp~gm~~~~~~~~~~~~~l~~~~~v~D~~  214 (270)
T TIGR00507       184 NATSAGMSGNIDEPPVPAEKLKEGMVVYDMV  214 (270)
T ss_pred             ECCCCCCCCCCCCCCCCHHHcCCCCEEEEec
Confidence            998863211      1134567777777773

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.32  E-value=0.029  Score=48.14  Aligned_cols=149  Identities=17%  Similarity=0.197  Sum_probs=86.2

Q ss_pred             CCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHH--HHHhhcCCCCCCEEEEEcCCchHHHH
Q 020487           78 RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWS--TVFMTSHLSPGESFLVHGGSSGIGTF  155 (325)
Q Consensus        78 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~--~l~~~~~~~~~~~vli~g~~g~~G~~  155 (325)
                      -+++|++.+..++   |.+|..-....++++..++.+-    -.+...|++.  +|.+  .+++|.++|=.|+  +.|.+
T Consensus       108 P~rig~~f~I~Ps---w~~~~~~~~~~~i~lDPGlAFG----TG~HpTT~lcL~~Le~--~~~~g~~vlDvGc--GSGIL  176 (300)
T COG2264         108 PVRIGERFVIVPS---WREYPEPSDELNIELDPGLAFG----TGTHPTTSLCLEALEK--LLKKGKTVLDVGC--GSGIL  176 (300)
T ss_pred             cEEeeeeEEECCC---CccCCCCCCceEEEEccccccC----CCCChhHHHHHHHHHH--hhcCCCEEEEecC--ChhHH
Confidence            3667888777754   5444222234566666555443    2333344433  3433  3468999999996  34666


Q ss_pred             HHHHHHHCCC-EEEEEecChhhHHHHHH----cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH----HHHHhhc
Q 020487          156 AIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS----YFQRNLG  226 (325)
Q Consensus       156 ~~~~a~~~g~-~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~----~~~~~~~  226 (325)
                      ++..++ +|+ +|++++..+...+.+++    -+... .......   ...+...++.||+|+.+.=-.    ....+..
T Consensus       177 aIAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~-~~~~~~~---~~~~~~~~~~~DvIVANILA~vl~~La~~~~~  251 (300)
T COG2264         177 AIAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVEL-LVQAKGF---LLLEVPENGPFDVIVANILAEVLVELAPDIKR  251 (300)
T ss_pred             HHHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCch-hhhcccc---cchhhcccCcccEEEehhhHHHHHHHHHHHHH
Confidence            665554 477 69999988776665543    22221 0000000   111112234799999886432    2456678


Q ss_pred             cccCCCEEEEEeccCC
Q 020487          227 SLNIDGRLFIIGTQGG  242 (325)
Q Consensus       227 ~l~~~g~~v~~g~~~~  242 (325)
                      .++|+|++++.|....
T Consensus       252 ~lkpgg~lIlSGIl~~  267 (300)
T COG2264         252 LLKPGGRLILSGILED  267 (300)
T ss_pred             HcCCCceEEEEeehHh
Confidence            8999999999987654

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=96.29  E-value=0.035  Score=46.51  Aligned_cols=78  Identities=29%  Similarity=0.427  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEE--eCCCchHH----HHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDFV----ARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~~----~~~~~~~~~~~~d  210 (325)
                      ++.+++|+|++|.+|..++..+...|+.|+...++.++.+... .++.. ..+  |-.+....    ..+.+..+  ++|
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id   82 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLE--GVD   82 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC--CCC
Confidence            3678999999999999999999889999988887776665443 33332 222  22222211    12222232  689


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      .+|.+.|.
T Consensus        83 ~vi~~ag~   90 (245)
T PRK12936         83 ILVNNAGI   90 (245)
T ss_pred             EEEECCCC
Confidence            99999873

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.29  E-value=0.034  Score=43.59  Aligned_cols=77  Identities=25%  Similarity=0.322  Sum_probs=47.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC--hhhHHHH----HHcCCCE-EE--eCCCchHHHHHHH-Hh-CCCcc
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGS--EEKLAVC----KDLGADV-CI--NYKTEDFVARVKE-ET-GGKGV  209 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~--~~~~~~~----~~~g~~~-~~--~~~~~~~~~~~~~-~~-~~~~~  209 (325)
                      +++|+|+++++|..+++.+...|. +|+++.++  .++.+.+    +..+... ++  |.......+.+.+ .. ....+
T Consensus         2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~l   81 (167)
T PF00106_consen    2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGPL   81 (167)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            689999999999999999988876 77888888  3433332    3344321 22  2222222222222 11 12368


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |++|.|.|.
T Consensus        82 d~li~~ag~   90 (167)
T PF00106_consen   82 DILINNAGI   90 (167)
T ss_dssp             SEEEEECSC
T ss_pred             ccccccccc
Confidence            999998874

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06914 short chain dehydrogenase; Provisional

Probab=96.27  E-value=0.052  Score=46.66  Aligned_cols=79  Identities=18%  Similarity=0.174  Sum_probs=51.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCC--C-EEE--eCCCchHHHHHHHHh-CCCcc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA--D-VCI--NYKTEDFVARVKEET-GGKGV  209 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~--~-~~~--~~~~~~~~~~~~~~~-~~~~~  209 (325)
                      +.+++|+|++|.+|..++..+...|++|++++++.+..+...+    .+.  . ..+  |..+......+.+.. ...++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   82 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI   82 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence            5689999999999999999999999999999988776544432    221  1 222  333322222222221 11268


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |.++.|.|.
T Consensus        83 d~vv~~ag~   91 (280)
T PRK06914         83 DLLVNNAGY   91 (280)
T ss_pred             eEEEECCcc
Confidence            999999863

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=96.25  E-value=0.034  Score=47.16  Aligned_cols=40  Identities=30%  Similarity=0.320  Sum_probs=34.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHH
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV  179 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~  179 (325)
                      +.+++|+|++|.+|..++..+...|++|+.++++..+.+.
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~   41 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAAN   41 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            4689999999999999999999999999999988765543

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=96.22  E-value=0.031  Score=47.28  Aligned_cols=78  Identities=26%  Similarity=0.457  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCC-EEE--eCCCchHH----HHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGAD-VCI--NYKTEDFV----ARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~-~~~--~~~~~~~~----~~~~~~~~~~  207 (325)
                      .+.+++|+|+++.+|..++..+...|++|+++.++.+..+.+    ++.+.. ..+  |..+....    +.+.+..+  
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--   87 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHG--   87 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC--
Confidence            478999999999999999998888999999999987655433    223322 122  33332222    22222222  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      .+|.++.+.|.
T Consensus        88 ~id~vi~~ag~   98 (256)
T PRK06124         88 RLDILVNNVGA   98 (256)
T ss_pred             CCCEEEECCCC
Confidence            68999998874

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=96.22  E-value=0.029  Score=50.05  Aligned_cols=77  Identities=13%  Similarity=0.075  Sum_probs=50.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH-HHc--CCC-EEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDL--GAD-VCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      +.++||+|++|.+|..+++.+...|.+|+++.++....... ..+  +.. ..+..+-.+ ...+.+.....++|+||.+
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~d~vih~   82 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD-AAKLRKAIAEFKPEIVFHL   82 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCC-HHHHHHHHhhcCCCEEEEC
Confidence            67899999999999999999999999999998766543222 112  111 122222222 2233444433368999999


Q ss_pred             CC
Q 020487          216 MG  217 (325)
Q Consensus       216 ~g  217 (325)
                      ++
T Consensus        83 A~   84 (349)
T TIGR02622        83 AA   84 (349)
T ss_pred             Cc
Confidence            87

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.22  E-value=0.033  Score=47.52  Aligned_cols=79  Identities=18%  Similarity=0.224  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCCEEE--eCCCchHHHHHHH-HhC-CCc
Q 020487          139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCI--NYKTEDFVARVKE-ETG-GKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g--~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~--~~~~~~~~~~~~~-~~~-~~~  208 (325)
                      .+.+++|+|+++  ++|.++++.+...|++|++..+++...+.+++    .+....+  |-.+....+.+.+ ... ...
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            478899999964  89999999999999999988876421222222    2222222  3333222222222 111 125


Q ss_pred             ccEEEeCCC
Q 020487          209 VDVILDCMG  217 (325)
Q Consensus       209 ~d~vi~~~g  217 (325)
                      +|+++++.|
T Consensus        85 iD~linnAg   93 (262)
T PRK07984         85 FDGFVHSIG   93 (262)
T ss_pred             CCEEEECCc
Confidence            899999987

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.22  E-value=0.037  Score=48.39  Aligned_cols=80  Identities=18%  Similarity=0.289  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh-hHH----HHHHcCCCE-EE--eCCCchHHHHHHHH-hCCCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLA----VCKDLGADV-CI--NYKTEDFVARVKEE-TGGKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~-~~~----~~~~~g~~~-~~--~~~~~~~~~~~~~~-~~~~~~  209 (325)
                      .+.+++|+|+++.+|...++.+...|++|++.++... ..+    .++..+... .+  |-.+......+.+. .....+
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i   90 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL   90 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence            4688999999999999999999999999999876432 222    223334332 22  22222222222221 111368


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |++|++.|.
T Consensus        91 D~li~nAG~   99 (306)
T PRK07792         91 DIVVNNAGI   99 (306)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.21  E-value=0.051  Score=47.59  Aligned_cols=90  Identities=18%  Similarity=0.204  Sum_probs=62.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .+|.|+|+ |.+|.+.+..++..|.  +|++.++++++.+.+++.|......   ...    .+..  ..+|+|+.|+..
T Consensus         7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~~----~~~~--~~aDvViiavp~   76 (307)
T PRK07502          7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TSA----AEAV--KGADLVILCVPV   76 (307)
T ss_pred             cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CCH----HHHh--cCCCEEEECCCH
Confidence            57999997 9999999999988884  8999999988888887777532111   111    1112  258999999987


Q ss_pred             HHH----HHhhccccCCCEEEEEecc
Q 020487          219 SYF----QRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       219 ~~~----~~~~~~l~~~g~~v~~g~~  240 (325)
                      ...    ..+...++++..++.+|..
T Consensus        77 ~~~~~v~~~l~~~l~~~~iv~dvgs~  102 (307)
T PRK07502         77 GASGAVAAEIAPHLKPGAIVTDVGSV  102 (307)
T ss_pred             HHHHHHHHHHHhhCCCCCEEEeCccc
Confidence            543    3334456777767666543

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=96.21  E-value=0.041  Score=46.81  Aligned_cols=77  Identities=17%  Similarity=0.255  Sum_probs=47.6

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCh------hhHHHHHHcCCC-EEE--eCCCchH----HHHHHHH
Q 020487          139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSE------EKLAVCKDLGAD-VCI--NYKTEDF----VARVKEE  203 (325)
Q Consensus       139 ~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~------~~~~~~~~~g~~-~~~--~~~~~~~----~~~~~~~  203 (325)
                      .+.+++|+|++  +++|.++++.+...|++|+++.++.      +..+.+++.+.. ..+  |-.+...    .+.+.+.
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            46889999985  7999999999999999998875432      222333322211 222  3333222    2223333


Q ss_pred             hCCCcccEEEeCCC
Q 020487          204 TGGKGVDVILDCMG  217 (325)
Q Consensus       204 ~~~~~~d~vi~~~g  217 (325)
                      .+  .+|+++++.|
T Consensus        85 ~g--~iD~lv~nag   96 (258)
T PRK07370         85 WG--KLDILVHCLA   96 (258)
T ss_pred             cC--CCCEEEEccc
Confidence            33  6899999987

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.20  E-value=0.035  Score=45.49  Aligned_cols=97  Identities=20%  Similarity=0.088  Sum_probs=64.6

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHH----HcCCC---EEEeCCCchHHHHHHHH
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLGAD---VCINYKTEDFVARVKEE  203 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~----~~g~~---~~~~~~~~~~~~~~~~~  203 (325)
                      +...++++++||-.|+  +.|..++.+++..+  .+|+.++.+++..+.++    ..+..   .++..+....   +   
T Consensus        66 ~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~---~---  137 (205)
T PRK13944         66 ELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRG---L---  137 (205)
T ss_pred             HhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccC---C---
Confidence            5566789999999996  45777777777764  59999999988665554    34432   2232222111   1   


Q ss_pred             hCCCcccEEEeCCChHH-HHHhhccccCCCEEEEE
Q 020487          204 TGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII  237 (325)
Q Consensus       204 ~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~  237 (325)
                      .....||.|+-+..... ...+.+.|++||+++..
T Consensus       138 ~~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        138 EKHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             ccCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence            11247999987766544 36667899999999764

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=96.20  E-value=0.08  Score=39.54  Aligned_cols=51  Identities=12%  Similarity=0.218  Sum_probs=37.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHCC--CEEEEEecChh--h-HHHHHHcCCCEEEeCCC
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEE--K-LAVCKDLGADVCINYKT  193 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~--~-~~~~~~~g~~~~~~~~~  193 (325)
                      |.|+|+||++|..+..+.+++.  ++|+..+....  . .++++++...++.-.+.
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~   56 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADE   56 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH
Confidence            5799999999999999999996  68888774333  2 24556788777765544

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK06701 short chain dehydrogenase; Provisional

Probab=96.17  E-value=0.04  Score=47.81  Aligned_cols=37  Identities=27%  Similarity=0.392  Sum_probs=32.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      .+.++||+|++|.+|..++..+...|++|+++.++..
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~   81 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEH   81 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            4678999999999999999999889999999987653

>PRK07775 short chain dehydrogenase; Provisional

Probab=96.16  E-value=0.047  Score=46.86  Aligned_cols=79  Identities=23%  Similarity=0.233  Sum_probs=50.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHHHHHHHHh--CCCccc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVARVKEET--GGKGVD  210 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~~~~~~~--~~~~~d  210 (325)
                      ..+++|+|++|.+|..+++.+...|++|++++++.++.+...    ..+... .+  |..+......+.+..  .-.++|
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   89 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE   89 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            458999999999999999999999999999998776554332    234332 22  222222222222211  012689


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      .+|.+.|.
T Consensus        90 ~vi~~Ag~   97 (274)
T PRK07775         90 VLVSGAGD   97 (274)
T ss_pred             EEEECCCc
Confidence            99998874

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.16  E-value=0.041  Score=46.34  Aligned_cols=77  Identities=26%  Similarity=0.352  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecChhhHHH----HHHcCCCE-EE--eCCCchHHH----HHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAV----CKDLGADV-CI--NYKTEDFVA----RVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~-~~~~~~~~~----~~~~g~~~-~~--~~~~~~~~~----~~~~~~~~  206 (325)
                      ++.+++|+|++|.+|..++..+...|++|++. .++.++.+.    .+..+... .+  |..+.....    .+.+..+ 
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG-   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence            46789999999999999999999999998764 556554432    22334322 22  222222111    2222222 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       .+|++|.+.|
T Consensus        82 -~id~vi~~ag   91 (250)
T PRK08063         82 -RLDVFVNNAA   91 (250)
T ss_pred             -CCCEEEECCC
Confidence             5899999887

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.16  E-value=0.061  Score=41.94  Aligned_cols=86  Identities=17%  Similarity=0.019  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+|+|.|+ |.+|.--++.+...|++|+++.  ++..+.+++++.-.. .... ....      .-.++|+|+.++++
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~~l~~i~~-~~~~-~~~~------dl~~a~lViaaT~d   80 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMKELPYITW-KQKT-FSND------DIKDAHLIYAATNQ   80 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHHhccCcEE-Eecc-cChh------cCCCceEEEECCCC
Confidence            4789999998 9999998888888899999885  333344444542221 1111 1011      12368999999998


Q ss_pred             HHHHHhhccccCCCEEE
Q 020487          219 SYFQRNLGSLNIDGRLF  235 (325)
Q Consensus       219 ~~~~~~~~~l~~~g~~v  235 (325)
                      +..+..+........++
T Consensus        81 ~e~N~~i~~~a~~~~~v   97 (157)
T PRK06719         81 HAVNMMVKQAAHDFQWV   97 (157)
T ss_pred             HHHHHHHHHHHHHCCcE
Confidence            87765554443333333

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.15  E-value=0.06  Score=42.29  Aligned_cols=86  Identities=22%  Similarity=0.228  Sum_probs=58.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH-H
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-Y  220 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~  220 (325)
                      +|.++|. |.+|...+.-+...|++|++..++.++.+.+.+.|+... +    + ..++.+     ..|+|+-|+.+. .
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~-~----s-~~e~~~-----~~dvvi~~v~~~~~   70 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVA-D----S-PAEAAE-----QADVVILCVPDDDA   70 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEE-S----S-HHHHHH-----HBSEEEE-SSSHHH
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhh-h----h-hhhHhh-----cccceEeecccchh
Confidence            6889998 999999999999999999999999999988888774322 1    1 122222     469999998863 3


Q ss_pred             HHH------hhccccCCCEEEEEec
Q 020487          221 FQR------NLGSLNIDGRLFIIGT  239 (325)
Q Consensus       221 ~~~------~~~~l~~~g~~v~~g~  239 (325)
                      ...      ++..+.++..++.++.
T Consensus        71 v~~v~~~~~i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   71 VEAVLFGENILAGLRPGKIIIDMST   95 (163)
T ss_dssp             HHHHHHCTTHGGGS-TTEEEEE-SS
T ss_pred             hhhhhhhhHHhhccccceEEEecCC
Confidence            333      4555667777777754

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK07577 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.031  Score=46.52  Aligned_cols=74  Identities=22%  Similarity=0.233  Sum_probs=49.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC-EEEeCCCch-HHHHHHHHhCCCcccEEEeCCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTED-FVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~-~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +.+++|+|++|.+|..+++.+...|++|+++.++.++     ..... ...|..+.. ....+.+.....++|+++.+.|
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag   77 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----DFPGELFACDLADIEQTAATLAQINEIHPVDAIVNNVG   77 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----ccCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCC
Confidence            5789999999999999999999999999999987654     11111 122333322 2222333333336899999887


Q ss_pred             h
Q 020487          218 A  218 (325)
Q Consensus       218 ~  218 (325)
                      .
T Consensus        78 ~   78 (234)
T PRK07577         78 I   78 (234)
T ss_pred             C
Confidence            3

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=96.15  E-value=0.04  Score=49.98  Aligned_cols=80  Identities=23%  Similarity=0.363  Sum_probs=50.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHH-------HHHHcCCCEEE--eCCCchHHHHHHHHhCCCc
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-------VCKDLGADVCI--NYKTEDFVARVKEETGGKG  208 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~-------~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~  208 (325)
                      ..+.+|+|+|++|.+|..+++.+...|++|++++++..+..       .........++  |..+......+.+..+ .+
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~-~~  136 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG-DP  136 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC-CC
Confidence            44678999999999999999999889999999998765421       11112112222  3333322222222111 16


Q ss_pred             ccEEEeCCCh
Q 020487          209 VDVILDCMGA  218 (325)
Q Consensus       209 ~d~vi~~~g~  218 (325)
                      +|+||+|.+.
T Consensus       137 ~D~Vi~~aa~  146 (390)
T PLN02657        137 VDVVVSCLAS  146 (390)
T ss_pred             CcEEEECCcc
Confidence            8999998863

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.14  E-value=0.037  Score=46.20  Aligned_cols=71  Identities=18%  Similarity=0.234  Sum_probs=53.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecChh--hHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      |+|+|++|.+|..+++.+...+.+|.+.+|+..  ....+++.|+..+ ..+-. -.+.+.+.+.  ++|.||.+.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~-~~~~l~~al~--g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVV-EADYD-DPESLVAALK--GVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEE-ES-TT--HHHHHHHHT--TCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEe-ecccC-CHHHHHHHHc--CCceEEeecC
Confidence            789999999999999999999999999999864  3456677888544 32222 2455666664  7999999888

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.14  E-value=0.044  Score=45.91  Aligned_cols=37  Identities=35%  Similarity=0.452  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      .+.+++|+|++|.+|..++..+...|++|+++.++..
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~   40 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSE   40 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCch
Confidence            3568999999999999999999999999988876654

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.14  E-value=0.066  Score=45.31  Aligned_cols=78  Identities=28%  Similarity=0.369  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh-hHHHHHHcCCCEE-EeCCCchHHH----HHHHHhCCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVC-INYKTEDFVA----RVKEETGGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~-~~~~~~~~g~~~~-~~~~~~~~~~----~~~~~~~~~~~d~v  212 (325)
                      .+.+++|+|+++.+|..+++.+...|++|+++.+..+ ..+.++..+...+ .|-.+.....    .+.+..+  ++|++
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--~id~l   83 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFG--RVDVL   83 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcC--CCCEE
Confidence            3678999999999999999999999999988765433 3334443333221 2333322222    2222222  68999


Q ss_pred             EeCCCh
Q 020487          213 LDCMGA  218 (325)
Q Consensus       213 i~~~g~  218 (325)
                      |.|.|.
T Consensus        84 i~~ag~   89 (255)
T PRK06463         84 VNNAGI   89 (255)
T ss_pred             EECCCc
Confidence            998864

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.14  E-value=0.012  Score=48.66  Aligned_cols=97  Identities=21%  Similarity=0.101  Sum_probs=63.3

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHH----HcCCCE--EEeCCCchHHHHHHHHh
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLGADV--CINYKTEDFVARVKEET  204 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~~  204 (325)
                      +...++++++||-+|+  +.|..++.+++..+  .+|+.++.+++..+.++    +.+.+.  ++..+....      ..
T Consensus        71 ~~l~~~~~~~VLDiG~--GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~------~~  142 (215)
T TIGR00080        71 ELLELKPGMKVLEIGT--GSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQG------WE  142 (215)
T ss_pred             HHhCCCCcCEEEEECC--CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccC------Cc
Confidence            5567889999999996  45777777887764  37999998888766554    344432  222221110      01


Q ss_pred             CCCcccEEEeCCChH-HHHHhhccccCCCEEEEE
Q 020487          205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~  237 (325)
                      ....||+|+-+.... ....+.+.|++||+++..
T Consensus       143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       143 PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence            123799988654433 345677899999998865

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=96.11  E-value=0.035  Score=47.99  Aligned_cols=146  Identities=21%  Similarity=0.257  Sum_probs=80.7

Q ss_pred             CCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHH--HHHHhhcCCCCCCEEEEEcCCchHHHH
Q 020487           78 RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW--STVFMTSHLSPGESFLVHGGSSGIGTF  155 (325)
Q Consensus        78 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~--~~l~~~~~~~~~~~vli~g~~g~~G~~  155 (325)
                      -+++|++.+..+.   |.++-.-+...++.+.+.+.+-.+.    ..+|..  .+|.+.  ..+|++||=.|+  +.|.+
T Consensus       107 P~~vg~~~~I~P~---w~~~~~~~~~~~I~idPg~AFGTG~----H~TT~lcl~~l~~~--~~~g~~vLDvG~--GSGIL  175 (295)
T PF06325_consen  107 PIRVGDRLVIVPS---WEEYPEPPDEIVIEIDPGMAFGTGH----HPTTRLCLELLEKY--VKPGKRVLDVGC--GSGIL  175 (295)
T ss_dssp             -EEECTTEEEEET---T----SSTTSEEEEESTTSSS-SSH----CHHHHHHHHHHHHH--SSTTSEEEEES---TTSHH
T ss_pred             cEEECCcEEEECC---CcccCCCCCcEEEEECCCCcccCCC----CHHHHHHHHHHHHh--ccCCCEEEEeCC--cHHHH
Confidence            3667887777754   5555222344566666555543321    222222  223233  578899999986  33555


Q ss_pred             HHHHHHHCCC-EEEEEecChhhHHHHHH----cCC-CEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH----HHHhh
Q 020487          156 AIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGA-DVCINYKTEDFVARVKEETGGKGVDVILDCMGASY----FQRNL  225 (325)
Q Consensus       156 ~~~~a~~~g~-~v~~~~~~~~~~~~~~~----~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~----~~~~~  225 (325)
                      ++..++ +|+ +|++++..+...+.+++    -+. +.+.........        ...||+|+.+.-...    ...+.
T Consensus       176 aiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~~~--------~~~~dlvvANI~~~vL~~l~~~~~  246 (295)
T PF06325_consen  176 AIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSEDLV--------EGKFDLVVANILADVLLELAPDIA  246 (295)
T ss_dssp             HHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSCTC--------CS-EEEEEEES-HHHHHHHHHHCH
T ss_pred             HHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecccc--------cccCCEEEECCCHHHHHHHHHHHH
Confidence            555454 488 79999988776655542    121 222111111111        147999999887654    34556


Q ss_pred             ccccCCCEEEEEeccCCc
Q 020487          226 GSLNIDGRLFIIGTQGGA  243 (325)
Q Consensus       226 ~~l~~~g~~v~~g~~~~~  243 (325)
                      +.++++|.+++.|....+
T Consensus       247 ~~l~~~G~lIlSGIl~~~  264 (295)
T PF06325_consen  247 SLLKPGGYLILSGILEEQ  264 (295)
T ss_dssp             HHEEEEEEEEEEEEEGGG
T ss_pred             HhhCCCCEEEEccccHHH
Confidence            788999999999987654

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.10  E-value=0.022  Score=48.21  Aligned_cols=74  Identities=16%  Similarity=0.179  Sum_probs=56.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      +|+|+|++|- |..++..+...|.+|++.++++...+.+...|...+.....+  ...+.+.....++|+|+|++-.
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~--~~~l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALD--PQELREFLKRHSIDILVDATHP   75 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCC--HHHHHHHHHhcCCCEEEEcCCH
Confidence            6999999776 999998888889999999999987777776665555433222  2346666666789999999865

This enzyme was found to be a monomer by gel filtration.

>PRK06523 short chain dehydrogenase; Provisional

Probab=96.08  E-value=0.0089  Score=50.79  Aligned_cols=72  Identities=33%  Similarity=0.475  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC-EEE--eCCCchHHH----HHHHHhCCCcccE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCI--NYKTEDFVA----RVKEETGGKGVDV  211 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~--~~~~~~~~~----~~~~~~~~~~~d~  211 (325)
                      ++.+++|+|++|.+|..+++.+...|++|+++.++....     .+.. ..+  |-.+.....    .+.+..+  .+|+
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id~   80 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLERLG--GVDI   80 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHHHcC--CCCE
Confidence            478999999999999999999999999999999875432     1111 122  333322222    2223333  6899


Q ss_pred             EEeCCC
Q 020487          212 ILDCMG  217 (325)
Q Consensus       212 vi~~~g  217 (325)
                      ++++.|
T Consensus        81 vi~~ag   86 (260)
T PRK06523         81 LVHVLG   86 (260)
T ss_pred             EEECCc
Confidence            999887

>PRK08219 short chain dehydrogenase; Provisional

Probab=96.08  E-value=0.073  Score=44.00  Aligned_cols=76  Identities=17%  Similarity=0.204  Sum_probs=50.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCC-CcccEEEeCCCh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGG-KGVDVILDCMGA  218 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~-~~~d~vi~~~g~  218 (325)
                      .+++|+|++|.+|..++..+... ++|+++.++.++.+.+.+ .....++..+-.+ ...+.+.... .++|.+|.+.|.
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~id~vi~~ag~   81 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTD-PEAIAAAVEQLGRLDVLVHNAGV   81 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCC-HHHHHHHHHhcCCCCEEEECCCc
Confidence            57999999999999999888777 999999998877655542 2222333333222 2233333221 268999999874

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=96.08  E-value=0.058  Score=45.48  Aligned_cols=76  Identities=28%  Similarity=0.404  Sum_probs=50.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCCE-EE--eCCCchHH----HHHHHHhCCCcc
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-CI--NYKTEDFV----ARVKEETGGKGV  209 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~-~~--~~~~~~~~----~~~~~~~~~~~~  209 (325)
                      .++||+|++|.+|..++..+...|++|++++++.++.+.+.+    .+... .+  |..+....    ..+.+..+  +.
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~~   79 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFG--GL   79 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC--CC
Confidence            579999999999999999998999999999998876654432    23221 22  33332211    12222222  58


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |++|.+.+.
T Consensus        80 d~vi~~a~~   88 (255)
T TIGR01963        80 DILVNNAGI   88 (255)
T ss_pred             CEEEECCCC
Confidence            999988753

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.05  E-value=0.094  Score=47.77  Aligned_cols=73  Identities=10%  Similarity=0.159  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      .+.+++|+|+ |.+|.+++..+...|+ +++++.|+.++.+.+. .++....+.      .+.+.+...  .+|+||+|+
T Consensus       180 ~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~------~~~l~~~l~--~aDiVI~aT  250 (414)
T PRK13940        180 SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY------LSELPQLIK--KADIIIAAV  250 (414)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec------HHHHHHHhc--cCCEEEECc
Confidence            4788999998 9999999999999997 7999999987765544 454222221      233334333  589999999


Q ss_pred             ChHH
Q 020487          217 GASY  220 (325)
Q Consensus       217 g~~~  220 (325)
                      +.+.
T Consensus       251 ~a~~  254 (414)
T PRK13940        251 NVLE  254 (414)
T ss_pred             CCCC
Confidence            9764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=96.05  E-value=0.034  Score=46.73  Aligned_cols=78  Identities=31%  Similarity=0.372  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhH-HHH---HHcCCCEE---EeCCCch----HHHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKL-AVC---KDLGADVC---INYKTED----FVARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~-~~~---~~~g~~~~---~~~~~~~----~~~~~~~~~~~  206 (325)
                      ++.+++|+|++|.+|..+++.+...|++|++..+ +..+. +..   +..+....   .|..+..    ..+.+.+..+ 
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   80 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG-   80 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC-
Confidence            3578999999999999999999999999888653 22222 222   23344322   2222221    1222223333 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       ++|+++.|.|.
T Consensus        81 -~id~li~~ag~   91 (246)
T PRK12938         81 -EIDVLVNNAGI   91 (246)
T ss_pred             -CCCEEEECCCC
Confidence             68999999874

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.04  E-value=0.023  Score=53.21  Aligned_cols=72  Identities=19%  Similarity=0.269  Sum_probs=53.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      +.++++++|+|. |..|++++++++..|++|++.+....+.+.+++.|... +....  ....+      ..+|+|+.+.
T Consensus         9 ~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~-~~~~~--~~~~l------~~~D~VV~Sp   78 (488)
T PRK03369          9 LLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVAT-VSTSD--AVQQI------ADYALVVTSP   78 (488)
T ss_pred             ccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEE-EcCcc--hHhHh------hcCCEEEECC
Confidence            457899999998 99999999999999999999987766666666777643 22111  11111      2579999998


Q ss_pred             Ch
Q 020487          217 GA  218 (325)
Q Consensus       217 g~  218 (325)
                      |.
T Consensus        79 Gi   80 (488)
T PRK03369         79 GF   80 (488)
T ss_pred             CC
Confidence            85

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.00  E-value=0.06  Score=45.71  Aligned_cols=78  Identities=24%  Similarity=0.354  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEecCh--hhHHHH-HHcCCC-EEE--eCCCchHHHH----HHHHhCC
Q 020487          139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVC-KDLGAD-VCI--NYKTEDFVAR----VKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~--~g~~G~~~~~~a~~~g~~v~~~~~~~--~~~~~~-~~~g~~-~~~--~~~~~~~~~~----~~~~~~~  206 (325)
                      .+.+++|+|+  ++++|.++++.+...|++|+++.++.  +..+.+ ++++.. ..+  |-.+....+.    +.+..+ 
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g-   84 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD-   84 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC-
Confidence            4678999998  79999999999999999999988653  333333 234321 122  3333222222    222222 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       .+|+++++.|.
T Consensus        85 -~iD~li~nAG~   95 (256)
T PRK07889         85 -GLDGVVHSIGF   95 (256)
T ss_pred             -CCcEEEEcccc
Confidence             68999998863

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=96.00  E-value=0.044  Score=48.23  Aligned_cols=76  Identities=17%  Similarity=0.213  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHc----CC--C-EEEeCCCchHHHHHHHHhCCCcccE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GA--D-VCINYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~----g~--~-~~~~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      .|.+|+|+|++|.+|..++..+...|++|+++.++..+.+....+    +.  . ..+..+-.+ ...+.+...  ++|+
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~--~~d~   80 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLE-ESSFEQAIE--GCDA   80 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCC-cchHHHHHh--CCCE
Confidence            468999999999999999999988999999988876544332211    11  1 222222111 122333332  5899


Q ss_pred             EEeCCC
Q 020487          212 ILDCMG  217 (325)
Q Consensus       212 vi~~~g  217 (325)
                      ||.+++
T Consensus        81 vih~A~   86 (322)
T PLN02986         81 VFHTAS   86 (322)
T ss_pred             EEEeCC
Confidence            998886

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.00  E-value=0.023  Score=46.42  Aligned_cols=90  Identities=10%  Similarity=0.075  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh-hHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .|.+|+|.|+ |.+|...+..+...|++|+++.+... ....+.+.+. ..+...... ...      -.++|+||.|++
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~-i~~~~~~~~-~~~------l~~adlViaaT~   79 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGK-IRWKQKEFE-PSD------IVDAFLVIAATN   79 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCC-EEEEecCCC-hhh------cCCceEEEEcCC
Confidence            4789999998 99999999888889999999875432 1122212221 111111100 111      136899999999


Q ss_pred             hHHHHHhhccccCCCEEEEE
Q 020487          218 ASYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       218 ~~~~~~~~~~l~~~g~~v~~  237 (325)
                      .+.++..+......+.++..
T Consensus        80 d~elN~~i~~~a~~~~lvn~   99 (202)
T PRK06718         80 DPRVNEQVKEDLPENALFNV   99 (202)
T ss_pred             CHHHHHHHHHHHHhCCcEEE
Confidence            88765554433333445544

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.00  E-value=0.026  Score=45.41  Aligned_cols=95  Identities=22%  Similarity=0.254  Sum_probs=59.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHH----HcCCCEEEeCCCchHHHHHHHHhCCCcccE
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      ++++.+||-+|+  +.|..+..+++.. +++|+.++.+++..+.++    +.+.+.+.- ...+.    .+....+.||+
T Consensus        43 l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~-~~~d~----~~~~~~~~fDl  115 (187)
T PRK00107         43 LPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTV-VHGRA----EEFGQEEKFDV  115 (187)
T ss_pred             cCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEE-EeccH----hhCCCCCCccE
Confidence            456899999997  3455555555544 679999999988766554    344432211 11111    11112347999


Q ss_pred             EEeCCCh---HHHHHhhccccCCCEEEEEe
Q 020487          212 ILDCMGA---SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       212 vi~~~g~---~~~~~~~~~l~~~g~~v~~g  238 (325)
                      |+.....   ..+..+.+.|++||+++.+-
T Consensus       116 V~~~~~~~~~~~l~~~~~~LkpGG~lv~~~  145 (187)
T PRK00107        116 VTSRAVASLSDLVELCLPLLKPGGRFLALK  145 (187)
T ss_pred             EEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence            9975432   23567789999999999873

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=95.98  E-value=0.051  Score=47.40  Aligned_cols=38  Identities=18%  Similarity=0.245  Sum_probs=32.4

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEecChhhH
Q 020487          139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSEEKL  177 (325)
Q Consensus       139 ~~~~vli~g~--~g~~G~~~~~~a~~~g~~v~~~~~~~~~~  177 (325)
                      .|.+++|+|+  ++++|.++++.+...|++|++ .+...++
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l   47 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL   47 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence            4889999999  799999999999999999998 5554443

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.98  E-value=0.034  Score=47.67  Aligned_cols=92  Identities=14%  Similarity=0.184  Sum_probs=58.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHH-cCCCEE-EeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVC-INYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      ++.+++|+|+ |+.+.+++..+...|+ +++++.|+.++.+.+.+ ++.... +....      ..+......+|++|+|
T Consensus       125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~------~~~~~~~~~~dliINa  197 (283)
T COG0169         125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA------LADLEGLEEADLLINA  197 (283)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc------ccccccccccCEEEEC
Confidence            5899999999 9999999999999996 89999999998776653 331110 00000      0000111148999999


Q ss_pred             CChHHHH------HhhccccCCCEEEEE
Q 020487          216 MGASYFQ------RNLGSLNIDGRLFII  237 (325)
Q Consensus       216 ~g~~~~~------~~~~~l~~~g~~v~~  237 (325)
                      ++...-.      ...+.+++.-.++++
T Consensus       198 Tp~Gm~~~~~~~~~~~~~l~~~~~v~D~  225 (283)
T COG0169         198 TPVGMAGPEGDSPVPAELLPKGAIVYDV  225 (283)
T ss_pred             CCCCCCCCCCCCCCcHHhcCcCCEEEEe
Confidence            8642211      003456666666665

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.97  E-value=0.078  Score=41.33  Aligned_cols=79  Identities=16%  Similarity=0.231  Sum_probs=52.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      -.|.+++|.|.+..+|.-++.++.+.|+.|+..-...+..                       .+.+  +..|+|+.++|
T Consensus        34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l-----------------------~~~~--~~ADIVVsa~G   88 (160)
T PF02882_consen   34 LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNL-----------------------QEIT--RRADIVVSAVG   88 (160)
T ss_dssp             TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSH-----------------------HHHH--TTSSEEEE-SS
T ss_pred             CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcc-----------------------ccee--eeccEEeeeec
Confidence            3689999999999999999999999999998876432222                       1122  25899999999


Q ss_pred             hHHHHHhhccccCCCEEEEEeccCC
Q 020487          218 ASYFQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       218 ~~~~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                      .+.+-. .++++++..++.+|....
T Consensus        89 ~~~~i~-~~~ik~gavVIDvG~~~~  112 (160)
T PF02882_consen   89 KPNLIK-ADWIKPGAVVIDVGINYV  112 (160)
T ss_dssp             STT-B--GGGS-TTEEEEE--CEEE
T ss_pred             cccccc-cccccCCcEEEecCCccc
Confidence            876522 468899999999887554

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.97  E-value=0.11  Score=42.42  Aligned_cols=79  Identities=20%  Similarity=0.257  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .|.+++|+|. |.+|..+++.+...|++|++.+++.++.+.+.+ +++. .++..         +.. ...+|+++.|..
T Consensus        27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~---------~l~-~~~~Dv~vp~A~   94 (200)
T cd01075          27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPE---------EIY-SVDADVFAPCAL   94 (200)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcch---------hhc-cccCCEEEeccc
Confidence            4789999998 899999999999999999999988887766654 4643 33321         111 125899997754


Q ss_pred             hHH-HHHhhcccc
Q 020487          218 ASY-FQRNLGSLN  229 (325)
Q Consensus       218 ~~~-~~~~~~~l~  229 (325)
                      ... ....++.|+
T Consensus        95 ~~~I~~~~~~~l~  107 (200)
T cd01075          95 GGVINDDTIPQLK  107 (200)
T ss_pred             ccccCHHHHHHcC
Confidence            432 234445554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=95.97  E-value=0.06  Score=45.24  Aligned_cols=78  Identities=23%  Similarity=0.355  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhHHHH----HHcCCCE-EE--eCCCchHH----HHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADV-CI--NYKTEDFV----ARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~~~~----~~~g~~~-~~--~~~~~~~~----~~~~~~~~~  206 (325)
                      .+.+++|+|++|.+|..++..+...|++|+++.+ ++++.+..    +..+... .+  |..+....    +.+.+..+ 
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   83 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG-   83 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC-
Confidence            3689999999999999999988889999987654 33333322    2233322 22  22222211    22222222 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       .+|.++.|.|.
T Consensus        84 -~id~vi~~ag~   94 (247)
T PRK12935         84 -KVDILVNNAGI   94 (247)
T ss_pred             -CCCEEEECCCC
Confidence             58999998874

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.96  E-value=0.065  Score=45.93  Aligned_cols=45  Identities=38%  Similarity=0.479  Sum_probs=40.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD  182 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~  182 (325)
                      +|...++|+|++.++|++++..++..|++|.++.++.+++..+++
T Consensus        31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~   75 (331)
T KOG1210|consen   31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKA   75 (331)
T ss_pred             CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHh
Confidence            455789999999999999999999999999999999999887763

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=95.95  E-value=0.047  Score=46.02  Aligned_cols=36  Identities=22%  Similarity=0.230  Sum_probs=32.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      .+.++||+|++|.+|..++..+...|++|+++.++.
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~   42 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF   42 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch
Confidence            468899999999999999999999999999999775

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=95.92  E-value=0.062  Score=47.20  Aligned_cols=79  Identities=19%  Similarity=0.308  Sum_probs=51.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHH-HcC---CC-EEE--eCCCchHHHHHHHHh--CCCcc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK-DLG---AD-VCI--NYKTEDFVARVKEET--GGKGV  209 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~-~~g---~~-~~~--~~~~~~~~~~~~~~~--~~~~~  209 (325)
                      +.+++|+|+++++|.+++..+...| ++|++++++.++.+.+. ++.   .. ..+  |-.+....+.+.+..  ...++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5689999999999999999888889 89999999887665443 332   11 122  333322222222211  12368


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |++|.+.|.
T Consensus        83 D~lI~nAG~   91 (314)
T TIGR01289        83 DALVCNAAV   91 (314)
T ss_pred             CEEEECCCc
Confidence            999998763

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08618 ornithine cyclodeaminase; Validated

Probab=95.92  E-value=0.1  Score=46.04  Aligned_cols=101  Identities=15%  Similarity=0.129  Sum_probs=66.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHH-HHCCC-EEEEEecChhhHHHHH-H----cCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMG-KCQGV-RVFVTAGSEEKLAVCK-D----LGADVCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a-~~~g~-~v~~~~~~~~~~~~~~-~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      ....+++|+|+ |..|...+..+ ...++ +|.+..++.++.+.+. .    ++.. +....+  .    .+..  ...|
T Consensus       125 ~~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~~--~----~~~~--~~aD  194 (325)
T PRK08618        125 EDAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVNS--A----DEAI--EEAD  194 (325)
T ss_pred             CCCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeCC--H----HHHH--hcCC
Confidence            45678999998 98987776554 45576 7888888888776543 2    2332 111111  1    2222  2689


Q ss_pred             EEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccch
Q 020487          211 VILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNI  249 (325)
Q Consensus       211 ~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~  249 (325)
                      +|+.|++.....-. +++++|-.+..+|.......+++.
T Consensus       195 iVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~p~~~E~~~  232 (325)
T PRK08618        195 IIVTVTNAKTPVFS-EKLKKGVHINAVGSFMPDMQELPS  232 (325)
T ss_pred             EEEEccCCCCcchH-HhcCCCcEEEecCCCCcccccCCH
Confidence            99999987553333 889999999999876654444554

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.92  E-value=0.076  Score=45.21  Aligned_cols=77  Identities=17%  Similarity=0.352  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEecC---hhhHHHH-HHcCCCEEE--eCCCchHH----HHHHHHhCC
Q 020487          139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGS---EEKLAVC-KDLGADVCI--NYKTEDFV----ARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~--~g~~G~~~~~~a~~~g~~v~~~~~~---~~~~~~~-~~~g~~~~~--~~~~~~~~----~~~~~~~~~  206 (325)
                      .+.+++|+|+  ++++|.++++.+...|++|+++.+.   +++.+.+ ++++....+  |-.+....    +.+.+..+ 
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g-   83 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD-   83 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC-
Confidence            4788999996  5799999999999899999987543   2333322 234432222  33332222    22222233 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       .+|+++++.|
T Consensus        84 -~iD~lvnnAG   93 (260)
T PRK06997         84 -GLDGLVHSIG   93 (260)
T ss_pred             -CCcEEEEccc
Confidence             6899999876

>PRK07102 short chain dehydrogenase; Provisional

Probab=95.92  E-value=0.059  Score=45.24  Aligned_cols=77  Identities=21%  Similarity=0.252  Sum_probs=49.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H---cCC-C-EEE--eCCCchHHHHHHHHhCCCcccEE
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LGA-D-VCI--NYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g~-~-~~~--~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      .+++|+|++|.+|..+++.+...|++|+++++++++.+... +   .+. . .++  |-.+......+.+... ..+|++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~v   80 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDIV   80 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCEE
Confidence            47999999999999999999999999999999887654332 1   111 1 122  2222222222222222 246999


Q ss_pred             EeCCCh
Q 020487          213 LDCMGA  218 (325)
Q Consensus       213 i~~~g~  218 (325)
                      +.+.|.
T Consensus        81 v~~ag~   86 (243)
T PRK07102         81 LIAVGT   86 (243)
T ss_pred             EECCcC
Confidence            987763

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.91  E-value=0.69  Score=39.68  Aligned_cols=95  Identities=17%  Similarity=0.192  Sum_probs=65.1

Q ss_pred             CcchHHHHHHHHHhhcCCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHH
Q 020487          120 FPEVACTVWSTVFMTSHLS-PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA  198 (325)
Q Consensus       120 l~~~~~~a~~~l~~~~~~~-~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  198 (325)
                      +|+........| +..+++ .|.+++|.|.+..+|.-++.++...|++|++.-...                   .+   
T Consensus       137 ~PcTp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t-------------------~~---  193 (285)
T PRK14191        137 VPATPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT-------------------KD---  193 (285)
T ss_pred             CCCcHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc-------------------HH---
Confidence            344433333333 443443 599999999977999999999999999998763211                   11   


Q ss_pred             HHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487          199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                       +.+.+  +.+|+++-++|.+.+.. -+++++|..++.+|...
T Consensus       194 -l~~~~--~~ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~~  232 (285)
T PRK14191        194 -LSFYT--QNADIVCVGVGKPDLIK-ASMVKKGAVVVDIGINR  232 (285)
T ss_pred             -HHHHH--HhCCEEEEecCCCCcCC-HHHcCCCcEEEEeeccc
Confidence             12222  25899999999876522 45789999999998643

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.90  E-value=0.29  Score=44.19  Aligned_cols=93  Identities=19%  Similarity=0.277  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHH-HHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAV-CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      .+.++|++|+ |-+|..++..+...|+ +|+++.|+.++... ++++|+..+.       .+++.....  .+|+||.++
T Consensus       177 ~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~-------l~el~~~l~--~~DvVissT  246 (414)
T COG0373         177 KDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVA-------LEELLEALA--EADVVISST  246 (414)
T ss_pred             ccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeec-------HHHHHHhhh--hCCEEEEec
Confidence            5788999999 9999999999999996 89999999887754 5678854332       233344443  689999998


Q ss_pred             ChHH--H--HHhhccccCCC--EEEEEeccC
Q 020487          217 GASY--F--QRNLGSLNIDG--RLFIIGTQG  241 (325)
Q Consensus       217 g~~~--~--~~~~~~l~~~g--~~v~~g~~~  241 (325)
                      +.+.  +  ....+.+++.-  -+++++.+-
T Consensus       247 sa~~~ii~~~~ve~a~~~r~~~livDiavPR  277 (414)
T COG0373         247 SAPHPIITREMVERALKIRKRLLIVDIAVPR  277 (414)
T ss_pred             CCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence            8753  1  23334444433  345665544

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.88  E-value=0.13  Score=36.21  Aligned_cols=85  Identities=18%  Similarity=0.194  Sum_probs=56.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC---CEEEEE-ecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQG---VRVFVT-AGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g---~~v~~~-~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      +|.++|+ |.+|.+++.-+...|   .+|+.+ .+++++.+.+. +++......    +..+.+ +     ..|++|-|+
T Consensus         1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~-~-----~advvilav   69 (96)
T PF03807_consen    1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD----DNEEAA-Q-----EADVVILAV   69 (96)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE----EHHHHH-H-----HTSEEEE-S
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC----ChHHhh-c-----cCCEEEEEE
Confidence            4778887 999999999999999   899955 89998887765 555432221    112222 1     479999999


Q ss_pred             ChHHHHHhhcc---ccCCCEEEEE
Q 020487          217 GASYFQRNLGS---LNIDGRLFII  237 (325)
Q Consensus       217 g~~~~~~~~~~---l~~~g~~v~~  237 (325)
                      ....+...++.   ..++..++++
T Consensus        70 ~p~~~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   70 KPQQLPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred             CHHHHHHHHHHHhhccCCCEEEEe
Confidence            98766555444   4455666655

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=95.87  E-value=0.039  Score=43.89  Aligned_cols=77  Identities=27%  Similarity=0.416  Sum_probs=52.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHH-HHHHcCC--CE-EEeCC--Cch----HHHHHHHHhCCCcc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-VCKDLGA--DV-CINYK--TED----FVARVKEETGGKGV  209 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~~g~--~~-~~~~~--~~~----~~~~~~~~~~~~~~  209 (325)
                      ....+|+|+++++|.+..+.+...|++|.+.+...+..+ .++.++.  ++ .+..+  ...    ..+++.+..|  ..
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g--~p   91 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLG--TP   91 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcC--CC
Confidence            456789999999999999999999999999997766443 4456664  22 22222  111    1223333344  68


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      +++++|.|.
T Consensus        92 svlVncAGI  100 (256)
T KOG1200|consen   92 SVLVNCAGI  100 (256)
T ss_pred             cEEEEcCcc
Confidence            999999985

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.87  E-value=0.054  Score=45.39  Aligned_cols=77  Identities=25%  Similarity=0.446  Sum_probs=49.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecChhhHHHHH----HcCCC-EEE--eCCCchHHH----HHHHHhCCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVCK----DLGAD-VCI--NYKTEDFVA----RVKEETGGK  207 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~-~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~----~~~~~~~~~  207 (325)
                      +.+++|+|++|.+|..++..+...|++|+++ .++.++.+...    ..+.. .++  |..+.....    .+.+..+  
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--   82 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG--   82 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC--
Confidence            5689999999999999999888889999998 87766554332    22222 122  222222111    2222222  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|.+|.+.|.
T Consensus        83 ~id~vi~~ag~   93 (247)
T PRK05565         83 KIDILVNNAGI   93 (247)
T ss_pred             CCCEEEECCCc
Confidence            58999998863

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=95.86  E-value=0.12  Score=43.35  Aligned_cols=101  Identities=14%  Similarity=0.114  Sum_probs=64.1

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHH----HcCCCEEEeCCCchHHHHHHHHhC--
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETG--  205 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~--  205 (325)
                      ..+..+.+++|-.|.  ..|..++.+++.+  +.+|+.++.+++..+.++    +.|...-+.....+..+.+.+...  
T Consensus        63 l~~~~~~~~vLEiGt--~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~~~  140 (234)
T PLN02781         63 LVKIMNAKNTLEIGV--FTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLNND  140 (234)
T ss_pred             HHHHhCCCEEEEecC--cccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHhCC
Confidence            445567889999984  5677777777766  359999999988776665    344322111112222333333321  


Q ss_pred             -CCcccEEEeCCCh----HHHHHhhccccCCCEEEE
Q 020487          206 -GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFI  236 (325)
Q Consensus       206 -~~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~  236 (325)
                       .+.||+||--...    ..+..+++.+++||.++.
T Consensus       141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~  176 (234)
T PLN02781        141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAF  176 (234)
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence             3479999865543    235677889999998775

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=95.82  E-value=0.069  Score=45.37  Aligned_cols=35  Identities=29%  Similarity=0.475  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      .+++++|+|+++++|.+++..+...|++|+++.++
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~   41 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNS   41 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence            47899999999999999999999999999888643

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.82  E-value=0.075  Score=44.48  Aligned_cols=37  Identities=30%  Similarity=0.327  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      +..++||+|++|.+|..++..+...|++|+++.++..
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~   41 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDE   41 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCH
Confidence            3568999999999999999999999999888666544

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=95.80  E-value=0.065  Score=52.29  Aligned_cols=112  Identities=21%  Similarity=0.304  Sum_probs=68.2

Q ss_pred             eeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487           94 YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus        94 ~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      ..+|..+++...+.+ +..+++++=.-..+          ...--.+.+++|+|++|.+|.++++.+...|++|++++++
T Consensus       379 ~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~  447 (676)
T TIGR02632       379 VSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLN  447 (676)
T ss_pred             ccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence            456767777777766 55555555210000          0011237899999999999999999999999999999988


Q ss_pred             hhhHHHHH-H----cCCCE--EE--eCCCchHHHH----HHHHhCCCcccEEEeCCCh
Q 020487          174 EEKLAVCK-D----LGADV--CI--NYKTEDFVAR----VKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       174 ~~~~~~~~-~----~g~~~--~~--~~~~~~~~~~----~~~~~~~~~~d~vi~~~g~  218 (325)
                      .++.+... +    .+...  .+  |-.+......    +.+..+  ++|+++.+.|.
T Consensus       448 ~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g--~iDilV~nAG~  503 (676)
T TIGR02632       448 LEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG--GVDIVVNNAGI  503 (676)
T ss_pred             HHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC--CCcEEEECCCC
Confidence            77654432 2    23211  22  2222222222    222222  68999999874

>PRK12746 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.077  Score=44.80  Aligned_cols=38  Identities=26%  Similarity=0.313  Sum_probs=32.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecChhhH
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKL  177 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~-~~~~~~~  177 (325)
                      +.+++|+|++|.+|..+++.+...|++|++. .++.++.
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~   44 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAA   44 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence            5789999999999999999998899998775 5666544

>PLN02214 cinnamoyl-CoA reductase

Probab=95.78  E-value=0.077  Score=47.21  Aligned_cols=78  Identities=15%  Similarity=0.230  Sum_probs=50.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHH--HHHHcC---CC-EEEeCCCchHHHHHHHHhCCCcccE
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA--VCKDLG---AD-VCINYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~--~~~~~g---~~-~~~~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      .++.+++|+|++|.+|..++..+...|++|++++++.++..  ..+.+.   .. ..+..+-.+ ...+.+...  ++|+
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~--~~d~   84 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQD-YEALKAAID--GCDG   84 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCC-hHHHHHHHh--cCCE
Confidence            34678999999999999999999999999999998765321  122221   11 122222111 223333333  5899


Q ss_pred             EEeCCCh
Q 020487          212 ILDCMGA  218 (325)
Q Consensus       212 vi~~~g~  218 (325)
                      ||.+++.
T Consensus        85 Vih~A~~   91 (342)
T PLN02214         85 VFHTASP   91 (342)
T ss_pred             EEEecCC
Confidence            9999863

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=95.77  E-value=0.035  Score=49.26  Aligned_cols=37  Identities=16%  Similarity=0.218  Sum_probs=32.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      ++.++||+|++|.+|..+++.+...|++|+++.+...
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~   41 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS   41 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence            3678999999999999999999999999999887543

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=95.77  E-value=0.082  Score=44.92  Aligned_cols=36  Identities=22%  Similarity=0.370  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      .+.+++|+|+++.+|..+++.+...|++|+++.++.
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~   41 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSD   41 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCC
Confidence            478999999999999999999999999999887754

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.76  E-value=0.095  Score=47.50  Aligned_cols=90  Identities=20%  Similarity=0.306  Sum_probs=58.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHCC-C-EEEEEecChhhHHHHHH--cCCC-EEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQG-V-RVFVTAGSEEKLAVCKD--LGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g-~-~v~~~~~~~~~~~~~~~--~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      |+|+|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+  .+.. .....+..+ ...+.+...  +.|+|++|+|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~--~~dvVin~~g   76 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-PESLAELLR--GCDVVINCAG   76 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-HHHHHHHHT--TSSEEEE-SS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-HHHHHHHHh--cCCEEEECCc
Confidence            689999 999999999998775 4 89999999999776653  2222 222222222 233566654  5699999999


Q ss_pred             hHHHH-HhhccccCCCEEEE
Q 020487          218 ASYFQ-RNLGSLNIDGRLFI  236 (325)
Q Consensus       218 ~~~~~-~~~~~l~~~g~~v~  236 (325)
                      ..... -+-.|+..+-.+++
T Consensus        77 p~~~~~v~~~~i~~g~~yvD   96 (386)
T PF03435_consen   77 PFFGEPVARACIEAGVHYVD   96 (386)
T ss_dssp             GGGHHHHHHHHHHHT-EEEE
T ss_pred             cchhHHHHHHHHHhCCCeec
Confidence            76433 33456777778887

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.74  E-value=0.099  Score=44.74  Aligned_cols=95  Identities=14%  Similarity=0.119  Sum_probs=66.3

Q ss_pred             CcchHHHHHHHHHhhcCCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHH
Q 020487          120 FPEVACTVWSTVFMTSHLS-PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA  198 (325)
Q Consensus       120 l~~~~~~a~~~l~~~~~~~-~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  198 (325)
                      .|+........| +..++. .|.+++|+|-+..+|.-+++++...|++|++.-...                   .+   
T Consensus       139 ~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T-------------------~~---  195 (285)
T PRK10792        139 RPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT-------------------KN---  195 (285)
T ss_pred             CCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC-------------------CC---
Confidence            344433444334 443432 589999999988899999999999999998876331                   11   


Q ss_pred             HHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487          199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                       +.+.+  +.+|+++.++|.+.+-. -++++++..++.+|...
T Consensus       196 -l~~~~--~~ADIvi~avG~p~~v~-~~~vk~gavVIDvGin~  234 (285)
T PRK10792        196 -LRHHV--RNADLLVVAVGKPGFIP-GEWIKPGAIVIDVGINR  234 (285)
T ss_pred             -HHHHH--hhCCEEEEcCCCccccc-HHHcCCCcEEEEccccc
Confidence             22222  26899999999876422 37889999999998543

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.73  E-value=0.11  Score=39.51  Aligned_cols=77  Identities=14%  Similarity=0.098  Sum_probs=58.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.++.|+|.+..+|.-++.++...|++|+.........                       .+..  +..|+++.++|.
T Consensus        27 ~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l-----------------------~~~v--~~ADIVvsAtg~   81 (140)
T cd05212          27 DGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQL-----------------------QSKV--HDADVVVVGSPK   81 (140)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCH-----------------------HHHH--hhCCEEEEecCC
Confidence            589999999999999999999999999999887432211                       1111  258999999998


Q ss_pred             HHHHHhhccccCCCEEEEEeccC
Q 020487          219 SYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       219 ~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      ..+ ---+++++|..++.+|...
T Consensus        82 ~~~-i~~~~ikpGa~Vidvg~~~  103 (140)
T cd05212          82 PEK-VPTEWIKPGATVINCSPTK  103 (140)
T ss_pred             CCc-cCHHHcCCCCEEEEcCCCc
Confidence            743 2246899999999887544

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.72  E-value=0.085  Score=45.19  Aligned_cols=77  Identities=17%  Similarity=0.238  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+++|.|.+..+|.-++.++...|++|++.-..                   ..+.    .+.+  +..|+++-++|.
T Consensus       157 ~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~-------------------t~~l----~~~~--~~ADIVV~avG~  211 (285)
T PRK14189        157 RGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK-------------------TRDL----AAHT--RQADIVVAAVGK  211 (285)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC-------------------CCCH----HHHh--hhCCEEEEcCCC
Confidence            58999999998888999999999999999875321                   1122    2222  258999999998


Q ss_pred             HHHHHhhccccCCCEEEEEeccC
Q 020487          219 SYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       219 ~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      +.+-. -++++++..++.+|...
T Consensus       212 ~~~i~-~~~ik~gavVIDVGin~  233 (285)
T PRK14189        212 RNVLT-ADMVKPGATVIDVGMNR  233 (285)
T ss_pred             cCccC-HHHcCCCCEEEEccccc
Confidence            76422 37899999999998654

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.70  E-value=0.071  Score=39.84  Aligned_cols=87  Identities=13%  Similarity=0.128  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~-~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      +.-+|.|+|+ |.+|..+...++..|..|..+. ++.+..+.+.. ++...+.+..+         ..  ..+|++|-++
T Consensus         9 ~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~---------~~--~~aDlv~iav   76 (127)
T PF10727_consen    9 ARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE---------IL--RDADLVFIAV   76 (127)
T ss_dssp             ---EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG---------GG--CC-SEEEE-S
T ss_pred             CccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc---------cc--ccCCEEEEEe
Confidence            3467999998 9999999999999999998875 44445555543 44433332211         11  2689999999


Q ss_pred             ChHHHHHhhccccCC-----CEEEEE
Q 020487          217 GASYFQRNLGSLNID-----GRLFII  237 (325)
Q Consensus       217 g~~~~~~~~~~l~~~-----g~~v~~  237 (325)
                      .++.+....+.|...     |++|.-
T Consensus        77 pDdaI~~va~~La~~~~~~~g~iVvH  102 (127)
T PF10727_consen   77 PDDAIAEVAEQLAQYGAWRPGQIVVH  102 (127)
T ss_dssp             -CCHHHHHHHHHHCC--S-TT-EEEE
T ss_pred             chHHHHHHHHHHHHhccCCCCcEEEE
Confidence            998877776666543     555543

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK05855 short chain dehydrogenase; Validated

Probab=95.70  E-value=0.066  Score=51.18  Aligned_cols=80  Identities=20%  Similarity=0.202  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHHHHHHHh--CCCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVARVKEET--GGKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~~~~~~~--~~~~~  209 (325)
                      .+.+++|+|++|.+|..+++.+...|++|+++.++.++.+.+.    ..|.. ..+  |-.+......+.+..  ....+
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999999999999999999999999999999887665432    23432 222  323322222222211  11268


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |++++++|.
T Consensus       394 d~lv~~Ag~  402 (582)
T PRK05855        394 DIVVNNAGI  402 (582)
T ss_pred             cEEEECCcc
Confidence            999999874

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=95.70  E-value=0.076  Score=46.77  Aligned_cols=77  Identities=16%  Similarity=0.195  Sum_probs=49.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH---Hc-CC---CEEEeCCCchHHHHHHHHhCCCccc
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK---DL-GA---DVCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~---~~-g~---~~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      ..+.++||+|++|.+|..++..+...|++|++++++..+.....   .. +.   -..+..+-.+ ...+.+...  ++|
T Consensus         3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~--~~d   79 (325)
T PLN02989          3 DGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLD-EGSFELAID--GCE   79 (325)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCC-chHHHHHHc--CCC
Confidence            34789999999999999999999999999998887765433221   11 11   1222222111 122333332  589


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      +++.+++
T Consensus        80 ~vih~A~   86 (325)
T PLN02989         80 TVFHTAS   86 (325)
T ss_pred             EEEEeCC
Confidence            9999886

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=95.69  E-value=0.11  Score=46.34  Aligned_cols=77  Identities=17%  Similarity=0.224  Sum_probs=50.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc--CCC-EEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--GAD-VCINYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                      ..+.+|||+|++|.+|..+++.+...|++|+++.++..+...+. .+  +.. .++..+-.+ ...+.+...  ++|.||
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~--~~d~Vi   84 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQE-EGSFDEAVK--GCDGVF   84 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCC-HHHHHHHHc--CCCEEE
Confidence            34678999999999999999999999999999988766544332 22  111 122222222 223334333  589999


Q ss_pred             eCCC
Q 020487          214 DCMG  217 (325)
Q Consensus       214 ~~~g  217 (325)
                      .+++
T Consensus        85 h~A~   88 (353)
T PLN02896         85 HVAA   88 (353)
T ss_pred             ECCc
Confidence            8876

>PLN00016 RNA-binding protein; Provisional

Probab=95.69  E-value=0.048  Score=49.28  Aligned_cols=95  Identities=18%  Similarity=0.197  Sum_probs=60.9

Q ss_pred             CCEEEEE----cCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH-----------HHcCCCEEEeCCCchHHHHHHHHh
Q 020487          140 GESFLVH----GGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-----------KDLGADVCINYKTEDFVARVKEET  204 (325)
Q Consensus       140 ~~~vli~----g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-----------~~~g~~~~~~~~~~~~~~~~~~~~  204 (325)
                      ..+|||+    |++|-+|..++..+...|.+|++++++.......           ...+...+ ..+..    ++.+..
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v-~~D~~----d~~~~~  126 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTV-WGDPA----DVKSKV  126 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEE-EecHH----HHHhhh
Confidence            4679999    9999999999999999999999999886543211           12233322 11111    133333


Q ss_pred             CCCcccEEEeCCChH--HHHHhhccccCC--CEEEEEec
Q 020487          205 GGKGVDVILDCMGAS--YFQRNLGSLNID--GRLFIIGT  239 (325)
Q Consensus       205 ~~~~~d~vi~~~g~~--~~~~~~~~l~~~--g~~v~~g~  239 (325)
                      ...++|+|+++.+..  ....+++.++..  .++|.++.
T Consensus       127 ~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS  165 (378)
T PLN00016        127 AGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS  165 (378)
T ss_pred             ccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            345799999998743  234555555433  37877654

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=95.68  E-value=0.037  Score=46.05  Aligned_cols=73  Identities=16%  Similarity=0.257  Sum_probs=50.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCE-EEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV-CINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      |||+|++|-+|..++..+...|..|+.+.+.......... ..... ..|..+......+.+.   ..+|.||.+++.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~---~~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEK---ANIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHH---HTESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccc---cCceEEEEeecc
Confidence            7999999999999999999999999988877776654443 22221 2244443333333332   268999998874

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK09135 pteridine reductase; Provisional

Probab=95.68  E-value=0.092  Score=44.05  Aligned_cols=36  Identities=22%  Similarity=0.315  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~   40 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRS   40 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence            457899999999999999999998999999999753

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=95.66  E-value=0.12  Score=44.62  Aligned_cols=87  Identities=14%  Similarity=0.081  Sum_probs=58.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF  221 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~  221 (325)
                      +|.|+|. |.+|...+..++..|.+|++.+++++..+.+.+.|.....   ....     +..  ...|+||-|+.....
T Consensus         2 ~I~IIG~-G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~---~~~~-----~~~--~~aDlVilavp~~~~   70 (279)
T PRK07417          2 KIGIVGL-GLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEA---STDL-----SLL--KDCDLVILALPIGLL   70 (279)
T ss_pred             eEEEEee-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccc---cCCH-----hHh--cCCCEEEEcCCHHHH
Confidence            5889997 9999999998888899999999998888888776642111   1111     111  257999999987553


Q ss_pred             H----HhhccccCCCEEEEEec
Q 020487          222 Q----RNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       222 ~----~~~~~l~~~g~~v~~g~  239 (325)
                      .    .+...++++..+..+++
T Consensus        71 ~~~~~~l~~~l~~~~ii~d~~S   92 (279)
T PRK07417         71 LPPSEQLIPALPPEAIVTDVGS   92 (279)
T ss_pred             HHHHHHHHHhCCCCcEEEeCcc
Confidence            3    33344455544444443

>TIGR02415 23BDH acetoin reductases

Probab=95.66  E-value=0.078  Score=44.74  Aligned_cols=75  Identities=28%  Similarity=0.360  Sum_probs=49.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCE-EE--eCCCchHHHH----HHHHhCCCccc
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-CI--NYKTEDFVAR----VKEETGGKGVD  210 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~~~~~~----~~~~~~~~~~d  210 (325)
                      +++|+|++|.+|..+++.+...|++|+++.++.++.+..    +..+... .+  |-.+......    +.+..+  .+|
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~--~id   79 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFG--GFD   79 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC--CCC
Confidence            689999999999999999999999999999887655433    2233221 22  3233222222    222222  589


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      +++.+.|.
T Consensus        80 ~vi~~ag~   87 (254)
T TIGR02415        80 VMVNNAGV   87 (254)
T ss_pred             EEEECCCc
Confidence            99998864

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.64  E-value=0.037  Score=45.00  Aligned_cols=95  Identities=16%  Similarity=0.073  Sum_probs=58.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCCEEEeCCCchHHHHHHHHhCCCcccE
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      ...++.+||-.|+  +.|..+..+++. |.+|++++.++...+.+++    .+...+. ....+    +.+..-...||+
T Consensus        27 ~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~-~~~~d----~~~~~~~~~fD~   98 (197)
T PRK11207         27 KVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNLH-TAVVD----LNNLTFDGEYDF   98 (197)
T ss_pred             ccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcce-EEecC----hhhCCcCCCcCE
Confidence            4456788999997  347777777775 8899999999887666553    2222111 00111    111111236999


Q ss_pred             EEeCCCh---------HHHHHhhccccCCCEEEEEe
Q 020487          212 ILDCMGA---------SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       212 vi~~~g~---------~~~~~~~~~l~~~g~~v~~g  238 (325)
                      |+.+..-         ..+..+.+.|+|||.++.+.
T Consensus        99 I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207         99 ILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             EEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            9876431         22567778899999965543

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.64  E-value=0.11  Score=43.21  Aligned_cols=79  Identities=18%  Similarity=0.225  Sum_probs=58.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH--cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD--LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      +++|.|+ |.+|..+++.+...|.+|+++.+++++......  +.. +++..+..+ . ...+..|-..+|.++.+.|.+
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~t~-~-~~L~~agi~~aD~vva~t~~d   77 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDT-HVVIGDATD-E-DVLEEAGIDDADAVVAATGND   77 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcce-EEEEecCCC-H-HHHHhcCCCcCCEEEEeeCCC
Confidence            5889998 999999999999999999999999998877433  544 344333332 2 334445666899999999986


Q ss_pred             HHHHh
Q 020487          220 YFQRN  224 (325)
Q Consensus       220 ~~~~~  224 (325)
                      ..+..
T Consensus        78 ~~N~i   82 (225)
T COG0569          78 EVNSV   82 (225)
T ss_pred             HHHHH
Confidence            54433

>PRK12827 short chain dehydrogenase; Provisional

Probab=95.61  E-value=0.1  Score=43.70  Aligned_cols=33  Identities=27%  Similarity=0.372  Sum_probs=29.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG  172 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~  172 (325)
                      +.+++|+|++|.+|..++..+...|++|+++.+
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~   38 (249)
T PRK12827          6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDI   38 (249)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence            578999999999999999999999999988664

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=95.60  E-value=0.097  Score=40.56  Aligned_cols=94  Identities=16%  Similarity=0.144  Sum_probs=59.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHH-HHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVC-KDLGADVCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .++.+++|+|+ |.+|...++.+...| .+|++..++.++.+.+ ++++... +.....+.    .+.  -+++|+++.|
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~~~~----~~~--~~~~Dvvi~~   88 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAYLDL----EEL--LAEADLIINT   88 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceeecch----hhc--cccCCEEEeC
Confidence            44688999998 999999999998886 6899999888776554 3444321 00001111    111  1368999999


Q ss_pred             CChHHH-----HHhhccccCCCEEEEEec
Q 020487          216 MGASYF-----QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       216 ~g~~~~-----~~~~~~l~~~g~~v~~g~  239 (325)
                      ++....     ......++++..++.++.
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~v~D~~~  117 (155)
T cd01065          89 TPVGMKPGDELPLPPSLLKPGGVVYDVVY  117 (155)
T ss_pred             cCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence            886542     111234566777777643

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PLN02244 tocopherol O-methyltransferase

Probab=95.60  E-value=0.028  Score=49.89  Aligned_cols=94  Identities=15%  Similarity=0.093  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHHhCCCccc
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      +++++||=+|+  +.|..+..+++..|++|+.++.++...+.+++    .+..   .+...+....      -...+.||
T Consensus       117 ~~~~~VLDiGC--G~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~------~~~~~~FD  188 (340)
T PLN02244        117 KRPKRIVDVGC--GIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQ------PFEDGQFD  188 (340)
T ss_pred             CCCCeEEEecC--CCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccC------CCCCCCcc
Confidence            67889999986  45777888888889999999999887766543    2321   1222111110      01234799


Q ss_pred             EEEeCCCh-------HHHHHhhccccCCCEEEEEec
Q 020487          211 VILDCMGA-------SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       211 ~vi~~~g~-------~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      +|+.....       ..+..+.+.|+|||+++....
T Consensus       189 ~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        189 LVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             EEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            99865432       235777899999999988643

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.59  E-value=0.075  Score=44.89  Aligned_cols=76  Identities=20%  Similarity=0.330  Sum_probs=48.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh-hHH----HHHHcCCC-EEE--eCCCchHHH----HHHHHhCCCc
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLA----VCKDLGAD-VCI--NYKTEDFVA----RVKEETGGKG  208 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~-~~~----~~~~~g~~-~~~--~~~~~~~~~----~~~~~~~~~~  208 (325)
                      .+++|+|++|.+|..++..+...|++|++++++.. ..+    .++..+.. ..+  |..+.....    .+.+..+  .
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~   80 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG--R   80 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC--C
Confidence            57999999999999999999999999999987543 221    22223322 222  333322222    2222223  5


Q ss_pred             ccEEEeCCCh
Q 020487          209 VDVILDCMGA  218 (325)
Q Consensus       209 ~d~vi~~~g~  218 (325)
                      +|+++.|.|.
T Consensus        81 id~vi~~ag~   90 (256)
T PRK12745         81 IDCLVNNAGV   90 (256)
T ss_pred             CCEEEECCcc
Confidence            8999999863

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=95.58  E-value=0.11  Score=45.88  Aligned_cols=76  Identities=18%  Similarity=0.188  Sum_probs=48.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHH-HcCC-C-EEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK-DLGA-D-VCINYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~-~~g~-~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      +.++||+|++|.+|..+++.+...|  .+|++++++..+...+. .+.. . ..+..+-.+ ...+.+...  ++|++|.
T Consensus         4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d-~~~l~~~~~--~iD~Vih   80 (324)
T TIGR03589         4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRD-KERLTRALR--GVDYVVH   80 (324)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHh--cCCEEEE
Confidence            6789999999999999998887765  68998887765543332 2221 1 222222222 233444443  5899999


Q ss_pred             CCCh
Q 020487          215 CMGA  218 (325)
Q Consensus       215 ~~g~  218 (325)
                      +++.
T Consensus        81 ~Ag~   84 (324)
T TIGR03589        81 AAAL   84 (324)
T ss_pred             Cccc
Confidence            8863

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN03075 nicotianamine synthase; Provisional

Probab=95.58  E-value=0.097  Score=45.10  Aligned_cols=95  Identities=13%  Similarity=0.050  Sum_probs=63.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHHcC-----CCEEEeCCCchHHHHHHHHh-CCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLG-----ADVCINYKTEDFVARVKEET-GGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~-~~~~~d  210 (325)
                      +.++|+-+|+ |+.++.++.+++.+  +.+++.++.+++..+.+++.-     ...-+.....+.    .+.. ....||
T Consensus       123 ~p~~VldIGc-Gpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da----~~~~~~l~~FD  197 (296)
T PLN03075        123 VPTKVAFVGS-GPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADV----MDVTESLKEYD  197 (296)
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECch----hhcccccCCcC
Confidence            7789999997 88898888888665  458999999999887776532     111111111111    1111 124799


Q ss_pred             EEEeCC------Ch--HHHHHhhccccCCCEEEEEe
Q 020487          211 VILDCM------GA--SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       211 ~vi~~~------g~--~~~~~~~~~l~~~g~~v~~g  238 (325)
                      +||-.+      ..  ..+..+.+.|+|||.++.-.
T Consensus       198 lVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        198 VVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             EEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            998775      12  23678889999999998764

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.58  E-value=0.2  Score=42.85  Aligned_cols=89  Identities=17%  Similarity=0.225  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+++|.|.+..+|.-++.++...|++|++.-..                   ..+.    .+.+  +.+|+++-++|.
T Consensus       158 ~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~-------------------T~~l----~~~~--~~ADIvIsAvGk  212 (284)
T PRK14177        158 TGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSK-------------------TQNL----PSIV--RQADIIVGAVGK  212 (284)
T ss_pred             CCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC-------------------CCCH----HHHH--hhCCEEEEeCCC
Confidence            58999999999999999999999999999876522                   1121    2222  258999999998


Q ss_pred             HHHHHhhccccCCCEEEEEeccCCcccccchHHHH
Q 020487          219 SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLF  253 (325)
Q Consensus       219 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~  253 (325)
                      +.+-. -+++++|..++++|.......+.++....
T Consensus       213 ~~~i~-~~~ik~gavVIDvGin~~~~GDVd~~~v~  246 (284)
T PRK14177        213 PEFIK-ADWISEGAVLLDAGYNPGNVGDIEISKAK  246 (284)
T ss_pred             cCccC-HHHcCCCCEEEEecCcccccCCcCHHHHh
Confidence            77522 57899999999998754222344444433

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=95.58  E-value=0.14  Score=45.77  Aligned_cols=79  Identities=20%  Similarity=0.213  Sum_probs=50.0

Q ss_pred             CCCCEEEEEcCCchHHHH--HHHHHHHCCCEEEEEecChh--h--------------HHHHHHcCCC-EEEeCCCc--h-
Q 020487          138 SPGESFLVHGGSSGIGTF--AIQMGKCQGVRVFVTAGSEE--K--------------LAVCKDLGAD-VCINYKTE--D-  195 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~--~~~~a~~~g~~v~~~~~~~~--~--------------~~~~~~~g~~-~~~~~~~~--~-  195 (325)
                      ..+.++||+|+++.+|++  +++.+ ..|++++++....+  +              .+.+++.|.. ..+..+..  . 
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            446899999999999999  56666 88999888873221  1              1233455643 23333332  2 


Q ss_pred             ---HHHHHHHHhCCCcccEEEeCCChH
Q 020487          196 ---FVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       196 ---~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                         ..+.+.+..|  ++|+++++++.+
T Consensus       118 v~~lie~I~e~~G--~IDiLVnSaA~~  142 (398)
T PRK13656        118 KQKVIELIKQDLG--QVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHhcC--CCCEEEECCccC
Confidence               2333444443  699999998864

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=95.58  E-value=0.14  Score=43.40  Aligned_cols=95  Identities=14%  Similarity=0.153  Sum_probs=65.6

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccE
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      ......++.+||=+|+  +.|..+..+++.. +.+|+.++.++...+.+++.+.+.+ ..+.       .+......||+
T Consensus        23 ~~l~~~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~-~~d~-------~~~~~~~~fD~   92 (255)
T PRK14103         23 ARVGAERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDAR-TGDV-------RDWKPKPDTDV   92 (255)
T ss_pred             HhCCCCCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcEE-EcCh-------hhCCCCCCceE
Confidence            4456678899999997  3377777787775 6799999999888887776554332 2111       11222347999


Q ss_pred             EEeCCCh-------HHHHHhhccccCCCEEEEE
Q 020487          212 ILDCMGA-------SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       212 vi~~~g~-------~~~~~~~~~l~~~g~~v~~  237 (325)
                      |+....-       ..+..+.+.|+|||+++..
T Consensus        93 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         93 VVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             EEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            9875531       2356778899999999865

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.58  E-value=0.079  Score=44.14  Aligned_cols=72  Identities=19%  Similarity=0.286  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC-EEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .+.+++|+|+++.+|..++..+...|++|+++.++....     .... ..+..+..+..+.+.+..+  ++|+++.+.|
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~--~id~lv~~ag   76 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-----LSGNFHFLQLDLSDDLEPLFDWVP--SVDILCNTAG   76 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-----cCCcEEEEECChHHHHHHHHHhhC--CCCEEEECCC
Confidence            357899999999999999999988899999998765332     1111 1222222222233334333  6899999887

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.57  E-value=0.11  Score=43.81  Aligned_cols=77  Identities=25%  Similarity=0.387  Sum_probs=47.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhHHHHH-HcCCC-EEE--eCCCchH----HHHHHHHhCCCccc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCK-DLGAD-VCI--NYKTEDF----VARVKEETGGKGVD  210 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~~~~~-~~g~~-~~~--~~~~~~~----~~~~~~~~~~~~~d  210 (325)
                      +.+++|+|++|.+|..++..+...|++|+++.+ +..+.+.+. .++.. ..+  |..+...    .+.+.+..+ .++|
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~~id   83 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFG-KPIT   83 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhC-CCCe
Confidence            568999999999999999999999999988764 333333332 33322 122  2222221    222222233 2489


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      +++.+.|
T Consensus        84 ~li~~ag   90 (253)
T PRK08642         84 TVVNNAL   90 (253)
T ss_pred             EEEECCC
Confidence            9999875

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.57  E-value=0.16  Score=44.88  Aligned_cols=96  Identities=17%  Similarity=0.056  Sum_probs=65.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEE-EeCC---C-chHHHHHHHHhCCCcccEEEeC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYK---T-EDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~---~-~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .+|.|+|+ |.+|.+.+..+...|.+|++..+++++.+.+...+.+.. ++..   . ........+..  +..|+|+-|
T Consensus         5 m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~--~~aD~Vi~~   81 (328)
T PRK14618          5 MRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL--AGADFAVVA   81 (328)
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH--cCCCEEEEE
Confidence            47999998 999999999998889999999998887776664321100 0000   0 00001112222  258999999


Q ss_pred             CChHHHHHhhccccCCCEEEEEec
Q 020487          216 MGASYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       216 ~g~~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      +....+..+++.++++-.++++..
T Consensus        82 v~~~~~~~v~~~l~~~~~vi~~~~  105 (328)
T PRK14618         82 VPSKALRETLAGLPRALGYVSCAK  105 (328)
T ss_pred             CchHHHHHHHHhcCcCCEEEEEee
Confidence            998888888888888777776643

>PRK09134 short chain dehydrogenase; Provisional

Probab=95.56  E-value=0.11  Score=44.00  Aligned_cols=77  Identities=18%  Similarity=0.256  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-hhhHHHH----HHcCCCE-EE--eCCCchHHH----HHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVC----KDLGADV-CI--NYKTEDFVA----RVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~-~~~~~~~----~~~g~~~-~~--~~~~~~~~~----~~~~~~~~  206 (325)
                      .+.+++|+|++|.+|..+++.+...|++|+++.+. .++.+.+    +..+... .+  |..+.....    .+.+..+ 
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~-   86 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG-   86 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence            35689999999999999999998999999887654 3333222    2223321 22  322222222    2222222 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|++|.|.|
T Consensus        87 -~iD~vi~~ag   96 (258)
T PRK09134         87 -PITLLVNNAS   96 (258)
T ss_pred             -CCCEEEECCc
Confidence             6899999987

>PRK07023 short chain dehydrogenase; Provisional

Probab=95.55  E-value=0.063  Score=45.05  Aligned_cols=35  Identities=26%  Similarity=0.283  Sum_probs=31.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK  176 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~  176 (325)
                      +++|+|++|.+|..+++.+...|++|++++++..+
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~   37 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP   37 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch
Confidence            68999999999999999998899999999887553

>PRK14967 putative methyltransferase; Provisional

Probab=95.55  E-value=0.31  Score=40.48  Aligned_cols=94  Identities=17%  Similarity=0.196  Sum_probs=60.9

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHH----cCCC-EEEeCCCchHHHHHHHHhCCC
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      ...+++++++|-.|+ |. |..+..+++. ++ +|++++.++...+.+++    .+.. .++..+   +..    .....
T Consensus        31 ~~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d---~~~----~~~~~  100 (223)
T PRK14967         31 AEGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGD---WAR----AVEFR  100 (223)
T ss_pred             hcccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECc---hhh----hccCC
Confidence            345678899999997 54 8888887765 66 99999999887765542    3332 222221   111    12234


Q ss_pred             cccEEEeCCCh----------------------------HHHHHhhccccCCCEEEEE
Q 020487          208 GVDVILDCMGA----------------------------SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       208 ~~d~vi~~~g~----------------------------~~~~~~~~~l~~~g~~v~~  237 (325)
                      .||+|+...+-                            ..+..+.+.|+++|+++.+
T Consensus       101 ~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~  158 (223)
T PRK14967        101 PFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV  158 (223)
T ss_pred             CeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            79999875310                            1134567889999999876

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=95.55  E-value=0.07  Score=47.46  Aligned_cols=35  Identities=14%  Similarity=0.122  Sum_probs=31.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      +++||+|++|.+|..+++.+...|.+|++++++..
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~   35 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS   35 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence            37999999999999999999999999999987653

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=95.54  E-value=0.03  Score=43.27  Aligned_cols=90  Identities=16%  Similarity=0.144  Sum_probs=57.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeC-------C-CchHHHHHHHHhCCCcccEEEe
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-------K-TEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-------~-~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      |+|.|+ |++|...+..++..|.+|..+.+.+ +.+..++.|.......       . .....     ......+|++|-
T Consensus         1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~D~viv   73 (151)
T PF02558_consen    1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP-----SADAGPYDLVIV   73 (151)
T ss_dssp             EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH-----GHHHSTESEEEE
T ss_pred             CEEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc-----hhccCCCcEEEE
Confidence            689998 9999999999988999999999888 7776765443211110       0 00001     011237999999


Q ss_pred             CCChHHH----HHhhccccCCCEEEEEec
Q 020487          215 CMGASYF----QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       215 ~~g~~~~----~~~~~~l~~~g~~v~~g~  239 (325)
                      |+-....    ..+...+.++..++++.+
T Consensus        74 ~vKa~~~~~~l~~l~~~~~~~t~iv~~qN  102 (151)
T PF02558_consen   74 AVKAYQLEQALQSLKPYLDPNTTIVSLQN  102 (151)
T ss_dssp             -SSGGGHHHHHHHHCTGEETTEEEEEESS
T ss_pred             EecccchHHHHHHHhhccCCCcEEEEEeC
Confidence            9876443    444455666767777643

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=95.54  E-value=0.017  Score=49.28  Aligned_cols=74  Identities=22%  Similarity=0.267  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCE-EEeCCCchHHH----HHHHHhCCCcccEEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVA----RVKEETGGKGVDVIL  213 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~----~~~~~~~~~~~d~vi  213 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++...   ..... ..|-.+.....    .+.+..+  .+|+++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~li   82 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---ENYQFVPTDVSSAEEVNHTVAEIIEKFG--RIDGLV   82 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---CceEEEEccCCCHHHHHHHHHHHHHHcC--CCCEEE
Confidence            36789999999999999999999999999999877654321   11111 12333322222    2222223  689999


Q ss_pred             eCCC
Q 020487          214 DCMG  217 (325)
Q Consensus       214 ~~~g  217 (325)
                      .+.|
T Consensus        83 ~~Ag   86 (266)
T PRK06171         83 NNAG   86 (266)
T ss_pred             ECCc
Confidence            9887

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.53  E-value=0.11  Score=42.82  Aligned_cols=99  Identities=21%  Similarity=0.139  Sum_probs=60.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEE---------eCCC-chHHHHHHHHh--
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI---------NYKT-EDFVARVKEET--  204 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~---------~~~~-~~~~~~~~~~~--  204 (325)
                      .++.++|+.|+  +.|.-+..+|. .|.+|++++.++...+.+. +.+.....         .... .....++.+..  
T Consensus        33 ~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  109 (213)
T TIGR03840        33 PAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA  109 (213)
T ss_pred             CCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence            56789999997  46888888875 5999999999999887753 22221000         0000 00011111111  


Q ss_pred             CCCcccEEEeCCCh---------HHHHHhhccccCCCEEEEEec
Q 020487          205 GGKGVDVILDCMGA---------SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       205 ~~~~~d~vi~~~g~---------~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ....||.++|+..-         ..+..+.+.|+|||+++..+.
T Consensus       110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence            12368999997541         235678899999998776654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PLN02476 O-methyltransferase

Probab=95.53  E-value=0.18  Score=43.18  Aligned_cols=102  Identities=17%  Similarity=0.159  Sum_probs=66.6

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHH----HcCCCEEEeCCCchHHHHHHHHh--
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEET--  204 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~--  204 (325)
                      ...+..+..+||-+|.  ..|..++.+++.+  +.+|+.++.+++..+.++    +.|...-+.-...+..+.+.+..  
T Consensus       112 ~L~~~~~ak~VLEIGT--~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~l~~~  189 (278)
T PLN02476        112 MLVQILGAERCIEVGV--YTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGLAAESLKSMIQN  189 (278)
T ss_pred             HHHHhcCCCeEEEecC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhc
Confidence            3445567889999994  6788888888876  457999999988776654    45543222222223333333321  


Q ss_pred             -CCCcccEEEeCCChH----HHHHhhccccCCCEEEE
Q 020487          205 -GGKGVDVILDCMGAS----YFQRNLGSLNIDGRLFI  236 (325)
Q Consensus       205 -~~~~~d~vi~~~g~~----~~~~~~~~l~~~g~~v~  236 (325)
                       ....||.||--....    .+..+++.|++||.++.
T Consensus       190 ~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~  226 (278)
T PLN02476        190 GEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVM  226 (278)
T ss_pred             ccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence             124799997665543    36777889999999875

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.53  E-value=0.087  Score=48.47  Aligned_cols=87  Identities=21%  Similarity=0.323  Sum_probs=55.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH-HHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  220 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~  220 (325)
                      +|+|+|+.|.+|.+++..++..|.+|++.++++++. +.+.++|... .   . +.    .+..  ..+|+|+-|+....
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-~---~-~~----~e~~--~~aDvVIlavp~~~   70 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-A---N-DN----IDAA--KDADIVIISVPINV   70 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-c---c-CH----HHHh--ccCCEEEEecCHHH
Confidence            688998779999999999999999999999887764 4445566421 1   0 11    1111  14677777777544


Q ss_pred             H----HHhhccccCCCEEEEEec
Q 020487          221 F----QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       221 ~----~~~~~~l~~~g~~v~~g~  239 (325)
                      .    ..+...++++..+++++.
T Consensus        71 ~~~vl~~l~~~l~~~~iViDvsS   93 (437)
T PRK08655         71 TEDVIKEVAPHVKEGSLLMDVTS   93 (437)
T ss_pred             HHHHHHHHHhhCCCCCEEEEccc
Confidence            3    233344555666666654

>PRK07041 short chain dehydrogenase; Provisional

Probab=95.53  E-value=0.13  Score=42.75  Aligned_cols=73  Identities=30%  Similarity=0.358  Sum_probs=48.7

Q ss_pred             EEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc--CCC-EEE--eCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          144 LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--GAD-VCI--NYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       144 li~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~--g~~-~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +|+|++|.+|..+++.+...|++|++++++.++.+... .+  +.. +++  |..+......+.+..  ..+|++|.+.|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag   78 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAA   78 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence            58999999999999999999999999999876654432 22  222 222  333333333333333  26899999987


Q ss_pred             h
Q 020487          218 A  218 (325)
Q Consensus       218 ~  218 (325)
                      .
T Consensus        79 ~   79 (230)
T PRK07041         79 D   79 (230)
T ss_pred             C
Confidence            3

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.53  E-value=0.14  Score=44.94  Aligned_cols=87  Identities=20%  Similarity=0.169  Sum_probs=61.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC-
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-  217 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g-  217 (325)
                      .|.++.|+|- |.+|.++++.++..|++|....++.. .+..+..++.++ +         +.+...  ..|++.-+++ 
T Consensus       145 ~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~~~~~~y~-~---------l~ell~--~sDii~l~~Pl  210 (324)
T COG1052         145 RGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPN-PEAEKELGARYV-D---------LDELLA--ESDIISLHCPL  210 (324)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCC-hHHHhhcCceec-c---------HHHHHH--hCCEEEEeCCC
Confidence            3889999997 99999999999999999999998876 333334444433 1         122221  4688766555 


Q ss_pred             hHHH-----HHhhccccCCCEEEEEec
Q 020487          218 ASYF-----QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       218 ~~~~-----~~~~~~l~~~g~~v~~g~  239 (325)
                      ++..     ...+..|++++.+|-++.
T Consensus       211 t~~T~hLin~~~l~~mk~ga~lVNtaR  237 (324)
T COG1052         211 TPETRHLINAEELAKMKPGAILVNTAR  237 (324)
T ss_pred             ChHHhhhcCHHHHHhCCCCeEEEECCC
Confidence            3332     455789999999998864

>PRK12744 short chain dehydrogenase; Provisional

Probab=95.52  E-value=0.096  Score=44.37  Aligned_cols=34  Identities=21%  Similarity=0.367  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG  172 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~  172 (325)
                      .+.+++|+|++|.+|..+++.+...|++|+++++
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~   40 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHY   40 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEec
Confidence            3678999999999999999999999999777754

>PRK07574 formate dehydrogenase; Provisional

Probab=95.52  E-value=0.097  Score=47.10  Aligned_cols=89  Identities=17%  Similarity=0.101  Sum_probs=61.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+|.|+|. |.+|..+++.++.+|++|++..++....+..+..+....     .    .+.+...  ..|+|+-++..
T Consensus       191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~-----~----~l~ell~--~aDvV~l~lPl  258 (385)
T PRK07574        191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYH-----V----SFDSLVS--VCDVVTIHCPL  258 (385)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceec-----C----CHHHHhh--cCCEEEEcCCC
Confidence            4678999998 999999999999999999999987644333334443211     1    1222222  57999888773


Q ss_pred             -HH----H-HHhhccccCCCEEEEEec
Q 020487          219 -SY----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 -~~----~-~~~~~~l~~~g~~v~~g~  239 (325)
                       +.    + ...+..|+++..+|.++.
T Consensus       259 t~~T~~li~~~~l~~mk~ga~lIN~aR  285 (385)
T PRK07574        259 HPETEHLFDADVLSRMKRGSYLVNTAR  285 (385)
T ss_pred             CHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence             22    2 345778899888887754

>PRK12747 short chain dehydrogenase; Provisional

Probab=95.50  E-value=0.18  Score=42.48  Aligned_cols=104  Identities=23%  Similarity=0.381  Sum_probs=62.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cChhhHHHH----HHcCCCE-EE--eCCCch----HHHHHHH----
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADV-CI--NYKTED----FVARVKE----  202 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~-~~~~~~~~~----~~~g~~~-~~--~~~~~~----~~~~~~~----  202 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++.. ++.++.+..    +..+... .+  |.....    ..+.+.+    
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            367899999999999999999999999998875 444433222    2223221 11  222211    1222222    


Q ss_pred             HhCCCcccEEEeCCChH-----------HH---------------HHhhccccCCCEEEEEeccCC
Q 020487          203 ETGGKGVDVILDCMGAS-----------YF---------------QRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       203 ~~~~~~~d~vi~~~g~~-----------~~---------------~~~~~~l~~~g~~v~~g~~~~  242 (325)
                      ..+..++|+++++.|..           .+               ..+++.+...|++|.+++...
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~  148 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  148 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence            12324689999988731           01               134455667799998876553

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=95.47  E-value=0.07  Score=46.37  Aligned_cols=75  Identities=20%  Similarity=0.259  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH---HHHHHcC-CC---EEE--eCCCchHHHHHHHHhCCCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL---AVCKDLG-AD---VCI--NYKTEDFVARVKEETGGKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~---~~~~~~g-~~---~~~--~~~~~~~~~~~~~~~~~~~~  209 (325)
                      .+..|+|+||+|-+|..++..+...|++|.+++|+.++.   +.++++. +.   .++  |..+..   .+.+..  .|+
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~---sf~~ai--~gc   79 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEG---SFDKAI--DGC   79 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccc---hHHHHH--hCC
Confidence            578999999999999999999999999999999998874   3455554 22   122  222222   222223  269


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |.||-++..
T Consensus        80 dgVfH~Asp   88 (327)
T KOG1502|consen   80 DGVFHTASP   88 (327)
T ss_pred             CEEEEeCcc
Confidence            999987653

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.47  E-value=0.068  Score=46.13  Aligned_cols=74  Identities=20%  Similarity=0.085  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-HcCCC-EEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGAD-VCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .+.+++|+|+ |+.+.+++..+..+|+ +|+++.|+.++.+.+. .++.. .+....   ...++....  ..+|+||+|
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~---~~~~~~~~~--~~~DiVIna  197 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE---GDSGGLAIE--KAAEVLVST  197 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc---chhhhhhcc--cCCCEEEEC
Confidence            4778999998 9999999999999998 7999999988776553 33321 111100   001111222  368999999


Q ss_pred             CCh
Q 020487          216 MGA  218 (325)
Q Consensus       216 ~g~  218 (325)
                      ++.
T Consensus       198 Tp~  200 (282)
T TIGR01809       198 VPA  200 (282)
T ss_pred             CCC
Confidence            874

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.46  E-value=0.15  Score=43.61  Aligned_cols=95  Identities=17%  Similarity=0.185  Sum_probs=66.1

Q ss_pred             CcchHHHHHHHHHhhcCCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHH
Q 020487          120 FPEVACTVWSTVFMTSHLS-PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA  198 (325)
Q Consensus       120 l~~~~~~a~~~l~~~~~~~-~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  198 (325)
                      +|+........| +.-++. .|.+++|+|.+..+|.-++.++...|++|++.-....                   +   
T Consensus       144 ~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~-------------------~---  200 (287)
T PRK14176        144 VPCTPHGVIRAL-EEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTD-------------------D---  200 (287)
T ss_pred             CCCcHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCC-------------------C---
Confidence            444333333334 444443 6999999999888999999999999999987762211                   1   


Q ss_pred             HHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487          199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                       +.+.+  +.+|+++.++|.+.+- --+++++|..++.+|...
T Consensus       201 -l~~~~--~~ADIvv~AvG~p~~i-~~~~vk~gavVIDvGin~  239 (287)
T PRK14176        201 -LKKYT--LDADILVVATGVKHLI-KADMVKEGAVIFDVGITK  239 (287)
T ss_pred             -HHHHH--hhCCEEEEccCCcccc-CHHHcCCCcEEEEecccc
Confidence             12222  2689999999987643 346889999999998743

>PLN02686 cinnamoyl-CoA reductase

Probab=95.46  E-value=0.14  Score=46.12  Aligned_cols=44  Identities=18%  Similarity=0.185  Sum_probs=37.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  181 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~  181 (325)
                      ..+.+|||+|++|.+|..++..+...|++|+++.++.++.+.++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~   94 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR   94 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            45789999999999999999999999999999888766554443

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=95.45  E-value=0.24  Score=41.73  Aligned_cols=100  Identities=11%  Similarity=0.115  Sum_probs=66.0

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHH----HcCCCEEEeCCCchHHHHHHHHhC---
Q 020487          135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETG---  205 (325)
Q Consensus       135 ~~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~---  205 (325)
                      .+..+..++|-+|  +.+|++++.+|+.+  +.+|+.+..+++..+.++    +.|...-+........+.+.+...   
T Consensus        75 ~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~a~e~L~~l~~~~~  152 (247)
T PLN02589         75 LKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDQMIEDGK  152 (247)
T ss_pred             HHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeccHHHHHHHHHhccc
Confidence            3445567899999  57899999999877  569999999887766554    455332222223333444444332   


Q ss_pred             -CCcccEEEeCCChH----HHHHhhccccCCCEEEE
Q 020487          206 -GKGVDVILDCMGAS----YFQRNLGSLNIDGRLFI  236 (325)
Q Consensus       206 -~~~~d~vi~~~g~~----~~~~~~~~l~~~g~~v~  236 (325)
                       ...||+||-=....    .+..+++.|++||.++.
T Consensus       153 ~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~  188 (247)
T PLN02589        153 YHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY  188 (247)
T ss_pred             cCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence             24799997655442    36677889999998774

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=95.44  E-value=0.11  Score=46.26  Aligned_cols=74  Identities=14%  Similarity=0.004  Sum_probs=46.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +|||+|++|-+|..+++.+... |.+|++++++..+.........-.++..+-......+.+...  ++|+||.+++
T Consensus         3 ~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~~d~ViH~aa   77 (347)
T PRK11908          3 KVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVK--KCDVILPLVA   77 (347)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHc--CCCEEEECcc
Confidence            6999999999999999988765 689999987655433222211112232222111223333333  5899998764

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.43  E-value=0.078  Score=43.37  Aligned_cols=89  Identities=16%  Similarity=0.159  Sum_probs=56.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh-hHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      |.+|+|.|+ |.+|..-++.+...|++|+++..... ....+.+.+.-..+.. . .....    .  .++++||-+.+.
T Consensus         9 gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~-~-~~~~d----l--~~~~lVi~at~d   79 (205)
T TIGR01470         9 GRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLAR-C-FDADI----L--EGAFLVIAATDD   79 (205)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeC-C-CCHHH----h--CCcEEEEECCCC
Confidence            679999998 99999999999999999999985543 2233333332112211 1 11112    1  368999999998


Q ss_pred             HHH-HHhhccccCCCEEEEE
Q 020487          219 SYF-QRNLGSLNIDGRLFII  237 (325)
Q Consensus       219 ~~~-~~~~~~l~~~g~~v~~  237 (325)
                      ..+ ..+....+..|..|..
T Consensus        80 ~~ln~~i~~~a~~~~ilvn~   99 (205)
T TIGR01470        80 EELNRRVAHAARARGVPVNV   99 (205)
T ss_pred             HHHHHHHHHHHHHcCCEEEE
Confidence            754 3444444555666644

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=95.40  E-value=0.11  Score=44.52  Aligned_cols=76  Identities=16%  Similarity=0.125  Sum_probs=46.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-Hc----CCCEE--E---eCCCchHHHHHHHHhCCCcccE
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DL----GADVC--I---NYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-~~----g~~~~--~---~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      |||+||+|++|..+++.+...+. +++++++++.++-.++ ++    ....+  .   ..-+-.-.+.+.......++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            79999999999999988888886 8999999998876654 34    11111  1   1112222456666666668999


Q ss_pred             EEeCCCh
Q 020487          212 ILDCMGA  218 (325)
Q Consensus       212 vi~~~g~  218 (325)
                      ||.++.-
T Consensus        81 VfHaAA~   87 (293)
T PF02719_consen   81 VFHAAAL   87 (293)
T ss_dssp             EEE----
T ss_pred             EEEChhc
Confidence            9998864

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.39  E-value=0.22  Score=43.04  Aligned_cols=94  Identities=15%  Similarity=0.142  Sum_probs=64.8

Q ss_pred             CcchHHHHHHHHHhhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHH
Q 020487          120 FPEVACTVWSTVFMTSHL-SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA  198 (325)
Q Consensus       120 l~~~~~~a~~~l~~~~~~-~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  198 (325)
                      +|+........| +.-++ -.|.+|.++|.++.+|..++.++...|++|++..+...                   +   
T Consensus       139 ~PcTp~aii~lL-~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~-------------------~---  195 (301)
T PRK14194        139 TPCTPSGCLRLL-EDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST-------------------D---  195 (301)
T ss_pred             CCCcHHHHHHHH-HHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC-------------------C---
Confidence            444433333334 33333 35899999999889999999999999999999864322                   1   


Q ss_pred             HHHHHhCCCcccEEEeCCChHHH-HHhhccccCCCEEEEEeccC
Q 020487          199 RVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       199 ~~~~~~~~~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~g~~~  241 (325)
                       +.+.+  +..|+|+-++|.+.+ ..  .++++|..+|.+|...
T Consensus       196 -l~e~~--~~ADIVIsavg~~~~v~~--~~ik~GaiVIDvgin~  234 (301)
T PRK14194        196 -AKALC--RQADIVVAAVGRPRLIDA--DWLKPGAVVIDVGINR  234 (301)
T ss_pred             -HHHHH--hcCCEEEEecCChhcccH--hhccCCcEEEEecccc
Confidence             12222  257999999998753 32  3489999999998543

>PRK05599 hypothetical protein; Provisional

Probab=95.37  E-value=0.099  Score=44.07  Aligned_cols=74  Identities=23%  Similarity=0.281  Sum_probs=49.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC--EEE--eCCCchH----HHHHHHHhCCCcc
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD--VCI--NYKTEDF----VARVKEETGGKGV  209 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~--~~~--~~~~~~~----~~~~~~~~~~~~~  209 (325)
                      +++|+|+++++|.+++..+. .|++|+++.+++++.+.+.    +.+..  ..+  |-.+...    .+.+.+..+  ++
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~i   78 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAG--EI   78 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcC--CC
Confidence            58999999999999998877 4999999999887765442    33432  222  3223222    223333333  68


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |+++.+.|.
T Consensus        79 d~lv~nag~   87 (246)
T PRK05599         79 SLAVVAFGI   87 (246)
T ss_pred             CEEEEecCc
Confidence            999988874

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.37  E-value=0.14  Score=42.22  Aligned_cols=94  Identities=21%  Similarity=0.248  Sum_probs=60.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCE--EEeCCCchHHHHHHHHhCCCcccEEEe-
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV--CINYKTEDFVARVKEETGGKGVDVILD-  214 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vi~-  214 (325)
                      -+|.+||=.|+.|  |+.. +-+.++|++|+.++.+++..+.++......  -+++.... ..++..  .++.||+|+. 
T Consensus        58 l~g~~vLDvGCGg--G~Ls-e~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~-~edl~~--~~~~FDvV~cm  131 (243)
T COG2227          58 LPGLRVLDVGCGG--GILS-EPLARLGASVTGIDASEKPIEVAKLHALESGVNIDYRQAT-VEDLAS--AGGQFDVVTCM  131 (243)
T ss_pred             CCCCeEEEecCCc--cHhh-HHHHHCCCeeEEecCChHHHHHHHHhhhhccccccchhhh-HHHHHh--cCCCccEEEEh
Confidence            3688899999855  4444 444556999999999999888877422211  12233222 222222  2258999974 


Q ss_pred             ----CCChHH--HHHhhccccCCCEEEEE
Q 020487          215 ----CMGASY--FQRNLGSLNIDGRLFII  237 (325)
Q Consensus       215 ----~~g~~~--~~~~~~~l~~~g~~v~~  237 (325)
                          .+..+.  +....+.++|+|.++..
T Consensus       132 EVlEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         132 EVLEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             hHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence                455443  46778889999988875

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=95.35  E-value=0.082  Score=49.22  Aligned_cols=77  Identities=16%  Similarity=0.242  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh---------------------hhHHHHHHcCCCEEEeCCCchHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---------------------EKLAVCKDLGADVCINYKTEDFV  197 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~---------------------~~~~~~~~~g~~~~~~~~~~~~~  197 (325)
                      .+++|+|+|+ |+.|+.++..++..|.+|+++...+                     ...++++++|.+..++.......
T Consensus       140 ~~~~V~IIG~-GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  218 (467)
T TIGR01318       140 TGKRVAVIGA-GPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI  218 (467)
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence            5789999998 9999999999999999999988654                     23456677887655443221100


Q ss_pred             HHHHHHhCCCcccEEEeCCChH
Q 020487          198 ARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       198 ~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                       .+.+..  ..+|.+|.++|..
T Consensus       219 -~~~~~~--~~~D~vilAtGa~  237 (467)
T TIGR01318       219 -SLDDLL--EDYDAVFLGVGTY  237 (467)
T ss_pred             -CHHHHH--hcCCEEEEEeCCC
Confidence             111112  2699999999863

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=95.35  E-value=0.16  Score=43.69  Aligned_cols=92  Identities=17%  Similarity=0.161  Sum_probs=59.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      .+.+++|+|+ |.+|.+++..+...| .+|+++.|+.++.+.+. .++....+.. ...    ..+..  ..+|+|++|+
T Consensus       122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~----~~~~~--~~~DivInaT  193 (278)
T PRK00258        122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLE----LQEEL--ADFDLIINAT  193 (278)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-ccc----chhcc--ccCCEEEECC
Confidence            4678999998 999999999999999 59999999988776554 3332110111 000    11111  3689999998


Q ss_pred             ChHHH------HHhhccccCCCEEEEEe
Q 020487          217 GASYF------QRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       217 g~~~~------~~~~~~l~~~g~~v~~g  238 (325)
                      +....      ....++++++..++++-
T Consensus       194 p~g~~~~~~~~~~~~~~l~~~~~v~Div  221 (278)
T PRK00258        194 SAGMSGELPLPPLPLSLLRPGTIVYDMI  221 (278)
T ss_pred             cCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence            74321      11235677777777763

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.33  E-value=0.26  Score=42.72  Aligned_cols=35  Identities=17%  Similarity=0.232  Sum_probs=30.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSE  174 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~  174 (325)
                      .+.+++|+|+ |++|.+++..+...|++ |+++.|+.
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            4678999999 89999999988899995 99999885

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.32  E-value=0.073  Score=43.01  Aligned_cols=79  Identities=22%  Similarity=0.299  Sum_probs=55.0

Q ss_pred             CCCEEEEEcC-CchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEEeCCC-ch---HHHHHHHHhCCCcccE
Q 020487          139 PGESFLVHGG-SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCINYKT-ED---FVARVKEETGGKGVDV  211 (325)
Q Consensus       139 ~~~~vli~g~-~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~~~~~-~~---~~~~~~~~~~~~~~d~  211 (325)
                      ....|||+|+ +|++|.+++.-....|+.|+++.|.-++...+. +.|.. .=+|-.. ++   ....++.. ..+..|+
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~-~~Gkld~   84 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRAN-PDGKLDL   84 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhC-CCCceEE
Confidence            4567899987 899999999988899999999999999887776 66642 1223222 22   22233332 3346899


Q ss_pred             EEeCCCh
Q 020487          212 ILDCMGA  218 (325)
Q Consensus       212 vi~~~g~  218 (325)
                      .++..|.
T Consensus        85 L~NNAG~   91 (289)
T KOG1209|consen   85 LYNNAGQ   91 (289)
T ss_pred             EEcCCCC
Confidence            9987764

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.32  E-value=0.19  Score=43.11  Aligned_cols=68  Identities=15%  Similarity=0.219  Sum_probs=48.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                      ....+.+++|+|+ |+.+.+++..+...|+ +|+++.|+.++.+.+. .++...         ...+    ....+|+++
T Consensus       118 ~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~---------~~~~----~~~~~dlvI  183 (272)
T PRK12550        118 QVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW---------RPDL----GGIEADILV  183 (272)
T ss_pred             CCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc---------hhhc----ccccCCEEE
Confidence            3445678999998 9999999999999998 6999999988776554 343110         0011    113589999


Q ss_pred             eCCC
Q 020487          214 DCMG  217 (325)
Q Consensus       214 ~~~g  217 (325)
                      +|+.
T Consensus       184 NaTp  187 (272)
T PRK12550        184 NVTP  187 (272)
T ss_pred             ECCc
Confidence            9976

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=95.29  E-value=0.097  Score=51.03  Aligned_cols=78  Identities=10%  Similarity=0.008  Sum_probs=48.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      .++.+|||+|++|-+|..+++.+... |.+|+++++.............-..+..+-.+....+.+...  ++|+||.++
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~--~~D~ViHlA  390 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIK--KCDVVLPLV  390 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhc--CCCEEEECc
Confidence            46788999999999999999988875 789999997664432221111112222222211122333332  689999877


Q ss_pred             C
Q 020487          217 G  217 (325)
Q Consensus       217 g  217 (325)
                      +
T Consensus       391 a  391 (660)
T PRK08125        391 A  391 (660)
T ss_pred             c
Confidence            5

>PLN03139 formate dehydrogenase; Provisional

Probab=95.26  E-value=0.12  Score=46.61  Aligned_cols=89  Identities=16%  Similarity=0.141  Sum_probs=61.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+|.|+|. |.+|..+++.++.+|++|++..++....+..++.|....     .+    +.+...  ..|+|+.++..
T Consensus       198 ~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~-----~~----l~ell~--~sDvV~l~lPl  265 (386)
T PLN03139        198 EGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFE-----ED----LDAMLP--KCDVVVINTPL  265 (386)
T ss_pred             CCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceec-----CC----HHHHHh--hCCEEEEeCCC
Confidence            4779999997 999999999999999999998876544444444443221     11    222222  47888888773


Q ss_pred             -HH----H-HHhhccccCCCEEEEEec
Q 020487          219 -SY----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 -~~----~-~~~~~~l~~~g~~v~~g~  239 (325)
                       +.    + ...+..|+++..+|.++.
T Consensus       266 t~~T~~li~~~~l~~mk~ga~lIN~aR  292 (386)
T PLN03139        266 TEKTRGMFNKERIAKMKKGVLIVNNAR  292 (386)
T ss_pred             CHHHHHHhCHHHHhhCCCCeEEEECCC
Confidence             22    2 355778899888887754

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.26  E-value=0.16  Score=40.68  Aligned_cols=97  Identities=12%  Similarity=0.065  Sum_probs=64.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCC-C--chHHHHHHHHhCCCcccEEEe
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK-T--EDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~-~--~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      -.|.+++|+|-+..+|.-++.++...|++|++...+.-..  ....+.   ..+. .  .+....+.+.+.  .+|+++.
T Consensus        60 l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~--~~~~~~---~~hs~t~~~~~~~~l~~~~~--~ADIVIs  132 (197)
T cd01079          60 LYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV--FTRGES---IRHEKHHVTDEEAMTLDCLS--QSDVVIT  132 (197)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc--cccccc---cccccccccchhhHHHHHhh--hCCEEEE
Confidence            3589999999999999999999999999999875332111  000010   0111 1  121112334432  6899999


Q ss_pred             CCChHHHHHhhccccCCCEEEEEeccC
Q 020487          215 CMGASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       215 ~~g~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      ++|.+.+.---+++++|..+|.+|...
T Consensus       133 AvG~~~~~i~~d~ik~GavVIDVGi~~  159 (197)
T cd01079         133 GVPSPNYKVPTELLKDGAICINFASIK  159 (197)
T ss_pred             ccCCCCCccCHHHcCCCcEEEEcCCCc
Confidence            999887533357899999999998653

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=95.25  E-value=0.085  Score=46.32  Aligned_cols=37  Identities=22%  Similarity=0.282  Sum_probs=33.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK  176 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~  176 (325)
                      +.+|||+|++|.+|..++..+...|.+|++++++...
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~   40 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND   40 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence            5789999999999999999999999999998877654

>PLN02427 UDP-apiose/xylose synthase

Probab=95.24  E-value=0.12  Score=46.82  Aligned_cols=76  Identities=9%  Similarity=0.027  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCC------CEEEeCCCchHHHHHHHHhCCCcccE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGA------DVCINYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      +..+|||+|++|-+|..+++.+... |.+|++++++.++...+...+.      -..+..+-.+ ...+.+...  ++|+
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d-~~~l~~~~~--~~d~   89 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKH-DSRLEGLIK--MADL   89 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCC-hHHHHHHhh--cCCE
Confidence            3467999999999999999988877 5899999877665544433221      1222222222 223344443  5899


Q ss_pred             EEeCCC
Q 020487          212 ILDCMG  217 (325)
Q Consensus       212 vi~~~g  217 (325)
                      ||.+++
T Consensus        90 ViHlAa   95 (386)
T PLN02427         90 TINLAA   95 (386)
T ss_pred             EEEccc
Confidence            999886

>PRK07069 short chain dehydrogenase; Validated

Probab=95.24  E-value=0.14  Score=43.06  Aligned_cols=37  Identities=24%  Similarity=0.375  Sum_probs=31.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecC-hhhHHH
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAV  179 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~-~~~~~~  179 (325)
                      ++|+|++|.+|..+++.+...|++|+++.++ .++.+.
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~   39 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDA   39 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHH
Confidence            7999999999999999998899999999987 444433

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=95.22  E-value=0.13  Score=43.01  Aligned_cols=75  Identities=32%  Similarity=0.452  Sum_probs=47.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhHHHH-HH---cCCC-EEE--eCCCchHH----HHHHHHhCCCc
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC-KD---LGAD-VCI--NYKTEDFV----ARVKEETGGKG  208 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~~~~-~~---~g~~-~~~--~~~~~~~~----~~~~~~~~~~~  208 (325)
                      .++||+|++|.+|..++..+...|++|+++.+ +.++.+.. .+   .+.. ..+  |..+....    +.+.+..  ..
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL--GP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc--CC
Confidence            36899999999999999999999999999887 44433322 11   2221 122  33332222    2222223  26


Q ss_pred             ccEEEeCCC
Q 020487          209 VDVILDCMG  217 (325)
Q Consensus       209 ~d~vi~~~g  217 (325)
                      +|.+|.+.|
T Consensus        79 id~vi~~ag   87 (242)
T TIGR01829        79 IDVLVNNAG   87 (242)
T ss_pred             CcEEEECCC
Confidence            899999987

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=95.22  E-value=0.41  Score=41.68  Aligned_cols=89  Identities=8%  Similarity=0.031  Sum_probs=58.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF  221 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~  221 (325)
                      +|.++|. |.+|...+.-+...|.+|++..++.++.+.+.+.+....     .+ ..++.+..  ...|+|+-|+....+
T Consensus         2 ~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~-----~s-~~~~~~~~--~~~dvIi~~vp~~~~   72 (298)
T TIGR00872         2 QLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGV-----AN-LRELSQRL--SAPRVVWVMVPHGIV   72 (298)
T ss_pred             EEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCccc-----CC-HHHHHhhc--CCCCEEEEEcCchHH
Confidence            5889998 999999888888889999999999998888877654321     11 11222221  246888888776443


Q ss_pred             H----HhhccccCCCEEEEEec
Q 020487          222 Q----RNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       222 ~----~~~~~l~~~g~~v~~g~  239 (325)
                      .    .+...++++-.++.++.
T Consensus        73 ~~v~~~l~~~l~~g~ivid~st   94 (298)
T TIGR00872        73 DAVLEELAPTLEKGDIVIDGGN   94 (298)
T ss_pred             HHHHHHHHhhCCCCCEEEECCC
Confidence            3    33444555555555543

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK07201 short chain dehydrogenase; Provisional

Probab=95.21  E-value=0.093  Score=51.12  Aligned_cols=77  Identities=27%  Similarity=0.371  Sum_probs=52.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHH----HHHHHHhCCCc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFV----ARVKEETGGKG  208 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~----~~~~~~~~~~~  208 (325)
                      +.+++|+|++|.+|..++..+...|++|+++++++++.+.+.    ..+... .+  |-.+....    +.+.+..+  .
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g--~  448 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG--H  448 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC--C
Confidence            578999999999999999999889999999999887765443    223221 22  32222211    22222233  5


Q ss_pred             ccEEEeCCCh
Q 020487          209 VDVILDCMGA  218 (325)
Q Consensus       209 ~d~vi~~~g~  218 (325)
                      +|+++.+.|.
T Consensus       449 id~li~~Ag~  458 (657)
T PRK07201        449 VDYLVNNAGR  458 (657)
T ss_pred             CCEEEECCCC
Confidence            8999999873

>PRK08317 hypothetical protein; Provisional

Probab=95.20  E-value=0.26  Score=41.03  Aligned_cols=99  Identities=19%  Similarity=0.212  Sum_probs=65.8

Q ss_pred             HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHHc----CCC-EEEeCCCchHHHHHHHHh
Q 020487          132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDL----GAD-VCINYKTEDFVARVKEET  204 (325)
Q Consensus       132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~~  204 (325)
                      .+...+.++++||-+|+ |. |..+..+++..  +.+++.++.++...+.+++.    +.. .+...+.....      .
T Consensus        12 ~~~~~~~~~~~vLdiG~-G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~------~   83 (241)
T PRK08317         12 FELLAVQPGDRVLDVGC-GP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLP------F   83 (241)
T ss_pred             HHHcCCCCCCEEEEeCC-CC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCC------C
Confidence            35667889999999998 43 88888888876  36999999998887777653    111 12211111100      1


Q ss_pred             CCCcccEEEeCCC-----h--HHHHHhhccccCCCEEEEEe
Q 020487          205 GGKGVDVILDCMG-----A--SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       205 ~~~~~d~vi~~~g-----~--~~~~~~~~~l~~~g~~v~~g  238 (325)
                      ....||+|+....     .  ..+..+.+.|+++|.++...
T Consensus        84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             CCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence            2246898876432     2  23678889999999998765

>PRK06940 short chain dehydrogenase; Provisional

Probab=95.19  E-value=0.13  Score=44.16  Aligned_cols=77  Identities=21%  Similarity=0.268  Sum_probs=48.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHHHHHHHh-CCCcccE
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVARVKEET-GGKGVDV  211 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~~~~~~~-~~~~~d~  211 (325)
                      +++++|+|+ |.+|..++..+. .|++|+++++++++.+.+.    ..+.. ..+  |-.+......+.+.. ...++|+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            357899998 799999999885 7999999999877654332    22322 122  333332222222221 1136899


Q ss_pred             EEeCCCh
Q 020487          212 ILDCMGA  218 (325)
Q Consensus       212 vi~~~g~  218 (325)
                      ++++.|.
T Consensus        80 li~nAG~   86 (275)
T PRK06940         80 LVHTAGV   86 (275)
T ss_pred             EEECCCc
Confidence            9999874

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=95.18  E-value=0.069  Score=46.04  Aligned_cols=32  Identities=22%  Similarity=0.276  Sum_probs=29.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      +|||+|++|.+|..+++.+...|.+|+++.++
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~   32 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS   32 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence            48999999999999999999999999999875

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.18  E-value=0.27  Score=42.49  Aligned_cols=94  Identities=13%  Similarity=0.151  Sum_probs=64.7

Q ss_pred             CcchHHHHHHHHHhhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cChhhHHHHHHcCCCEEEeCCCchHH
Q 020487          120 FPEVACTVWSTVFMTSHL-SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVCKDLGADVCINYKTEDFV  197 (325)
Q Consensus       120 l~~~~~~a~~~l~~~~~~-~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~  197 (325)
                      +|+.....+..| +.-++ -.|.+|.|+|.++.+|..++..+...|+.|++.. ++..                      
T Consensus       138 ~PcTp~ai~~ll-~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~----------------------  194 (296)
T PRK14188        138 VPCTPLGCMMLL-RRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD----------------------  194 (296)
T ss_pred             cCCCHHHHHHHH-HHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC----------------------
Confidence            444433344334 33333 3599999999889999999999999999999884 4321                      


Q ss_pred             HHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487          198 ARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       198 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                        +.+.+  +..|+|+-|+|.+.+-. -.++++|..++.+|...
T Consensus       195 --l~e~~--~~ADIVIsavg~~~~v~-~~~lk~GavVIDvGin~  233 (296)
T PRK14188        195 --LPAVC--RRADILVAAVGRPEMVK-GDWIKPGATVIDVGINR  233 (296)
T ss_pred             --HHHHH--hcCCEEEEecCChhhcc-hheecCCCEEEEcCCcc
Confidence              12222  15799999999876422 13489999999998654

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=95.17  E-value=0.16  Score=48.80  Aligned_cols=94  Identities=9%  Similarity=0.041  Sum_probs=70.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  220 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~  220 (325)
                      +.++|.|. |.+|..+++.++..|.++++++.++++.+.+++.|...++ .+..+  .++.+..+-..+|.++-+.+++.
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~-GDat~--~~~L~~agi~~A~~vv~~~~d~~  476 (601)
T PRK03659        401 PQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYY-GDATQ--LELLRAAGAEKAEAIVITCNEPE  476 (601)
T ss_pred             CCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEE-eeCCC--HHHHHhcCCccCCEEEEEeCCHH
Confidence            57899998 9999999999999999999999999999999988765433 33322  24455566668999999998764


Q ss_pred             H----HHhhccccCCCEEEEEe
Q 020487          221 F----QRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       221 ~----~~~~~~l~~~g~~v~~g  238 (325)
                      .    ....+.+.|+-+++...
T Consensus       477 ~n~~i~~~~r~~~p~~~IiaRa  498 (601)
T PRK03659        477 DTMKIVELCQQHFPHLHILARA  498 (601)
T ss_pred             HHHHHHHHHHHHCCCCeEEEEe
Confidence            3    23345667777887654

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=95.17  E-value=0.087  Score=44.99  Aligned_cols=101  Identities=15%  Similarity=0.159  Sum_probs=66.0

Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCC--CEE--EeCCCchHHHHHHHHhCC
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA--DVC--INYKTEDFVARVKEETGG  206 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~--~~~--~~~~~~~~~~~~~~~~~~  206 (325)
                      +.....+.++.+||=+|+ | .|..+..+++..+++|+.++.++...+.+++...  +.+  ...+...      .-...
T Consensus        44 ~l~~l~l~~~~~VLDiGc-G-~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~------~~~~~  115 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGS-G-LGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILK------KDFPE  115 (263)
T ss_pred             HHHhCCCCCCCEEEEEcC-C-CChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCccc------CCCCC
Confidence            345667899999999987 3 4666677777778999999999888777765321  111  1111110      01123


Q ss_pred             CcccEEEeC-----CC--h--HHHHHhhccccCCCEEEEEec
Q 020487          207 KGVDVILDC-----MG--A--SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       207 ~~~d~vi~~-----~g--~--~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ..||+|+..     .+  .  ..+..+.+.|+|||+++....
T Consensus       116 ~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        116 NTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             CCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            469999862     12  1  235777899999999998754

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=95.14  E-value=0.24  Score=43.11  Aligned_cols=86  Identities=20%  Similarity=0.199  Sum_probs=61.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+|.|+|- |.+|.+.++.++..|.+|++..+.....+.+...|+. +.     +    +.+...  ..|+|+-+++.
T Consensus        15 kgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~-v~-----s----l~Eaak--~ADVV~llLPd   81 (335)
T PRK13403         15 QGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFE-VM-----S----VSEAVR--TAQVVQMLLPD   81 (335)
T ss_pred             CcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCE-EC-----C----HHHHHh--cCCEEEEeCCC
Confidence            4789999998 9999999999999999999987665555556666653 21     1    222222  57999988875


Q ss_pred             HH----H-HHhhccccCCCEEEEE
Q 020487          219 SY----F-QRNLGSLNIDGRLFII  237 (325)
Q Consensus       219 ~~----~-~~~~~~l~~~g~~v~~  237 (325)
                      +.    + ...+..|+++..++..
T Consensus        82 ~~t~~V~~~eil~~MK~GaiL~f~  105 (335)
T PRK13403         82 EQQAHVYKAEVEENLREGQMLLFS  105 (335)
T ss_pred             hHHHHHHHHHHHhcCCCCCEEEEC
Confidence            32    2 3456778888766544

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=95.12  E-value=0.28  Score=43.88  Aligned_cols=95  Identities=16%  Similarity=0.242  Sum_probs=62.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC--CCEEEEEe--cChhhH-HHHHHcCCCEEEeCCCchHHHHHH--------------
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTA--GSEEKL-AVCKDLGADVCINYKTEDFVARVK--------------  201 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~--~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~--------------  201 (325)
                      .+|.|+|++|++|..++.+.+..  .++|++++  .+.++. +++++++...+.-.+... ...++              
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~-~~~l~~~l~~~~~~v~~G~   80 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEA-AKELKEALAAAGIEVLAGE   80 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHH-HHHHHHhhccCCceEEECh
Confidence            47899999999999999998876  57888886  333333 445678877765444321 22222              


Q ss_pred             ----HHhCCCcccEEEeCCChH-HHHHhhccccCCCEEEE
Q 020487          202 ----EETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFI  236 (325)
Q Consensus       202 ----~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~  236 (325)
                          +......+|+|+.++++. .+...+.+++.|-++.+
T Consensus        81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL  120 (385)
T PRK05447         81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL  120 (385)
T ss_pred             hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence                223334689999987764 46667777777655554

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.11  E-value=0.22  Score=42.51  Aligned_cols=95  Identities=18%  Similarity=0.264  Sum_probs=65.7

Q ss_pred             CcchHHHHHHHHHhhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHH
Q 020487          120 FPEVACTVWSTVFMTSHL-SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA  198 (325)
Q Consensus       120 l~~~~~~a~~~l~~~~~~-~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  198 (325)
                      +|+........| +.-++ -.|.+++|.|.+..+|.-++.++...|++|++.-...                   .+.  
T Consensus       138 ~PcTp~av~~lL-~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T-------------------~~l--  195 (278)
T PRK14172        138 LPCTPNSVITLI-KSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKT-------------------KNL--  195 (278)
T ss_pred             cCCCHHHHHHHH-HHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC-------------------CCH--
Confidence            344333333333 33333 3589999999999999999999999999887775221                   111  


Q ss_pred             HHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487          199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                        .+.+  +..|+++-++|.+.+- --+++++|..+|.+|...
T Consensus       196 --~~~~--~~ADIvIsAvGkp~~i-~~~~ik~gavVIDvGin~  233 (278)
T PRK14172        196 --KEVC--KKADILVVAIGRPKFI-DEEYVKEGAIVIDVGTSS  233 (278)
T ss_pred             --HHHH--hhCCEEEEcCCCcCcc-CHHHcCCCcEEEEeeccc
Confidence              2222  2589999999987752 246799999999998654

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=95.10  E-value=0.13  Score=42.88  Aligned_cols=74  Identities=28%  Similarity=0.390  Sum_probs=46.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecCh-hhHH----HHHHcCCC-EEE--eCCCchHHHHH----HHHhCCCccc
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLA----VCKDLGAD-VCI--NYKTEDFVARV----KEETGGKGVD  210 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~-~~~~----~~~~~g~~-~~~--~~~~~~~~~~~----~~~~~~~~~d  210 (325)
                      ++|+|++|.+|..+++.+...|++|+++.++. ++.+    .++..+.. ..+  |-.+......+    .+..+  ++|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELG--PID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC--CCC
Confidence            57999999999999999998999999998764 2222    22334432 122  32232222222    22222  689


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      .++.+.|.
T Consensus        79 ~vi~~ag~   86 (239)
T TIGR01830        79 ILVNNAGI   86 (239)
T ss_pred             EEEECCCC
Confidence            99998874

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.08  E-value=0.12  Score=45.78  Aligned_cols=87  Identities=17%  Similarity=0.177  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.++.|+|. |.+|..+++.++..|++|++..++.... .....+...      .+    +.+...  ..|+|+-|+..
T Consensus       149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~~~~~------~~----l~ell~--~aDiV~l~lP~  214 (333)
T PRK13243        149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE-AEKELGAEY------RP----LEELLR--ESDFVSLHVPL  214 (333)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh-hHHHcCCEe------cC----HHHHHh--hCCEEEEeCCC
Confidence            4789999998 9999999999999999999998765432 223333311      11    122222  46888888764


Q ss_pred             HH-----H-HHhhccccCCCEEEEEec
Q 020487          219 SY-----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 ~~-----~-~~~~~~l~~~g~~v~~g~  239 (325)
                      ..     + ...+..|+++..+|.++.
T Consensus       215 t~~T~~~i~~~~~~~mk~ga~lIN~aR  241 (333)
T PRK13243        215 TKETYHMINEERLKLMKPTAILVNTAR  241 (333)
T ss_pred             ChHHhhccCHHHHhcCCCCeEEEECcC
Confidence            21     2 355678888888887754

>PLN00198 anthocyanidin reductase; Provisional

Probab=95.08  E-value=0.14  Score=45.46  Aligned_cols=75  Identities=17%  Similarity=0.207  Sum_probs=48.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH---HHc---CCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC---KDL---GADVCINYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~---~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                      +.+|||+|++|-+|..++..+...|++|++++++.......   ..+   +.-.++..+-.+ ...+.+...  ++|.||
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~--~~d~vi   85 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTD-EESFEAPIA--GCDLVF   85 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCC-hHHHHHHHh--cCCEEE
Confidence            67899999999999999999999999998888765433221   111   111233222222 122333333  589999


Q ss_pred             eCCC
Q 020487          214 DCMG  217 (325)
Q Consensus       214 ~~~g  217 (325)
                      .+++
T Consensus        86 h~A~   89 (338)
T PLN00198         86 HVAT   89 (338)
T ss_pred             EeCC
Confidence            8886

>PLN02240 UDP-glucose 4-epimerase

Probab=95.07  E-value=0.15  Score=45.50  Aligned_cols=34  Identities=29%  Similarity=0.439  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      +.+++|+|++|.+|..+++.+...|.+|+++++.
T Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~   38 (352)
T PLN02240          5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNL   38 (352)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999998889999998754

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=95.05  E-value=0.16  Score=42.63  Aligned_cols=77  Identities=17%  Similarity=0.249  Sum_probs=46.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cChhhHHHH----HHcCCCE-EE--eCCCchHHHHH-HHHh-CCCccc
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADV-CI--NYKTEDFVARV-KEET-GGKGVD  210 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~-~~~~~~~~~----~~~g~~~-~~--~~~~~~~~~~~-~~~~-~~~~~d  210 (325)
                      .+++|+|+++.+|..+++.+...|++|+++. ++.++.+..    +..+... .+  |..+......+ .+.. ....+|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            4799999999999999999999999988765 444433322    2233222 22  22222212122 1111 112689


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      ++|.++|
T Consensus        83 ~li~~ag   89 (248)
T PRK06947         83 ALVNNAG   89 (248)
T ss_pred             EEEECCc
Confidence            9999887

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=95.04  E-value=0.3  Score=42.11  Aligned_cols=42  Identities=17%  Similarity=0.185  Sum_probs=35.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK  181 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~  181 (325)
                      .+.+++|+|+ |+.+.+++..+...|+ +++++.|+.++.+.+.
T Consensus       126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La  168 (283)
T PRK14027        126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALA  168 (283)
T ss_pred             CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence            3678999998 9999999999988998 7999999988766553

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.03  E-value=0.092  Score=45.97  Aligned_cols=87  Identities=13%  Similarity=0.092  Sum_probs=60.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.++.|+|- |.+|..+++.++..|++|++..++.++..     +.....  .    ...+.+...  ..|+|+.+...
T Consensus       135 ~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~-----~~~~~~--~----~~~l~e~l~--~aDvvv~~lPl  200 (312)
T PRK15469        135 EDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP-----GVQSFA--G----REELSAFLS--QTRVLINLLPN  200 (312)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC-----Cceeec--c----cccHHHHHh--cCCEEEECCCC
Confidence            4789999998 99999999999999999999987643321     111111  1    112333333  57999988874


Q ss_pred             H-H----H-HHhhccccCCCEEEEEec
Q 020487          219 S-Y----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 ~-~----~-~~~~~~l~~~g~~v~~g~  239 (325)
                      . .    + ...++.|+++..+|.+|.
T Consensus       201 t~~T~~li~~~~l~~mk~ga~lIN~aR  227 (312)
T PRK15469        201 TPETVGIINQQLLEQLPDGAYLLNLAR  227 (312)
T ss_pred             CHHHHHHhHHHHHhcCCCCcEEEECCC
Confidence            2 2    2 345788999998888764

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=95.02  E-value=0.28  Score=47.35  Aligned_cols=93  Identities=11%  Similarity=0.164  Sum_probs=69.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  220 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~  220 (325)
                      .+++|.|. |.+|..+++.++..|.++++++.++++.+.+++.|... +..+..+  .++.+..+-..+|.++-+.+++.
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v-~~GDat~--~~~L~~agi~~A~~vvv~~~d~~  476 (621)
T PRK03562        401 PRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKV-FYGDATR--MDLLESAGAAKAEVLINAIDDPQ  476 (621)
T ss_pred             CcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeE-EEEeCCC--HHHHHhcCCCcCCEEEEEeCCHH
Confidence            57999998 99999999999999999999999999999998887654 3333322  23444456667899999988754


Q ss_pred             H----HHhhccccCCCEEEEE
Q 020487          221 F----QRNLGSLNIDGRLFII  237 (325)
Q Consensus       221 ~----~~~~~~l~~~g~~v~~  237 (325)
                      .    ....+.+.|+-+++..
T Consensus       477 ~n~~i~~~ar~~~p~~~iiaR  497 (621)
T PRK03562        477 TSLQLVELVKEHFPHLQIIAR  497 (621)
T ss_pred             HHHHHHHHHHHhCCCCeEEEE
Confidence            2    2334556677666654

>PRK07578 short chain dehydrogenase; Provisional

Probab=95.02  E-value=0.15  Score=41.28  Aligned_cols=64  Identities=23%  Similarity=0.314  Sum_probs=43.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      +++|+|+++.+|..++..+... ++|+++.++..          ....|-.+......+.+..+  ++|+++.+.|.
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------~~~~D~~~~~~~~~~~~~~~--~id~lv~~ag~   65 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------DVQVDITDPASIRALFEKVG--KVDAVVSAAGK   65 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------ceEecCCChHHHHHHHHhcC--CCCEEEECCCC
Confidence            6899999999999998888777 89999987643          12234333333333333333  58999888863

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.02  E-value=0.36  Score=41.73  Aligned_cols=90  Identities=14%  Similarity=0.075  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-HcC----CCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLG----ADVCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      .+.+++|+|+ |+.|.+++..+...|+ +|+++.++.++.+.+. .++    ...+....      .+.+..  ..+|+|
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~------~~~~~~--~~aDiV  196 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS------DLAAAL--AAADGL  196 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc------chHhhh--CCCCEE
Confidence            4578999998 9999999999999998 8999999988776543 332    11222111      111112  258999


Q ss_pred             EeCCChHH-----HHHhhccccCCCEEEEE
Q 020487          213 LDCMGASY-----FQRNLGSLNIDGRLFII  237 (325)
Q Consensus       213 i~~~g~~~-----~~~~~~~l~~~g~~v~~  237 (325)
                      |+|+....     .....+.++++..++++
T Consensus       197 InaTp~Gm~~~~~~~~~~~~l~~~~~v~Di  226 (284)
T PRK12549        197 VHATPTGMAKHPGLPLPAELLRPGLWVADI  226 (284)
T ss_pred             EECCcCCCCCCCCCCCCHHHcCCCcEEEEe
Confidence            99954211     11112346666666655

>PLN00015 protochlorophyllide reductase

Probab=95.02  E-value=0.14  Score=44.86  Aligned_cols=74  Identities=20%  Similarity=0.254  Sum_probs=47.9

Q ss_pred             EEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHH-HcCC--CE----EEeCCCchHHHHHHH-HhC-CCcccEEE
Q 020487          144 LVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK-DLGA--DV----CINYKTEDFVARVKE-ETG-GKGVDVIL  213 (325)
Q Consensus       144 li~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~-~~g~--~~----~~~~~~~~~~~~~~~-~~~-~~~~d~vi  213 (325)
                      +|+|+++++|..+++.+...| ++|++++++.++.+.+. +++.  ..    ..|-.+....+.+.+ ... ...+|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            589999999999999998899 89999998887665443 3321  11    123333332222222 211 23689999


Q ss_pred             eCCC
Q 020487          214 DCMG  217 (325)
Q Consensus       214 ~~~g  217 (325)
                      ++.|
T Consensus        81 nnAG   84 (308)
T PLN00015         81 CNAA   84 (308)
T ss_pred             ECCC
Confidence            9886

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=95.02  E-value=0.21  Score=42.65  Aligned_cols=33  Identities=21%  Similarity=0.233  Sum_probs=29.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      .+++|+|+++.+|..+++.+...|++|+++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~   34 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHR   34 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCC
Confidence            468999999999999999999999999988643

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08309 short chain dehydrogenase; Provisional

Probab=94.99  E-value=1.2  Score=35.50  Aligned_cols=78  Identities=22%  Similarity=0.181  Sum_probs=45.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCC--C-EE--EeCCCchH-HHHHHHHh-CCCcccEEE
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGA--D-VC--INYKTEDF-VARVKEET-GGKGVDVIL  213 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~--~-~~--~~~~~~~~-~~~~~~~~-~~~~~d~vi  213 (325)
                      +++|+|++| +|..+++.+...|++|++.+++.++.+.+.. ++.  . ..  .|..+... ...+.... ..+++|++|
T Consensus         2 ~vlVtGGtG-~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv   80 (177)
T PRK08309          2 HALVIGGTG-MLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV   80 (177)
T ss_pred             EEEEECcCH-HHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            589999975 5445666666789999999988777655432 321  1 12  24443222 22222221 123679999


Q ss_pred             eCCChHH
Q 020487          214 DCMGASY  220 (325)
Q Consensus       214 ~~~g~~~  220 (325)
                      +.+-...
T Consensus        81 ~~vh~~~   87 (177)
T PRK08309         81 AWIHSSA   87 (177)
T ss_pred             Eeccccc
Confidence            8775543

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.98  E-value=0.12  Score=50.10  Aligned_cols=76  Identities=20%  Similarity=0.221  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh---------------------hHHHHHHcCCCEEEeCCCchHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE---------------------KLAVCKDLGADVCINYKTEDFV  197 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~---------------------~~~~~~~~g~~~~~~~~~~~~~  197 (325)
                      .+++|+|+|+ |..|+.++..++..|.+|+++.+.+.                     +.++++++|.+..++.......
T Consensus       309 ~~kkVaIIG~-GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGA-GPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            4899999998 99999999999999999999986652                     3456667887665544321100


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 020487          198 ARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       198 ~~~~~~~~~~~~d~vi~~~g~  218 (325)
                       .+.+..  ..||.+|.++|.
T Consensus       388 -~~~~l~--~~~DaV~latGa  405 (639)
T PRK12809        388 -TFSDLT--SEYDAVFIGVGT  405 (639)
T ss_pred             -CHHHHH--hcCCEEEEeCCC
Confidence             111222  268999998885

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=94.96  E-value=0.22  Score=43.17  Aligned_cols=58  Identities=26%  Similarity=0.387  Sum_probs=49.4

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe---cChhhHHHHHHcCCCEEEe
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA---GSEEKLAVCKDLGADVCIN  190 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~---~~~~~~~~~~~~g~~~~~~  190 (325)
                      ....+.||.++||-.-+|..|..++.++...|++++++.   .+.+++..++.+|+..+..
T Consensus        96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~t  156 (362)
T KOG1252|consen   96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILT  156 (362)
T ss_pred             HcCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEec
Confidence            556789999999999999999999999999999999987   4455777888999876653

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.95  E-value=0.28  Score=41.56  Aligned_cols=33  Identities=27%  Similarity=0.311  Sum_probs=29.2

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEe
Q 020487          139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTA  171 (325)
Q Consensus       139 ~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~  171 (325)
                      +|.+++|+|++  +++|..++..+...|++|++++
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~   39 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY   39 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence            47899999997  4899999999999999999875

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=94.93  E-value=0.37  Score=40.23  Aligned_cols=104  Identities=20%  Similarity=0.275  Sum_probs=71.3

Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHHH----cCCCE--EEeCCCchHHHHHHHH
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKD----LGADV--CINYKTEDFVARVKEE  203 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~  203 (325)
                      +.......+|++||=.++  +.|-.+..+++..| .+|++++-++.-++.+++    .+...  .+..+...    +-  
T Consensus        43 ~i~~~~~~~g~~vLDva~--GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~----LP--  114 (238)
T COG2226          43 LISLLGIKPGDKVLDVAC--GTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAEN----LP--  114 (238)
T ss_pred             HHHhhCCCCCCEEEEecC--CccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhh----CC--
Confidence            334555668999998875  56888888888886 499999999998877764    22221  12222211    11  


Q ss_pred             hCCCcccEEEeCCCh-------HHHHHhhccccCCCEEEEEeccCC
Q 020487          204 TGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       204 ~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                      ..++.||++..+.|-       ..+.++.+.|+|||+++.+-....
T Consensus       115 f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p  160 (238)
T COG2226         115 FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKP  160 (238)
T ss_pred             CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCC
Confidence            334578998877663       347888999999999998865543

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.92  E-value=0.22  Score=38.81  Aligned_cols=81  Identities=27%  Similarity=0.386  Sum_probs=57.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh-HHHHHHcCCCEEEeCCC----chHHHHHHHHh-CCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDLGADVCINYKT----EDFVARVKEET-GGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~-~~~~~~~g~~~~~~~~~----~~~~~~~~~~~-~~~~~d~v  212 (325)
                      +|-..+|+|+.+++|.+++..+...|+.|+..+....+ .+.++++|...++...+    ++....+...- .-...|..
T Consensus         8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~   87 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL   87 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence            46667999999999999999999999999999866654 45677899877764433    22222222211 11258999


Q ss_pred             EeCCChH
Q 020487          213 LDCMGAS  219 (325)
Q Consensus       213 i~~~g~~  219 (325)
                      ++|.|..
T Consensus        88 vncagia   94 (260)
T KOG1199|consen   88 VNCAGIA   94 (260)
T ss_pred             eecccee
Confidence            9999864

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=94.91  E-value=0.14  Score=42.69  Aligned_cols=101  Identities=18%  Similarity=0.275  Sum_probs=69.8

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHH----HcCCCEEEeCCCchHHHHHHHHhCC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~  206 (325)
                      .+.++.||++|+=.|.  +.|.+++.+|+..|.  +|+.....++..+.++    +++....+....    .++.+....
T Consensus        88 ~~~gi~pg~rVlEAGt--GSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~----~Dv~~~~~~  161 (256)
T COG2519          88 ARLGISPGSRVLEAGT--GSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL----GDVREGIDE  161 (256)
T ss_pred             HHcCCCCCCEEEEccc--CchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe----ccccccccc
Confidence            5678899999988774  468888999988864  8999998877665544    345433222112    233443334


Q ss_pred             CcccEEEeCCCh--HHHHHhhccccCCCEEEEEec
Q 020487          207 KGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       207 ~~~d~vi~~~g~--~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ..+|.+|==...  ..++.+.+.|++||.++.+..
T Consensus       162 ~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P  196 (256)
T COG2519         162 EDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP  196 (256)
T ss_pred             cccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence            478887655544  457899999999999998854

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.90  E-value=0.19  Score=42.45  Aligned_cols=34  Identities=32%  Similarity=0.411  Sum_probs=30.0

Q ss_pred             CCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecC
Q 020487          140 GESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       140 ~~~vli~g~~g--~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      +.+++|+|+++  .+|..++..+...|++|++++++
T Consensus         5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~   40 (256)
T PRK12748          5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS   40 (256)
T ss_pred             CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence            57899999974  79999998888889999999876

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.90  E-value=0.34  Score=41.56  Aligned_cols=95  Identities=16%  Similarity=0.194  Sum_probs=65.5

Q ss_pred             CcchHHHHHHHHHhhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHH
Q 020487          120 FPEVACTVWSTVFMTSHL-SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA  198 (325)
Q Consensus       120 l~~~~~~a~~~l~~~~~~-~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  198 (325)
                      +|+........| +..++ -.|.++.|.|.+..+|.-++.++.+.|++|++.-..                   ..    
T Consensus       138 ~PcTp~av~~lL-~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~-------------------t~----  193 (284)
T PRK14190        138 LPCTPHGILELL-KEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSK-------------------TK----  193 (284)
T ss_pred             CCCCHHHHHHHH-HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCC-------------------ch----
Confidence            344333333333 43343 368999999999999999999999999999976421                   11    


Q ss_pred             HHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487          199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      .+.+.+  +..|+++-++|.+.+ ---+++++|..++++|...
T Consensus       194 ~l~~~~--~~ADIvI~AvG~p~~-i~~~~ik~gavVIDvGi~~  233 (284)
T PRK14190        194 NLAELT--KQADILIVAVGKPKL-ITADMVKEGAVVIDVGVNR  233 (284)
T ss_pred             hHHHHH--HhCCEEEEecCCCCc-CCHHHcCCCCEEEEeeccc
Confidence            122222  258999999998764 2246789999999998764

>PLN00203 glutamyl-tRNA reductase

Probab=94.86  E-value=0.24  Score=46.50  Aligned_cols=73  Identities=18%  Similarity=0.282  Sum_probs=51.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +.+|+|+|+ |.+|.+++..+...|+ +|+++.++.++.+.+. .++...+....    .+.+.+...  .+|+||.|++
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~----~~dl~~al~--~aDVVIsAT~  338 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKP----LDEMLACAA--EADVVFTSTS  338 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeec----HhhHHHHHh--cCCEEEEccC
Confidence            678999998 9999999999999997 7999999988876665 34321111000    112223332  6899999987


Q ss_pred             hH
Q 020487          218 AS  219 (325)
Q Consensus       218 ~~  219 (325)
                      ..
T Consensus       339 s~  340 (519)
T PLN00203        339 SE  340 (519)
T ss_pred             CC
Confidence            53

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=94.85  E-value=0.087  Score=46.29  Aligned_cols=72  Identities=17%  Similarity=0.258  Sum_probs=48.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +++|+|++|.+|..+++.+...|++|+++.++.++.......+... +..+-.+ .+.+.+...  ++|+||.+.+
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~D~~~-~~~l~~~~~--~~d~vi~~a~   73 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEI-VEGDLRD-PASLRKAVA--GCRALFHVAA   73 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceE-EEeeCCC-HHHHHHHHh--CCCEEEEece
Confidence            6899999999999999999999999999998766543333333332 2222222 223444433  5799998875

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02650 dihydroflavonol-4-reductase

Probab=94.85  E-value=0.16  Score=45.33  Aligned_cols=40  Identities=23%  Similarity=0.221  Sum_probs=34.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA  178 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~  178 (325)
                      ...+|||+|++|-+|..++..+...|.+|++++++.....
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~   43 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVK   43 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhH
Confidence            3568999999999999999999999999999887765443

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=94.84  E-value=0.097  Score=45.16  Aligned_cols=92  Identities=13%  Similarity=0.196  Sum_probs=57.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCE-EEeCCCchHHHHHHHHh----CCCc-ccEEEeC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVARVKEET----GGKG-VDVILDC  215 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~----~~~~-~d~vi~~  215 (325)
                      +|+|+|++|.+|..+++.+...|.+|.+++|+.++..   ..+... ..|..+..   .+.+..    +-.+ +|.++-+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~---~l~~a~~~~~~~~g~~d~v~~~   74 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDED---TWDNPFSSDDGMEPEISAVYLV   74 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHH---HHHHHHhcccCcCCceeEEEEe
Confidence            4899999999999999999989999999999876542   122221 22333332   223322    1135 8888877


Q ss_pred             CCh-----HHHHHhhccccCCC--EEEEEec
Q 020487          216 MGA-----SYFQRNLGSLNIDG--RLFIIGT  239 (325)
Q Consensus       216 ~g~-----~~~~~~~~~l~~~g--~~v~~g~  239 (325)
                      .+.     .....+++..+..|  ++|.++.
T Consensus        75 ~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss  105 (285)
T TIGR03649        75 APPIPDLAPPMIKFIDFARSKGVRRFVLLSA  105 (285)
T ss_pred             CCCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence            653     12334444444333  6777654

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK06123 short chain dehydrogenase; Provisional

Probab=94.83  E-value=0.23  Score=41.72  Aligned_cols=79  Identities=14%  Similarity=0.275  Sum_probs=46.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cChhhHHH----HHHcCCCE-EE--eCCCch-HHHHHHHHh-CCCcc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAV----CKDLGADV-CI--NYKTED-FVARVKEET-GGKGV  209 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~-~~~~~~~~----~~~~g~~~-~~--~~~~~~-~~~~~~~~~-~~~~~  209 (325)
                      +.+++|+|++|.+|..+++.+...|++|+... +++++...    ++..+... .+  |-.+.. ....+.+.. ....+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            45799999999999999999988999988775 33333322    22334322 22  322222 222222111 11268


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |+++.+.|.
T Consensus        82 d~li~~ag~   90 (248)
T PRK06123         82 DALVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999998874

>PLN02583 cinnamoyl-CoA reductase

Probab=94.80  E-value=0.29  Score=42.54  Aligned_cols=37  Identities=16%  Similarity=0.196  Sum_probs=32.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      +++.+++|+|++|.+|..++..+...|++|+++.++.
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~   40 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKN   40 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCc
Confidence            3567899999999999999999999999999998753

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.79  E-value=0.31  Score=41.71  Aligned_cols=77  Identities=17%  Similarity=0.268  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+++|.|.+..+|.-+++++...|++|++.-..                   +.+.    .+.+  +.+|+++-++|.
T Consensus       155 ~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~-------------------T~~l----~~~~--~~ADIvI~AvG~  209 (282)
T PRK14169        155 AGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSK-------------------TRNL----KQLT--KEADILVVAVGV  209 (282)
T ss_pred             CCCEEEEECCCccchHHHHHHHHHCCCEEEEECCC-------------------CCCH----HHHH--hhCCEEEEccCC
Confidence            58999999999999999999999999999876422                   1111    2222  257999999998


Q ss_pred             HHHHHhhccccCCCEEEEEeccC
Q 020487          219 SYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       219 ~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      +.+- --+++++|..++.+|...
T Consensus       210 p~~i-~~~~vk~GavVIDvGin~  231 (282)
T PRK14169        210 PHFI-GADAVKPGAVVIDVGISR  231 (282)
T ss_pred             cCcc-CHHHcCCCcEEEEeeccc
Confidence            7752 246899999999998754

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=94.77  E-value=0.072  Score=41.56  Aligned_cols=85  Identities=15%  Similarity=0.162  Sum_probs=53.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCC------CEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA------DVCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      +|.|+|+ |.+|.+++..+...|.+|+...++++..+.+++-+.      +..+..+- ....++.+..  ++.|+++-+
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i-~~t~dl~~a~--~~ad~Iiia   76 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENI-KATTDLEEAL--EDADIIIIA   76 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTE-EEESSHHHHH--TT-SEEEE-
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCccc-ccccCHHHHh--CcccEEEec
Confidence            5889998 999999999999999999999999988777764221      11111110 0111223333  267999999


Q ss_pred             CChHHHHHhhccccC
Q 020487          216 MGASYFQRNLGSLNI  230 (325)
Q Consensus       216 ~g~~~~~~~~~~l~~  230 (325)
                      +........++.+++
T Consensus        77 vPs~~~~~~~~~l~~   91 (157)
T PF01210_consen   77 VPSQAHREVLEQLAP   91 (157)
T ss_dssp             S-GGGHHHHHHHHTT
T ss_pred             ccHHHHHHHHHHHhh
Confidence            998665555544444

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=94.74  E-value=0.096  Score=44.04  Aligned_cols=43  Identities=33%  Similarity=0.390  Sum_probs=37.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHH
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV  179 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~  179 (325)
                      ..++.+++|+|++|.+|..+++.+...|++|++++++.++.+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~   51 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEA   51 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHH
Confidence            4578899999999999999999998899999999988765433

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=94.73  E-value=0.14  Score=46.09  Aligned_cols=76  Identities=12%  Similarity=0.055  Sum_probs=47.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      ..+.+|||+|++|-+|..++..+...|.+|+++++..........++. ..+..+..+ ...+.....  ++|+||.+++
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~-~~~~~Dl~d-~~~~~~~~~--~~D~Vih~Aa   94 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCH-EFHLVDLRV-MENCLKVTK--GVDHVFNLAA   94 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccc-eEEECCCCC-HHHHHHHHh--CCCEEEEccc
Confidence            467899999999999999999999999999999875322110001111 222222222 122333332  5899999874

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.73  E-value=0.3  Score=41.81  Aligned_cols=95  Identities=15%  Similarity=0.143  Sum_probs=65.6

Q ss_pred             CcchHHHHHHHHHhhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHH
Q 020487          120 FPEVACTVWSTVFMTSHL-SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA  198 (325)
Q Consensus       120 l~~~~~~a~~~l~~~~~~-~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  198 (325)
                      +|+........| +.-++ -.|.+++|.|.+..+|.-++.++...|++|++.-....                   +.  
T Consensus       138 ~PcTp~aii~lL-~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~-------------------dl--  195 (282)
T PRK14180        138 ESCTPKGIMTML-REYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT-------------------DL--  195 (282)
T ss_pred             CCCCHHHHHHHH-HHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCC-------------------CH--
Confidence            444333334334 33233 35899999999999999999999999999977652211                   11  


Q ss_pred             HHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487          199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                        .+.+  +..|+++-++|.+.+-. -+++++|..++.+|...
T Consensus       196 --~~~~--k~ADIvIsAvGkp~~i~-~~~vk~gavVIDvGin~  233 (282)
T PRK14180        196 --KSHT--TKADILIVAVGKPNFIT-ADMVKEGAVVIDVGINH  233 (282)
T ss_pred             --HHHh--hhcCEEEEccCCcCcCC-HHHcCCCcEEEEecccc
Confidence              1122  25899999999877522 37889999999998653

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.72  E-value=0.36  Score=46.07  Aligned_cols=93  Identities=11%  Similarity=0.109  Sum_probs=66.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  220 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~  220 (325)
                      +.++|.|. |.+|..+++.++..|.++++++.++++.+.+++.|...+. .+..+  .+..+..+-+.+|.++-+.+++.
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~-GD~~~--~~~L~~a~i~~a~~viv~~~~~~  493 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVL-GNAAN--EEIMQLAHLDCARWLLLTIPNGY  493 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEE-cCCCC--HHHHHhcCccccCEEEEEcCChH
Confidence            57899998 9999999999999999999999999999999888765443 33322  23344455557898887766532


Q ss_pred             ----HHHhhccccCCCEEEEE
Q 020487          221 ----FQRNLGSLNIDGRLFII  237 (325)
Q Consensus       221 ----~~~~~~~l~~~g~~v~~  237 (325)
                          +-...+...++-+++..
T Consensus       494 ~~~~iv~~~~~~~~~~~iiar  514 (558)
T PRK10669        494 EAGEIVASAREKRPDIEIIAR  514 (558)
T ss_pred             HHHHHHHHHHHHCCCCeEEEE
Confidence                22233445566666665

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=94.72  E-value=0.21  Score=41.77  Aligned_cols=78  Identities=19%  Similarity=0.255  Sum_probs=47.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecChhhHHHH----HHcCCC-EEE--eCCCchHHHHH-HHHh-CCCccc
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVC----KDLGAD-VCI--NYKTEDFVARV-KEET-GGKGVD  210 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~-~~~~~~~~~~----~~~g~~-~~~--~~~~~~~~~~~-~~~~-~~~~~d  210 (325)
                      .+++|+|++|.+|..++..+...|++|+++ .++.++.+..    +..+.. ..+  |-.+......+ .+.. ...++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            368999999999999999999999999875 4555443322    223322 222  33332222222 2221 123689


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      +++.+.|.
T Consensus        82 ~vi~~ag~   89 (247)
T PRK09730         82 ALVNNAGI   89 (247)
T ss_pred             EEEECCCC
Confidence            99999874

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=94.72  E-value=0.049  Score=44.48  Aligned_cols=99  Identities=15%  Similarity=0.203  Sum_probs=63.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHH----HcCCC---EEEeCCCchHHHHHHHHhCCC
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGAD---VCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~----~~g~~---~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      .....+||-+|  +.+|++++.+|+.+  +.+|+.+..+++..+.++    ..|..   .++..+.......+.+.....
T Consensus        43 ~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gda~~~l~~l~~~~~~~  120 (205)
T PF01596_consen   43 LTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGDALEVLPELANDGEEG  120 (205)
T ss_dssp             HHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-HHHHHHHHHHTTTTT
T ss_pred             hcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEeccHhhHHHHHhccCCC
Confidence            35567899999  46799999999887  579999999998776664    34532   233333322223332222223


Q ss_pred             cccEEEeCCC-h---HHHHHhhccccCCCEEEEE
Q 020487          208 GVDVILDCMG-A---SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       208 ~~d~vi~~~g-~---~~~~~~~~~l~~~g~~v~~  237 (325)
                      .||+||-=.. .   ..+..+++.|++||.++.=
T Consensus       121 ~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D  154 (205)
T PF01596_consen  121 QFDFVFIDADKRNYLEYFEKALPLLRPGGVIIAD  154 (205)
T ss_dssp             SEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ceeEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence            6999974333 3   2366778899999988863

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=94.71  E-value=0.035  Score=47.90  Aligned_cols=67  Identities=24%  Similarity=0.235  Sum_probs=45.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      |||+|++|-+|..+++.+...|++|++++++..........+   +.+....    ...+..  .++|+|+.|++.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~----~~~~~~--~~~D~Vvh~a~~   67 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG---YKPWAPL----AESEAL--EGADAVINLAGE   67 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee---eeccccc----chhhhc--CCCCEEEECCCC
Confidence            589999999999999999889999999998876543222111   1111111    112222  368999999873

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK07340 ornithine cyclodeaminase; Validated

Probab=94.71  E-value=0.36  Score=42.14  Aligned_cols=101  Identities=15%  Similarity=0.100  Sum_probs=66.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-CCC-EEEEEecChhhHHHHH-HcCCC--EEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKC-QGV-RVFVTAGSEEKLAVCK-DLGAD--VCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~-~g~-~v~~~~~~~~~~~~~~-~~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      ....+++|+|+ |..|.+.+..+.. .+. +|.+..++.++.+.+. ++...  .+.   ..+.    .+..  ..+|+|
T Consensus       123 ~~~~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~---~~~~----~~av--~~aDiV  192 (304)
T PRK07340        123 APPGDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE---PLDG----EAIP--EAVDLV  192 (304)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE---ECCH----HHHh--hcCCEE
Confidence            45678999998 9999888888764 565 7999999888765543 33211  111   1111    2222  268999


Q ss_pred             EeCCChHH-HHHhhccccCCCEEEEEeccCCcccccchH
Q 020487          213 LDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNIT  250 (325)
Q Consensus       213 i~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~  250 (325)
                      +.|+++.. +..  .+++||-.+..+|.......+++..
T Consensus       193 itaT~s~~Pl~~--~~~~~g~hi~~iGs~~p~~~El~~~  229 (304)
T PRK07340        193 VTATTSRTPVYP--EAARAGRLVVAVGAFTPDMAELAPR  229 (304)
T ss_pred             EEccCCCCceeC--ccCCCCCEEEecCCCCCCcccCCHH
Confidence            99988643 222  2478999999998776555555543

>TIGR00477 tehB tellurite resistance protein TehB

Probab=94.71  E-value=0.081  Score=42.95  Aligned_cols=96  Identities=15%  Similarity=0.097  Sum_probs=57.1

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCCEEEeCCCchHHHHHHHHhCCCc
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKG  208 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~  208 (325)
                      ......++.+||-.|+  +.|..+..+++ .|.+|++++.++...+.+++    .+......  ..+.. ..  .. ...
T Consensus        24 ~~~~~~~~~~vLDiGc--G~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~--~~d~~-~~--~~-~~~   94 (195)
T TIGR00477        24 EAVKTVAPCKTLDLGC--GQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLPLRTD--AYDIN-AA--AL-NED   94 (195)
T ss_pred             HHhccCCCCcEEEeCC--CCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCCceeE--eccch-hc--cc-cCC
Confidence            3334455678999986  45777777776 48899999999887665543    22221110  00100 00  01 236


Q ss_pred             ccEEEeCC-----Ch----HHHHHhhccccCCCEEEEE
Q 020487          209 VDVILDCM-----GA----SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       209 ~d~vi~~~-----g~----~~~~~~~~~l~~~g~~v~~  237 (325)
                      +|+|+.+.     ..    ..+..+.+.|+|||.++.+
T Consensus        95 fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~  132 (195)
T TIGR00477        95 YDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIV  132 (195)
T ss_pred             CCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence            99997652     21    2356777889999996554

Part of a tellurite-reducing operon tehA and tehB

>PRK06849 hypothetical protein; Provisional

Probab=94.71  E-value=0.38  Score=43.61  Aligned_cols=96  Identities=8%  Similarity=0.130  Sum_probs=62.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEEEeC---CCchHHHHHHHHhCCCcccEEEe
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINY---KTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~---~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      ...+|||+|+....|+.+++.++..|.+|++++.++........ ......++.   +...+.+.+.+.....++|+++-
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~vIP   82 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLLIP   82 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Confidence            35789999998889999999999999999999977654432222 111122321   22345677777766668999998


Q ss_pred             CCChHH-HHHhhccccCCCEE
Q 020487          215 CMGASY-FQRNLGSLNIDGRL  234 (325)
Q Consensus       215 ~~g~~~-~~~~~~~l~~~g~~  234 (325)
                      +..... +....+.+.++.++
T Consensus        83 ~~e~~~~~a~~~~~l~~~~~v  103 (389)
T PRK06849         83 TCEEVFYLSHAKEELSAYCEV  103 (389)
T ss_pred             CChHHHhHHhhhhhhcCCcEE
Confidence            876542 23334455555443

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=94.69  E-value=0.18  Score=42.79  Aligned_cols=93  Identities=25%  Similarity=0.252  Sum_probs=60.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHHhCCCccc
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      .++.+||-.|+  +.|..+..+++. |.+|++++.+++..+.+++    .|..   .++..+..    .+... ....||
T Consensus        43 ~~~~~vLDiGc--G~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~----~l~~~-~~~~fD  114 (255)
T PRK11036         43 PRPLRVLDAGG--GEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQ----DIAQH-LETPVD  114 (255)
T ss_pred             CCCCEEEEeCC--CchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHH----HHhhh-cCCCCC
Confidence            45678998886  467777777775 8899999999988877664    2321   12221111    12111 234799


Q ss_pred             EEEeCCC-----h--HHHHHhhccccCCCEEEEEe
Q 020487          211 VILDCMG-----A--SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       211 ~vi~~~g-----~--~~~~~~~~~l~~~g~~v~~g  238 (325)
                      +|+....     .  ..+..+.+.|+|||.++.+-
T Consensus       115 ~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (255)
T PRK11036        115 LILFHAVLEWVADPKSVLQTLWSVLRPGGALSLMF  149 (255)
T ss_pred             EEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            9985432     1  23677789999999998763

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.69  E-value=0.21  Score=39.01  Aligned_cols=80  Identities=19%  Similarity=0.140  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeC-CCchHHHHHHHHhC-CCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETG-GKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~-~~~~d~vi~~~  216 (325)
                      .|..|+++|+..++|...++-+...|++|+++.|+++.+..+-+.-...+..- -+.+-++.+.+... -..+|..++..
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNA   85 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNNA   85 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhccc
Confidence            47889999998999999999999999999999999998866543222222111 11122444454433 23457777776


Q ss_pred             Ch
Q 020487          217 GA  218 (325)
Q Consensus       217 g~  218 (325)
                      |.
T Consensus        86 gv   87 (245)
T KOG1207|consen   86 GV   87 (245)
T ss_pred             hh
Confidence            65

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=94.67  E-value=0.22  Score=41.17  Aligned_cols=99  Identities=19%  Similarity=0.130  Sum_probs=59.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE---------EEeCCC-chHHHHHHHHh
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV---------CINYKT-EDFVARVKEET  204 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~---------~~~~~~-~~~~~~~~~~~  204 (325)
                      .+.++.+||+.|+  +.|.-+..+|. .|++|++++.++...+.+. +.+...         ...... ..+..++.+..
T Consensus        34 ~~~~~~rvL~~gC--G~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~  110 (218)
T PRK13255         34 ALPAGSRVLVPLC--GKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALT  110 (218)
T ss_pred             CCCCCCeEEEeCC--CChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCC
Confidence            3456789999996  46777777775 6999999999999887653 322210         000000 00011111110


Q ss_pred             --CCCcccEEEeCCC-----h----HHHHHhhccccCCCEEEEE
Q 020487          205 --GGKGVDVILDCMG-----A----SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       205 --~~~~~d~vi~~~g-----~----~~~~~~~~~l~~~g~~v~~  237 (325)
                        ....||.++|...     .    ..+..+.+.|+|||+++++
T Consensus       111 ~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~  154 (218)
T PRK13255        111 AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV  154 (218)
T ss_pred             cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence              1126899998653     1    2356778899999975544

>PRK00811 spermidine synthase; Provisional

Probab=94.60  E-value=0.35  Score=41.76  Aligned_cols=94  Identities=21%  Similarity=0.272  Sum_probs=59.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHc-C-----C--C---EEEeCCCchHHHHHHHHhC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDL-G-----A--D---VCINYKTEDFVARVKEETG  205 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~-g-----~--~---~~~~~~~~~~~~~~~~~~~  205 (325)
                      .+.++||++|+  +.|..+..+++..+. +|++++.+++-.+.+++. .     .  +   .++..+.   ...+.+  .
T Consensus        75 ~~p~~VL~iG~--G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da---~~~l~~--~  147 (283)
T PRK00811         75 PNPKRVLIIGG--GDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDG---IKFVAE--T  147 (283)
T ss_pred             CCCCEEEEEec--CchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECch---HHHHhh--C
Confidence            34678999996  347777788887665 899999998877777642 1     1  1   1222222   222222  2


Q ss_pred             CCcccEEEeCCCh-----------HHHHHhhccccCCCEEEEEe
Q 020487          206 GKGVDVILDCMGA-----------SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       206 ~~~~d~vi~~~g~-----------~~~~~~~~~l~~~g~~v~~g  238 (325)
                      .+.||+|+--...           +.+..+.+.|+++|.++...
T Consensus       148 ~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~  191 (283)
T PRK00811        148 ENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS  191 (283)
T ss_pred             CCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence            3479999864321           12456678999999998753

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=94.60  E-value=0.2  Score=35.96  Aligned_cols=86  Identities=19%  Similarity=0.247  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+|||.|+ |.+|..-++.+...|++|+++....   ...+  +.-....   ..+.    +.  -.++++|+.+.+.
T Consensus         6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~~--~~i~~~~---~~~~----~~--l~~~~lV~~at~d   70 (103)
T PF13241_consen    6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFSE--GLIQLIR---REFE----ED--LDGADLVFAATDD   70 (103)
T ss_dssp             TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHHH--TSCEEEE---SS-G----GG--CTTESEEEE-SS-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhhh--hHHHHHh---hhHH----HH--HhhheEEEecCCC
Confidence            4789999998 9999999999999999999999775   2222  1111221   1111    11  2368999999998


Q ss_pred             HHHH-HhhccccCCCEEEEEec
Q 020487          219 SYFQ-RNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 ~~~~-~~~~~l~~~g~~v~~g~  239 (325)
                      +.+. .+....+.-+.++....
T Consensus        71 ~~~n~~i~~~a~~~~i~vn~~D   92 (103)
T PF13241_consen   71 PELNEAIYADARARGILVNVVD   92 (103)
T ss_dssp             HHHHHHHHHHHHHTTSEEEETT
T ss_pred             HHHHHHHHHHHhhCCEEEEECC
Confidence            7764 44455566777776644

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=94.59  E-value=0.094  Score=45.40  Aligned_cols=32  Identities=28%  Similarity=0.335  Sum_probs=29.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      +|||+|++|.+|.++...++..|.+|+.+.+.
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~   33 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS   33 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch
Confidence            69999999999999999999999999999755

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.57  E-value=0.44  Score=40.71  Aligned_cols=77  Identities=17%  Similarity=0.225  Sum_probs=57.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.++.|+|-+..+|..++.++...|++|+.......                       .+.+.+.  .+|+++.++|.
T Consensus       151 ~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~-----------------------~L~~~~~--~ADIvI~Avgk  205 (279)
T PRK14178        151 AGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTE-----------------------NLKAELR--QADILVSAAGK  205 (279)
T ss_pred             CCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChh-----------------------HHHHHHh--hCCEEEECCCc
Confidence            5899999999889999999999999999988774321                       2222222  58999999996


Q ss_pred             HHHHHhhccccCCCEEEEEeccC
Q 020487          219 SYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       219 ~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      +.+ -.-+.+++|..++++|...
T Consensus       206 ~~l-v~~~~vk~GavVIDVgi~~  227 (279)
T PRK14178        206 AGF-ITPDMVKPGATVIDVGINQ  227 (279)
T ss_pred             ccc-cCHHHcCCCcEEEEeeccc
Confidence            543 1134579999999998653

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.56  E-value=0.13  Score=38.20  Aligned_cols=89  Identities=9%  Similarity=0.074  Sum_probs=53.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChh-hHHHHH-Hc----CCCE-EEeCCCchHHHHHHHHhCCCcccEEE
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEE-KLAVCK-DL----GADV-CINYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~-~~~~~~-~~----g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                      +|.|+|++|-+|..+++++..+ .++++.+..+.. .-..+. ..    +... .+....   ...+      ...|++|
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~------~~~Dvvf   71 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDAD---PEEL------SDVDVVF   71 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETS---GHHH------TTESEEE
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecc---hhHh------hcCCEEE
Confidence            5899999999999999999887 457666554444 211121 11    1211 121111   1111      3799999


Q ss_pred             eCCChHHHHHhhcc-ccCCCEEEEEec
Q 020487          214 DCMGASYFQRNLGS-LNIDGRLFIIGT  239 (325)
Q Consensus       214 ~~~g~~~~~~~~~~-l~~~g~~v~~g~  239 (325)
                      .|.+.......... ++.|-++++.+.
T Consensus        72 ~a~~~~~~~~~~~~~~~~g~~ViD~s~   98 (121)
T PF01118_consen   72 LALPHGASKELAPKLLKAGIKVIDLSG   98 (121)
T ss_dssp             E-SCHHHHHHHHHHHHHTTSEEEESSS
T ss_pred             ecCchhHHHHHHHHHhhCCcEEEeCCH
Confidence            99998776555444 566667887754

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=94.56  E-value=0.16  Score=44.24  Aligned_cols=76  Identities=18%  Similarity=0.128  Sum_probs=44.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCh--hhHHHHHHcC---CCEEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSE--EKLAVCKDLG---ADVCINYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~--~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      +|+|+|++|.+|..+++.+...|  .+|+++.+..  .+.+.+.++.   ...++..+-.+ .+.+.+...+..+|+||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~d~vi~   79 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGD-RELVSRLFTEHQPDAVVH   79 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcC-HHHHHHHHhhcCCCEEEE
Confidence            48999999999999999887766  6888876532  1222222221   11223222111 223333333335899999


Q ss_pred             CCCh
Q 020487          215 CMGA  218 (325)
Q Consensus       215 ~~g~  218 (325)
                      +++.
T Consensus        80 ~a~~   83 (317)
T TIGR01181        80 FAAE   83 (317)
T ss_pred             cccc
Confidence            9863

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=94.56  E-value=0.19  Score=43.90  Aligned_cols=95  Identities=13%  Similarity=0.156  Sum_probs=59.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHc-CCCEEEeCCCchHHHHHHHH--hCCCcccEEEeCCC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-GADVCINYKTEDFVARVKEE--TGGKGVDVILDCMG  217 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~--~~~~~~d~vi~~~g  217 (325)
                      .+|+|+|+ |++|...+..+...|.+|+.+.+..++.+..++. |. .+.+....... .....  .....+|++|-|+=
T Consensus         3 m~I~IiGa-GaiG~~~a~~L~~~G~~V~lv~r~~~~~~~i~~~~Gl-~i~~~g~~~~~-~~~~~~~~~~~~~D~viv~vK   79 (305)
T PRK05708          3 MTWHILGA-GSLGSLWACRLARAGLPVRLILRDRQRLAAYQQAGGL-TLVEQGQASLY-AIPAETADAAEPIHRLLLACK   79 (305)
T ss_pred             ceEEEECC-CHHHHHHHHHHHhCCCCeEEEEechHHHHHHhhcCCe-EEeeCCcceee-ccCCCCcccccccCEEEEECC
Confidence            36999998 9999988888888899999999988777777643 32 22111110000 00000  01136899998876


Q ss_pred             hHHH----HHhhccccCCCEEEEEe
Q 020487          218 ASYF----QRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       218 ~~~~----~~~~~~l~~~g~~v~~g  238 (325)
                      ...+    ..+...+.++..++.+.
T Consensus        80 ~~~~~~al~~l~~~l~~~t~vv~lQ  104 (305)
T PRK05708         80 AYDAEPAVASLAHRLAPGAELLLLQ  104 (305)
T ss_pred             HHhHHHHHHHHHhhCCCCCEEEEEe
Confidence            5443    34445567777777764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	325
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		3e-79
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		3e-66
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		3e-66
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		4e-43
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		1e-37
1qor_A	327	Crystal Structure Of Escherichia Coli Quinone Oxido		4e-35
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		3e-31
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		4e-31
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		7e-30
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		2e-27
1iyz_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		1e-26
4eye_A	342	Crystal Structure Of A Probable Oxidoreductase From		9e-25
2cf2_D	295	Architecture Of Mammalian Fatty Acid Synthase Lengt		1e-24
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		1e-24
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		2e-24
2vz8_A	2512	Crystal Structure Of Mammalian Fatty Acid Synthase		3e-23
1iz0_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		3e-22
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		7e-20
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		7e-20
3gaz_A	343	Crystal Structure Of An Alcohol Dehydrogenase Super		8e-20
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		8e-20
3slk_A	795	Structure Of Ketoreductase And Enoylreductase Didom		4e-19
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		6e-19
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		7e-19
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		9e-19
3gms_A	340	Crystal Structure Of Putative Nadph:quinone Reducta		9e-18
1pqw_A	198	Putative Enoyl Reductase Domain Of Polyketide Synth		2e-17
4a0s_A	447	Structure Of The 2-Octenoyl-Coa Carboxylase Reducta		3e-17
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		3e-17
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		2e-16
2vn8_A	375	Crystal Structure Of Human Reticulon 4 Interacting		8e-16
3hzz_A	467	2.4 Angstrom Crystal Structure Of Streptomyces Coll		7e-15
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		1e-14
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		1e-14
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		3e-14
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		8e-14
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		1e-13
3krt_A	456	Crystal Structure Of Putative Crotonyl Coa Reductas		2e-13
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		3e-13
3gqv_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant		2e-11
3b6z_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Comple		2e-11
2vcy_A	344	Crystal Structure Of 2-Enoyl Thioester Reductase Of		1e-10
1zsy_A	357	The Structure Of Human Mitochondrial 2-Enoyl Thioes		1e-10
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		3e-10
1n9g_A	386	Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr		6e-10
1h0k_A	364	Enoyl Thioester Reductase 2 Length = 364		7e-10
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		7e-10
1n9g_B	386	Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr		1e-09
1gu7_A	364	Enoyl Thioester Reductase From Candida Tropicalis L		1e-09
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		1e-09
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		3e-09
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		3e-09
4b7c_A	336	Crystal Structure Of Hypothetical Protein Pa1648 Fr		4e-09
4dvj_A	363	Crystal Structure Of A Putative Zinc-Dependent Alco		5e-09
3pi7_A	349	Crystal Structure Of A Putative Nadph:quinone Reduc		7e-09
1gyr_A	364	Mutant Form Of Enoyl Thioester Reductase From Candi		1e-08
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		3e-08
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		3e-08
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		3e-08
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		3e-08
3nx4_A	324	Crystal Structure Of The Yhdh Oxidoreductase From S		7e-08
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		2e-07
1xa0_A	328	Crystal Structure Of Mcsg Target Apc35536 From Baci		3e-07
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		5e-07
1o89_A	345	Crystal Structure Of E. Coli K-12 Yhdh Length = 345		1e-06
3iup_A	379	Crystal Structure Of Putative Nadph:quinone Oxidore		1e-06
3ip1_A	404	Structure Of Putative Alcohol Dehydrogenase (Tm_042		2e-06
2j3h_A	345	Crystal Structure Of Arabidopsis Thaliana Double Bo		2e-06
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		5e-06
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		8e-06
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		2e-05
1tt7_A	330	Crystal Structure Of Bacillus Subtilis Protein Yhfp		1e-05
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		1e-05
2zb3_A	353	Crystal Structure Of Mouse 15-Ketoprostaglandin Del		2e-05
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		3e-05
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		3e-05
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		3e-05
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		3e-05
4hfj_A	351	X-ray Crystal Structure Of A Double Bond Reductase		5e-05
3goh_A	315	Crystal Structure Of Alcohol Dehydrogenase Superfam		9e-05
1vj1_A	363	Crystal Structure Of Putative Nadph-Dependent Oxido		1e-04
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		3e-04
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		3e-04
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		3e-04
2zb4_A	357	Crystal Structure Of Human 15-Ketoprostaglandin Del		4e-04
2w4q_A	357	Crystal Structure Of Human Zinc-Binding Alcohol Deh		4e-04
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		6e-04

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score =  291 bits (745), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 152/315 (48%), Positives = 200/315 (63%), Gaps = 2/315 (0%)
Query: 10  GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTI 69
           G P+V  + +   P   + EVL++ EA  +NR D  QR+GSYPPPK ASP  GLE SG I
Sbjct: 38  GGPDVXVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEI 97
Query: 70  LSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWS 129
           + VG  VS + VGD+VC L  GG YAE   +PAGQ+LP P G     AAA PE   TVW+
Sbjct: 98  VGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWA 157
Query: 130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI 189
            +F  + L+ GES L+HGG+SGIGT AIQ+ +  G  V+ TAGS  K   C+ LGA   I
Sbjct: 158 NLFQXAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGI 217
Query: 190 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTE-LN 248
           NY++EDF A +K ET G+GVD+ILD +GA+YF+RN+ SL  DG L II   GGA  E +N
Sbjct: 218 NYRSEDFAAVIKAET-GQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAVAEKVN 276
Query: 249 ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEA 308
           ++ +  KRLTV  +  R R+ E K  I  ++   VWP +  G V PVI+K     + A+A
Sbjct: 277 LSPIXVKRLTVTGSTXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVADA 336
Query: 309 HQLMESSQHIGKIML 323
           H+L+E   H+GK+ L
Sbjct: 337 HRLLEEGSHVGKVXL 351

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score =  248 bits (634), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 134/328 (40%), Positives = 198/328 (60%), Gaps = 5/328 (1%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M A+   +PG PE L ++EV  P   + EVL+KV A+ALNRAD +QR+G Y PP GAS  
Sbjct: 23  MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 82
Query: 61  PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
            GLE SG +  +G      WK+GD   ALL GGG A+ V VP G ++P+P G++L  AAA
Sbjct: 83  LGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 142
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
            PE   T +  + +  ++  G+  L+H G SG+GT AIQ+ +  G    VTAGS++KL +
Sbjct: 143 IPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM 202
Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
            + LGA    NYK EDF     + T G GV++ILDC+G SY+++N+  L +DGR  + G 
Sbjct: 203 AEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGL 262
Query: 240 QGGAKTELNITS-LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV---GKVKPV 295
            GG      + S L  KR ++  + LRSR  + K ++V+   + + P  +     ++ PV
Sbjct: 263 MGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPV 322
Query: 296 IYKYLPLCEAAEAHQLMESSQHIGKIML 323
           + +  P+ E  EAH+ ME++++IGKI+L
Sbjct: 323 LDRIYPVTEIQEAHKYMEANKNIGKIVL 350

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score =  248 bits (633), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 134/328 (40%), Positives = 198/328 (60%), Gaps = 5/328 (1%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M A+   +PG PE L ++EV  P   + EVL+KV A+ALNRAD +QR+G Y PP GAS  
Sbjct: 7   MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 66
Query: 61  PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
            GLE SG +  +G      WK+GD   ALL GGG A+ V VP G ++P+P G++L  AAA
Sbjct: 67  LGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 126
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
            PE   T +  + +  ++  G+  L+H G SG+GT AIQ+ +  G    VTAGS++KL +
Sbjct: 127 IPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM 186
Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
            + LGA    NYK EDF     + T G GV++ILDC+G SY+++N+  L +DGR  + G 
Sbjct: 187 AEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGL 246
Query: 240 QGGAKTELNITS-LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV---GKVKPV 295
            GG      + S L  KR ++  + LRSR  + K ++V+   + + P  +     ++ PV
Sbjct: 247 MGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPV 306
Query: 296 IYKYLPLCEAAEAHQLMESSQHIGKIML 323
           + +  P+ E  EAH+ ME++++IGKI+L
Sbjct: 307 LDRIYPVTEIQEAHKYMEANKNIGKIVL 334

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score =  171 bits (434), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/350 (33%), Positives = 173/350 (49%), Gaps = 37/350 (10%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+V+   G PEVL++ ++  P+    EV ++++A ALN  D   RKG   P       
Sbjct: 1   MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHV 60
Query: 61  PGLECSGTILSVGKNVSRWKVGDQVC------------------------ALLG---GGG 93
            G + SG + +VG  V  +  GD+V                          +LG    G 
Sbjct: 61  LGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGT 120
Query: 94  YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIG 153
           YAE V +P   + P P  +S ++AAA P    T W  V     + PG+  LV    SG+ 
Sbjct: 121 YAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVS 180
Query: 154 TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213
             AIQ+ K  G RV  TAGSE+KL   K LGAD  +NY   D+   V+  TGGKG D ++
Sbjct: 181 VAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVV 240
Query: 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA 273
           D  GA YF+  + +    GR+ I G   G +  L    +F ++L++  + + S+S     
Sbjct: 241 DHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFP- 299
Query: 274 LIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323
            I+  VE+        GK+KPV+ + LPL  AAE H+L+E  +  GK++L
Sbjct: 300 -ILRFVEE--------GKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVL 340

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score =  153 bits (386), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 173/328 (52%), Gaps = 11/328 (3%)
Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+A+ + + G PEVL+L+ ++  P  KD +VLIKV A  +N  +T  R G+Y   K   P
Sbjct: 30  MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR-KPLLP 88
Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
           Y PG + +G I +VG N S +K GD+V  +    GGYAE        V  +P  +  K  
Sbjct: 89  YTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQG 148
Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
           AA      T +  +  ++ +  GES LVHG S G+G  A Q+ +  G+++  TAG+EE  
Sbjct: 149 AAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ 208
Query: 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
            +    GA    N++  +++ ++K+  G KG+D+I++ +      ++L  L+  GR+ ++
Sbjct: 209 KIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVV 268
Query: 238 GTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIY 297
           G++G    E+N     AK  ++    L S + E       +    +   + +G +KPVI 
Sbjct: 269 GSRG--TIEINPRDTMAKESSIIGVTLFSSTKEE----FQQYAAALQAGMEIGWLKPVIG 322
Query: 298 KYLPLCEAAEAHQ-LMESSQHIGKIMLV 324
              PL + AEAH+ ++  S   GK++L+
Sbjct: 323 SQYPLEKVAEAHENIIHGSGATGKMILL 350

>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327

Iteration: 1
 Score =  145 bits (365), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 158/327 (48%), Gaps = 9/327 (2%)
Query: 4   IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGL 63
           I   + G PEVLQ  E       ++E+ ++ +A  +N  DT  R G YPPP   S   G 
Sbjct: 5   IEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGL-GT 63
Query: 64  ECSGTILSVGKNVSRWKVGDQVC-ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122
           E +G +  VG  V   K GD+V  A    G Y+    + A +   +P+ +S + AAA   
Sbjct: 64  EAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFL 123
Query: 123 VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 182
              TV+  +  T  + P E FL H  + G+G  A Q  K  G ++  T G+ +K      
Sbjct: 124 KGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK 183
Query: 183 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGG 242
            GA   INY+ ED V R+KE TGGK V V+ D +G   ++R+L  L   G +   G   G
Sbjct: 184 AGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSG 243
Query: 243 AKTELNITSLFAK-RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVI---YK 298
           A T +N+  L  K  L V    L+   T  + L  +E    ++  IA G +K  +    K
Sbjct: 244 AVTGVNLGILNQKGSLYVTRPSLQGYITTREEL--TEASNELFSLIASGVIKVDVAEQQK 301
Query: 299 YLPLCEAAEAHQLMESSQHIGKIMLVP 325
           Y PL +A  AH+++ES    G  +L+P
Sbjct: 302 Y-PLKDAQRAHEILESRATQGSSLLIP 327

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score =  132 bits (332), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 153/335 (45%), Gaps = 19/335 (5%)
Query: 3   AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG-SYPPPKGASPYP 61
           A VI + G P+    +EV+       +V ++  A  +N  DT  R G  +P   G  P  
Sbjct: 4   AAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIV 63
Query: 62  -GLECSGTILSVGKNVSRWKVGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDA-- 117
            G E +  +  VG  V+ + VG++VC  L   G Y+++   PA +++ VP  + L D   
Sbjct: 64  VGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHL 123
Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
           A       T    +  T  + PG+  L+H  + G+G   +   +  G  V  T  +EEK 
Sbjct: 124 AGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKA 183
Query: 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
              + LG    INY T+DF   V+E TGGKGVDV+ D +G    Q++L  L   G     
Sbjct: 184 ETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAY 243
Query: 238 GTQGGAKTELNIT-------SLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 290
           G   G    + +        SLF  R  +    + +RS       + E  K ++ A+  G
Sbjct: 244 GHASGVADPIRVVEDLGVRGSLFITRPALWHY-MSNRSE------IDEGSKCLFDAVKAG 296
Query: 291 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325
            +   + K  PL EAA AH+ M   Q IG I+L+P
Sbjct: 297 VLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLP 331

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score =  131 bits (330), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 163/330 (49%), Gaps = 17/330 (5%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           K I+I + G  +V++ ++   P I ++E+LIK + T +N  ++  RKG YP  K   PY 
Sbjct: 10  KVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEK---PYV 66
Query: 62  -GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPA-GQVLPVPSGVSLKDAAA 119
            G E SGT+++ GK V+ ++VGDQV A +    +A+   + + G V+ +P G S ++   
Sbjct: 67  LGREASGTVVAKGKGVTNFEVGDQV-AYISNSTFAQYSKISSQGPVMKLPKGTSDEELKL 125
Query: 120 FPEVACTVWSTVFMTS---HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176
           +      V + +  T+   H+  G+  L+   + G+G    Q+ K +G      A ++EK
Sbjct: 126 YAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEK 185
Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236
           L + K+ GA+  IN   ED + +V + T GKGVD   D +G   F+ +L +L   G    
Sbjct: 186 LKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVS 245
Query: 237 IGTQGGAKTELNITSLFAKRLTV---QAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK 293
            G   G     +IT L  K +T+   Q  G  +   E K           +  +   K+ 
Sbjct: 246 FGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYY-----SDEFFGLVNSKKLN 300
Query: 294 PVIYKYLPLCEAAEAHQLMESSQHIGKIML 323
             IYK  PL +   A   +ES + +GK++L
Sbjct: 301 IKIYKTYPLRDYRTAAADIESRKTVGKLVL 330

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score =  127 bits (320), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 154/325 (47%), Gaps = 3/325 (0%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           K I  +  G PEVL+  + E        V+++ +A  LN  DT  R G YP P   S   
Sbjct: 3   KRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGL- 61
Query: 62  GLECSGTILSVGKNVSRWKVGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           G E +G + +VG  V+R+KVGD+V    G  G Y+E   +P   ++ +   VS + AAA 
Sbjct: 62  GAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAAL 121
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
                TV   +  T  + PGE  L H  + G+G+ A Q  K  G ++  T  S EK A  
Sbjct: 122 MLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA 181
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           K LGA   I+Y  ED   RV E T GK   V+ D +G   +  +L S+   G +   G  
Sbjct: 182 KALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNA 241
Query: 241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
            G  + +N+  + A++ +V        S  N A  +  +   ++  +A GK+K    +  
Sbjct: 242 SGPVSGVNL-GILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVDGIEQY 300
Query: 301 PLCEAAEAHQLMESSQHIGKIMLVP 325
            L +AA+A   + + +  G  +L+P
Sbjct: 301 ALKDAAKAQIELSARRTTGSTILIP 325

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 154/342 (45%), Gaps = 24/342 (7%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+V+   G    L+L     P+ +D E+ I+V+A  LN  D + R+G+   P      
Sbjct: 4   MRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLV 63
Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG ECSG + ++G +V  +++GD+V A +    +AE V  P   V  +P  +S  +AAAF
Sbjct: 64  PGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAF 123
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM-GKCQGVRVFVTAGSEEKLAV 179
           P    T +  +F  ++L  G S LVH    G+G    Q+      V VF TA + +  A+
Sbjct: 124 PMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAI 183
Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
            KD  +   +  +  D+V  VK     +GVD++LDC+      + L  L   G   + G+
Sbjct: 184 -KD--SVTHLFDRNADYVQEVK-RISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGS 239
Query: 240 QGGAKTELNITSLFAKR-LTVQAAGLRSRSTENKA-----------------LIVSEVEK 281
                 E      FAK    V+         ENK                  LI   VEK
Sbjct: 240 SNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEK 299
Query: 282 NVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323
            +       K+KPV+     L E  EA Q +    +IGK++L
Sbjct: 300 LI-GLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLIL 340

>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 155/323 (47%), Gaps = 25/323 (7%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ + G P  L+L ++ +P+ ++ EV+++VEA  LN AD L R G+Y         
Sbjct: 1   MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFI 58
Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG+E  G +            G +  AL+  GG AE+VAVP G +LP+P G+S ++AAAF
Sbjct: 59  PGMEVVGVV-----------EGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAF 107
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
           P    T +      +   PGE  LV   +  +GT A+Q+ +  G+RV   A   EKLA+ 
Sbjct: 108 PVSFLTAY-LALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP 166
Query: 181 KDLGADVCINYKTEDFVARVKEETGG-KGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
             LGA+    Y      A V E      G+D++L+  G    + +LG L   GRL  IG 
Sbjct: 167 LALGAEEAATY------AEVPERAKAWGGLDLVLEVRGKE-VEESLGLLAHGGRLVYIGA 219
Query: 240 QGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKY 299
             G    +    L  + L V    L     E    +V E    + P +   +++PV+   
Sbjct: 220 AEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGA--LVEEALGFLLPRLG-RELRPVVGPV 276
Query: 300 LPLCEAAEAHQLMESSQHIGKIM 322
            P  EA  A + +    H GK++
Sbjct: 277 FPFAEAEAAFRALLDRGHTGKVV 299

>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From Mycobacterium Abscessus Solved By Iodide Ion Sad Length = 342

Iteration: 1
 Score =  110 bits (276), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 153/326 (46%), Gaps = 6/326 (1%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAI       PE L   +VE P    + V++ V+A  +   D L  KG Y   K   P+
Sbjct: 22  MKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQL-KMEPPF 80
Query: 61  -PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
            PG+E +G + S  +  S  K GD+V A    GGYAE+VAV    +LP P  +   +A A
Sbjct: 81  VPGIETAGVVRSAPEG-SGIKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVA 139
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
                 T++        L  GE+ LV G + GIGT AIQ+ K  G +V            
Sbjct: 140 LIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEF 199
Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
            K +GAD+ +  + E +   V+E TGG GVD+++D +G   F   + +L  +GRL ++G 
Sbjct: 200 VKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGF 258
Query: 240 QGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKY 299
             G    + +  L  +  ++             A  + E +  +   +A G ++P +   
Sbjct: 259 AAGGIPTIKVNRLLLRNASLIGVAW-GEFLRTHADYLYETQAGLEKLVAEG-MRPPVSAR 316
Query: 300 LPLCEAAEAHQLMESSQHIGKIMLVP 325
           +PL E  +A Q     +  GK++LVP
Sbjct: 317 IPLSEGRQALQDFADGKVYGKMVLVP 342

>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase Length = 295

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 152/323 (47%), Gaps = 32/323 (9%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ + G P  L+L ++ +P+ ++ EV+++VEA  LN AD L R G+Y         
Sbjct: 1   MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFI 58
Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG+E  G +            G +  AL+  GG AE+VAVP G +LP+P G+S ++AAAF
Sbjct: 59  PGMEVVGVV-----------EGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAF 107
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
           P    T +      +   PGE  LV   +  +GT A+Q+ +  G+RV   A   EKLA+ 
Sbjct: 108 PVSFLTAY-LALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP 166
Query: 181 KDLGADVCINYKTEDFVARVKEETGG-KGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
             LGA+    Y      A V E      G+D++L+  G    + +LG L   GRL  I  
Sbjct: 167 LALGAEEAATY------AEVPERAKAWGGLDLVLEVRGKE-VEESLGLLAHGGRLVYIAP 219
Query: 240 QGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKY 299
                    I  L   R  +   G        +  +V E    + P +   +++PV+   
Sbjct: 220 ---------IPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLG-RELRPVVGPV 269
Query: 300 LPLCEAAEAHQLMESSQHIGKIM 322
            P  EA  A + +    H GK++
Sbjct: 270 FPFAEAEAAFRALLDRGHTGKVV 292

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 149/327 (45%), Gaps = 40/327 (12%)
Query: 7   TQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECS 66
           T+  +P  L+L E   P+  + +++++  A +LN  D L  +            P  + S
Sbjct: 33  TETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPASDXS 92
Query: 67  GTILSVGKNVSRWKVGDQVCAL---------------------LGG---GGYAEKVAVPA 102
           G + +VGK+V+R++ GD+V +                      LGG   G  +E V +P 
Sbjct: 93  GVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPE 152
Query: 103 GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKC 162
           G  +  P  +   +A+  P    T W  +    HL  G+  +V G + G+  F +Q+ K 
Sbjct: 153 GWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKA 211
Query: 163 QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQ 222
            G  V VT+ S EKL     LGAD  IN   ED+V RV   TG +G D IL+  G +   
Sbjct: 212 TGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLG 271
Query: 223 RNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGL-RSRSTENKALIVSEVEK 281
           ++L ++  DGR+ +IG   G +    +  L  K   VQ   +   R+ E+   +V  V++
Sbjct: 272 QSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALED---LVGAVDR 328
Query: 282 NVWPAIAVGKVKPVI---YKYLPLCEA 305
                     +KPVI   YK+  + EA
Sbjct: 329 L--------GLKPVIDXRYKFTEVPEA 347

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 155/331 (46%), Gaps = 29/331 (8%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGS-YPPPKGASPY 60
           KAI   Q G P+VL+L +   P+ + ++ LIKV A +LN  D   R GS +   K  +  
Sbjct: 8   KAIQFDQFGPPKVLKLVDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL 67
Query: 61  P---GLECSGTILSVGKNVSRWKVGDQVCALLGGGG----YAEKVAVPAGQVLPVPSGVS 113
           P   G + SG ++ +G +V+   +GD+V  + G       YAE V      ++     +S
Sbjct: 68  PSGLGYDFSGEVIELGSDVNNVNIGDKVXGIAGFPDHPCCYAEYVCASPDTIIQKLEKLS 127
Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173
              AA+ P    T    +   + +  G+  L+H G+ G+G  AIQ+ K +G  V  TA S
Sbjct: 128 FLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-S 185
Query: 174 EEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGR 233
           +   A  K LGA+ CINY  EDF+  +        VD ++D +G     +++  L   G 
Sbjct: 186 KRNHAFLKALGAEQCINYHEEDFLLAISTP-----VDAVIDLVGGDVGIQSIDCLKETGC 240
Query: 234 LFIIGT-QGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKV 292
           +  + T   G   E+      AK+   +A GL       K   + E+   +   ++  K+
Sbjct: 241 IVSVPTITAGRVIEV------AKQKHRRAFGLL------KQFNIEELHY-LGKLVSEDKL 287
Query: 293 KPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323
           +  I +   L EA  AH+L+E+    GK++ 
Sbjct: 288 RIEISRIFQLSEAVTAHELLETGHVRGKLVF 318

>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512

Iteration: 1
 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 130/297 (43%), Gaps = 9/297 (3%)
Query: 31   LIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG 90
            L  V  T+LN  D +   G   P      +   +C   +   G++ S    G +V  ++ 
Sbjct: 1563 LCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDAS----GRRVMGMVP 1618
Query: 91   GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS 150
              G A  V +       VPS  +L++AA+ P V  T + ++ +   + PGES L+H GS 
Sbjct: 1619 AEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSG 1678
Query: 151  GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETGG 206
            G+G  AI +   +G RVF T GS EK A  +     L      N +   F   V   T G
Sbjct: 1679 GVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAG 1738
Query: 207  KGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRS 266
            KGVD++L+ +     Q ++  L   GR   IG    +       ++F K +T     L S
Sbjct: 1739 KGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDS 1798
Query: 267  RSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323
               E  A    EV + +   I  G V+P+     P  +   A + M   +HIGK+++
Sbjct: 1799 LFEEGGA-TWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVI 1854

>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 151/322 (46%), Gaps = 25/322 (7%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           KA V+ + G P  L+L ++ +P+ ++ EV+++VEA  LN AD L R G+Y          
Sbjct: 2   KAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLXRLGAY---------- 49
Query: 62  GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP 121
            L         G  V     G +  AL+  GG AE+VAVP G +LP+P G+S ++AAAFP
Sbjct: 50  -LTRLHPPFIPGXEVVGVVEGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFP 108
Query: 122 EVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK 181
               T +      +   PGE  LV   +  +GT A+Q+ +  G+RV   A   EKLA+  
Sbjct: 109 VSFLTAY-LALKRAQARPGEKVLVQAAAGALGTAAVQVARAXGLRVLAAASRPEKLALPL 167
Query: 182 DLGADVCINYKTEDFVARVKEETGG-KGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
            LGA+    Y      A V E      G+D++L+  G    + +LG L   GRL  IG  
Sbjct: 168 ALGAEEAATY------AEVPERAKAWGGLDLVLEVRGKE-VEESLGLLAHGGRLVYIGAA 220
Query: 241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
            G    +    L  + L V    L     E    +V E    + P +   +++PV+    
Sbjct: 221 EGEVAPIPPLRLXRRNLAVLGFWLTPLLREGA--LVEEALGFLLPRLG-RELRPVVGPVF 277
Query: 301 PLCEAAEAHQLMESSQHIGKIM 322
           P  EA  A + +    H GK++
Sbjct: 278 PFAEAEAAFRALLDRGHTGKVV 299

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score = 94.4 bits (233), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 8/261 (3%)
Query: 1   MKAIVITQ--PGSPEVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
           M+ +V+T+  P   E + L ++   P   D ++L++     +N +D     G Y P    
Sbjct: 3   MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP 62
Query: 58  SPYPGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
               G E  G ++++G + S R+ VG Q  A +  G +AE   VPA    PVPS     +
Sbjct: 63  PFDIGFEGIGEVVALGLSASARYTVG-QAVAYMAPGSFAEYTVVPASIATPVPS--VKPE 119
Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176
                    T + ++     LS G+  LV   + G G FA+Q+ K     V  T  S+EK
Sbjct: 120 YLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEK 179
Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236
            A  K LG D  INYKTE     +K+E   +GVDV+ + +G + F   + +L   GRL +
Sbjct: 180 SAFLKSLGCDRPINYKTEPVGTVLKQEY-PEGVDVVYESVGGAMFDLAVDALATKGRLIV 238
Query: 237 IGTQGGAKTELNITSLFAKRL 257
           IG   G +T   ++ + A  L
Sbjct: 239 IGFISGYQTPTGLSPVKAGTL 259

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score = 94.4 bits (233), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 8/261 (3%)
Query: 1   MKAIVITQ--PGSPEVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
           M+ +V+T+  P   E + L ++   P   D ++L++     +N +D     G Y P    
Sbjct: 32  MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP 91
Query: 58  SPYPGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
               G E  G ++++G + S R+ VG Q  A +  G +AE   VPA    PVPS     +
Sbjct: 92  PFDIGFEGIGEVVALGLSASARYTVG-QAVAYMAPGSFAEYTVVPASIATPVPS--VKPE 148
Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176
                    T + ++     LS G+  LV   + G G FA+Q+ K     V  T  S+EK
Sbjct: 149 YLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEK 208
Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236
            A  K LG D  INYKTE     +K+E   +GVDV+ + +G + F   + +L   GRL +
Sbjct: 209 SAFLKSLGCDRPINYKTEPVGTVLKQEY-PEGVDVVYESVGGAMFDLAVDALATKGRLIV 267
Query: 237 IGTQGGAKTELNITSLFAKRL 257
           IG   G +T   ++ + A  L
Sbjct: 268 IGFISGYQTPTGLSPVKAGTL 288

>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily Protein From Novosphingobium Aromaticivorans Length = 343

Iteration: 1
 Score = 94.4 bits (233), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 116/224 (51%), Gaps = 17/224 (7%)
Query: 3   AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP- 61
           A V+ +   P V  L+++  PQ    +VL+++EA+  N  D   R G    P    P P 
Sbjct: 10  AAVVEEANGPFV--LRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGE--APHAQQPLPA 65
Query: 62  --GLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSL 114
             G + +GT+++VG  V  ++VGD V  L GG     G +A+  AV A  +   P+ ++ 
Sbjct: 66  ILGXDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTX 125
Query: 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174
           + A+  P V  T W  +   + +  G++ L+ GG  G+G  AIQ+   +G RVF TA   
Sbjct: 126 RQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGS 185
Query: 175 EKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMG 217
           + L   +DLGA  +  + + ED+ A   E T G+G D++ D +G
Sbjct: 186 D-LEYVRDLGATPIDASREPEDYAA---EHTAGQGFDLVYDTLG 225

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score = 94.4 bits (233), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 8/261 (3%)
Query: 1   MKAIVITQ--PGSPEVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
           M+ +V+T+  P   E + L ++   P   D ++L++     +N +D     G Y P    
Sbjct: 24  MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP 83
Query: 58  SPYPGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
               G E  G ++++G + S R+ VG Q  A +  G +AE   VPA    PVPS     +
Sbjct: 84  PFDIGFEGIGEVVALGLSASARYTVG-QAVAYMAPGSFAEYTVVPASIATPVPS--VKPE 140
Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176
                    T + ++     LS G+  LV   + G G FA+Q+ K     V  T  S+EK
Sbjct: 141 YLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEK 200
Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236
            A  K LG D  INYKTE     +K+E   +GVDV+ + +G + F   + +L   GRL +
Sbjct: 201 SAFLKSLGCDRPINYKTEPVGTVLKQEY-PEGVDVVYESVGGAMFDLAVDALATKGRLIV 259
Query: 237 IGTQGGAKTELNITSLFAKRL 257
           IG   G +T   ++ + A  L
Sbjct: 260 IGFISGYQTPTGLSPVKAGTL 280

>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795

Iteration: 1
 Score = 92.0 bits (227), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 7   TQPGSPEVLQLQEVEDPQ----IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPG 62
           T+PGS + L L  V++P     + D EV I + A  +N  D L   G YP   G +   G
Sbjct: 216 TRPGSLDGLAL--VDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASL-G 269
Query: 63  LECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122
            E +G ++  G  V+    GD+V  ++    +          V  +P+G S   AA+ P 
Sbjct: 270 SEGAGVVVETGPGVTGLAPGDRVMGMIPKA-FGPLAVADHRMVTRIPAGWSFARAASVPI 328
Query: 123 VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 182
           V  T +  +   + L PGES LVH  + G+G  AIQ+ +  G  V+ TA  ++  AV  +
Sbjct: 329 VFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAV--E 386
Query: 183 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
           L  +   + +T DF  +    TGG+GVDV+L+ +   +   +L  L   GR   +G
Sbjct: 387 LSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELG 442

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 91.3 bits (225), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 117/266 (43%), Gaps = 33/266 (12%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ Q   P  L+++EVE P I   EVL++++A  +   D     G +P        
Sbjct: 1   MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58
Query: 61  PGLECSGTILSVGKNVSRWKVGDQV--------CA----LLGG----------------G 92
           PG E  G +  VG  V+  KVGD+V        C      L G                G
Sbjct: 59  PGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDG 118
Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
           GYAE     A  V+ +P  +S ++AA       T +  + +T    PGE   ++ G  G+
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIY-GIGGL 176
Query: 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212
           G  A+Q  K  G+ V      +EKL + K+LGAD+ +N   ED    +KE+ GG    V+
Sbjct: 177 GHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVV 236
Query: 213 LDCMGASYFQRNLGSLNIDGRLFIIG 238
              +    FQ    S+   G   ++G
Sbjct: 237 -TAVSKPAFQSAYNSIRRGGACVLVG 261

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 91.3 bits (225), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 158/366 (43%), Gaps = 60/366 (16%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+ + + G P  L+L+++  P+ K  +VLIK+EA  +  +D   R+G +   +     
Sbjct: 1   MRAMRLVEIGKP--LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 61  P-------GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------L 89
                   G E +G I  VG  V  +  GD V             C +           L
Sbjct: 59  GVKLPVTLGHEIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWL 118
Query: 90  G---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH 146
           G    G YAE V VP  + L     +S  +AA       T +  V   S L P ++ +V 
Sbjct: 119 GINYDGAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKAS-LDPSKTLVVI 177
Query: 147 GGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205
           G   G+GT AIQ+ K   G  +      EE L   K  GAD  IN  ++D V+ ++  T 
Sbjct: 178 GAGGGLGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQ 237
Query: 206 GKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLR 265
           GKG D ++D         +  +L+I    +++  QG    +  +  LF   L   A  + 
Sbjct: 238 GKGADAVID------LNNSEKTLSI--YPYVLAKQG----KYVMVGLFGADLKYHAPLI- 284
Query: 266 SRSTENKALIVSEVEKN------VWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIG 319
              T N+   +  +  N      +      GKVKP++ K + L EA EA   +E+ + +G
Sbjct: 285 ---TLNEVQFIGSLVGNQSDFLGIMSLAEAGKVKPMVTKTMKLEEANEAIDNLENFKAVG 341
Query: 320 KIMLVP 325
           + +LVP
Sbjct: 342 RQVLVP 347

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 90.9 bits (224), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 116/266 (43%), Gaps = 33/266 (12%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ Q   P  L+++EVE P I   EVL++++A  +   D     G +P        
Sbjct: 1   MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58
Query: 61  PGLECSGTILSVGKNVSRWKVGDQV--------CA----LLGG----------------G 92
           PG E  G +  VG  V+  KVGD+V        C      L G                G
Sbjct: 59  PGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDG 118
Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
           GYAE     A  V+ +P  +S ++AA       T +  + +T    PGE   ++ G  G 
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIY-GIGGF 176
Query: 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212
           G  A+Q  K  G+ V      +EKL + K+LGAD+ +N   ED    +KE+ GG    V+
Sbjct: 177 GHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVV 236
Query: 213 LDCMGASYFQRNLGSLNIDGRLFIIG 238
              +    FQ    S+   G   ++G
Sbjct: 237 -TAVSKPAFQSAYNSIRRGGACVLVG 261

>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From Bacillus Thuringiensis Length = 340

Iteration: 1
 Score = 87.4 bits (215), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 103/244 (42%), Gaps = 1/244 (0%)
Query: 2   KAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           K I   + G+P +VLQ++      +KD+EV +++    +N +D +   G+Y         
Sbjct: 6   KLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNI 65
Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG E  G + +VG  VSR  +G +V  L G G + E V   A  V+P+P  +    AA  
Sbjct: 66  PGYEGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQM 125
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
                T W T   T +L   +  LV+   S IG    Q+ +    R+     + +     
Sbjct: 126 YINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEEL 185
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
             LGA   I+  T      V E T G G D  +D +G         SL  +G    IG  
Sbjct: 186 LRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLL 245
Query: 241 GGAK 244
            G +
Sbjct: 246 SGIQ 249

>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase Length = 198

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 71/136 (52%)
Query: 105 VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG 164
           V+P+P  ++  +AA F     T W ++     LSPGE  L+H  + G+G  A+ + K  G
Sbjct: 4   VVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIG 63
Query: 165 VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN 224
            R++ TAGS+ K  +   LG +   + ++ DF   + E T G GVDV+L+ +     QR 
Sbjct: 64  ARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRG 123
Query: 225 LGSLNIDGRLFIIGTQ 240
           +  L   GR   +G +
Sbjct: 124 VQILAPGGRFIELGKK 139

>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf In Complex With Nadp And 2-Octenoyl-Coa Length = 447

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 152/374 (40%), Gaps = 75/374 (20%)
Query: 15  LQLQEVEDPQIKDDEVLIKVEATALNRADTLQ----------------RKGSYPPPKGAS 58
           L+L EV  P++  DEVL+ V A+++N                      R+G +   +   
Sbjct: 50  LRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWAT-RHDQ 108
Query: 59  PYP--GLECSGTILSVGKNVSRWKVGDQVC----------------ALLGG--------- 91
           PY   G +CSG ++  G  V RWK GD V                  +LG          
Sbjct: 109 PYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFET 168
Query: 92  --GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT--SHLSPGESFLVHG 147
             GG AE   V A Q+LP P+ ++ ++AA  P  A T +  +     + +  G+  L+ G
Sbjct: 169 NFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWG 228
Query: 148 GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK----TEDF------- 196
            S G+G++AIQ  K  G        S +K A  + LG D+ IN      T+D        
Sbjct: 229 ASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRV 288
Query: 197 ------VARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNIT 250
                 +A++  E  G+  D++ +  G   F          G   I+  +GG       +
Sbjct: 289 VETGRKLAKLVVEKAGREPDIVFEHTGRVTF----------GLSVIVARRGGTVVTCGSS 338
Query: 251 SLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQ 310
           S +      +   ++ +          E ++        G V P +    PL EAAEA +
Sbjct: 339 SGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAVVPAMSAVYPLAEAAEACR 398
Query: 311 LMESSQHIGKIMLV 324
           ++++S+ +GK+ ++
Sbjct: 399 VVQTSRQVGKVAVL 412

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 153/345 (44%), Gaps = 34/345 (9%)
Query: 1   MKAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
           +KAI   QP       + +   ++ P+ K  E+L+K+++ ++N  DT QR         A
Sbjct: 3   LKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSK---A 59
Query: 58  SPYPGLECSGTILSVGKNVSRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSL 114
               G +  G + SVG  V+ +  GD V    +    G  AE   +    V   P  +S 
Sbjct: 60  PRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISA 119
Query: 115 KDAAAFPEVACTVWSTVF------MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVF 168
           + A + P    T + T+F         + + G++ L+  G+ G+G+ A Q+ K  G+RV 
Sbjct: 120 EQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVI 179
Query: 169 VTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSL 228
            TA   E +   K +GAD+ +N+K E  + + K + G + VD +        +  ++  L
Sbjct: 180 TTASRNETIEWTKKMGADIVLNHK-ESLLNQFKTQ-GIELVDYVFCTFNTDMYYDDMIQL 237
Query: 229 NIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR----------STENKALIVSE 278
            +  R   I T    + + ++ +L  K L+     + +R            E    I ++
Sbjct: 238 -VKPRGH-IATIVAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNK 295
Query: 279 VEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323
           VE+N++       ++      L      +AHQ++ES+  IGK+++
Sbjct: 296 VEQNIYQPTTTKVIEG-----LTTENIYQAHQILESNTMIGKLVI 335

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 144/338 (42%), Gaps = 41/338 (12%)
Query: 15  LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74
           L+ +++  P+ K +E+LI V+ + +   D     G +P P       G E +G ++ +G+
Sbjct: 18  LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGE 77
Query: 75  NVSRWKVGD--------------QVCAL----------LGG----GGYAEKVAVPAGQVL 106
           NV  WK+GD              + C L          L G    G + +     A Q  
Sbjct: 78  NVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAA 137
Query: 107 PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR 166
            +P G  L   A       TV+     +++L  G    + G + G+G+ A+Q  K  G R
Sbjct: 138 HIPQGTDLAQVAPILCAGITVYKA-LKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYR 196
Query: 167 VFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETGGKGVDVILDCMGASYFQRNL 225
           V    G E K  + + +G +V I++ K +D V  V + T G    VI   +  +  + + 
Sbjct: 197 VLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEAST 256
Query: 226 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWP 285
             +  +G   ++G   GAK   ++ +   K +++  + + +R+   +AL           
Sbjct: 257 RYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREAL----------D 306
Query: 286 AIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323
             A G VK  I K + L    E ++ ME  Q +G+ ++
Sbjct: 307 FFARGLVKSPI-KVVGLSTLPEIYEKMEKGQIVGRYVV 343

>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein 1 In Complex With Nadph Length = 375

Iteration: 1
 Score = 80.9 bits (198), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 158/362 (43%), Gaps = 54/362 (14%)
Query: 3   AIVITQPGSPEVLQL-QEVEDPQIK-DDEVLIKVEATALNRADTLQRKGS---------- 50
           A VI + G  EVL+  Q +  P I   +EV++KV A ++N  D   R G           
Sbjct: 24  AWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRD 83
Query: 51  --YPPPKGASPYP---GLECSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVPA 102
             +   KG   +P   G + SG ++  G +V  +K GD+V A +     G  +E V V  
Sbjct: 84  PLHVKIKGEE-FPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSG 142
Query: 103 GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS----PGESFLVHGGSSGIGTFAIQ 158
            +V   P  ++   AA+ P VA T WS +     L+     G+  L+ G S G+GTFAIQ
Sbjct: 143 NEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQ 202
Query: 159 MGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218
           + K     V     S++   + + LGAD  I+YK+     ++K     K  D ILD +G 
Sbjct: 203 VMKAWDAHV-TAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSL---KPFDFILDNVGG 258
Query: 219 S-------YFQRNLGS----------LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA 261
           S       + ++  G+          LN+D RL I    G  +T + + S   K L    
Sbjct: 259 STETWAPDFLKKWSGATYVTLVTPFLLNMD-RLGI--ADGMLQTGVTVGS---KALKHFW 312
Query: 262 AGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI 321
            G+  R     A        ++   +  GK++PVI +  P  +  EA   +E     GK 
Sbjct: 313 KGVHYRWAFFMA--SGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKT 370
Query: 322 ML 323
           ++
Sbjct: 371 VI 372

>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus Crotonyl Coa CarboxylaseREDUCTASE Length = 467

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 87/373 (23%), Positives = 146/373 (39%), Gaps = 79/373 (21%)
Query: 15  LQLQEVEDPQIKDDEVLIKVEATALNRADT-------------LQRKGSYPP--PKGASP 59
           + L EV  P++   E L+ V A+++N                 L+R G   P   +   P
Sbjct: 76  IHLDEVPVPELGPGEALVAVMASSVNYNSVWTSIFEPVSTFAFLERYGKLSPLTKRHDLP 135
Query: 60  YP--GLECSGTILSVGKNVSRWKVGDQVCAL---------------------------LG 90
           Y   G + +G +L  G  V+ W+ GD+V A                              
Sbjct: 136 YHIIGSDLAGVVLRTGPGVNAWQPGDEVVAHCLSVELESPDGHDDTMLDPEQRIWGFETN 195
Query: 91  GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS--HLSPGESFLVHGG 148
            GG AE   V   Q++P P  ++ ++AAA   V  T +  +   +   +  G++ L+ G 
Sbjct: 196 FGGLAEIALVKTNQLMPKPKHLTWEEAAAPGLVNSTAYRQLVSRNGAAMKQGDNVLIWGA 255
Query: 149 SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN-----YK------TED-- 195
           S G+G++A Q     G        S +K  +C+ +GA+  I+     YK      T+D  
Sbjct: 256 SGGLGSYATQFALAGGANPICVVSSPQKAEICRSMGAEAIIDRNAEGYKFWKDEHTQDPK 315
Query: 196 ----FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITS 251
               F  R++E TGG+ +D++ +  G   F  ++      G +    +  G   E +   
Sbjct: 316 EWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVYVTRKGGTITTCASTSGYMHEYDNRY 375
Query: 252 LFA--KRLT-VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEA 308
           L+   KR+     A  R     N+              IA GK+ P + K   L E  +A
Sbjct: 376 LWMSLKRIIGSHFANYREAYEANR-------------LIAKGKIHPTLSKTYSLEETGQA 422
Query: 309 HQLMESSQHIGKI 321
              +  + H GK+
Sbjct: 423 AYDVHRNLHQGKV 435

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 157/364 (43%), Gaps = 56/364 (15%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+ + + G P  L LQE+  P+ K  +VLIKVEA  +  +D   R+G +   +     
Sbjct: 1   MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 61  P-------GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------L 89
                   G E +G I  VG  V  +  GD V             C +           L
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118
Query: 90  G---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH 146
           G    G YAE V VP  + +     ++  +AA       T +  V   S L P ++ LV 
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVV 177
Query: 147 GGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205
           G   G+GT A+Q+ K   G  +      EE +   K  GAD  IN   +D +A ++  T 
Sbjct: 178 GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITE 237
Query: 206 GKGVDVILDCMGASYFQRNLG----SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA 261
            KGVD ++D    +Y ++ L     +L   G+  ++G  G    +L+  +       +Q 
Sbjct: 238 SKGVDAVIDL---NYSEKTLSVYPKALAKQGKYVMVGLFGA---DLHYHAPLITLSEIQF 291
Query: 262 AGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI 321
            G    +  +   I+   E         GKVKP+I K + L EA EA   +E+ + IG+ 
Sbjct: 292 VGSLVGNQSDFLGIMRLAE--------AGKVKPMITKTMKLEEANEAIDNLENFKAIGRQ 343
Query: 322 MLVP 325
           +L+P
Sbjct: 344 VLIP 347

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 157/364 (43%), Gaps = 56/364 (15%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+ + + G P  L LQE+  P+ K  +VLIKVEA  +  +D   R+G +   +     
Sbjct: 1   MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 61  P-------GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------L 89
                   G E +G I  VG  V  +  GD V             C +           L
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWL 118
Query: 90  G---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH 146
           G    G YAE V VP  + +     ++  +AA       T +  V   S L P ++ LV 
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVV 177
Query: 147 GGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205
           G   G+GT A+Q+ K   G  +      EE +   K  GAD  IN   +D +A ++  T 
Sbjct: 178 GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITE 237
Query: 206 GKGVDVILDCMGASYFQRNLG----SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA 261
            KGVD ++D    +Y ++ L     +L   G+  ++G  G    +L+  +       +Q 
Sbjct: 238 SKGVDAVIDL---NYSEKTLSVYPKALAKQGKYVMVGLFGA---DLHYHAPLITLSEIQF 291
Query: 262 AGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI 321
            G    +  +   I+   E         GKVKP+I K + L EA EA   +E+ + IG+ 
Sbjct: 292 VGSLVGNQSDFLGIMRLAE--------AGKVKPMITKTMKLEEANEAIDNLENFKAIGRQ 343
Query: 322 MLVP 325
           +L+P
Sbjct: 344 VLIP 347

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 136/305 (44%), Gaps = 40/305 (13%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGAS 58
           MKA V+   G+P  L+++EV+ P     +VL+K+EA+ +   D    +G +P  PP    
Sbjct: 7   MKAAVVHAYGAP--LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPL--- 61
Query: 59  PY-PGLECSGTILSVGKNVSRWKVGDQV--------CA-----LLG-------------- 90
           P+ PG E  G + +VG  V+R K GD+V        C      L G              
Sbjct: 62  PFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYS 121
Query: 91  -GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGS 149
             GGYAE V      V  +P  V   + A       TV+  +  T+   PG+ ++   G 
Sbjct: 122 VNGGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLKQTN-ARPGQ-WVAISGI 179
Query: 150 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
            G+G  A+Q  +  G+ V      + KL + + LGA + +N + ED V  ++ + GG   
Sbjct: 180 GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAH- 238
Query: 210 DVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRST 269
            V++  +  S F + +G     G + ++G   G      I  +  K L +  + + +R+ 
Sbjct: 239 GVLVTAVSNSAFGQAIGMARRGGTIALVGLPPG-DFPTPIFDVVLKGLHIAGSIVGTRAD 297
Query: 270 ENKAL 274
             +AL
Sbjct: 298 LQEAL 302

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 155/364 (42%), Gaps = 56/364 (15%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+ + + G P  L LQE+  P+ K  +VLIKVEA  +  +D   R+G +   +     
Sbjct: 1   MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 61  P-------GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------L 89
                   G E +G I  VG  V  +  GD V             C +           L
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118
Query: 90  G---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH 146
           G    G YAE V VP  + +     ++  +AA       T +  V   S L P ++ LV 
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVV 177
Query: 147 GGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205
           G   G+GT A+Q+ K   G  +      EE +   K  GAD  IN   +D +A ++  T 
Sbjct: 178 GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITE 237
Query: 206 GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA 261
            KGVD ++D   +    S + + L      G+  ++G  G    +L+  +       +Q 
Sbjct: 238 SKGVDAVIDLNNSEKTLSVYPKALAK---QGKYVMVGLFGA---DLHYHAPLITLSEIQF 291
Query: 262 AGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI 321
            G    +  +   I+   E         GKVKP+I K + L EA EA   +E+ + IG+ 
Sbjct: 292 VGSLVGNQSDFLGIMRLAE--------AGKVKPMITKTMKLEEANEAIDNLENFKAIGRQ 343
Query: 322 MLVP 325
           +L+P
Sbjct: 344 VLIP 347

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 131/302 (43%), Gaps = 34/302 (11%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+   G+P  L + EV  PQ    +V +K+EA+ +   D     G +P        
Sbjct: 3   MKAAVVRAFGAP--LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFI 60
Query: 61  PGLECSGTILSVGKNVSRWKVGDQV--------CA-----LLG---------------GG 92
           PG E  G + +VG  VSR K GD+V        C      L G                G
Sbjct: 61  PGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNG 120
Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
           GY E V      V  +P  V   + A       TV+  + +T    PG+ ++V  G  G+
Sbjct: 121 GYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTD-TRPGQ-WVVISGIGGL 178
Query: 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212
           G  A+Q  +  G+RV      + KL + + LGA+V +N +  D  A +++E GG    V+
Sbjct: 179 GHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAH-GVL 237
Query: 213 LDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK 272
           +  +    F + +G +   G + + G   G      I  +  K +T++ + + +RS   +
Sbjct: 238 VTAVSPKAFSQAIGMVRRGGTIALNGLPPG-DFGTPIFDVVLKGITIRGSIVGTRSDLQE 296
Query: 273 AL 274
           +L
Sbjct: 297 SL 298

>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/375 (22%), Positives = 147/375 (39%), Gaps = 83/375 (22%)
Query: 15  LQLQEVEDPQIKDDEVLIKVEATALNRADT-------------LQRKG--SYPPPKGASP 59
           + L +V  P++   E L+ V A+++N                 L+R G  S    +   P
Sbjct: 58  IHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLP 117
Query: 60  YP--GLECSGTILSVGKNVSRWKVGDQVCAL---------------------------LG 90
           Y   G + +G +L  G  V+ W+ GD+V A                              
Sbjct: 118 YHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETN 177
Query: 91  GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS--HLSPGESFLVHGG 148
            GG AE   V + Q++P P  +S ++AAA   V  T +  +   +   +  G++ L+ G 
Sbjct: 178 FGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGA 237
Query: 149 SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN--------YKTED----- 195
           S G+G++A Q     G        S +K  +C+ +GA+  I+        +K E+     
Sbjct: 238 SGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPK 297
Query: 196 ----FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITS 251
               F  R++E TGG+ +D++ +  G   F          G    +  +GG  T    TS
Sbjct: 298 EWKRFGKRIRELTGGEDIDIVFEHPGRETF----------GASVFVTRKGGTITTCASTS 347
Query: 252 LFAKRLTVQAAGLRSRSTENKALIVSEVE--KNVWPA---IAVGKVKPVIYKYLPLCEAA 306
            +     +     R      K +I S     +  W A   IA G++ P + K   L +  
Sbjct: 348 GY-----MHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPTLSKVYSLEDTG 402
Query: 307 EAHQLMESSQHIGKI 321
           +A   +  + H GK+
Sbjct: 403 QAAYDVHRNLHQGKV 417

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 35/324 (10%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+   G P  L + EV  PQ    ++ + ++A+ +   D    +G +P        
Sbjct: 26  MKAAVVRAFGKP--LTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNPPFI 83
Query: 61  PGLECSGTILSVGKNVSRWKVGDQV--------CA----LLGG----------------G 92
           PG E  G + +VG  V   K GD+V        C      LGG                G
Sbjct: 84  PGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEEQLNTGYSVNG 143
Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
           G+AE V      V  +P  +   + A       TV+  + +T    PG+ ++V  G  G+
Sbjct: 144 GFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTVYKGLKVTD-TKPGD-WVVISGIGGL 201
Query: 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVDV 211
           G  A+Q  +  G+ V      + KL + + LGA V +N KT  D  A +++ET G    V
Sbjct: 202 GHMAVQYARAMGLNVAAVDIDDRKLDLARRLGATVTVNAKTVADPAAYIRKETDGGAQGV 261
Query: 212 ILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTEN 271
           ++  +    F++ LG +   G + + G   G    L+I ++    +TV+ + + +R    
Sbjct: 262 LVTAVSPKAFEQALGMVARGGTVSLNGLPPG-DFPLSIFNMVLNGVTVRGSIVGTRLDLQ 320
Query: 272 KALIVSEVEKNVWPAIAVGKVKPV 295
           ++L  +  +  V   I  GK++ +
Sbjct: 321 ESLDFA-ADGKVKATIQTGKLEDI 343

>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s With Bound Nadp Length = 371

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 105/249 (42%), Gaps = 40/249 (16%)
Query: 23  PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVG 82
           P +  D+V ++VEA A+N +DT  R G +  P     + G + +GT+++VG +V+  +VG
Sbjct: 32  PMLPRDQVYVRVEAVAINPSDTSMR-GQFATPWA---FLGTDYAGTVVAVGSDVTHIQVG 87
Query: 83  DQV-------CALLGGGGYAEKVAVPAGQVLP-VPSGVSLKDAAAFPEVACTVWSTVFMT 134
           D+V       C      G   +  V  G+V   +P G+S + AAA P    T    + + 
Sbjct: 88  DRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLL 147
Query: 135 SHLSPGES------------FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 182
               P  S             LV+GGS+   T  +QM +  G  + +   S     + K 
Sbjct: 148 GLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATCSPHNFDLAKS 206
Query: 183 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF---IIGT 239
            GA+   +Y+  +    ++  T    +   LDC+            N++   F    IG 
Sbjct: 207 RGAEEVFDYRAPNLAQTIRTYT-KNNLRYALDCI-----------TNVESTTFCFAAIGR 254
Query: 240 QGGAKTELN 248
            GG    LN
Sbjct: 255 AGGHYVSLN 263

>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa Length = 371

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 105/249 (42%), Gaps = 40/249 (16%)
Query: 23  PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVG 82
           P +  D+V ++VEA A+N +DT  R G +  P     + G + +GT+++VG +V+  +VG
Sbjct: 32  PMLPRDQVYVRVEAVAINPSDTKMR-GQFATPWA---FLGTDYAGTVVAVGSDVTHIQVG 87
Query: 83  DQV-------CALLGGGGYAEKVAVPAGQVLP-VPSGVSLKDAAAFPEVACTVWSTVFMT 134
           D+V       C      G   +  V  G+V   +P G+S + AAA P    T    + + 
Sbjct: 88  DRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLL 147
Query: 135 SHLSPGES------------FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 182
               P  S             LV+GGS+   T  +QM +  G  + +   S     + K 
Sbjct: 148 GLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATCSPHNFDLAKS 206
Query: 183 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF---IIGT 239
            GA+   +Y+  +    ++  T    +   LDC+            N++   F    IG 
Sbjct: 207 RGAEEVFDYRAPNLAQTIRTYT-KNNLRYALDCI-----------TNVESTTFCFAAIGR 254
Query: 240 QGGAKTELN 248
            GG    LN
Sbjct: 255 AGGHYVSLN 263

>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human Fas Ii Length = 344

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 120/269 (44%), Gaps = 12/269 (4%)
Query: 1   MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           ++A+V    G P +V++L+ +E   ++  +V +K+ A  +N +D    +G+Y        
Sbjct: 14  VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPA 73
Query: 60  YPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVL-PVPSGVSLKDAA 118
             G E    +++VG NV+  K GD V     G G     AV + + L  VPS + L+ AA
Sbjct: 74  VGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAA 133
Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---E 175
                 CT +  +     L PG+S + +  +SG+G   IQ+    G+R           +
Sbjct: 134 TLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQ 193
Query: 176 KLA-VCKDLGADVCINYKTEDFVARVKEETGGKGV---DVILDCMGASYFQRNLGSLNID 231
           KL+   K LGA+  I   TE+ + R + +   K +    + L+C+G       L  L   
Sbjct: 194 KLSDRLKSLGAEHVI---TEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARG 250
Query: 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQ 260
           G +   G         +++ L  K L ++
Sbjct: 251 GTMVTYGGMAKQPVVASVSLLIFKDLKLR 279

>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester Reductase (Cgi- 63) Length = 357

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 120/269 (44%), Gaps = 12/269 (4%)
Query: 1   MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           ++A+V    G P +V++L+ +E   ++  +V +K+ A  +N +D    +G+Y        
Sbjct: 27  VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPA 86
Query: 60  YPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVL-PVPSGVSLKDAA 118
             G E    +++VG NV+  K GD V     G G     AV + + L  VPS + L+ AA
Sbjct: 87  VGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAA 146
Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---E 175
                 CT +  +     L PG+S + +  +SG+G   IQ+    G+R           +
Sbjct: 147 TLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQ 206
Query: 176 KLA-VCKDLGADVCINYKTEDFVARVKEETGGKGV---DVILDCMGASYFQRNLGSLNID 231
           KL+   K LGA+  I   TE+ + R + +   K +    + L+C+G       L  L   
Sbjct: 207 KLSDRLKSLGAEHVI---TEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARG 263
Query: 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQ 260
           G +   G         +++ L  K L ++
Sbjct: 264 GTMVTYGGMAKQPVVASVSLLIFKDLKLR 292

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 37/268 (13%)
Query: 1   MKAIVITQPGSPE-VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           MKA V+    +P+    L E E   IK +E L+ +E   +   D     G Y    G   
Sbjct: 1   MKAAVVRH--NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDYGNKAGT-- 56
Query: 60  YPGLECSGTILSVGKNVSRWKVGDQV----------------------CALLGGGGY--- 94
             G E  G +  +G +VS  +VGD+V                      C  +   GY   
Sbjct: 57  VLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVD 116
Query: 95  ---AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
              AE+  V A   + VP G+   +A++      T +  +   S + PG+  ++  G+ G
Sbjct: 117 GGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI-KVSGVKPGDWQVIF-GAGG 174
Query: 152 IGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210
           +G  AIQ  K   G +V     +++KL + K +GADV IN    + V  +K+ TGG GV 
Sbjct: 175 LGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVIINSGDVNPVDEIKKITGGLGVQ 234
Query: 211 VILDCMGASY-FQRNLGSLNIDGRLFII 237
             + C  A   F++ + SL   G++  +
Sbjct: 235 SAIVCAVARIAFEQAVASLKPMGKMVAV 262

>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p Heterodimer From Candida Tropicalis Length = 386

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 36/272 (13%)
Query: 2   KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
           +A++ TQ G P +VL  Q  E++D  +  +EV++K   + +N +D  Q +G YP  P K 
Sbjct: 27  QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKT 86
Query: 57  A---SPYPGLECSG----TILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
               +  P   C       ++ VG NVS  + GD V              LG      K+
Sbjct: 87  TGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 146
Query: 99  AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGES-FLVHGGSSGIGTFA 156
             PA  +    P+G+++   A       T +  +     L+PG+  F+ +GG+S +G +A
Sbjct: 147 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYA 206
Query: 157 IQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCI---NYKTEDFVARVKE---ETGG 206
            Q+GK         +      +E +A  K+LGA   I      +++F   +KE   ++GG
Sbjct: 207 SQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIKQSGG 266
Query: 207 KGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
           +   + L+C+G          LN +G +   G
Sbjct: 267 E-AKLALNCVGGKSSTGIARKLNNNGLMLTYG 297

>pdb|1H0K|A Chain A, Enoyl Thioester Reductase 2 Length = 364

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 36/272 (13%)
Query: 2   KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
           +A++ TQ G P +VL  Q  E++D  +  +EV++K   + +N +D  Q +G YP  P K 
Sbjct: 5   QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKT 64
Query: 57  A---SPYPGLECSG----TILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
               +  P   C       ++ VG NVS  + GD V              LG      K+
Sbjct: 65  TGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 124
Query: 99  AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGES-FLVHGGSSGIGTFA 156
             PA  +    P+G+++   A       T +  +     L+PG+  F+ +GG+S +G +A
Sbjct: 125 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYA 184
Query: 157 IQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCIN---YKTEDFVARVKE---ETGG 206
            Q+GK         +      +E +A  K+LGA   I      +++F   +KE   ++GG
Sbjct: 185 SQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIKQSGG 244
Query: 207 KGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
           +   + L+C+G          LN +G +   G
Sbjct: 245 E-AKLALNCVGGKSSTGIARKLNNNGLMLTYG 275

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 37/268 (13%)
Query: 1   MKAIVITQPGSPE-VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           MKA V+    +P+    L E E   IK +E L+ +E   +   D     G +    G   
Sbjct: 1   MKAAVVRH--NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGNKAGT-- 56
Query: 60  YPGLECSGTILSVGKNVSRWKVGDQV----------------------CALLGGGGY--- 94
             G E  G +  +G +VS  +VGD+V                      C  +   GY   
Sbjct: 57  VLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVD 116
Query: 95  ---AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
              AE+  V A   + VP G+   +A++      T +  +   S + PG+  ++  G+ G
Sbjct: 117 GGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI-KVSGVKPGDWQVIF-GAGG 174
Query: 152 IGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210
           +G  AIQ  K   G +V     +++KL + K +GADV IN    + V  +K+ TGG GV 
Sbjct: 175 LGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQ 234
Query: 211 VILDCMGASY-FQRNLGSLNIDGRLFII 237
             + C  A   F++ + SL   G++  +
Sbjct: 235 SAIVCAVARIAFEQAVASLKPMGKMVAV 262

>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p Heterodimer From Candida Tropicalis Length = 386

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 36/272 (13%)
Query: 2   KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
           +A++ TQ G P +VL  Q  E++D  +  +EV++K   + +N +D  Q +G YP  P K 
Sbjct: 27  QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKT 86
Query: 57  A---SPYPGLECSG----TILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
               +  P   C       ++ VG NVS  + GD V              LG      K+
Sbjct: 87  TGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 146
Query: 99  AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGES-FLVHGGSSGIGTFA 156
             PA  +    P+G+++   A       T +  +     L+PG+  F+ +GG+S +G +A
Sbjct: 147 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYA 206
Query: 157 IQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCI---NYKTEDFVARVKE---ETGG 206
            Q+GK         +      +E +A  K+LGA   I      + +F   +KE   ++GG
Sbjct: 207 SQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGG 266
Query: 207 KGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
           +   + L+C+G          LN +G +   G
Sbjct: 267 E-AKLALNCVGGKSSTGIARKLNNNGLMLTYG 297

>pdb|1GU7|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis Length = 364

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 36/272 (13%)
Query: 2   KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
           +A++ TQ G P +VL  Q  E++D  +  +EV++K   + +N +D  Q +G YP  P K 
Sbjct: 5   QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKT 64
Query: 57  A---SPYPGLECSG----TILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
               +  P   C       ++ VG NVS  + GD V              LG      K+
Sbjct: 65  TGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 124
Query: 99  AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGES-FLVHGGSSGIGTFA 156
             PA  +    P+G+++   A       T +  +     L+PG+  F+ +GG+S +G +A
Sbjct: 125 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYA 184
Query: 157 IQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCIN---YKTEDFVARVKE---ETGG 206
            Q+GK         +      +E +A  K+LGA   I      + +F   +KE   ++GG
Sbjct: 185 SQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGG 244
Query: 207 KGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
           +   + L+C+G          LN +G +   G
Sbjct: 245 E-AKLALNCVGGKSSTGIARKLNNNGLMLTYG 275

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 149/363 (41%), Gaps = 56/363 (15%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           +A+ + + G P  L LQE+  P+ K  +VLIKVEA  +  +D   R+G +   +      
Sbjct: 2   RAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLG 59
Query: 62  -------GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------LG 90
                  G E +G I  VG  V  +  GD V             C +           LG
Sbjct: 60  VKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLG 119
Query: 91  ---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
               G YAE V VP  +       ++  +AA       T +  V   S L P ++ LV G
Sbjct: 120 INFDGAYAEYVIVPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVVG 178
Query: 148 GSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206
              G+GT A+Q+ K   G  +      EE +   K  GAD  IN   +D +A ++  T  
Sbjct: 179 AGGGLGTXAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES 238
Query: 207 KGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAA 262
           KGVD ++D   +    S + + L      G+   +G  G    +L+  +       +Q  
Sbjct: 239 KGVDAVIDLNNSEKTLSVYPKALAK---QGKYVXVGLFG---ADLHYHAPLITLSEIQFV 292
Query: 263 GLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIM 322
           G    +  +   I    E         GKVKP I K   L EA EA   +E+ + IG+ +
Sbjct: 293 GSLVGNQSDFLGIXRLAE--------AGKVKPXITKTXKLEEANEAIDNLENFKAIGRQV 344
Query: 323 LVP 325
           L+P
Sbjct: 345 LIP 347

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 153/360 (42%), Gaps = 60/360 (16%)
Query: 3   AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD------TLQRKGSYPPPKG 56
           AI  T+PG     +L EV+ P+    EVLIKV AT++   D          +    PP+ 
Sbjct: 6   AIXKTKPGYGA--ELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQ- 62
Query: 57  ASPYPGLECSGTILSVGKNVSRWKVGD---------------------QVC---ALLG-- 90
                G E +G ++ +G  V   +VGD                      VC    + G  
Sbjct: 63  ---IXGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVD 119
Query: 91  -GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGS 149
             G +AE   VPA  +   P  +   + A   E       TV +   +S G+S L+ G  
Sbjct: 120 TDGVFAEYAVVPAQNIWKNPKSIP-PEYATLQEPLGNAVDTV-LAGPIS-GKSVLITGAG 176
Query: 150 SGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 208
             +G   I + K  G   V V+  S+ +  + K +GAD  IN   ED V  V + T G G
Sbjct: 177 P-LGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVXDITDGNG 235
Query: 209 VDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKRLTVQAAGLRS 266
           VDV L+  GA    ++ L ++   GR+ ++G   G  T + N   +F K LT+   G+  
Sbjct: 236 VDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIF-KALTIY--GITG 292
Query: 267 RSTENKALIVSEVEKNVWPAIAVGKVK--PVI-YKYLPLCEAAEAHQLMESSQHIGKIML 323
           R        VS + ++       GK+   P+I +KY    +  EA +L  + +  GK++ 
Sbjct: 293 RHLWETWYTVSRLLQS-------GKLNLDPIITHKYKGFDKYEEAFELXRAGK-TGKVVF 344

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 153/360 (42%), Gaps = 60/360 (16%)
Query: 3   AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD------TLQRKGSYPPPKG 56
           AI  T+PG     +L EV+ P+    EVLIKV AT++   D          +    PP+ 
Sbjct: 7   AIXKTKPGYGA--ELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQ- 63
Query: 57  ASPYPGLECSGTILSVGKNVSRWKVGD---------------------QVC---ALLG-- 90
                G E +G ++ +G  V   +VGD                      VC    + G  
Sbjct: 64  ---IXGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVD 120
Query: 91  -GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGS 149
             G +AE   VPA  +   P  +   + A   E       TV +   +S G+S L+ G  
Sbjct: 121 TDGVFAEYAVVPAQNIWKNPKSIP-PEYATLQEPLGNAVDTV-LAGPIS-GKSVLITGAG 177
Query: 150 SGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 208
             +G   I + K  G   V V+  S+ +  + K +GAD  IN   ED V  V + T G G
Sbjct: 178 P-LGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVXDITDGNG 236
Query: 209 VDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKRLTVQAAGLRS 266
           VDV L+  GA    ++ L ++   GR+ ++G   G  T + N   +F K LT+   G+  
Sbjct: 237 VDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIF-KALTIY--GITG 293
Query: 267 RSTENKALIVSEVEKNVWPAIAVGKVK--PVI-YKYLPLCEAAEAHQLMESSQHIGKIML 323
           R        VS + ++       GK+   P+I +KY    +  EA +L  + +  GK++ 
Sbjct: 294 RHLWETWYTVSRLLQS-------GKLNLDPIITHKYKGFDKYEEAFELXRAGK-TGKVVF 345

>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 9/217 (4%)
Query: 27  DDEVLIKVEATALNRA--DTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQ 84
           + ++L+K E  +L+ A    +    SY PP G          G +L V K+   ++ GD 
Sbjct: 38  EGQILVKNEYLSLDPAMRGWMNDARSYIPPVGIGEVMRALGVGKVL-VSKHPG-FQAGDY 95
Query: 85  VCALLGGGGYAEKVAVPAGQVLPVPSGVSL-KDAAAFPEVACTVWSTVFMTSHLSPGESF 143
           V   LG   Y   +  P G     PS   L +  +A      T +  +        GE+ 
Sbjct: 96  VNGALGVQDYF--IGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETV 153
Query: 144 LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-VCKDLGADVCINYKTEDFVARVKE 202
           ++ G +  +G+ A Q+ + +G RV   AG  EK   + ++LG D  I+YK ED  A +K 
Sbjct: 154 VISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKR 213
Query: 203 ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
           E   KG+DV  D +G       L  +    R+ + G 
Sbjct: 214 EC-PKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGA 249

>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol Dehydrogenase Protein From Rhizobium Etli Cfn 42 Length = 363

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 19  EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGAS-PYPGLECSGTILSVGKNVS 77
           E+  P     ++L++V+A ++N  D   R+ +  PP G      G + +G + +VG +V+
Sbjct: 44  ELPKPAPAGHDILVEVKAVSVNPVDYKVRRST--PPDGTDWKVIGYDAAGIVSAVGPDVT 101
Query: 78  RWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT 134
            ++ GD+V    +++  G  AE   V    V   P  +   +AAA P  + T W   F  
Sbjct: 102 LFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDR 161
Query: 135 SHLS---PGES--FLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVC 188
             ++   PG +   L+ GG+ G+G+ A+Q+ + +  + V  TA   E     K LGA   
Sbjct: 162 LDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHV 221
Query: 189 INY 191
           I++
Sbjct: 222 IDH 224

>pdb|3PI7|A Chain A, Crystal Structure Of A Putative Nadph:quinone Reductase (Mll3093) From Mesorhizobium Loti At 1.71 A Resolution Length = 349

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 11/195 (5%)
Query: 29  EVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKN-VSRWKVGDQVC- 86
           +VLIKV   ++N +D    KG Y  P+      G E  GTI++ G    ++  VG +V  
Sbjct: 51  QVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAF 110
Query: 87  --ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF---PEVACTVWSTVFMTSHLSPGE 141
              L   G +AE     A   +P+   V  +D AA    P  A   +  V         +
Sbjct: 111 ATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAXIVNPLTAIAXFDIVKQEGE----K 166
Query: 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 201
           +F+   G+S +    I + K +G R  VT   +E++A+ KD+GA   +N K  DF A ++
Sbjct: 167 AFVXTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLR 226
Query: 202 EETGGKGVDVILDCM 216
           E    +   + LD +
Sbjct: 227 EVXKAEQPRIFLDAV 241

>pdb|1GYR|A Chain A, Mutant Form Of Enoyl Thioester Reductase From Candida Tropicalis Length = 364

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 119/272 (43%), Gaps = 36/272 (13%)
Query: 2   KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
           +A++ TQ G P +VL  Q  E++D  +  +EV++K   + +N +D  Q +G  P  P K 
Sbjct: 5   QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVNPSKPAKT 64
Query: 57  A---SPYPGLECSGT----ILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
               +  P   C       ++ VG NVS  + GD V              LG      K+
Sbjct: 65  TGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 124
Query: 99  AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGES-FLVHGGSSGIGTFA 156
             PA  +    P+G+++   A       T +  +     L+PG+  F+ +GG+S +G +A
Sbjct: 125 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYA 184
Query: 157 IQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCIN---YKTEDFVARVKE---ETGG 206
            Q+GK         +      +E +A  K+LGA   I      + +F   +KE   ++GG
Sbjct: 185 SQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGG 244
Query: 207 KGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
           +   + L+C+G          LN +G +   G
Sbjct: 245 E-AKLALNCVGGKSSTGIARKLNNNGLMLTYG 275

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199
           GE+ LV   +  +G+   Q+ K +G +V   AGS+EK+A  K +G D   NYKT + +  
Sbjct: 146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEE 205
Query: 200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
             ++    G D   D +G  +    L  +   G++ I G
Sbjct: 206 ALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICG 244

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 51/99 (51%)
Query: 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199
           GE+ +V+  +  +G+   Q+ K +G +V    GS+EK+A  + LG DV  NYKT + +  
Sbjct: 141 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKLGFDVVFNYKTVESLEE 200
Query: 200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
             ++    G D   D +G  +    +G +   GR+ I G
Sbjct: 201 TLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 239

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 51/99 (51%)
Query: 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199
           GE+ +V+  +  +G+   Q+ K +G +V    GS+EK+A  + LG DV  NYKT + +  
Sbjct: 162 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKLGFDVVFNYKTVESLEE 221
Query: 200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
             ++    G D   D +G  +    +G +   GR+ I G
Sbjct: 222 TLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 260

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 149/364 (40%), Gaps = 60/364 (16%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD------TLQRKGSYPPP 54
           M+AI+ T+P      +L EV+ P+    EVLIKV AT++   D          +    PP
Sbjct: 5   MQAIMKTKPAYGA--ELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPP 62
Query: 55  KGASPYPGLECSGTILSVGKNVSRWKVGD---------------------QVC---ALLG 90
           +      G E +G ++ VG  V   +VGD                      VC    + G
Sbjct: 63  Q----IMGHEVAGEVVEVGPGVEDLQVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFG 118
Query: 91  ---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
               G +A    VPA      P  +   + AA  E       TV        G S L+ G
Sbjct: 119 VDMDGVFAHYAIVPAKNAWKNPKDMP-PEYAALQEPLGNAVDTVLAGP--IAGRSTLITG 175
Query: 148 GSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206
               +G   I + K  G   V V+  SE +  + K +GAD  +N   ED V  V + T G
Sbjct: 176 AGP-LGLLGIAVAKASGAYPVIVSEPSEFRRKLAKKVGADYVVNPFEEDPVKFVMDITDG 234
Query: 207 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKRLTVQAAGL 264
            GV+V L+  GA    ++ L ++   GR+ ++G      T + N   +F K L V   G+
Sbjct: 235 AGVEVFLEFSGAPKALEQGLKAVTPGGRVSLLGLFPREVTIDFNNLIIF-KALEVH--GI 291
Query: 265 RSRSTENKALIVSEVEKNVWPAIAVGKVK--PVI-YKYLPLCEAAEAHQLMESSQHIGKI 321
             R        VS +       I  GK+   P+I +KY    +  EA +LM + +  GK+
Sbjct: 292 TGRHLWETWYTVSSL-------IQSGKLNLDPIITHKYKGFDKFEEAFELMRAGK-TGKV 343
Query: 322 MLVP 325
           +  P
Sbjct: 344 VFFP 347

>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From Salmonella Enterica In Complex With Nadp Length = 324

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 114/274 (41%), Gaps = 27/274 (9%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           +A+++ Q     +  +Q +E+ Q+   +V + V  ++LN  D L   G     +     P
Sbjct: 2   QALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPXIP 61
Query: 62  GLECSGTI-------LSVGKNV--SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGV 112
           G++ +GT+          G+ V  + W VG+        GG AE+  V    ++ +P+G+
Sbjct: 62  GIDFAGTVHASEDPRFHAGQEVLLTGWGVGENHW-----GGLAERARVKGDWLVALPAGL 116
Query: 113 SLKDA-----AAFPEVACTVWSTVFMTSHLSPGE-SFLVHGGSSGIGTFAIQMGKCQGVR 166
           S ++A     A F    C         + + P +   +V G S G+G+ A+ +    G +
Sbjct: 117 SSRNAXIIGTAGFTAXLCV---XALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQ 173
Query: 167 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG 226
           V   +G E      K LGA+  ++ + E   +R  E+    G    +D +G     + L 
Sbjct: 174 VAAVSGRESTHGYLKSLGANRILS-RDEFAESRPLEKQLWAGA---IDTVGDKVLAKVLA 229
Query: 227 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 260
             N  G +   G  GG      +     + + +Q
Sbjct: 230 QXNYGGCVAACGLAGGFALPTTVXPFILRNVRLQ 263

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 128/319 (40%), Gaps = 57/319 (17%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+  T+ GS  V+   ++  P     E+L+KV A  L  +D        P  + A   
Sbjct: 1   MKAVQYTEIGSEPVVV--DIPTPTPGPGEILLKVTAAGLCHSDIFVMD--MPAAQYAYGL 56
Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
           P   G E  GT+  +G+ V+ + VGD V             CA                 
Sbjct: 57  PLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITP 116
Query: 88  --LLGGGGYAE-------KVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS 138
             L   G  AE       +  VP G + PV +   L DA   P  A +      +   L 
Sbjct: 117 PGLGSPGSMAEYMIVDSARHLVPIGDLDPV-AAAPLTDAGLTPYHAIS-----RVLPLLG 170
Query: 139 PGESFLVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV 197
           PG + +V G   G+G   IQ+ +     RV      +++LA+ +++GAD  +        
Sbjct: 171 PGSTAVVIG-VGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAAD 229
Query: 198 ARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL-FAK 255
           A ++E TGG+G   + D +GA S        + +DG + ++G   GA  ++    + F  
Sbjct: 230 A-IRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGA 288
Query: 256 RLTVQAAGLRSRSTENKAL 274
            +     G RS   E  AL
Sbjct: 289 SVVTPYWGTRSELMEVVAL 307

>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus Stearothermophilus Length = 328

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 19/256 (7%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPK--GAS 58
            +A V+ +  +     +Q +    + + +VL++V  +++N  D L    S P  K     
Sbjct: 4   FQAFVVNKTETEFTAGVQTISXDDLPEGDVLVRVHYSSVNYKDGL---ASIPDGKIVKTX 60
Query: 59  PY-PGLECSGTILSVGKNVSRWKVGDQVCA------LLGGGGYAEKVAVPAGQVLPVPSG 111
           P+ PG++ +G ++S      R++ GD+V A      +   GGY+E   +    ++P+P G
Sbjct: 61  PFVPGIDLAGVVVS--SQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKG 118
Query: 112 VSLKDAAAFPEVACTVWSTVF-MTSH-LSPGES-FLVHGGSSGIGTFAIQMGKCQGVRVF 168
           ++LK+A A      T   ++  +  H L+P     LV G + G+G+ A+     +G  V 
Sbjct: 119 LTLKEAXAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSXLAKRGYTVE 178
Query: 169 VTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSL 228
            + G   +    + LGA   +    ED  A        +     +D +G       L   
Sbjct: 179 ASTGKAAEHDYLRVLGAKEVL--AREDVXAERIRPLDKQRWAAAVDPVGGRTLATVLSRX 236
Query: 229 NIDGRLFIIGTQGGAK 244
              G + + G  GGA+
Sbjct: 237 RYGGAVAVSGLTGGAE 252

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 147/367 (40%), Gaps = 68/367 (18%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD------TLQRKGSYPPP 54
           M+A+    P   E L L +   P+    E+L++VEA ++   D          +G   PP
Sbjct: 1   MRALAKLAP--EEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPP 58
Query: 55  KGASPYPGLECSGTILSVGKNVSRWKVGDQV------------------------CALLG 90
                  G E SG + +VG  V R +VGD V                          +LG
Sbjct: 59  L----VTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILG 114
Query: 91  ---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
               GG+AE V VPA      P  +  + AA        V  TV+  S +S G+S L+ G
Sbjct: 115 VDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAV-HTVYAGSGVS-GKSVLITG 172
Query: 148 GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206
               IG  A  + +  G   + V+  +  +LA  +   AD  +N   ED +  V+  T G
Sbjct: 173 AGP-IGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVT-G 229
Query: 207 KGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLR 265
            GV+V+L+  G  +   + L +L   G   I+G         ++      R  + A G+ 
Sbjct: 230 SGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSD-PIRFDLAGELVMR-GITAFGIA 287
Query: 266 SRS-----TENKALIVSEVEKNVWPAIAVGKV--KPVIYKYLPLCEAAEAHQLMESSQHI 318
            R       +  AL+ S            G+V   P++   LPL    EA  L+ S Q +
Sbjct: 288 GRRLWQTWMQGTALVYS------------GRVDLSPLLTHRLPLSRYREAFGLLASGQAV 335
Query: 319 GKIMLVP 325
            K++L P
Sbjct: 336 -KVILDP 341

>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh Length = 345

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 114/275 (41%), Gaps = 27/275 (9%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           ++A+++ Q     +  +Q +++ ++ + +V + V  ++LN  D L   G     +     
Sbjct: 22  LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMI 81
Query: 61  PGLECSGTI-------LSVGKNV--SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSG 111
           PG++ +GT+          G+ V  + W VG+        GG AE+  V    ++ +P G
Sbjct: 82  PGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHW-----GGLAEQARVKGDWLVAMPQG 136
Query: 112 VSLKDA-----AAFPEVACTVWSTVFMTSHLSPGE-SFLVHGGSSGIGTFAIQMGKCQGV 165
           +  + A     A F  + C +       + + P +   +V G S G+G+ A+ +    G 
Sbjct: 137 LDARKAMIIGTAGFTAMLCVM---ALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY 193
Query: 166 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL 225
           +V   +G E      K LGA   +  + E   +R  E+    G    +D +G     + L
Sbjct: 194 QVVAVSGRESTHEYLKSLGASRVLP-RDEFAESRPLEKQVWAGA---IDTVGDKVLAKVL 249
Query: 226 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 260
             +N  G +   G  GG      +     + + +Q
Sbjct: 250 AQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQ 284

>pdb|3IUP|A Chain A, Crystal Structure Of Putative Nadph:quinone Oxidoreductase (Yp_296108.1) From Ralstonia Eutropha Jmp134 At 1.70 A Resolution Length = 379

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 91/235 (38%), Gaps = 37/235 (15%)
Query: 15  LQLQEVEDPQIKDDEVLIKVEATALNRAD-----------TLQRKGSYPPPKGASPYP-- 61
           L L  ++ P    DEVLI++EA+ LN +D           T +  G+   P   +  P  
Sbjct: 20  LSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADXSTAKASGTAERPIVTARVPEG 79
Query: 62  ---------------GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVL 106
                          G E +G ++  G + +   +  +  A +GG  Y++   +PA Q L
Sbjct: 80  AXRSXAGRLDASXPVGNEGAGVVVEAGSSPAAQALXGKTVAAIGGAXYSQYRCIPADQCL 139
Query: 107 PVPSGVSLKDAAAF---PEVACTVWSTVFMTSHLSPGESFLVH-GGSSGIGTFAIQMGKC 162
            +P G +  D A+    P  A     T  +  H     S LVH   +S +G    Q+   
Sbjct: 140 VLPEGATPADGASSFVNPLTALGXVETXRLEGH-----SALVHTAAASNLGQXLNQICLK 194
Query: 163 QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217
            G+++      +E+  + K  GA    N  +  F   + E     G  +  D  G
Sbjct: 195 DGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFXQDLTEALVSTGATIAFDATG 249

>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 111/254 (43%), Gaps = 50/254 (19%)
Query: 12  PEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGS------YPPPKGASPYPGLE 64
           PEV +++EV +P+I K  E++IKV+A  +  +D    +        YP   G     G E
Sbjct: 40  PEV-RVEEVPEPRIEKPTEIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHE 98
Query: 65  CSGTILSVG------KNVSRWKVGDQVCA---LLGG------------------------ 91
            SG ++  G      +   R+++G+ VCA   L  G                        
Sbjct: 99  FSGVVVEAGPEAINRRTNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENLNELGFNVD 158
Query: 92  GGYAEKVAVPAG------QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH-LSPGESFL 144
           G +AE V V A       ++  V  G  L  A +  E     ++ V +    + PG++ +
Sbjct: 159 GAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVV 218
Query: 145 VHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 203
           + GG   IG  A+ + K  G  +V ++  SE +  + K+LGAD  I+   E+FV  V + 
Sbjct: 219 ILGGGP-IGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDY 277
Query: 204 TGGKGVDVILDCMG 217
           T G G  + L+  G
Sbjct: 278 TNGLGAKLFLEATG 291

>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 11/162 (6%)
Query: 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVA 198
           GE+  V   S  +G    Q+ K  G  V  +AGS+EK+ + K   G D   NYK E  + 
Sbjct: 156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLT 215
Query: 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTE-----LNITSLF 253
              +     G+D+  + +G       L ++N+ GR+ + G       E      N++++ 
Sbjct: 216 AALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNII 275
Query: 254 AKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV 295
            KR  +Q  G       +K    S+  + V P I  GK+  V
Sbjct: 276 YKRNRIQ--GFVVSDFYDK---YSKFLEFVLPHIREGKITYV 312

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 143/357 (40%), Gaps = 56/357 (15%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MK+I+I +P     L + E E P     EV +KV+   +  +D+   +G  P  K    Y
Sbjct: 21  MKSILIEKPNQ---LSIIEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAK----Y 73
Query: 61  P---GLECSGTILSVGKNVSRWKVGDQVC------------------------ALLG--- 90
           P   G E  G I +VG+ V   +VG++V                         A+LG   
Sbjct: 74  PRVIGHEFFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHA 133
Query: 91  GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGE--SFLVHG- 147
            GG++E   VPA     +P  V+  D  A      T+ + V  T H  P E  + LV+G 
Sbjct: 134 DGGFSEYAVVPAKNAWKIPEAVA--DQYAVMIEPFTIAANV--TGHGQPTENDTVLVYGA 189
Query: 148 GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK 207
           G  G+    +  G      V V    +E+L   K+ GAD  IN  ++  +     E G K
Sbjct: 190 GPIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAIN-NSQTPLGESFAEKGIK 248
Query: 208 GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR 267
              +I      S  +  +   +   R+ ++G      +E+    +  K L++      SR
Sbjct: 249 PTLIIDAACHPSILKEAVTLASPAARIVLMGFS-SEPSEVIQQGITGKELSI----FSSR 303
Query: 268 STENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQ-HIGKIML 323
              NK  +V +     W +  + K + +I         A+A  L E  Q H  K++L
Sbjct: 304 LNANKFPVVID-----WLSKGLIKPEKLITHTFDFQHVADAISLFELDQKHCCKVLL 355

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74
           +LQ ++  Q + DEVL+KV AT +   D + R   YP P  A    G E SG I ++G 
Sbjct: 19 FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPA--VLGHEGSGIIEAIGP 76
Query: 75 NVSRWKVGDQV 85
          NV+  +VGD V
Sbjct: 77 NVTELQVGDHV 87

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Query: 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCKDLGADVCINYKTED 195
           ++P  SF V  G+  +G  A+   K  G  + +     E +L + K LGA   IN KT+D
Sbjct: 188 VTPASSF-VTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQD 246
Query: 196 FVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGT-QGGAKTELNITSLF 253
            VA +KE T G GV+  L+  G+    ++ + +L I G++ ++G  Q G   + ++  L 
Sbjct: 247 PVAAIKEITDG-GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLL 305

>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp Length = 330

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 15  LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74
           + ++ +    +  D VLIKV  + +N  D L  K      +      G++ +GT++S   
Sbjct: 19  VHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--S 76
Query: 75  NVSRWKVGDQVCAL---LG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW 128
           N  R+  GD+V A    LG    GG +E  +VP   ++P+P  +SLK+A  +     T  
Sbjct: 77  NDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAXVYGTAGFTAA 136
Query: 129 STVFMTSH--LSPGE-SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 185
            +V       LSP + S LV G + G+G  A+     +G  V  + G+ E     K LGA
Sbjct: 137 LSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSXLNKRGYDVVASTGNREAADYLKQLGA 196
Query: 186 DVCIN 190
              I+
Sbjct: 197 SEVIS 201

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 80/355 (22%), Positives = 151/355 (42%), Gaps = 66/355 (18%)
Query: 13  EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-YPGLECSGTILS 71
           E L +++V  P+ + +EVLI++    + R D    KG         P   G E +GTI+ 
Sbjct: 14  EPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVE 73
Query: 72  VGKNVSRWKVGDQVC--ALLG-------------------------GGGYAEKVAVPAGQ 104
           VG+ +++ K GD V   A  G                          GG++E + V + +
Sbjct: 74  VGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSR 132
Query: 105 VLPVPSGVSLKDAAAFPEVACTVWSTV-----FMTSHLSPGESFLVHGGSSGIGTFAIQM 159
            L   + +S  +AA   +   T    +     F++    P    ++  G  G+  + IQ+
Sbjct: 133 WLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEP---VVIVNGIGGLAVYTIQI 189
Query: 160 GKC--QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217
            K   + + +   + S++      +LGAD     K  D  + + + T G G  + +D +G
Sbjct: 190 LKALMKNITIVGISRSKKHRDFALELGADYVSEMK--DAESLINKLTDGLGASIAIDLVG 247
Query: 218 ASYFQRNLGS-LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALI- 275
                 NLG  L  +G + ++G +G             KR++++A      +  NK L+ 
Sbjct: 248 TEETTYNLGKLLAQEGAIILVGMEG-------------KRVSLEAF---DTAVWNKKLLG 291
Query: 276 -----VSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325
                ++++E +V      GK+KP I K +PL +  +A   ++  +  G+ ++ P
Sbjct: 292 SNYGSLNDLE-DVVRLSESGKIKPYIIK-VPLDDINKAFTNLDEGRVDGRQVITP 344

>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadph Length = 353

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 136 HLSPG--ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-LAVCKDLGADVCINY 191
           H+S G  ++ +V G +   G+ A Q+G   G  RV    G++EK L +  +LG D  +NY
Sbjct: 151 HISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNY 210
Query: 192 KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
           KT +   +++E   G GVDV  D +G       +  +N +  + + G
Sbjct: 211 KTGNVAEQLREACPG-GVDVYFDNVGGDISNAVISQMNENSHIILCG 256

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 109/284 (38%), Gaps = 49/284 (17%)
Query: 15  LQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASPYP-GLECSGTILSV 72
           L+L++   P+ K+DEVL+++    +  +D      G         P   G E SGT++ V
Sbjct: 16  LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKV 75
Query: 73  GKNVSRWKVGDQV----------CALLGGGGY------------------AEKVAVPAGQ 104
           GKNV   K GD+V          C     G Y                  A      A  
Sbjct: 76  GKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADF 135
Query: 105 VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG 164
              +P  VSL++ A    ++  V +       L  G + LV G    IG  ++   K  G
Sbjct: 136 CHKLPDNVSLEEGALLEPLSVGVHACRRAGVQL--GTTVLVIGAGP-IGLVSVLAAKAYG 192
Query: 165 VRVFVTAGSEEKLAVCKDLGADVCI-----NYKTEDFVARVKEETGGKGVDVILDCMGAS 219
             V  TA S  +L V K+ GADV +       +    + R++   G    +V +DC G  
Sbjct: 193 AFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLP-NVTIDCSGNE 251
Query: 220 -------YFQRNLGSLNIDG---RLFIIGTQGGAKTELNITSLF 253
                     R  G+L + G   ++  +        E++I S+F
Sbjct: 252 KCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVF 295

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 106/276 (38%), Gaps = 62/276 (22%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
           KA V  + G P  L ++E+E    K  EV IK+ ATA+   D     G+   P+G  P  
Sbjct: 8   KAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCFPVI 63
Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALL------------GGGGYAEKVAVPAGQVLPV 108
            G E +G + SVG+ V++ K GD V  L                   +K+ V  G+ L +
Sbjct: 64  LGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL-M 122
Query: 109 PSGVS-----------LKDAAAFPE-----------------------VAC---TVWSTV 131
           P G S               + F E                       + C   T +   
Sbjct: 123 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 182
Query: 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190
             T+ L PG    V  G  G+G   I   K  G  R+     +++K A  K+ GA  CIN
Sbjct: 183 VNTAKLEPGSVCAVF-GLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 241
Query: 191 YKTEDFVARVKE---ETGGKGVDVILDCMGASYFQR 223
              +DF   ++E   E    GVD   +C+G     R
Sbjct: 242 --PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMR 275

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 106/276 (38%), Gaps = 62/276 (22%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
           KA V  + G P  L ++E+E    K  EV IK+ ATA+   D     G+   P+G  P  
Sbjct: 9   KAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCFPVI 64
Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALL------------GGGGYAEKVAVPAGQVLPV 108
            G E +G + SVG+ V++ K GD V  L                   +K+ V  G+ L +
Sbjct: 65  LGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL-M 123
Query: 109 PSGVS-----------LKDAAAFPE-----------------------VAC---TVWSTV 131
           P G S               + F E                       + C   T +   
Sbjct: 124 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 183
Query: 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190
             T+ L PG    V  G  G+G   I   K  G  R+     +++K A  K+ GA  CIN
Sbjct: 184 VNTAKLEPGSVCAVF-GLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 242
Query: 191 YKTEDFVARVKE---ETGGKGVDVILDCMGASYFQR 223
              +DF   ++E   E    GVD   +C+G     R
Sbjct: 243 --PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMR 276

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 106/276 (38%), Gaps = 62/276 (22%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
           KA V  + G P  L ++E+E    K  EV IK+ ATA+   D     G+   P+G  P  
Sbjct: 9   KAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCFPVI 64
Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALL------------GGGGYAEKVAVPAGQVLPV 108
            G E +G + SVG+ V++ K GD V  L                   +K+ V  G+ L +
Sbjct: 65  LGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL-M 123
Query: 109 PSGVS-----------LKDAAAFPE-----------------------VAC---TVWSTV 131
           P G S               + F E                       + C   T +   
Sbjct: 124 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 183
Query: 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190
             T+ L PG    V  G  G+G   I   K  G  R+     +++K A  K+ GA  CIN
Sbjct: 184 VNTAKLEPGSVCAVF-GLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 242
Query: 191 YKTEDFVARVKE---ETGGKGVDVILDCMGASYFQR 223
              +DF   ++E   E    GVD   +C+G     R
Sbjct: 243 --PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMR 276

>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 6/127 (4%)
Query: 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVA 198
           GE+  V   S  +G    Q  K  G  V  +AGS+EK+ + K   G D   NYK E  ++
Sbjct: 154 GETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLS 213
Query: 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTE-----LNITSLF 253
              +     G+D+  + +G       L ++ + GR+ + G       E      N+  L 
Sbjct: 214 AALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLI 273
Query: 254 AKRLTVQ 260
            KR+ ++
Sbjct: 274 TKRIRME 280

>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily Protein (np_718042.1) From Shewanella Oneidensis At 1.55 A Resolution Length = 315

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
Query: 17  LQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV 76
           L  V+ P +  D++L++ +A  +N  D    K + P        PG++ +G I+ VG  V
Sbjct: 19  LNSVDIPALAADDILVQNQAIGINPVDWKFIKAN-PINWSNGHVPGVDGAGVIVKVGAKV 77
Query: 77  SRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW 128
               +G +V    +L   G +AE   +   +V  +P  +S + AAA P    T W
Sbjct: 78  DSKXLGRRVAYHTSLKRHGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAW 132

>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent Oxidoreductase From Mus Musculus At 2.10 A Resolution Length = 363

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 136 HLSPG--ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-LAVCKDLGADVCINY 191
           H+S G  ++ +V G +   G+ A Q+G   G  RV    G++EK L +  +LG D  +NY
Sbjct: 161 HISAGSNQTXVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNY 220
Query: 192 KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
           KT +   +++E   G GVDV  D +G       +   N +  + + G
Sbjct: 221 KTGNVAEQLREACPG-GVDVYFDNVGGDISNTVISQXNENSHIILCG 266

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 21/225 (9%)
Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESF----LVHGGSSGIGTFAIQMGKCQGV-R 166
           VS KD      +A    +T +      P ESF    +V  G+  +G F + + +  G   
Sbjct: 164 VSEKDDLDVLAMAMCSGATAYHAFDEYP-ESFAGKTVVIQGAGPLGLFGVVIARSLGAEN 222
Query: 167 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK---EETGGKGVDVILDCMGASYFQR 223
           V V AGS  +L + +++GAD+ +N +      R K   + T G+G D IL+  G S    
Sbjct: 223 VIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALL 282
Query: 224 NLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAA---GLRSRSTENKALIVSEVE 280
               L   G  + +   G A  +  +     + L ++ A   G+    T +    VS   
Sbjct: 283 EGSELLRRGGFYSVA--GVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITS 340
Query: 281 KNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325
           +N         +  +I   LPL EA +A +LMES + + K++L P
Sbjct: 341 RN------YQLLSKLITHRLPLKEANKALELMESREAL-KVILYP 378

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 105/276 (38%), Gaps = 62/276 (22%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
           KA V  + G P  L ++E+E    K  EV IK+ ATA+   D     G+   P+G  P  
Sbjct: 8   KAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCFPVI 63
Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALL------------GGGGYAEKVAVPAGQVLPV 108
            G   +G + SVG+ V++ K GD V  L                   +K+ V  G+ L +
Sbjct: 64  LGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL-M 122
Query: 109 PSGVS-----------LKDAAAFPE-----------------------VAC---TVWSTV 131
           P G S               + F E                       + C   T +   
Sbjct: 123 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 182
Query: 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190
             T+ L PG    V  G  G+G   I   K  G  R+     +++K A  K+ GA  CIN
Sbjct: 183 VNTAKLEPGSVCAVF-GLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 241
Query: 191 YKTEDFVARVKE---ETGGKGVDVILDCMGASYFQR 223
              +DF   ++E   E    GVD   +C+G     R
Sbjct: 242 --PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMR 275

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 43/222 (19%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           MK++V    G   ++++ E   P+IK  DEV +K+ ++ L  +D L R        GA  
Sbjct: 1   MKSVVNDTDG---IVRVAESVIPEIKHQDEVRVKIASSGLCGSD-LPRIFK----NGAHY 52
Query: 60  YP---GLECSGTILSVGKNVSRWKVGDQV---------------------CA---LLGG- 91
           YP   G E SG I +VG  V     GD V                     CA    +G  
Sbjct: 53  YPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSR 112
Query: 92  --GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGS 149
             GG+AE + V    V  +P+ + ++D A    +  TV    F  +     ++ ++ G  
Sbjct: 113 RDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPI--TVGLHAFHLAQGCENKNVIIIGAG 170
Query: 150 SGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCIN 190
           + IG  AIQ     G + V     S EKLA+ K  GA    N
Sbjct: 171 T-IGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFN 211

>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadp And 15-Keto-Pge2 Length = 357

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 136 HLSPG--ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-LAVCKDLGADVCINY 191
           H++ G  ++ +V G +   G+ A Q+G   G  RV    G+ EK + +  +LG D  INY
Sbjct: 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINY 214
Query: 192 KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
           K +D VA    E+   GVDV  D +G +     +  +N +  + + G
Sbjct: 215 K-KDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCG 260

>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And 18beta-Glycyrrhetinic Acid Length = 357

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 136 HLSPG--ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-LAVCKDLGADVCINY 191
           H++ G  ++ +V G +   G+ A Q+G   G  RV    G+ EK + +  +LG D  INY
Sbjct: 150 HITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINY 209
Query: 192 KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
           K +D VA    E+   GVDV  D +G +     +  +N +  + + G
Sbjct: 210 K-KDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCG 255

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 69/320 (21%), Positives = 124/320 (38%), Gaps = 45/320 (14%)
Query: 15  LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSV 72
           + ++ V  P+   D++L+KVEA  +   D     G +P  PP       G E  G ++  
Sbjct: 35  ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTPPVTL----GHEFCGIVVEA 90
Query: 73  GKNVSRWKVGDQV---------------------CALLGG------GGYAEKVAVPAGQV 105
           G  V     G ++                     C  L        GG+AE V VP  Q 
Sbjct: 91  GSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQA 150
Query: 106 LPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG- 164
             +P  +     A    +AC +       S +  G +  + GG   IG   +Q+ +  G 
Sbjct: 151 FEIPLTLDPVHGAFCEPLACCLHGVDL--SGIKAGSTVAILGGGV-IGLLTVQLARLAGA 207
Query: 165 VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG--GKGVDVILDCMG-ASYF 221
             V ++     K  + +++GA   ++    D V  +    G    GVDV+++C G A   
Sbjct: 208 TTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETV 267
Query: 222 QRNLGSLNIDGRLFIIGT-QGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVS--- 277
           +++       G + I+G    G K E+    +  + L V  + +        A +V+   
Sbjct: 268 KQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFVHRRAADLVATGA 327
Query: 278 -EVEKNVWPAIAVGKVKPVI 296
            E+++ +   I++ +   VI
Sbjct: 328 IEIDRXISRRISLDEAPDVI 347

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	325
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	0.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	0.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	1e-171
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	1e-168
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	1e-160
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	1e-155
4eye_A	342	Probable oxidoreductase; structural genomics, niai	1e-151
3gms_A	340	Putative NADPH:quinone reductase; structural genom	1e-151
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	1e-151
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	1e-138
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	1e-136
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	1e-121
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	1e-118
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	1e-113
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	1e-103
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	1e-102
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	1e-102
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	7e-99
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	5e-98
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	2e-95
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	1e-93
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	2e-87
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	2e-81
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	2e-76
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	1e-71
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	2e-70
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	9e-68
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	1e-64
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	2e-58
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	2e-53
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-49
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	7e-49
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	1e-48
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	2e-48
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-44
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	1e-44
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	6e-44
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	6e-43
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	1e-42
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	4e-41
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	1e-40
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	4e-38
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	5e-36
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	2e-35
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	2e-32
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	5e-30
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	8e-30
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	2e-29
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	2e-29
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	3e-22
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	3e-21
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	6e-21
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	1e-20
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	1e-19
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	6e-19
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	2e-18
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	6e-16
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	1e-15
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	2e-15
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	2e-15
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	3e-15
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	6e-15
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	8e-15
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	1e-14
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	1e-14
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	1e-13
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	2e-13
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	1e-12
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-05
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	6e-04
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	9e-04

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  539 bits (1391), Expect = 0.0
 Identities = 154/324 (47%), Positives = 207/324 (63%), Gaps = 2/324 (0%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+ + +   G P+V+ + +   P   + EVL++ EA  +NR D  QR+GSYPPPK ASP 
Sbjct: 29  MRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPI 88

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
            GLE SG I+ VG  VS + VGD+VC L  GG YAE   +PAGQ+LP P G     AAA 
Sbjct: 89  LGLELSGEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAAL 148

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
           PE   TVW+ +F  + L+ GES L+HGG+SGIGT AIQ+ +  G  V+ TAGS  K   C
Sbjct: 149 PETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEAC 208

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           + LGA   INY++EDF A +K ET G+GVD+ILD +GA+YF+RN+ SL  DG L II   
Sbjct: 209 ERLGAKRGINYRSEDFAAVIKAET-GQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFL 267

Query: 241 GGAKTE-LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKY 299
           GGA  E +N++ +  KRLTV  + +R R+ E K  I  ++   VWP +  G V PVI+K 
Sbjct: 268 GGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKV 327

Query: 300 LPLCEAAEAHQLMESSQHIGKIML 323
               + A+AH+L+E   H+GK+ML
Sbjct: 328 FAFEDVADAHRLLEEGSHVGKVML 351

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score =  533 bits (1376), Expect = 0.0
 Identities = 133/328 (40%), Positives = 197/328 (60%), Gaps = 5/328 (1%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M A+   +PG PE L ++EV  P   + EVL+KV A+ALNRAD +QR+G Y PP GAS  
Sbjct: 23  MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 82

Query: 61  PGLECSGTILSVGKNV-SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
            GLE SG +  +G      WK+GD   ALL GGG A+ V VP G ++P+P G++L  AAA
Sbjct: 83  LGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 142

Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
            PE   T +  + +  ++  G+  L+H G SG+GT AIQ+ +  G    VTAGS++KL +
Sbjct: 143 IPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM 202

Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
            + LGA    NYK EDF     + T G GV++ILDC+G SY+++N+  L +DGR  + G 
Sbjct: 203 AEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGL 262

Query: 240 QGGAKTELN-ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA---VGKVKPV 295
            GG        + L  KR ++  + LRSR  + K ++V+   + + P  +     ++ PV
Sbjct: 263 MGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPV 322

Query: 296 IYKYLPLCEAAEAHQLMESSQHIGKIML 323
           + +  P+ E  EAH+ ME++++IGKI+L
Sbjct: 323 LDRIYPVTEIQEAHKYMEANKNIGKIVL 350

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  478 bits (1234), Expect = e-171
 Identities = 100/327 (30%), Positives = 170/327 (51%), Gaps = 9/327 (2%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+A+ + + G PEVL+L+ ++  P  KD +VLIKV A  +N  +T  R G+Y        
Sbjct: 30  MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPY 89

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAA 118
            PG + +G I +VG N S +K GD+V  +    GGYAE        V  +P  +  K  A
Sbjct: 90  TPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGA 149

Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA 178
           A      T +  +  ++ +  GES LVHG S G+G  A Q+ +  G+++  TAG+EE   
Sbjct: 150 AIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK 209

Query: 179 VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
           +    GA    N++  +++ ++K+  G KG+D+I++ +      ++L  L+  GR+ ++G
Sbjct: 210 IVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269

Query: 239 TQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYK 298
           ++G    E+N     AK  ++    L S + E      +     +   + +G +KPVI  
Sbjct: 270 SRGTI--EINPRDTMAKESSIIGVTLFSSTKEEFQQYAAA----LQAGMEIGWLKPVIGS 323

Query: 299 YLPLCEAAEAHQ-LMESSQHIGKIMLV 324
             PL + AEAH+ ++  S   GK++L+
Sbjct: 324 QYPLEKVAEAHENIIHGSGATGKMILL 350

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  469 bits (1210), Expect = e-168
 Identities = 90/342 (26%), Positives = 148/342 (43%), Gaps = 20/342 (5%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+V+   G    L+L     P+ +D E+ I+V+A  LN  D + R+G+   P      
Sbjct: 4   MRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLV 63

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG ECSG + ++G +V  +++GD+V A +    +AE V  P   V  +P  +S  +AAAF
Sbjct: 64  PGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAF 123

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
           P    T +  +F  ++L  G S LVH    G+G    Q+             S  K    
Sbjct: 124 PMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAI 183

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           KD      +  +  D+V  VK  +  +GVD++LDC+      + L  L   G   + G+ 
Sbjct: 184 KDSVTH--LFDRNADYVQEVKRIS-AEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSS 240

Query: 241 GGAKTE----------------LNITSLFAKRLTVQAAGL-RSRSTENKALIVSEVEKNV 283
                E                +N   L+ +   +    L      + +A ++  V + +
Sbjct: 241 NMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKL 300

Query: 284 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325
                  K+KPV+     L E  EA Q +    +IGK++L  
Sbjct: 301 IGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDV 342

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  448 bits (1156), Expect = e-160
 Identities = 112/350 (32%), Positives = 167/350 (47%), Gaps = 37/350 (10%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+V+   G PEVL++ ++  P+    EV ++++A ALN  D   RKG   P       
Sbjct: 1   MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHV 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLG---------------------------GGG 93
            G + SG + +VG  V  +  GD+V    G                            G 
Sbjct: 61  LGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGT 120

Query: 94  YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIG 153
           YAE V +P   + P P  +S ++AAA P    T W  V     + PG+  LV    SG+ 
Sbjct: 121 YAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVS 180

Query: 154 TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213
             AIQ+ K  G RV  TAGSE+KL   K LGAD  +NY   D+   V+  TGGKG D ++
Sbjct: 181 VAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVV 240

Query: 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA 273
           D  GA YF+  + +    GR+ I G   G +  L    +F ++L++  + + S+      
Sbjct: 241 DHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASK------ 294

Query: 274 LIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323
                    +   +  GK+KPV+ + LPL  AAE H+L+E  +  GK++L
Sbjct: 295 ----SRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVL 340

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  437 bits (1126), Expect = e-155
 Identities = 78/342 (22%), Positives = 136/342 (39%), Gaps = 20/342 (5%)

Query: 1   MKAIVITQPGSPE------------VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK 48
           MKA+++   G  +             L+   +  P     +VLIKV   ++N +D    K
Sbjct: 11  MKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIK 70

Query: 49  GSYPPPKGASPYPGLECSGTILSVGKNV-SRWKVGDQVC---ALLGGGGYAEKVAVPAGQ 104
           G Y  P+      G E  GTI++ G    ++  VG +V     L   G +AE     A  
Sbjct: 71  GQYGQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAA 130

Query: 105 VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG 164
            +P+   V  +D AA      T  + +F        ++F++  G+S +    I + K +G
Sbjct: 131 CIPLLDTVRDEDGAAMIVNPLTAIA-MFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEG 189

Query: 165 VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN 224
            R  VT   +E++A+ KD+GA   +N K  DF A ++E    +   + LD +        
Sbjct: 190 FRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGPLASAI 249

Query: 225 LGSLNIDGRLFIIGTQGGAKTEL-NITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV 283
             ++    R  I G      T +     L  +   ++   L     + K      + +  
Sbjct: 250 FNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILE-A 308

Query: 284 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325
               + G+    +   +PL EA  A    E ++  GK+ + P
Sbjct: 309 QKRFSDGRWSTDVTAVVPLAEAI-AWVPAELTKPNGKVFIRP 349

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  428 bits (1102), Expect = e-151
 Identities = 97/325 (29%), Positives = 149/325 (45%), Gaps = 4/325 (1%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAI       PE L   +VE P    + V++ V+A  +   D L  KG Y         
Sbjct: 22  MKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFV 81

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG+E +G + S  +  S  K GD+V A    GGYAE+VAV    +LP P  +   +A A 
Sbjct: 82  PGIETAGVVRSAPE-GSGIKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVAL 140

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
                T++        L  GE+ LV G + GIGT AIQ+ K  G +V             
Sbjct: 141 IANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFV 200

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
           K +GAD+ +    E +   V+E TGG GVD+++D +G   F   + +L  +GRL ++G  
Sbjct: 201 KSVGADIVLPL-EEGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFA 259

Query: 241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
            G    + +  L  +  ++             A  + E +  +   +A G ++P +   +
Sbjct: 260 AGGIPTIKVNRLLLRNASLIGVAWG-EFLRTHADYLYETQAGLEKLVAEG-MRPPVSARI 317

Query: 301 PLCEAAEAHQLMESSQHIGKIMLVP 325
           PL E  +A Q     +  GK++LVP
Sbjct: 318 PLSEGRQALQDFADGKVYGKMVLVP 342

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  427 bits (1101), Expect = e-151
 Identities = 78/328 (23%), Positives = 134/328 (40%), Gaps = 4/328 (1%)

Query: 1   MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
            K I   + G+P +VLQ++      +KD+EV +++    +N +D +   G+Y        
Sbjct: 5   GKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPN 64

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
            PG E  G + +VG  VSR  +G +V  L G G + E V   A  V+P+P  +    AA 
Sbjct: 65  IPGYEGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQ 124

Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
                 T W T   T +L   +  LV+   S IG    Q+ +    R+     + +    
Sbjct: 125 MYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEE 184

Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
              LGA   I+  T      V E T G G D  +D +G         SL  +G    IG 
Sbjct: 185 LLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGL 244

Query: 240 QGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV-IYK 298
             G +       +   ++      LR  + E       E  +++   +   +++ + ++ 
Sbjct: 245 LSGIQVNWAEI-VTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHS 303

Query: 299 YLPLCEAAEAHQLMESSQHI-GKIMLVP 325
              L +   A  +++S++   GK+ L  
Sbjct: 304 TYELADVKAAVDVVQSAEKTKGKVFLTS 331

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score =  424 bits (1093), Expect = e-151
 Identities = 99/323 (30%), Positives = 154/323 (47%), Gaps = 23/323 (7%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ + G P  L+L ++ +P+ ++ EV+++VEA  LN AD L R G+Y         
Sbjct: 1   MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFI 58

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG+E  G +            G +  AL+  GG AE+VAVP G +LP+P G+S ++AAAF
Sbjct: 59  PGMEVVGVV-----------EGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAF 107

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
           P    T +      +   PGE  LV   +  +GT A+Q+ +  G+RV   A   EKLA+ 
Sbjct: 108 PVSFLTAYL-ALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP 166

Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
             LGA+    Y         +      G+D++L+  G    + +LG L   GRL  IG  
Sbjct: 167 LALGAEEAATYAEV-----PERAKAWGGLDLVLEVRGK-EVEESLGLLAHGGRLVYIGAA 220

Query: 241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
            G    +    L  + L V   G        +  +V E    + P +   +++PV+    
Sbjct: 221 EGEVAPIPPLRLMRRNLAV--LGFWLTPLLREGALVEEALGFLLPRLG-RELRPVVGPVF 277

Query: 301 PLCEAAEAHQLMESSQHIGKIML 323
           P  EA  A + +    H GK+++
Sbjct: 278 PFAEAEAAFRALLDRGHTGKVVV 300

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  393 bits (1011), Expect = e-138
 Identities = 84/335 (25%), Positives = 147/335 (43%), Gaps = 21/335 (6%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M A V+ +   P VL+  ++  PQ    +VL+++EA+  N  D   R G  P  +   P 
Sbjct: 8   MIAAVVEEANGPFVLR--KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPA 65

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSL 114
             G++ +GT+++VG  V  ++VGD V  L GG     G +A+  AV A  +   P+ +++
Sbjct: 66  ILGMDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTM 125

Query: 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174
           + A+  P V  T W  +   + +  G++ L+ GG  G+G  AIQ+   +G RVF TA   
Sbjct: 126 RQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATA-RG 184

Query: 175 EKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL 234
             L   +DLGA      +  +      E T G+G D++ D +G      +  ++   G +
Sbjct: 185 SDLEYVRDLGATPIDASREPED--YAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHV 242

Query: 235 FIIGTQGGAKTELNITSLFAKRLTVQAA-GLRSRSTENKALIVSEVEKNVWPAIAVGKVK 293
                 G       +  L  K+ T      L +           E+ +     +  GK+ 
Sbjct: 243 VSCLGWGTH----KLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLA 298

Query: 294 PVI-YKYLPLCEAAEAHQLM----ESSQHIGKIML 323
           P +  +   + E   A+  +    +  +  GKI +
Sbjct: 299 PRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAI 333

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  390 bits (1003), Expect = e-136
 Identities = 92/347 (26%), Positives = 151/347 (43%), Gaps = 37/347 (10%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+     +  +P  L+L E   P+  + +++++  A +LN  D L  +            
Sbjct: 28  MQEWST-ETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFV 86

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCAL---------------------LGG---GGYAE 96
           P  + SG + +VGK+V+R++ GD+V +                      LGG   G  +E
Sbjct: 87  PASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSE 146

Query: 97  KVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFA 156
            V +P G  +  P  +   +A+  P    T W  +    HL  G+  +V G + G+  F 
Sbjct: 147 YVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFG 205

Query: 157 IQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216
           +Q+ K  G  V VT+ S EKL     LGAD  IN   ED+V RV   TG +G D IL+  
Sbjct: 206 LQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIA 265

Query: 217 GASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIV 276
           G +   ++L ++  DGR+ +IG   G +    +  L  K   VQ   +  R         
Sbjct: 266 GGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHR--------- 316

Query: 277 SEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323
               +++  A+    +KPVI       E  EA   ++     GK+++
Sbjct: 317 -RALEDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLD-RGPFGKVVI 361

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  353 bits (907), Expect = e-121
 Identities = 85/343 (24%), Positives = 141/343 (41%), Gaps = 28/343 (8%)

Query: 1   MKAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
           M+ +V+T+        V   ++   P   D ++L++     +N +D     G Y P    
Sbjct: 24  MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP 83

Query: 58  SPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
               G E  G ++++G + S      Q  A +  G +AE   VPA    PVPS     + 
Sbjct: 84  PFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATPVPSVKP--EY 141

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
                   T + ++     LS G+  LV   + G G FA+Q+ K     V  T  S+EK 
Sbjct: 142 LTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKS 201

Query: 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
           A  K LG D  INYKTE     +K +   +GVDV+ + +G + F   + +L   GRL +I
Sbjct: 202 AFLKSLGCDRPINYKTEPVGTVLK-QEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVI 260

Query: 238 GTQGGAKTELNIT---------SLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 288
           G   G +T   ++          L  K  +VQ   L    ++ +A +      ++     
Sbjct: 261 GFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAM-----SHLLEMCV 315

Query: 289 VGKVKPVI--------YKYLPLCEAAEAHQLMESSQHIGKIML 323
            G +   +         ++  L     A   M   ++ GKI++
Sbjct: 316 SGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 358

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  343 bits (883), Expect = e-118
 Identities = 95/330 (28%), Positives = 147/330 (44%), Gaps = 5/330 (1%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGAS-P 59
           + A VI + G P+    +EV+       +V ++  A  +N  DT  R G   P      P
Sbjct: 2   VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPP 61

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDA 117
              G E +  +  VG  V+ + VG++VC  L   G Y+++   PA +++ VP  + L D 
Sbjct: 62  IVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDV 121

Query: 118 --AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175
             A       T    +  T  + PG+  L+H  + G+G   +   +  G  V  T  +EE
Sbjct: 122 HLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEE 181

Query: 176 KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235
           K    + LG    INY T+DF   V+E TGGKGVDV+ D +G    Q++L  L   G   
Sbjct: 182 KAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCA 241

Query: 236 IIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV 295
             G   G    + +      R ++           +    + E  K ++ A+  G +   
Sbjct: 242 AYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSS 301

Query: 296 IYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325
           + K  PL EAA AH+ M   Q IG I+L+P
Sbjct: 302 VAKTFPLREAAAAHKYMGGRQTIGSIVLLP 331

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  332 bits (853), Expect = e-113
 Identities = 69/329 (20%), Positives = 127/329 (38%), Gaps = 6/329 (1%)

Query: 1   MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           ++A+V    G P +V++L+ +E   ++  +V +K+ A  +N +D    +G+Y        
Sbjct: 27  VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPA 86

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDAA 118
             G E    +++VG NV+  K GD V     G G +  +       ++ VPS + L+ AA
Sbjct: 87  VGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAA 146

Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA 178
                 CT +  +     L PG+S + +  +SG+G   IQ+    G+R          + 
Sbjct: 147 TLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQ 206

Query: 179 ----VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL 234
                 K LGA+  I  +                  + L+C+G       L  L   G +
Sbjct: 207 KLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTM 266

Query: 235 FIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP 294
              G         +++ L  K L ++   L     ++      E+   +   I  G++  
Sbjct: 267 VTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTA 326

Query: 295 VIYKYLPLCEAAEAHQLMESSQHIGKIML 323
                +PL +   A +         K +L
Sbjct: 327 PACSQVPLQDYQSALEASMKPFISSKQIL 355

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score =  304 bits (780), Expect = e-103
 Identities = 97/327 (29%), Positives = 153/327 (46%), Gaps = 9/327 (2%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            K I+I + G  +V++ ++   P I ++E+LIK + T +N  ++  RKG YP  K   PY
Sbjct: 9   QKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEK---PY 65

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVS---LKD 116
             G E SGT+++ GK V+ ++VGDQV  +              G V+ +P G S   LK 
Sbjct: 66  VLGREASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKLPKGTSDEELKL 125

Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176
            AA      T  S      H+  G+  L+   + G+G    Q+ K +G      A ++EK
Sbjct: 126 YAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEK 185

Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236
           L + K+ GA+  IN   ED + +V + T GKGVD   D +G   F+ +L +L   G    
Sbjct: 186 LKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVS 245

Query: 237 IGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVI 296
            G   G     +IT L  K +T+    L     + +           +  +   K+   I
Sbjct: 246 FGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEW--KYYSDEFFGLVNSKKLNIKI 303

Query: 297 YKYLPLCEAAEAHQLMESSQHIGKIML 323
           YK  PL +   A   +ES + +GK++L
Sbjct: 304 YKTYPLRDYRTAAADIESRKTVGKLVL 330

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  301 bits (773), Expect = e-102
 Identities = 101/328 (30%), Positives = 152/328 (46%), Gaps = 7/328 (2%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            K I  +  G PEVL+  + E        V+++ +A  LN  DT  R G YP P    P 
Sbjct: 2   AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAP--FLPS 59

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQVC-ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAA 118
             G E +G + +VG  V+R+KVGD+V       G Y+E   +P   ++ +   VS + AA
Sbjct: 60  GLGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAA 119

Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA 178
           A      TV   +  T  + PGE  L H  + G+G+ A Q  K  G ++  T  S EK A
Sbjct: 120 ALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAA 179

Query: 179 VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
             K LGA   I+Y  ED   RV E T GK   V+ D +G   +  +L S+   G +   G
Sbjct: 180 HAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFG 239

Query: 239 TQGGAKTELNITSLFAKR-LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIY 297
              G  + +N+  L  K  + V    L S +   + L     E  ++  +A GK+K    
Sbjct: 240 NASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADE--LFDMLASGKLKVDGI 297

Query: 298 KYLPLCEAAEAHQLMESSQHIGKIMLVP 325
           +   L +AA+A   + + +  G  +L+P
Sbjct: 298 EQYALKDAAKAQIELSARRTTGSTILIP 325

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  300 bits (771), Expect = e-102
 Identities = 92/331 (27%), Positives = 149/331 (45%), Gaps = 27/331 (8%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAI   Q G P+VL+L +   P+ + +++LIKV A +LN  D   R GS    K     
Sbjct: 7   MKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNN 66

Query: 61  ----PGLECSGTILSVGKNVSRWKVGDQVCALLG----GGGYAEKVAVPAGQVLPVPSGV 112
                G + SG ++ +G +V+   +GD+V  + G       YAE V      ++     +
Sbjct: 67  LPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKL 126

Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172
           S   AA+ P    T        + +  G+  L+H G+ G+G  AIQ+ K +G  V  TA 
Sbjct: 127 SFLQAASLPTAGLTAL-QALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA- 184

Query: 173 SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
           S+   A  K LGA+ CINY  EDF+  +        VD ++D +G     +++  L   G
Sbjct: 185 SKRNHAFLKALGAEQCINYHEEDFLLAIST-----PVDAVIDLVGGDVGIQSIDCLKETG 239

Query: 233 RLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKV 292
            +  + T    +         AK+   +A GL  +          E    +   ++  K+
Sbjct: 240 CIVSVPTITAGRVI-----EVAKQKHRRAFGLLKQFN-------IEELHYLGKLVSEDKL 287

Query: 293 KPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323
           +  I +   L EA  AH+L+E+    GK++ 
Sbjct: 288 RIEISRIFQLSEAVTAHELLETGHVRGKLVF 318

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =  293 bits (753), Expect = 7e-99
 Identities = 106/330 (32%), Positives = 157/330 (47%), Gaps = 9/330 (2%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
              I   + G PEVLQ  E       ++E+ ++ +A  +N  DT  R G YPPP    P 
Sbjct: 2   ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPS--LPS 59

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQVC-ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAA 118
             G E +G +  VG  V   K GD+V  A    G Y+    + A +   +P+ +S + AA
Sbjct: 60  GLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAA 119

Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA 178
           A      TV+  +  T  + P E FL H  + G+G  A Q  K  G ++  T G+ +K  
Sbjct: 120 ASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ 179

Query: 179 VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
                GA   INY+ ED V R+KE TGGK V V+ D +G   ++R+L  L   G +   G
Sbjct: 180 SALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFG 239

Query: 239 TQGGAKTELNITSLFAKR-LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIY 297
              GA T +N+  L  K  L V    L+   T  + L  +  E  ++  IA G +K  + 
Sbjct: 240 NSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNE--LFSLIASGVIKVDVA 297

Query: 298 KY--LPLCEAAEAHQLMESSQHIGKIMLVP 325
           +    PL +A  AH+++ES    G  +L+P
Sbjct: 298 EQQKYPLKDAQRAHEILESRATQGSSLLIP 327

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  292 bits (750), Expect = 5e-98
 Identities = 75/361 (20%), Positives = 135/361 (37%), Gaps = 38/361 (10%)

Query: 1   MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPK 55
            +A++ TQ G P+     Q  E++D  +  +EV++K   + +N +D  Q +G YP  P K
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63

Query: 56  GASPY-------PGLECSGTILSVGKNVSRWKVGDQVC-ALLGGGGYAEKVAVPAGQVLP 107
                        G E    ++ VG NVS  + GD V  + +  G +           + 
Sbjct: 64  TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123

Query: 108 V-----------PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV-HGGSSGIGTF 155
           +           P+G+++   A       T +  +     L+PG+ + + +GG+S +G +
Sbjct: 124 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 183

Query: 156 AIQMGKCQGVRVFVTAGS----EEKLAVCKDLGADVCINYKTE---DFVARVKEET--GG 206
           A Q+GK                +E +A  K+LGA   I        +F   +KE     G
Sbjct: 184 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 243

Query: 207 KGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRS 266
               + L+C+G          LN +G +   G        +  +    K  T     +  
Sbjct: 244 GEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTE 303

Query: 267 RSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLME---SSQHIGKIML 323
               NK L  S + + +      GK+                H+L +   ++   GK ++
Sbjct: 304 LLKNNKELKTSTLNQ-IIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLI 362

Query: 324 V 324
            
Sbjct: 363 T 363

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  289 bits (740), Expect = 2e-95
 Identities = 76/388 (19%), Positives = 141/388 (36%), Gaps = 74/388 (19%)

Query: 1   MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M A + T+   P + + L +V  P++   E L+ V A+++N               G   
Sbjct: 43  MFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLE 102

Query: 60  Y-----------------PGLECSGTILSVGKNVSRWKVGDQVCAL-------------- 88
                              G + +G +L  G  V+ W+ GD+V A               
Sbjct: 103 RYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHND 162

Query: 89  -------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS 135
                           GG AE   V + Q++P P  +S ++AAA   V  T +  +   +
Sbjct: 163 TMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRN 222

Query: 136 --HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT 193
              +  G++ L+ G S G+G++A Q     G        S +K  +C+ +GA+  I+   
Sbjct: 223 GAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNA 282

Query: 194 E-----------------DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236
           E                  F  R++E TGG+ +D++ +  G   F  ++      G +  
Sbjct: 283 EGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITT 342

Query: 237 IGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVI 296
             +  G   E +   L+     +  +   +                    IA G++ P +
Sbjct: 343 CASTSGYMHEYDNRYLWMSLKRIIGSHFANY----------REAWEANRLIAKGRIHPTL 392

Query: 297 YKYLPLCEAAEAHQLMESSQHIGKIMLV 324
            K   L +  +A   +  + H GK+ ++
Sbjct: 393 SKVYSLEDTGQAAYDVHRNLHQGKVGVL 420

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score =  282 bits (722), Expect = 1e-93
 Identities = 62/375 (16%), Positives = 123/375 (32%), Gaps = 54/375 (14%)

Query: 1   MKAIVIT---QPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP----- 52
             A+ +    +      L L  ++ P    DEVLI++EA+ LN +D     G+       
Sbjct: 3   HSALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAK 62

Query: 53  -----------------------PPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL 89
                                      AS   G E +G ++  G + +   +  +  A +
Sbjct: 63  ASGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAI 122

Query: 90  GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGS 149
           GG  Y++   +PA Q L +P G +  D A+      T    +  T  L    + +    +
Sbjct: 123 GGAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALG-MVETMRLEGHSALVHTAAA 181

Query: 150 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
           S +G    Q+    G+++      +E+  + K  GA    N  +  F+  + E     G 
Sbjct: 182 SNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEALVSTGA 241

Query: 210 DVILDCMGASYFQRNLGSL-----------------NIDGRLFIIGTQGGAKTELNITSL 252
            +  D  G       + +                      ++++ G    + TE N    
Sbjct: 242 TIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFN--RN 299

Query: 253 FAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLM 312
           F     +    L     +      + +++ V   +          K + L E  +   + 
Sbjct: 300 FGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELK-TTFASHYSKEISLAEVLDLDMIA 358

Query: 313 ESSQHI--GKIMLVP 325
             ++     K ++ P
Sbjct: 359 VYNKRATGEKYLINP 373

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  268 bits (687), Expect = 2e-87
 Identities = 86/399 (21%), Positives = 145/399 (36%), Gaps = 84/399 (21%)

Query: 1   MKAIVITQ-----------PGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG 49
             A+ +                 + L+L EV  P++  DEVL+ V A+++N         
Sbjct: 25  YLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMF 84

Query: 50  SYPPPKGASPY-----------------PGLECSGTILSVGKNVSRWKVGDQVCA----- 87
              P                         G +CSG ++  G  V RWK GD V       
Sbjct: 85  EPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHV 144

Query: 88  ------------------LLGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125
                               G     GG AE   V A Q+LP P+ ++ ++AA  P  A 
Sbjct: 145 DEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAG 204

Query: 126 TVWSTVFMTS--HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL 183
           T +  +       +  G+  L+ G S G+G++AIQ  K  G        S +K A  + L
Sbjct: 205 TAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRAL 264

Query: 184 GADVCINYKTEDF-----------------VARVKEETGGKGVDVILDCMGASYFQRNLG 226
           G D+ IN                       +A++  E  G+  D++ +  G   F  ++ 
Sbjct: 265 GCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVI 324

Query: 227 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPA 286
                G +   G+  G     +   L+ K   +  +   +           E ++     
Sbjct: 325 VARRGGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANH----------EEQQATNRL 374

Query: 287 IAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325
              G V P +    PL EAAEA +++++S+ +GK+ ++ 
Sbjct: 375 FESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVLC 413

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score =  250 bits (641), Expect = 2e-81
 Identities = 88/356 (24%), Positives = 140/356 (39%), Gaps = 38/356 (10%)

Query: 1   MKAIVITQPGSPEVLQL-QEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGAS 58
             A VI + G  EVL+  Q +  P I   +EV++KV A ++N  D   R G         
Sbjct: 22  SMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMK 81

Query: 59  PY--------------PGLECSGTILSVGKNVSRWKVGDQVCALLG---GGGYAEKVAVP 101
                            G + SG ++  G +V  +K GD+V A +     G  +E V V 
Sbjct: 82  RDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVS 141

Query: 102 AGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL----SPGESFLVHGGSSGIGTFAI 157
             +V   P  ++   AA+ P VA T WS +     L      G+  L+ G S G+GTFAI
Sbjct: 142 GNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAI 201

Query: 158 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217
           Q+ K     V     S++   + + LGAD  I+YK+     ++K     K  D ILD +G
Sbjct: 202 QVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKS---LKPFDFILDNVG 257

Query: 218 ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVS 277
            S        L        +         ++     A  +      + S++ ++    V 
Sbjct: 258 GSTETWAPDFLKKWSGATYVTLVTPFLLNMD-RLGIADGMLQTGVTVGSKALKHFWKGVH 316

Query: 278 EVEKNVWPA----------IAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323
                   +          +  GK++PVI +  P  +  EA   +E     GK ++
Sbjct: 317 YRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVI 372

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  236 bits (605), Expect = 2e-76
 Identities = 78/342 (22%), Positives = 145/342 (42%), Gaps = 28/342 (8%)

Query: 1   MKAIVITQPGS---PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
           +KAI   QP       + +   ++ P+ K  E+L+K+++ ++N  DT QR          
Sbjct: 3   LKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSKA--- 59

Query: 58  SPY-PGLECSGTILSVGKNVSRWKVGDQVCA---LLGGGGYAEKVAVPAGQVLPVPSGVS 113
            P   G +  G + SVG  V+ +  GD V         G  AE   +    V   P  +S
Sbjct: 60  -PRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNIS 118

Query: 114 LKDAAAFPEVACTVWSTVF------MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRV 167
            + A + P    T + T+F         + + G++ L+  G+ G+G+ A Q+ K  G+RV
Sbjct: 119 AEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRV 178

Query: 168 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLG 226
             TA   E +   K +GAD+ +N+K         +  G + VD +        Y+   + 
Sbjct: 179 ITTASRNETIEWTKKMGADIVLNHKESLLNQ--FKTQGIELVDYVFCTFNTDMYYDDMIQ 236

Query: 227 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE--KNVW 284
            +   G    I T    + + ++ +L  K L+     + +R       ++   E  +++ 
Sbjct: 237 LVKPRGH---IATIVAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDIT 293

Query: 285 PAIAVGKVKPVI---YKYLPLCEAAEAHQLMESSQHIGKIML 323
             +     +P      + L      +AHQ++ES+  IGK+++
Sbjct: 294 NKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVI 335

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  224 bits (574), Expect = 1e-71
 Identities = 95/363 (26%), Positives = 147/363 (40%), Gaps = 54/363 (14%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+ + + G P  L LQE+  P+ K  +VLIKVEA  +  +D   R+G +   +     
Sbjct: 1   MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58

Query: 61  -------PGLECSGTILSVGKNVSRWKVGDQV-------------C----------ALLG 90
                   G E +G I  VG  V  +  GD V             C              
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118

Query: 91  G----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH 146
           G    G YAE V VP  + +     ++  +AA       T +  V   + L P ++ LV 
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVV 177

Query: 147 GGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205
           G   G+GT A+Q+ K   G  +      EE +   K  GAD  IN   +D +A ++  T 
Sbjct: 178 GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITE 237

Query: 206 GKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAA-- 262
            KGVD ++D   +         +L   G+  ++G  G      +   +    +    +  
Sbjct: 238 SKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA-DLHYHAPLITLSEIQFVGSLV 296

Query: 263 GLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIM 322
           G +S       L               GKVKP+I K + L EA EA   +E+ + IG+ +
Sbjct: 297 GNQSDFLGIMRL------------AEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQV 344

Query: 323 LVP 325
           L+P
Sbjct: 345 LIP 347

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  220 bits (563), Expect = 2e-70
 Identities = 60/331 (18%), Positives = 116/331 (35%), Gaps = 27/331 (8%)

Query: 1   MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+   +    +    + L  V+ P +  D++L++ +A  +N  D    K +       + 
Sbjct: 2   MEQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWS--NG 59

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQVCA---LLGGGGYAEKVAVPAGQVLPVPSGVSLK 115
           + PG++ +G I+ VG  V    +G +V     L   G +AE   +   +V+ +P  +S +
Sbjct: 60  HVPGVDGAGVIVKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFE 119

Query: 116 DAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175
            AAA P    T W   F    L+     L+  G   +     QM    G  V     +  
Sbjct: 120 RAAALPCPLLTAW-QAFEKIPLTKQREVLIV-GFGAVNNLLTQMLNNAGYVVD-LVSASL 176

Query: 176 KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235
             A+    G        ++            +    I D + +      + SL  +G + 
Sbjct: 177 SQALAAKRGVRHLYREPSQV----------TQKYFAIFDAVNSQNAAALVPSLKANGHII 226

Query: 236 IIGTQGGAKTELNITSLFAKRLT---VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKV 292
            I  +        I   F + ++   +    L          I+ +  + +   IA GK+
Sbjct: 227 CIQDRI----PAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKM 282

Query: 293 KPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323
           +          +  EA    E ++    + L
Sbjct: 283 EIAAPDIFRFEQMIEALDHSEQTKLKTVLTL 313

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score =  215 bits (549), Expect = 9e-68
 Identities = 73/341 (21%), Positives = 135/341 (39%), Gaps = 25/341 (7%)

Query: 1   MKAIVITQPG---SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
           MKA+   +P        L   E+  P     ++L++V+A ++N  D   R+ + P     
Sbjct: 23  MKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGT-- 80

Query: 58  SPY-PGLECSGTILSVGKNVSRWKVGDQV---CALLGGGGYAEKVAVPAGQVLPVPSGVS 113
                G + +G + +VG +V+ ++ GD+V    +++  G  AE   V    V   P  + 
Sbjct: 81  DWKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLD 140

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSP-----GESFLVHGGSSGIGTFAIQMGK-CQGVRV 167
             +AAA P  + T W   F    ++        + L+ GG+ G+G+ A+Q+ +    + V
Sbjct: 141 WAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTV 200

Query: 168 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS 227
             TA   E     K LGA   I++      A V     G    V        +       
Sbjct: 201 IATASRPETQEWVKSLGAHHVIDHSKPLA-AEVAALGLGAPAFVFSTTHTDKHAAEIADL 259

Query: 228 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE--KNVWP 285
           +   GR  +I          +I     K +++    + +R       +  +     +V  
Sbjct: 260 IAPQGRFCLIDDPS----AFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSR 315

Query: 286 AIAVGKVKPVIYKYLPLCEAA---EAHQLMESSQHIGKIML 323
            +  G+++  +   L    AA   +AH L+ES    GK+++
Sbjct: 316 LVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVI 356

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  207 bits (529), Expect = 1e-64
 Identities = 65/346 (18%), Positives = 122/346 (35%), Gaps = 41/346 (11%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             A+ +       V        P +  D+V ++VEA A+N +DT  R     P      +
Sbjct: 12  QTALTVNDHDEVTVWN--AAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFATPW----AF 65

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGG--------GGYAEKVAVPAGQVLPVPSGV 112
            G + +GT+++VG +V+  +VGD+V              G +++           +P G+
Sbjct: 66  LGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGL 125

Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSP------------GESFLVHGGSSGIGTFAIQMG 160
           S + AAA P    T    + +     P                LV+GGS+   T  +QM 
Sbjct: 126 SFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQML 185

Query: 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 220
           +  G     T  S     + K  GA+   +Y+  +    ++  T    +   LDC+    
Sbjct: 186 RLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNN-LRYALDCITNVE 243

Query: 221 FQRNLGSL--NIDGRLF-IIGTQGGAKTELNIT-------SLFAKRLTVQAAGLRSRSTE 270
                 +      G    +      A T   +T       ++F +  T  A   R  S E
Sbjct: 244 STTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEE 303

Query: 271 NKALIVSEVEKNVWPAIAVGKVKPVIYKYLP--LCEAAEAHQLMES 314
            +     ++ +     +  G++     + +        +  +L+  
Sbjct: 304 ERQFGE-DLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRK 348

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score =  200 bits (510), Expect = 2e-58
 Identities = 84/327 (25%), Positives = 143/327 (43%), Gaps = 21/327 (6%)

Query: 4   IVITQPGSPEVLQLQEVED--PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           +  T+PGS + L L +       + D EV I + A  +N  D L   G YP         
Sbjct: 213 LEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYPGV----ASL 268

Query: 62  GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP 121
           G E +G ++  G  V+    GD+V  +     +          V  +P+G S   AA+ P
Sbjct: 269 GSEGAGVVVETGPGVTGLAPGDRVMGM-IPKAFGPLAVADHRMVTRIPAGWSFARAASVP 327

Query: 122 EVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK 181
            V  T +  +   + L PGES LVH  + G+G  AIQ+ +  G  V+ TA  ++  AV  
Sbjct: 328 IVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAV-- 385

Query: 182 DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241
           +L  +   + +T DF  +    TGG+GVDV+L+ +   +   +L  L   GR   +G   
Sbjct: 386 ELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELG--- 442

Query: 242 GAKTELNIT---SLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYK 298
             KT++      +     ++ QA        E     + E+   +        ++P+   
Sbjct: 443 --KTDVRDPVEVADAHPGVSYQAFDT----VEAGPQRIGEMLHELVELFEGRVLEPLPVT 496

Query: 299 YLPLCEAAEAHQLMESSQHIGKIMLVP 325
              + +A EA + +  ++H+GK++L  
Sbjct: 497 AWDVRQAPEALRHLSQARHVGKLVLTM 523

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  177 bits (452), Expect = 2e-53
 Identities = 73/364 (20%), Positives = 140/364 (38%), Gaps = 62/364 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA ++ +   P  L +++V  P+ + +EVLI++    + R D    KG         P 
Sbjct: 4   SKAALLKKFSEP--LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPI 61

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQV----------C-------------ALLGG----G 92
             G E +GTI+ VG  +++ K GD V          C              ++ G    G
Sbjct: 62  ILGHENAGTIVEVG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNG 120

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTV---FMTSHLSPGESFLVH 146
           G++E + V + + L   + +S  +AA    +A    T    +               +V+
Sbjct: 121 GFSEYMLVKSSRWLVKLNSLSPVEAAP---LADAGTTSMGAIRQALPFISKFAEPVVIVN 177

Query: 147 GGSSGIGTFAIQMGK--CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET 204
           G   G+  + IQ+ K   + + +   + S++      +LGAD       +D  + + + T
Sbjct: 178 GI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSE--MKDAESLINKLT 234

Query: 205 GGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAA- 262
            G G  + +D +G           L  +G + ++G +G  +  L           +  + 
Sbjct: 235 DGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGK-RVSLEAFDTAVWNKKLLGSN 293

Query: 263 -GLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI 321
            G  +   +   L               GK+KP I K  PL +  +A   ++  +  G+ 
Sbjct: 294 YGSLNDLEDVVRL------------SESGKIKPYIIKV-PLDDINKAFTNLDEGRVDGRQ 340

Query: 322 MLVP 325
           ++ P
Sbjct: 341 VITP 344

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  168 bits (427), Expect = 2e-49
 Identities = 73/361 (20%), Positives = 137/361 (37%), Gaps = 58/361 (16%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+ +   G+   + ++ V  P+   D++L+KVEA  +   D     G +P      P 
Sbjct: 24  MKAVRLESVGN---ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTP---PV 77

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQV---------------------------CALLGGG 92
             G E  G ++  G  V     G ++                             +   G
Sbjct: 78  TLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDG 137

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG- 151
           G+AE V VP  Q   +P  +     A    +AC +       S +  G +  + GG  G 
Sbjct: 138 GFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGV--DLSGIKAGSTVAILGG--GV 193

Query: 152 IGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG--GKG 208
           IG   +Q+ +  G   V ++     K  + +++GA   ++    D V  +    G    G
Sbjct: 194 IGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGG 253

Query: 209 VDVILDCMGA-SYFQRNLGSLNIDGRLFIIG-TQGGAKTELNITSLFAKRLTVQAAGLRS 266
           VDV+++C G     +++       G + I+G    G K E+    +  + L V  +   +
Sbjct: 254 VDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGS-FIN 312

Query: 267 RSTENKALIVSEVEKNVWPAIAVGK--VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324
                +A             +A G   +  +I + + L EA +      ++  + K++++
Sbjct: 313 PFVHRRAA----------DLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEV-KVLVI 361

Query: 325 P 325
           P
Sbjct: 362 P 362

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  166 bits (422), Expect = 7e-49
 Identities = 80/363 (22%), Positives = 143/363 (39%), Gaps = 57/363 (15%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGAS- 58
           +KA  + +   P  L++++V+ P+++   +V++++    +   D    +G +        
Sbjct: 16  LKAARLHEYNKP--LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKL 73

Query: 59  PY-PGLECSGTILSVGKNVSRWKVGDQV-------------C----------ALLGG--- 91
           PY  G E  G I  V + V   + GD V             C              G   
Sbjct: 74  PYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNI 133

Query: 92  -GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMT-SHLSPGESFLVH 146
            GG+AE +      V+ +P  +S +       +A    T +  V      L PG    + 
Sbjct: 134 DGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIV 193

Query: 147 GGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205
           G   G+G  A+Q+ K      V      EEKL + + LGAD  ++ +  D V +V E T 
Sbjct: 194 GVG-GLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR-RDPVKQVMELTR 251

Query: 206 GKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAA-- 262
           G+GV+V +D +G+          L   GRL I+G   G +       + +  ++ + +  
Sbjct: 252 GRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGY--GGELRFPTIRVISSEVSFEGSLV 309

Query: 263 GLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIM 322
           G      E   L               GKV+  +  +  L E  +  + +E  + +G+ +
Sbjct: 310 GNYVELHELVTL------------ALQGKVRVEVDIH-KLDEINDVLERLEKGEVLGRAV 356

Query: 323 LVP 325
           L+P
Sbjct: 357 LIP 359

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  165 bits (419), Expect = 1e-48
 Identities = 75/366 (20%), Positives = 129/366 (35%), Gaps = 61/366 (16%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRAD--TLQRKGSYPPPKGA 57
           MK++V    G    +++ E   P+IK  DEV +K+ ++ L  +D   + + G++  P   
Sbjct: 1   MKSVVNDTDGI---VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPIT- 56

Query: 58  SPYPGLECSGTILSVGKNVSRWKVGDQV---------------------------CALLG 90
               G E SG I +VG  V     GD V                                
Sbjct: 57  ---LGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR 113

Query: 91  GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS 150
            GG+AE + V    V  +P+ + ++D A    +   + +     +     ++ ++ G   
Sbjct: 114 DGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAF--HLAQGCENKNVIIIGA-- 169

Query: 151 G-IGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 208
           G IG  AIQ     G   V     S EKLA+ K  GA    N                + 
Sbjct: 170 GTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRF 229

Query: 209 VDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT--ELNITSLFAKRLTVQAAGLR 265
             +IL+  G     +  +       +L ++GT              +  K LTV  + + 
Sbjct: 230 NQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMN 289

Query: 266 SRSTENKALIVSEVEKNVWP----AIAVGK--VKPVIYKYLPLCEAAEAHQLMESSQHIG 319
             S               W      +   K  ++P+I         A+A + +  +   G
Sbjct: 290 YSSPW---------PGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPG 340

Query: 320 KIMLVP 325
           K++L+P
Sbjct: 341 KVLLIP 346

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  164 bits (418), Expect = 2e-48
 Identities = 78/367 (21%), Positives = 132/367 (35%), Gaps = 64/367 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+  T+ GS     + ++  P     E+L+KV A  L  +D               P 
Sbjct: 1   MKAVQYTEIGSE--PVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPL 58

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQV-------------C-------------------A 87
             G E  GT+  +G+ V+ + VGD V             C                    
Sbjct: 59  TLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPG 118

Query: 88  LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC----TVWSTVFMTSHLSPGESF 143
           L   G  AE + V + + L     +    AA    +         +   +   L PG + 
Sbjct: 119 LGSPGSMAEYMIVDSARHLVPIGDLDPVAAAP---LTDAGLTPYHAISRVLPLLGPGSTA 175

Query: 144 LVHG-GSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 201
           +V G G  G+G   IQ+ +     RV      +++LA+ +++GAD  +          ++
Sbjct: 176 VVIGVG--GLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVK-SGAGAADAIR 232

Query: 202 EETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 260
           E TGG+G   + D +GA          + +DG + ++G   GA        +     +V 
Sbjct: 233 ELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAH-AKVGFFMIPFGASVV 291

Query: 261 AA--GLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHI 318
               G RS   E  AL               G++      +  L E   A++ +      
Sbjct: 292 TPYWGTRSELMEVVAL------------ARAGRLDIHTETF-TLDEGPAAYRRLREGSIR 338

Query: 319 GKIMLVP 325
           G+ ++VP
Sbjct: 339 GRGVVVP 345

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  156 bits (396), Expect = 1e-44
 Identities = 72/384 (18%), Positives = 137/384 (35%), Gaps = 77/384 (20%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
                + +      ++++EV +P+I K  E++IKV+A  +  +D    +           
Sbjct: 31  WLGSKVWRYPE---VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPG 87

Query: 60  Y------PGLECSGTILSVGKNV------SRWKVGDQVC--------------------- 86
                   G E SG ++  G          R+++G+ VC                     
Sbjct: 88  LTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHC 147

Query: 87  ------ALLGGGGYAEKVAVPAGQVLPVPSGVSLK------DAAAFPE-VACTVWSTVFM 133
                      G +AE V V A     +     +        A +  E  +    + +  
Sbjct: 148 ENLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVR 207

Query: 134 TSHLSPGESFLVHGGSSG-IGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINY 191
              + PG++ ++ GG  G IG  A+ + K  G   V ++  SE +  + K+LGAD  I+ 
Sbjct: 208 GGGIRPGDNVVILGG--GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDP 265

Query: 192 KTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGR----LFIIGTQGGAKTE 246
             E+FV  V + T G G  + L+  G        +  +    R       I  +  AK  
Sbjct: 266 TKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIP 325

Query: 247 LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPA----IAVG-KVKPVIYKYLP 301
           L       +R  +   G +  S               +P     +A G  +  +I K + 
Sbjct: 326 LTGEVFQVRRAQIV--GSQGHSGH-----------GTFPRVISLMASGMDMTKIISKTVS 372

Query: 302 LCEAAEAHQLMESSQHIGKIMLVP 325
           + E  E  + +++ + + K+ ++ 
Sbjct: 373 MEEIPEYIKRLQTDKSLVKVTMLN 396

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  154 bits (392), Expect = 1e-44
 Identities = 94/364 (25%), Positives = 152/364 (41%), Gaps = 62/364 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASP 59
           M AI+ T+PG     +L EV+ P+    EVLIKV AT++   D  +     +   +   P
Sbjct: 5   MVAIMKTKPG--YGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPP 62

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQV---------------------CALLGG------ 91
              G E +G ++ +G  V   +VGD V                     C           
Sbjct: 63  QIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTD 122

Query: 92  GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
           G +AE   VPA  +   P  +  + A     +   V +   + +    G+S L+ G  +G
Sbjct: 123 GVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDT---VLAGPISGKSVLITG--AG 177

Query: 152 -IGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
            +G   I + K  G   V V+  S+ +  + K +GAD  IN   ED V  V + T G GV
Sbjct: 178 PLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGV 237

Query: 210 DVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL-FAKRLTVQAAGLRSR 267
           DV L+  GA    ++ L ++   GR+ ++G     K  ++  +L   K LT+   G+  R
Sbjct: 238 DVFLEFSGAPKALEQGLQAVTPAGRVSLLGL-YPGKVTIDFNNLIIFKALTIY--GITGR 294

Query: 268 STENKALIVSEVEKNVWPA----IAVGK--VKPVI-YKYLPLCEAAEAHQLMESSQHIGK 320
                           W      +  GK  + P+I +KY    +  EA +LM + +  GK
Sbjct: 295 HL-----------WETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRAGKT-GK 342

Query: 321 IMLV 324
           ++ +
Sbjct: 343 VVFM 346

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  152 bits (387), Expect = 6e-44
 Identities = 87/350 (24%), Positives = 139/350 (39%), Gaps = 57/350 (16%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+   G+P  L + EV  PQ    +V +K+EA+ +   D     G +P        
Sbjct: 3   MKAAVVRAFGAP--LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFI 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV-----------C-------------ALLGG----G 92
           PG E  G + +VG  VSR K GD+V           C                 G    G
Sbjct: 61  PGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNG 120

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPGESFLVHGGS 149
           GY E V      V  +P  V   + A  P + C   TV+  +   +   PG+  ++ G  
Sbjct: 121 GYGEYVVADPNYVGLLPDKVGFVEIA--P-ILCAGVTVYKGL-KVTDTRPGQWVVISGIG 176

Query: 150 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
            G+G  A+Q  +  G+RV      + KL + + LGA+V +N +  D  A +++E G  G 
Sbjct: 177 -GLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIG--GA 233

Query: 210 DVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ--AAGLRS 266
             +L    +   F + +G +   G + + G   G      I  +  K +T++    G RS
Sbjct: 234 HGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGD-FGTPIFDVVLKGITIRGSIVGTRS 292

Query: 267 RSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQ 316
              E  +L  +          A G VK  +     L +  +    +   +
Sbjct: 293 DLQE--SLDFA----------AHGDVKATV-STAKLDDVNDVFGRLREGK 329

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  150 bits (380), Expect = 6e-43
 Identities = 94/353 (26%), Positives = 141/353 (39%), Gaps = 63/353 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ Q   P  L+++EVE P I   EVL++++A  +   D     G +P        
Sbjct: 1   MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58

Query: 61  PGLECSGTILSVGKNVSRWKVGD----------------------QVC--ALLGG----G 92
           PG E  G +  VG  V+  KVGD                       +C      G    G
Sbjct: 59  PGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDG 118

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPGESFLVHGGS 149
           GYAE     A  V+ +P  +S ++AA  P + C   T +  +   +   PGE   ++G  
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAA--P-IFCAGVTTYKAL-KVTGAKPGEWVAIYGIG 174

Query: 150 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
            G+G  A+Q  K  G+ V      +EKL + K+LGAD+ +N   ED    +KE+ G  GV
Sbjct: 175 -GLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVG--GV 231

Query: 210 DVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ--AAGLRS 266
              +    +   FQ    S+   G   ++G     +  + I       + +     G R 
Sbjct: 232 HAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE-EMPIPIFDTVLNGIKIIGSIVGTRK 290

Query: 267 RSTENKALIVSEVEKNVWPAI---AVGKVKPVIYKYLPLCEAAEAHQLMESSQ 316
              E               A+   A GKVK +I +  PL +  E    M   Q
Sbjct: 291 DLQE---------------ALQFAAEGKVKTII-EVQPLEKINEVFDRMLKGQ 327

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  149 bits (378), Expect = 1e-42
 Identities = 83/351 (23%), Positives = 146/351 (41%), Gaps = 55/351 (15%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            K ++  +      L+ +++  P+ K +E+LI V+ + +   D     G +P P      
Sbjct: 6   QKGVIFYESHGK--LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLV 63

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV-----------C-------------ALLGG----G 92
            G E +G ++ +G+NV  WK+GD             C             A L G    G
Sbjct: 64  GGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDG 123

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPGESFLVHGGS 149
            + +     A Q   +P G  L   A  P + C   TV+  +  +++L  G    + G +
Sbjct: 124 SFQQYATADAVQAAHIPQGTDLAQVA--P-ILCAGITVYKAL-KSANLMAGHWVAISGAA 179

Query: 150 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETGGKG 208
            G+G+ A+Q  K  G RV    G E K  + + +G +V I++ K +D V  V + T G G
Sbjct: 180 GGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDG-G 238

Query: 209 VDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ--AAGLR 265
              +++   +    + +   +  +G   ++G   GAK   ++ +   K +++     G R
Sbjct: 239 AHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNR 298

Query: 266 SRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQ 316
           + + E  AL             A G VK  I K + L    E ++ ME  Q
Sbjct: 299 ADTRE--ALDFF----------ARGLVKSPI-KVVGLSTLPEIYEKMEKGQ 336

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  145 bits (368), Expect = 4e-41
 Identities = 84/364 (23%), Positives = 141/364 (38%), Gaps = 62/364 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASP 59
           M+A+    P   E L L +   P+    E+L++VEA ++   D  + +  ++   +   P
Sbjct: 1   MRALAKLAPE--EGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPP 58

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQV---------------------------CALLGG 91
              G E SG + +VG  V R +VGD V                             +   
Sbjct: 59  LVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRD 118

Query: 92  GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
           GG+AE V VPA      P  +  + AA        V +          G+S L+ G  +G
Sbjct: 119 GGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTV--YAGSGVSGKSVLITG--AG 174

Query: 152 -IGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209
            IG  A  + +  G   + V+  +  +LA  +     + +N   ED +  V+  TG  GV
Sbjct: 175 PIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRL-VNPLEEDLLEVVRRVTGS-GV 232

Query: 210 DVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITS-LFAKRLTVQAAGLRSR 267
           +V+L+  G  +   + L +L   G   I+G         ++   L  + +T    G+  R
Sbjct: 233 EVLLEFSGNEAAIHQGLMALIPGGEARILGI-PSDPIRFDLAGELVMRGITAF--GIAGR 289

Query: 268 STENKALIVSEVEKNVWPA----IAVGK--VKPVIYKYLPLCEAAEAHQLMESSQHIGKI 321
                           W      +  G+  + P++   LPL    EA  L+ S Q + K+
Sbjct: 290 RL-----------WQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQAV-KV 337

Query: 322 MLVP 325
           +L P
Sbjct: 338 ILDP 341

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score =  150 bits (381), Expect = 1e-40
 Identities = 84/325 (25%), Positives = 134/325 (41%), Gaps = 12/325 (3%)

Query: 6    ITQPGSPEVLQLQEV---EDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPG 62
            +   G    ++               + L  V  T+LN  D +   G   P      +  
Sbjct: 1535 VLSRGDLSSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLT 1594

Query: 63   LECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122
             +C   +   G++      G +V  ++   G A  V +       VPS  +L++AA+ P 
Sbjct: 1595 RDCMLGMEFSGRDA----SGRRVMGMVPAEGLATSVLLLQHATWEVPSTWTLEEAASVPI 1650

Query: 123  VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 182
            V  T + ++ +   + PGES L+H GS G+G  AI +   +G RVF T GS EK A  + 
Sbjct: 1651 VYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQA 1710

Query: 183  ----LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
                L      N +   F   V   T GKGVD++L+ +     Q ++  L   GR   IG
Sbjct: 1711 RFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIG 1770

Query: 239  TQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYK 298
                +       ++F K +T     L S   E  A    EV + +   I  G V+P+   
Sbjct: 1771 KFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATW-QEVSELLKAGIQEGVVQPLKCT 1829

Query: 299  YLPLCEAAEAHQLMESSQHIGKIML 323
              P  +   A + M   +HIGK+++
Sbjct: 1830 VFPRTKVEAAFRYMAQGKHIGKVVI 1854

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  137 bits (348), Expect = 4e-38
 Identities = 78/366 (21%), Positives = 138/366 (37%), Gaps = 65/366 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASP 59
             ++V+  PG    L+L+    P+   +EVL+++ +  +  +D      G         P
Sbjct: 8   NLSLVVHGPGD---LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKP 64

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQVCA------------LLG---------------- 90
              G E SGT+  VG +V   K GD+V               +G                
Sbjct: 65  MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 124

Query: 91  GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS 150
            G         A     +P  V+ ++ A    ++  + +       ++ G   LV G  +
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHAC--RRGGVTLGHKVLVCG--A 180

Query: 151 G-IGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG--G 206
           G IG   + + K  G  +V VT  S  +L+  K++GAD+ +    E      ++  G  G
Sbjct: 181 GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLG 240

Query: 207 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLR 265
              +V ++C GA +  Q  + +    G L ++G  G   T + +     + + ++    R
Sbjct: 241 CKPEVTIECTGAEASIQAGIYATRSGGTLVLVGL-GSEMTTVPLLHAAIREVDIKGV-FR 298

Query: 266 SRSTENKALIVSEVEKNVWPA----IAVGK--VKPVIYKYLPLCEAAEAHQLMESSQHIG 319
                           N WP     +A     VKP++    PL +A EA +  +    + 
Sbjct: 299 YC--------------NTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGL- 343

Query: 320 KIMLVP 325
           KIML  
Sbjct: 344 KIMLKC 349

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  132 bits (334), Expect = 5e-36
 Identities = 79/368 (21%), Positives = 139/368 (37%), Gaps = 66/368 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASP 59
             + V+ +      L+L++   P+ K+DEVL+++    +  +D      G         P
Sbjct: 5   NLSAVLYKQND---LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDP 61

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQV---------------------CALLG------- 90
              G E SGT++ VGKNV   K GD+V                     C  L        
Sbjct: 62  MVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPD 121

Query: 91  GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS 150
            G  A      A     +P  VSL++ A    ++  V +     + +  G + LV G   
Sbjct: 122 DGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHAC--RRAGVQLGTTVLVIGA-- 177

Query: 151 G-IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVARVKEETG-- 205
           G IG  ++   K  G  V  TA S  +L V K+ GADV   ++   E+  + ++      
Sbjct: 178 GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAI 237

Query: 206 GKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGL 264
           G   +V +DC G        +      G L ++G  G     + + +  A+ + +++   
Sbjct: 238 GDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGM-GSQMVTVPLVNACAREIDIKSV-F 295

Query: 265 RSRSTENKALIVSEVEKNVWPA----IAVGK--VKPVIYKYLPLCEAAEA-HQLMESSQH 317
           R                N +P     +A G+  VK ++     L +  +A     + + +
Sbjct: 296 RYC--------------NDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADN 341

Query: 318 IGKIMLVP 325
             K+M+  
Sbjct: 342 TIKVMISC 349

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  131 bits (331), Expect = 2e-35
 Identities = 75/384 (19%), Positives = 131/384 (34%), Gaps = 82/384 (21%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             A+V+ +   P  L  +E E   I    +L+++ +  +  +D    +G  P      P 
Sbjct: 18  AHAMVLEKFNQP--LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRV----PL 71

Query: 61  P---GLECSGTILSVGKNVS-----RWKVGDQVCALLG---------------------- 90
           P   G E +G ++ V            K GD +    G                      
Sbjct: 72  PIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRK 131

Query: 91  --------------GGGYAEKVAV-PAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS 135
                          G Y+  + + P   VL V     L   A       T +       
Sbjct: 132 VYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYP 191

Query: 136 HLSPGESFLVHG-GSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCIN--- 190
               G++ ++ G G   +G F + + +  G   V V AGS  +L + +++GAD+ +N   
Sbjct: 192 ESFAGKTVVIQGAG--PLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE 249

Query: 191 YKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNI 249
              E+    + + T G+G D IL+  G +         L   G   + G     +  +  
Sbjct: 250 TSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAG-VAVPQDPVPF 308

Query: 250 ---TSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV---GKVK--PVIYKYLP 301
                L  K  T +   +   S             +    +++          +I   LP
Sbjct: 309 KVYEWLVLKNATFKGIWVSDTS-------------HFVKTVSITSRNYQLLSKLITHRLP 355

Query: 302 LCEAAEAHQLMESSQHIGKIMLVP 325
           L EA +A +LMES +   K++L P
Sbjct: 356 LKEANKALELMESRE-ALKVILYP 378

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score =  118 bits (298), Expect = 2e-32
 Identities = 44/137 (32%), Positives = 71/137 (51%)

Query: 102 AGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK 161
           +  V+P+P  ++  +AA F     T W ++     LSPGE  L+H  + G+G  A+ + K
Sbjct: 1   SDLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAK 60

Query: 162 CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF 221
             G R++ TAGS+ K  +   LG +   + ++ DF   + E T G GVDV+L+ +     
Sbjct: 61  MIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAI 120

Query: 222 QRNLGSLNIDGRLFIIG 238
           QR +  L   GR   +G
Sbjct: 121 QRGVQILAPGGRFIELG 137

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  116 bits (292), Expect = 5e-30
 Identities = 67/357 (18%), Positives = 131/357 (36%), Gaps = 68/357 (19%)

Query: 15  LQLQEVEDPQ-IKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASPY-PGLECSGTILS 71
             L+ V+  + +K+ EV + V +T +  +D    + G   P      +  G E +G +++
Sbjct: 27  PSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIA 86

Query: 72  VGKNVSRWKVGDQVCA------------LLG----------------GGGYAEKVAVPAG 103
           V  +V   KVGD+V              L G                 G     V  PA 
Sbjct: 87  VHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAV 146

Query: 104 QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG-IGTFAIQMGKC 162
               + + +S ++ A    ++  +       + +  G+  L+ G  +G IG   +   K 
Sbjct: 147 WCHKIGN-MSYENGAMLEPLSVALAGL--QRAGVRLGDPVLICG--AGPIGLITMLCAKA 201

Query: 163 QGV-RVFVTAGSEEKLAVCKDLGADVCINYK----TEDFVARVKEETGGKGVDVILDCMG 217
            G   + +T   E +L   K++  +V  +       E+   ++ E  GG    V L+C G
Sbjct: 202 AGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTG 261

Query: 218 A-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIV 276
             S     + ++   G++F+IG  G  + ++       + + +Q    R           
Sbjct: 262 VESSIAAAIWAVKFGGKVFVIGV-GKNEIQIPFMRASVREVDLQFQ-YRYC--------- 310

Query: 277 SEVEKNVWPA----IAVGK--VKPVIYKYLPLCEAAEAHQLMES--SQHIGKIMLVP 325
                N WP     +  G   +  ++    PL +A +A +      +  I K+ +  
Sbjct: 311 -----NTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAI-KVQIQS 361

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  115 bits (290), Expect = 8e-30
 Identities = 52/376 (13%), Positives = 113/376 (30%), Gaps = 77/376 (20%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASP 59
           MKAI + +    +   + E   P+ +  E L++     +   D  +   G    P+G   
Sbjct: 1   MKAIAVKRG--EDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDH 58

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQVCA------------------------------- 87
              G E  G +  V  N +  + GD V                                 
Sbjct: 59  LVLGHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERG 116

Query: 88  -LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE-VACTVW----STVFMTSHLSPGE 141
            +   G  +E    P   ++ +P   +  +     E ++ T      +    ++      
Sbjct: 117 IVGAHGYMSEFFTSPEKYLVRIPRSQA--ELGFLIEPISITEKALEHAYASRSAFDWDPS 174

Query: 142 SFLVHGGSSG-IGTFAIQMGKCQG------VRVFVTAGSEEKLAVCKDLGADVCINYKTE 194
           S  V G  +G +G   + M K           +      +  + + ++L A    +   +
Sbjct: 175 SAFVLG--NGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDS--RQ 230

Query: 195 DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNI---- 249
             V  V +      +D I +  G   +  +++ +L  +G   ++G       E++     
Sbjct: 231 TPVEDVPDVYE--QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFH 288

Query: 250 TSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK--VKPVIYKYLPLCEAAE 307
             +      +   G  +   E+                 + K  ++ ++    PL E   
Sbjct: 289 REMVLHNKALV--GSVNSHVEHFEAATVTF-------TKLPKWFLEDLVTGVHPLSEFEA 339

Query: 308 AHQLMESSQHIGKIML 323
           A    +      K  +
Sbjct: 340 A---FDDDDTTIKTAI 352

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  114 bits (288), Expect = 2e-29
 Identities = 56/385 (14%), Positives = 112/385 (29%), Gaps = 82/385 (21%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEAT--------ALNRADTLQRKGSY 51
           MKAI++  P     +Q+++V++ ++    ++ I+             +N      +    
Sbjct: 1   MKAIIVKPPN--AGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNG-----KLTLS 53

Query: 52  PPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQVCA----------------------- 87
             PKG      G E  G +            GD V                         
Sbjct: 54  TLPKGKDFLVLGHEAIGVVEESYHGF---SQGDLVMPVNRRGCGICRNCLVGRPDFCETG 110

Query: 88  ---LLGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE-VACTVW----------- 128
                G     G   E        ++ +P  +   D     + +A               
Sbjct: 111 EFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE--DIGILAQPLADIEKSIEEILEVQKR 168

Query: 129 -STVFMTSHLSPGESFLVHGGSSG-IGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGA 185
                           LV G  +G IG     + +  G+           ++        
Sbjct: 169 VPVWTCDDGTLNCRKVLVVG--TGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET 226

Query: 186 DVCINYKTEDFVARVKEETGGKGVDVILDCMG--ASYFQRNLGSLNIDGRLFIIGTQGGA 243
                Y + +   ++K+  G    DVI+D  G   +     +  L  +G L + G     
Sbjct: 227 KT-NYYNSSNGYDKLKDSVG--KFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSG 283

Query: 244 KTELN---ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 300
              L+   +  +     T+   GL +    +    V  +    W  +     K +I K +
Sbjct: 284 SVPLDYKTLQEIVHTNKTII--GLVNGQKPHFQQAVVHLAS--WKTLYPKAAKMLITKTV 339

Query: 301 PLCEAAEAHQLMESSQHIG-KIMLV 324
            + +  E  +++   +H   KI ++
Sbjct: 340 SINDEKELLKVLREKEHGEIKIRIL 364

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  114 bits (288), Expect = 2e-29
 Identities = 60/367 (16%), Positives = 119/367 (32%), Gaps = 58/367 (15%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MK   +   G        E E P     + +++  A A   +D           +     
Sbjct: 1   MKGFAMLSIGKVGW---IEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMIL 57

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV---------------------CALLGG-------- 91
            G E  G ++ VG  V  +K GD+V                        +          
Sbjct: 58  -GHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVK 116

Query: 92  -GGYAEKVAVPAGQV--LPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGG 148
            G + E   V    +    +P  + L+ A   P++  T +    + +++  G++  V G 
Sbjct: 117 DGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAEL-ANIKLGDTVCVIG- 174

Query: 149 SSG-IGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206
             G +G  ++      G  R+F     +    +  + GA   INYK  D V ++ + T G
Sbjct: 175 -IGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDG 233

Query: 207 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT---ELNITSLFAKRLTVQAA 262
           KGVD ++   G    F + +  +     +  +   G         +   +      +   
Sbjct: 234 KGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGG 293

Query: 263 GLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VI-YKYLPLCEAAEAHQLMESSQ-HI 318
                    + LI           +   +V P  ++ + +       +A  LM+     +
Sbjct: 294 LCPGGRLRMERLI---------DLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDL 344

Query: 319 GKIMLVP 325
            K +++ 
Sbjct: 345 IKPVVIL 351

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score = 94.9 bits (237), Expect = 3e-22
 Identities = 74/319 (23%), Positives = 116/319 (36%), Gaps = 72/319 (22%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           + A V    G+    +LQ ++  Q + DEVL+KV AT +   D + R   YP P      
Sbjct: 7   IIAAVTPCKGAD--FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVP-----L 59

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQVCAL----------------------------- 88
           P   G E SG I ++G NV+  +VGD V                                
Sbjct: 60  PAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGA 119

Query: 89  --------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV- 127
                                    +A          + V   V ++         C + 
Sbjct: 120 DSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPL---GCGIQ 176

Query: 128 --WSTVFMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDL 183
                      ++P  SF+  G G   +G  A+   K  G   +      E +L + K L
Sbjct: 177 TGAGACINALKVTPASSFVTWGAG--AVGLSALLAAKVCGASIIIAVDIVESRLELAKQL 234

Query: 184 GADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN-LGSLNIDGRLFIIG-TQG 241
           GA   IN KT+D VA +KE T G GV+  L+  G+    +  + +L I G++ ++G  Q 
Sbjct: 235 GATHVINSKTQDPVAAIKEITDG-GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQL 293

Query: 242 GAKTELNITSLFAKRLTVQ 260
           G   + ++  L     T+ 
Sbjct: 294 GTTAQFDVNDLLLGGKTIL 312

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 91.2 bits (227), Expect = 3e-21
 Identities = 60/270 (22%), Positives = 112/270 (41%), Gaps = 39/270 (14%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG------SYPPPK 55
           +A V+ +  +     +Q +    + + +VL++V  +++N  D L          +YP   
Sbjct: 5   QAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPF-- 62

Query: 56  GASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG--------GGYAEKVAVPAGQVLP 107
                PG++ +G ++S      R++ GD+V  +  G        GGY+E   +    ++P
Sbjct: 63  ----VPGIDLAGVVVS--SQHPRFREGDEV--IATGYEIGVTHFGGYSEYARLHGEWLVP 114

Query: 108 VPSGVSLKDAAAFPEVACTVWSTV--FMTSHLSPGE-SFLVHGGSSGIGTFAIQMGKCQG 164
           +P G++LK+A A      T   ++       L+P     LV G + G+G+ A+ M   +G
Sbjct: 115 LPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRG 174

Query: 165 VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG---GKGV-DVILDCMGASY 220
             V  + G   +    + LGA   +    ED +     E      K      +D +G   
Sbjct: 175 YTVEASTGKAAEHDYLRVLGAKEVLA--REDVM----AERIRPLDKQRWAAAVDPVGGRT 228

Query: 221 FQRNLGSLNIDGRLFIIGTQGGAKTELNIT 250
               L  +   G + + G  GGA+  +  T
Sbjct: 229 LATVLSRMRYGGAVAVSGLTGGAE--VPTT 256

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 90.4 bits (225), Expect = 6e-21
 Identities = 65/269 (24%), Positives = 108/269 (40%), Gaps = 37/269 (13%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG------SYPPPK 55
           +A+   +      + ++ +    +  D VLIKV  + +N  D L  K        YP   
Sbjct: 6   QALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPL-- 63

Query: 56  GASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG--------GGYAEKVAVPAGQVLP 107
                 G++ +GT++S   N  R+  GD+V  +           GG +E  +VP   ++P
Sbjct: 64  ----ILGIDAAGTVVS--SNDPRFAEGDEV--IATSYELGVSRDGGLSEYASVPGDWLVP 115

Query: 108 VPSGVSLKDAAAFPEVACTVW--STVFMTSHLSPGE-SFLVHGGSSGIGTFAIQMGKCQG 164
           +P  +SLK+A  +     T          + LSP + S LV G + G+G  A+ M   +G
Sbjct: 116 LPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRG 175

Query: 165 VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG---GKGV-DVILDCMGASY 220
             V  + G+ E     K LGA   I+   ED      + T     K      +D +G   
Sbjct: 176 YDVVASTGNREAADYLKQLGASEVIS--REDVY----DGTLKALSKQQWQGAVDPVGGKQ 229

Query: 221 FQRNLGSLNIDGRLFIIGTQGGAKTELNI 249
               L  +   G + + G  GG +    +
Sbjct: 230 LASLLSKIQYGGSVAVSGLTGGGEVPATV 258

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 89.7 bits (223), Expect = 1e-20
 Identities = 60/270 (22%), Positives = 111/270 (41%), Gaps = 39/270 (14%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG------SYPPP 54
           M+A+++ Q     +  +Q +E+ Q+   +V + V  ++LN  D L   G       +P  
Sbjct: 1   MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFP-- 58

Query: 55  KGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG--------GGYAEKVAVPAGQVL 106
                 PG++ +GT+ +      R+  G +V  LL G        GG AE+  V    ++
Sbjct: 59  ----MIPGIDFAGTVHA--SEDPRFHAGQEV--LLTGWGVGENHWGGLAERARVKGDWLV 110

Query: 107 PVPSGVSLKDAAAFPEVACTVWSTVF--MTSHLSPGE-SFLVHGGSSGIGTFAIQMGKCQ 163
            +P+G+S ++A        T    V     + + P +   +V G S G+G+ A+ +    
Sbjct: 111 ALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKL 170

Query: 164 GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG---GKGV-DVILDCMGAS 219
           G +V   +G E      K LGA+  ++   ++F             K +    +D +G  
Sbjct: 171 GYQVAAVSGRESTHGYLKSLGANRILS--RDEF------AESRPLEKQLWAGAIDTVGDK 222

Query: 220 YFQRNLGSLNIDGRLFIIGTQGGAKTELNI 249
              + L  +N  G +   G  GG      +
Sbjct: 223 VLAKVLAQMNYGGCVAACGLAGGFALPTTV 252

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 87.7 bits (218), Expect = 1e-19
 Identities = 72/408 (17%), Positives = 135/408 (33%), Gaps = 102/408 (25%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKD-------DEVLIKVEATALNRADTLQRKGSYPP 53
            + +V    G  EV   Q+++ P+++D         V++KV +T +  +D    +G    
Sbjct: 3   NRGVVYLGSGKVEV---QKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA 59

Query: 54  PKGASPYPGLECSGTILSVGKNVSRWKVGDQVCA-------------------------- 87
             G     G E +G ++  G++V   ++GD V                            
Sbjct: 60  QVGLVL--GHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPA 117

Query: 88  ---------LLGG--GGYAEKVAVPAGQV--LPVPSGVS----LKDAAAFPEVACTVWST 130
                     +G   GG AE V VP      L +P        ++D     ++  T +  
Sbjct: 118 RAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHG 177

Query: 131 VFMTSHLSPGESFLVHGGSSG-IGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVC 188
             +T+ + PG +  V G  +G +G  A    +  G   V V   +  +LA  K  G ++ 
Sbjct: 178 A-VTAGVGPGSTVYVAG--AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIA 234

Query: 189 INYKTEDFVARVKEETGGKGVDVILDCMG---------ASYFQRNLGSLN--ID-----G 232
                     ++    G   VD  +D +G          +  +     LN  +      G
Sbjct: 235 DLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAG 294

Query: 233 RLFIIG------------TQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE 280
           ++ I G                    +     +AK  +    G       N+AL+     
Sbjct: 295 KIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFH-TGQTPVMKYNRALM----- 348

Query: 281 KNVWPAIAVGKVKP---VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325
                AI   ++     V  + + L +A   +   ++     K ++ P
Sbjct: 349 ----QAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVPK-KFVIDP 391

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 85.8 bits (213), Expect = 6e-19
 Identities = 72/408 (17%), Positives = 135/408 (33%), Gaps = 102/408 (25%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDD------EVLIKVEATALNRADTLQRKGSYPPP 54
            K++V        V   + V  P+++ +       V++KV +T +  +D    +G +  P
Sbjct: 3   NKSVVYHGTRDLRV---ETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIVP 59

Query: 55  KGASPYPGLECSGTILSVGKNVSRWKVGDQVCA--------------------------- 87
           KG     G E +G ++  G +V    +GD V                             
Sbjct: 60  KGHVL--GHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNP 117

Query: 88  ---------LLGG--GGYAEKVAVPAGQV--LPVPSGVS----LKDAAAFPEVACTVWST 130
                     L G  GG AE V VP      L           +KD     ++  T +  
Sbjct: 118 DADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHG 177

Query: 131 VFMTSHLSPGESFLVHGGSSG-IGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVC 188
                 + PG    + G  +G +G  A    +  G   V V   + E+L +  D G +  
Sbjct: 178 CVSA-GVKPGSHVYIAG--AGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETI 234

Query: 189 INYKTEDFVARVKEETGGKGVDVILDCMG--------ASYFQRNLGSLN--ID-----GR 233
               +     ++ +  G   VD  +D +G         +  +   G+LN   D     G 
Sbjct: 235 DLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGA 294

Query: 234 LFIIGTQGGA------------KTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEK 281
           + I G   G+            +  L+   ++ K + +   G+   +  N+ L       
Sbjct: 295 IGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIM-TGMAPVTNYNRHLT------ 347

Query: 282 NVWPAIAVGKVKP----VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325
               AI   ++      +  + + L +A + +   +      K ++ P
Sbjct: 348 ---EAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSPA-KFVIDP 391

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score = 83.4 bits (207), Expect = 2e-18
 Identities = 56/276 (20%), Positives = 98/276 (35%), Gaps = 51/276 (18%)

Query: 11  SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTIL 70
           +    +L+ VE P +K+ EVL++    ++   D   R  +    K  +   G        
Sbjct: 22  TQSDFELKTVELPPLKNGEVLLEALFLSV---DPYMR-IASKRLKEGAVMMGQ------- 70

Query: 71  SVGK----NVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPV----PSGVSLKDA----- 117
            V +      S +  G  V   L   G+          +  +    P  + L  A     
Sbjct: 71  QVARVVESKNSAFPAGSIV---LAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIG 127

Query: 118 -------AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT 170
                      EV             +  GE+ LV   +  +G+   Q+ K +G +V   
Sbjct: 128 MPGLTAYFGLLEVC-----------GVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGA 176

Query: 171 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 230
           AGS+EK+A  K +G D   NYKT + +    ++    G D   D +G  +    L  +  
Sbjct: 177 AGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKD 236

Query: 231 DGRLFIIG------TQGGAKTELNITSLFAKRLTVQ 260
            G++ I G               +  S+  K+L ++
Sbjct: 237 FGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIE 272

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 76.5 bits (189), Expect = 6e-16
 Identities = 66/302 (21%), Positives = 109/302 (36%), Gaps = 60/302 (19%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           KA+       P  L+  ++   +   ++V I++    +  +D  Q +  +      + YP
Sbjct: 24  KAVGAYSAKQP--LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEW----AGTVYP 77

Query: 62  ---GLECSGTILSVGKNVSRWKVGDQV----------------------CALLGG----- 91
              G E  G +++VG  V ++  GD V                      C  + G     
Sbjct: 78  CVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSP 137

Query: 92  ---------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSP 139
                    GGY++++ V    VL +        A A P + C   T +S         P
Sbjct: 138 TPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVA-P-LLCAGITTYSP-LRHWQAGP 194

Query: 140 GESFLVHG-GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198
           G+   V G G  G+G   I++    G  V     SE K    K LGAD  +N +  D +A
Sbjct: 195 GKKVGVVGIG--GLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMA 252

Query: 199 RVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRL 257
                   K  D IL+ + A +        L  DG + ++G          + +L  KR 
Sbjct: 253 AHL-----KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRR 307

Query: 258 TV 259
            +
Sbjct: 308 AI 309

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score = 75.7 bits (187), Expect = 1e-15
 Identities = 66/275 (24%), Positives = 95/275 (34%), Gaps = 70/275 (25%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA V  + G P  ++  EV  P  K  EV IK+ ATA+   D     G+ P       +
Sbjct: 7   CKAAVAWEAGKPLSIEEIEVAPP--KAHEVRIKIIATAVCHTDAYTLSGADPEG----CF 60

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
           P   G   +G + SVG+ V++ K GD V             C                  
Sbjct: 61  PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120

Query: 88  ------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV-- 127
                              +G   ++E   V    V  +     L          C +  
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLL---GCGIST 177

Query: 128 -WSTVFMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLG 184
            +     T+ L PG    V G G  G+G   I   K  G  R+     +++K A  K+ G
Sbjct: 178 GYGAAVNTAKLEPGSVCAVFGLG--GVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFG 235

Query: 185 ADVCINYKTED--FVARVKEETGGKGVDVILDCMG 217
           A  CIN +         + E T G GVD   +C+G
Sbjct: 236 ATECINPQDFSKPIQEVLIEMTDG-GVDYSFECIG 269

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score = 74.9 bits (185), Expect = 2e-15
 Identities = 51/274 (18%), Positives = 91/274 (33%), Gaps = 34/274 (12%)

Query: 11  SPEVLQLQEVEDPQ---IKDDEVLIKVEATAL---NRA---DTLQRKGSYPPP-KGASPY 60
           +                   + VL+K    +     R           +         P 
Sbjct: 19  TESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDPSTAALAQAYTPGQPI 78

Query: 61  PGLECSGTILSVGK----NVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
            G         V +        +K GD +  ++    Y+    +         + V L  
Sbjct: 79  QGY-------GVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQHTDVPLSY 131

Query: 117 A---AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173
                  P +  T ++  +       GE+  V   S  +G    Q+ K  G  V  +AGS
Sbjct: 132 YTGLLGMPGM--TAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGS 189

Query: 174 EEKLAVCKD-LGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231
           +EK+ + K   G D   NYK E D  A +K      G+D+  + +G       L ++N+ 
Sbjct: 190 KEKVDLLKTKFGFDDAFNYKEESDLTAALKRCF-PNGIDIYFENVGGKMLDAVLVNMNMH 248

Query: 232 GRLFIIGT-----QGGAKTELNITSLFAKRLTVQ 260
           GR+ + G          +   N++++  KR  +Q
Sbjct: 249 GRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQ 282

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score = 75.3 bits (186), Expect = 2e-15
 Identities = 66/279 (23%), Positives = 97/279 (34%), Gaps = 75/279 (26%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA +  + GSP  L ++E+E    K  EV I+V AT +   D                +
Sbjct: 9   CKAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA-----LF 61

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
           P   G EC+G + SVG  V+ +K GD+V             C                  
Sbjct: 62  PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 121

Query: 88  ----------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125
                                  +G   +++   V    +  V    +L+         C
Sbjct: 122 IDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLI---GC 178

Query: 126 TV---WSTVFMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVC 180
                +     T+ ++PG +  V G G   +G  AI   K  G  R+     + EK    
Sbjct: 179 GFSSGYGAAINTAKVTPGSTCAVFGLG--CVGLSAIIGCKIAGASRIIAIDINGEKFPKA 236

Query: 181 KDLGADVCINYKTED--FVARVKEETGGKGVDVILDCMG 217
           K LGA  C+N +  D      + E T G GVD  LDC G
Sbjct: 237 KALGATDCLNPRELDKPVQDVITELTAG-GVDYSLDCAG 274

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score = 74.6 bits (184), Expect = 3e-15
 Identities = 49/277 (17%), Positives = 96/277 (34%), Gaps = 37/277 (13%)

Query: 11  SPEVLQLQEVEDPQ-IKDDEVLIKVEATAL-----NRADTLQRKGSYPPPKGASPYPGLE 64
             E  +++EV  P  I + +V ++    ++      R +         P + +    G  
Sbjct: 25  VAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGG- 83

Query: 65  CSGTILSVGK----NVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
                  +G       +    GD V +      +  KV +    +  V   +     + F
Sbjct: 84  ------GIGIIEESKHTNLTKGDFVTSFYWP--WQTKVILDGNSLEKVDPQLVDGHLSYF 135

Query: 121 PEVA----CTVWSTVFMTSHLSPG--ESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGS 173
                    T    +    H++ G  ++ +V G +   G+ A Q+G   G  RV    G+
Sbjct: 136 LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGT 195

Query: 174 EEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
            EK  +    LG D  INYK ++   +++E     GVDV  D +G +     +  +N + 
Sbjct: 196 HEKCILLTSELGFDAAINYKKDNVAEQLRESC-PAGVDVYFDNVGGNISDTVISQMNENS 254

Query: 233 RLFIIGT---------QGGAKTELNITSLFAKRLTVQ 260
            + + G               +         + +T +
Sbjct: 255 HIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRE 291

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score = 73.8 bits (182), Expect = 6e-15
 Identities = 58/275 (21%), Positives = 98/275 (35%), Gaps = 71/275 (25%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA V+ +   P    ++EVE    K  EV IK+ AT + R+D     G+   P      
Sbjct: 9   CKAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-----L 61

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
           P   G E +G + S+G+ V+  + GD+V             C                  
Sbjct: 62  PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121

Query: 88  ------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV-- 127
                              LG   +++   V    V  + +   L+         C    
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLI---GCGFST 178

Query: 128 -WSTVFMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLG 184
            + +    + ++ G +  V G G  G+G   I   K  G  R+     +++K A  K++G
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLG--GVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236

Query: 185 ADVCINYKTED--FVARVKEETGGKGVDVILDCMG 217
           A  C+N +         + E + G GVD   + +G
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNG-GVDFSFEVIG 270

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 73.4 bits (181), Expect = 8e-15
 Identities = 58/282 (20%), Positives = 92/282 (32%), Gaps = 67/282 (23%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           K   I         +  +     +   +VLI +    +  +D       +        YP
Sbjct: 6   KGFAIFSKDEH--FKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEW----KEGIYP 59

Query: 62  ---GLECSGTILSVGKNVSRWKVGDQV-----------CA-------------------- 87
              G E +G I  VGK V ++K+GD V           C                     
Sbjct: 60  MIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCL 119

Query: 88  --LLGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLS 138
                     GGY+  + V    V+ V     L+  A  P + C   T +S     S ++
Sbjct: 120 DSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVA--P-LLCAGITTYSP-LKFSKVT 175

Query: 139 PGESFLVHG-GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV 197
            G    V G G  G+G+ A++     G  V V A +E K      +G           F 
Sbjct: 176 KGTKVGVAGFG--GLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVK--------HFY 225

Query: 198 ARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIG 238
              K+      +D I+  +   Y  +  L  L  +G L ++G
Sbjct: 226 TDPKQCKE--ELDFIISTIPTHYDLKDYLKLLTYNGDLALVG 265

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 73.0 bits (180), Expect = 1e-14
 Identities = 63/301 (20%), Positives = 111/301 (36%), Gaps = 59/301 (19%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
                  P     L        +   ++V I++    +   D  Q K       G S YP
Sbjct: 11  TGWAARDPSGI--LSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDL----GMSNYP 64

Query: 62  ---GLECSGTILSVGKNVSRWKVGDQV----------------------CALLGG----- 91
              G E  G ++ VG +VS++ VGD V                      C          
Sbjct: 65  MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDV 124

Query: 92  --------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPG 140
                   GG+A+   V    V+ +P G++++ AA  P + C   TV+S +       PG
Sbjct: 125 YINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAA--P-LLCAGVTVYSPLSHFGLKQPG 181

Query: 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-VCKDLGADVCINYKTEDFVAR 199
               +  G  G+G   +++ K  G  V V + S +K     +DLGAD  +    +  ++ 
Sbjct: 182 LRGGI-LGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSE 240

Query: 200 VKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLT 258
           + +      +D ++D +   +  +  L  L +DG+L ++G       +     L   R  
Sbjct: 241 LADS-----LDYVIDTVPVHHALEPYLSLLKLDGKLILMG-VINNPLQFLTPLLMLGRKV 294

Query: 259 V 259
           +
Sbjct: 295 I 295

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score = 72.6 bits (179), Expect = 1e-14
 Identities = 65/274 (23%), Positives = 97/274 (35%), Gaps = 72/274 (26%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           KA V  +P  P  L+   V  P  K  EV IK+ A+ +  +D+   K   P       +P
Sbjct: 11  KAAVAWEPHKPLSLETITVAPP--KAHEVRIKILASGICGSDSSVLKEIIPS-----KFP 63

Query: 62  ---GLECSGTILSVGKNVSRWKVGDQV-------------CA------------------ 87
              G E  G + S+G  V+  K GD+V             C                   
Sbjct: 64  VILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGL 123

Query: 88  -----------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV--- 127
                            L+G   + E   V    V  +     L ++       C     
Sbjct: 124 MADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPL-ESCLI---GCGFATG 179

Query: 128 WSTVFMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGA 185
           +     T+ ++PG +  V G G  G+G  AI   K  G  R+      ++K     +LGA
Sbjct: 180 YGAAVNTAKVTPGSTCAVFGLG--GVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA 237

Query: 186 DVCINYKTED--FVARVKEETGGKGVDVILDCMG 217
             C+N K  D      + E+T G GVD  ++C G
Sbjct: 238 TECLNPKDYDKPIYEVICEKTNG-GVDYAVECAG 270

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 69.5 bits (171), Expect = 1e-13
 Identities = 65/301 (21%), Positives = 102/301 (33%), Gaps = 59/301 (19%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
                        L           +++V  KV    +  +D    K  +    G S YP
Sbjct: 18  FGWAARDQSGH--LSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDW----GFSMYP 71

Query: 62  ---GLECSGTILSVGKNVSRWKVGDQV-----------CA-------------------- 87
              G E  G +  VG  V +  VGD+V           C                     
Sbjct: 72  LVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASI 131

Query: 88  -LLGG---GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPG 140
              G    GGY+  +      ++  P  + L   A  P + C   TV+S +       PG
Sbjct: 132 YHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGA--P-LLCAGITVYSPLKYFGLDEPG 188

Query: 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-VCKDLGADVCINYKTEDFVAR 199
           +   +  G  G+G  A++  K  G +V V + S  K     K+ GAD  +  + ++ +  
Sbjct: 189 KHIGI-VGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQA 247

Query: 200 VKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLT 258
                    +D I+D + A +      G L   G+L ++G       EL   SL A R  
Sbjct: 248 AAGT-----LDGIIDTVSAVHPLLPLFGLLKSHGKLILVG-APEKPLELPAFSLIAGRKI 301

Query: 259 V 259
           V
Sbjct: 302 V 302

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score = 69.6 bits (171), Expect = 2e-13
 Identities = 54/275 (19%), Positives = 88/275 (32%), Gaps = 70/275 (25%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA V  +   P  L ++E+E      +E+ IK+ AT +   D                +
Sbjct: 9   CKAAVAWEANKP--LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD----GF 62

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
           P   G E +G + SVG  V+ ++ G++V             C                  
Sbjct: 63  PVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPD 122

Query: 88  ------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV-- 127
                              LG   +++   V    V  +     L          C V  
Sbjct: 123 VMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLL---GCGVST 179

Query: 128 -WSTVFMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLG 184
            +     T+ + PG +  V G G   +G  A+      G  R+     + +K    K  G
Sbjct: 180 GFGAAVNTAKVEPGSTCAVFGLG--AVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFG 237

Query: 185 ADVCINYKTED--FVARVKEETGGKGVDVILDCMG 217
           A   +N           + + T G GVD  L+C+G
Sbjct: 238 ATDFVNPNDHSEPISQVLSKMTNG-GVDFSLECVG 271

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 66.8 bits (164), Expect = 1e-12
 Identities = 64/308 (20%), Positives = 110/308 (35%), Gaps = 69/308 (22%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           + I I      +  +  + +     D ++ IK+EA  +  +D     G +    G    P
Sbjct: 8   EGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHW----GNMKMP 63

Query: 62  ---GLECSGTILSVGKNV-SRWKVGDQV----------------------CALLGG---- 91
              G E  G ++ +G    S  KVG +V                      C         
Sbjct: 64  LVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQ 123

Query: 92  ---------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSP 139
                    GGYA  V V    V+P+P  +    AA  P + C   TV+S   + +   P
Sbjct: 124 PYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAA--P-LLCGGLTVYSP-LVRNGCGP 179

Query: 140 GESFLVHG-GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198
           G+   + G G  GIG+    + K  G   +V + S  K      +GAD         ++A
Sbjct: 180 GKKVGIVGLG--GIGSMGTLISKAMGAETYVISRSSRKREDAMKMGAD--------HYIA 229

Query: 199 RVKEETGGKGV----DVILDCMGASY---FQRNLGSLNIDGRLFIIGTQGGAKTELNITS 251
            ++E   G+      D+I+ C  +     F     ++ + GR+  I         L++  
Sbjct: 230 TLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSIS-IPEQHEMLSLKP 288

Query: 252 LFAKRLTV 259
              K +++
Sbjct: 289 YGLKAVSI 296

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 9e-05
 Identities = 53/314 (16%), Positives = 98/314 (31%), Gaps = 114/314 (36%)

Query: 15  LQLQEVED---PQIKDDEV-LIKVEATALNRA----DTLQRKGSYPPPKGASPYPGLECS 66
              ++V+D     +  +E+  I +   A++       TL  K      +    +      
Sbjct: 33  FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE----EMVQKF-----V 83

Query: 67  GTILSVGKN----VSRWKVGDQVCALLGGGGYAEKVAVP--AGQVLPVPSGVS------- 113
             +L    N    +S  K   +  +++    Y E+        QV      VS       
Sbjct: 84  EEVLR--INYKFLMSPIKTEQRQPSMMTRM-YIEQRDRLYNDNQVFA-KYNVSRLQPYLK 139

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173
           L+ A                   L P ++ L+ G           +    G         
Sbjct: 140 LRQAL----------------LELRPAKNVLIDG-----------VLGS-G--------- 162

Query: 174 EEK--LAVCKDLGADVCINYKTE---DF------VARVKEETGGKGVDVILDCMGASYFQ 222
             K  +A       DVC++YK +   DF      +            + +L+ +    +Q
Sbjct: 163 --KTWVA------LDVCLSYKVQCKMDFKIFWLNLKNCNSP------ETVLEMLQKLLYQ 208

Query: 223 RNLGSLNIDGRLFIIGTQGGAKTELNITSLFA--KRLTVQAAGLRSRSTENKALIVSEV- 279
                  ID   +   +   +  +L I S+ A  +RL      L+S+  EN  L++  V 
Sbjct: 209 -------IDPN-WTSRSDHSSNIKLRIHSIQAELRRL------LKSKPYENCLLVLLNVQ 254

Query: 280 EKNVWPAIAVG-KV 292
               W A  +  K+
Sbjct: 255 NAKAWNAFNLSCKI 268

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 39.8 bits (94), Expect = 6e-04
 Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 4/85 (4%)

Query: 128 WSTVFMTSHLSPGESFLVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD 186
             +  +        S LV GG+ GIG   A       G +V +T  S E       +  D
Sbjct: 9   HHSSGLVPRSHMSRSVLVTGGNRGIGLAIARAFAD-AGDKVAITYRSGEPPEGFLAVKCD 67

Query: 187 VCINYKTEDFVARVKEETGGKGVDV 211
           +    + E     ++E  G   V+V
Sbjct: 68  ITDTEQVEQAYKEIEETHG--PVEV 90

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 39.5 bits (93), Expect = 9e-04
 Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 15/90 (16%)

Query: 134 TSHLSPGESFLVHGGSSGIGT-FAIQMGKCQGVRVFVTAGSEEKL-AVCKDL-------- 183
            SH+S  ++  V G SSGIG   A  +   +G+ V+  A   + + A    L        
Sbjct: 18  GSHMSRPQTAFVTGVSSGIGLAVARTLAA-RGIAVYGCARDAKNVSAAVDGLRAAGHDVD 76

Query: 184 --GADVCINYKTEDFVARVKEETGGKGVDV 211
               DV    +    VA   E  G   + +
Sbjct: 77  GSSCDVTSTDEVHAAVAAAVERFG--PIGI 104

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	325
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.92
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	99.02
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.88
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.81
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.69
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.59
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.56
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.53
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.4
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.39
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.21
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.2
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.02
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.89
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.89
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.85
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.85
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.82
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.76
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.76
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.75
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.75
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.71
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.7
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.7
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.69
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.67
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.65
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.63
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.63
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.62
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.62
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.62
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.61
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.6
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.6
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.59
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.59
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	97.59
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.59
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.55
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.55
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.54
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.53
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.53
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.52
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.52
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.52
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.5
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.49
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.48
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.47
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.47
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.46
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.46
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.45
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.45
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.44
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.44
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.44
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.43
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.43
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.42
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.42
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.42
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.41
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.4
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.4
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.4
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.4
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.4
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.4
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.39
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.39
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.39
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.38
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.38
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.37
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.37
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.37
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.37
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.37
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.36
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.35
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.35
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.35
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.35
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.35
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.34
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.34
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.33
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.33
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.33
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.33
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.33
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.33
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.33
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.33
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.32
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.32
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.32
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.31
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.31
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.3
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.3
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.3
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.29
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.29
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.29
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.29
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.28
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.28
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.28
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.26
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.26
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.26
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.26
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.25
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.25
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.24
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.24
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.24
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.24
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.23
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.23
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.23
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.23
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.22
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.22
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.22
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.2
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.2
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.19
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.19
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.19
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.19
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.19
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.19
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.19
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.19
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.18
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.18
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.18
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	97.17
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.17
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.17
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.17
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.17
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.16
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.16
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.16
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.15
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	97.15
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.15
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.14
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.14
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.13
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.13
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.13
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.12
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.12
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.12
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.12
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.11
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.11
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.11
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.1
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.1
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.09
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.08
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.08
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.08
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.08
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.08
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.07
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.07
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.07
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.06
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.06
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.06
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.05
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.04
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.04
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.03
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.99
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.98
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.97
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.97
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	96.97
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.96
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	96.96
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.95
1spx_A	278	Short-chain reductase family member (5L265); paral	96.94
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.93
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.93
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.92
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	96.92
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.92
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.92
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	96.91
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	96.91
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.91
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	96.91
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	96.91
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	96.9
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.88
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	96.88
4e4y_A	244	Short chain dehydrogenase family protein; structur	96.87
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.87
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	96.87
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.86
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.86
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.85
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.84
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	96.84
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.83
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	96.83
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	96.83
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	96.83
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	96.83
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.83
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.82
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	96.82
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.82
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	96.81
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.81
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	96.8
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.8
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.8
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	96.8
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	96.79
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	96.79
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	96.79
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.78
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.78
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	96.78
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.78
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	96.78
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.78
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	96.77
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	96.76
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.75
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.74
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.73
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	96.72
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	96.71
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	96.71
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.71
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.7
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	96.7
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.69
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.68
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.68
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	96.68
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	96.67
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	96.67
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.67
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.66
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.65
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.64
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.64
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.64
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.64
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.62
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.62
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.62
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	96.61
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	96.59
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.59
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.59
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.59
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	96.58
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.58
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.57
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	96.56
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.55
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.54
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	96.53
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	96.51
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.51
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.5
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.5
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	96.49
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.48
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.48
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.45
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	96.43
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.43
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.43
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.41
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.41
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.4
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	96.39
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.39
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.37
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.37
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.36
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.36
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.36
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	96.35
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	96.35
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.33
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	96.32
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	96.32
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.32
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	96.3
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	96.29
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	96.28
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	96.28
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	96.27
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	96.26
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.26
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	96.26
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	96.25
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	96.24
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.24
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.23
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.22
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	96.22
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	96.21
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.21
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.21
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	96.21
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	96.2
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.2
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.19
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.18
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.17
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	96.16
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	96.14
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.13
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	96.1
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	96.1
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.06
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.06
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	96.04
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.03
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.03
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.03
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.02
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	96.02
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.02
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.01
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.98
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.98
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	95.97
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.95
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	95.95
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.95
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	95.94
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	95.93
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.92
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	95.92
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	95.92
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	95.91
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.89
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	95.89
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.89
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	95.87
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	95.87
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	95.86
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.86
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	95.85
2b25_A	336	Hypothetical protein; structural genomics, methyl	95.84
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	95.82
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.82
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	95.82
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	95.81
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	95.79
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	95.79
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	95.78
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.77
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.77
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	95.77
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.76
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	95.75
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.75
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	95.73
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	95.73
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.71
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.71
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	95.7
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	95.69
3f4k_A	257	Putative methyltransferase; structural genomics, P	95.68
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.67
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.66
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	95.65
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	95.65
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	95.65
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	95.61
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.59
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	95.59
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	95.55
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	95.54
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	95.53
2yqz_A	263	Hypothetical protein TTHA0223; RNA methyltransfera	95.49
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.49
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	95.46
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	95.45
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	95.45
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	95.45
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	95.44
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	95.42
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	95.42
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.42
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	95.42
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.41
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	95.41
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	95.4
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	95.39
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.39
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	95.38
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	95.37
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	95.37
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	95.35
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	95.34
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	95.33
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.33
4ezb_A	317	Uncharacterized conserved protein; structural geno	95.32
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	95.32
2qrj_A	394	Saccharopine dehydrogenase, NAD+, L-lysine- formin	95.31
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	95.31
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	95.3
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.29
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.27
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	95.26
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	95.26

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=4.1e-58  Score=407.85  Aligned_cols=324  Identities=48%  Similarity=0.810  Sum_probs=299.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++.++.+++++.+.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus        29 MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~  108 (353)
T 4dup_A           29 MRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGPGVSGYA  108 (353)
T ss_dssp             EEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECTTCCSCC
T ss_pred             eeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEECCCCCCCC
Confidence            89999999998888999999999999999999999999999999999998876666789999999999999999999999


Q ss_pred             CCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG  160 (325)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a  160 (325)
                      +||+|+++..+|+|+||++++++.++++|++++++++|+++.+++|||+++.+.+++++|++|||+|++|++|++++|++
T Consensus       109 vGdrV~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a  188 (353)
T 4dup_A          109 VGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLA  188 (353)
T ss_dssp             TTCEEEEECSSCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHH
T ss_pred             CCCEEEEecCCCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence            99999999989999999999999999999999999999999999999999988899999999999988899999999999


Q ss_pred             HHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEecc
Q 020487          161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      +..|++|+++++++++++.++++|++.+++++..++.+.+.+.+ +.++|++|||+|...+..++++++++|+++.+|..
T Consensus       189 ~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~  267 (353)
T 4dup_A          189 RAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAET-GQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFL  267 (353)
T ss_dssp             HHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHH-SSCEEEEEESCCGGGHHHHHHTEEEEEEEEECCCT
T ss_pred             HHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHh-CCCceEEEECCCHHHHHHHHHHhccCCEEEEEEec
Confidence            99999999999999999999999999999999888888898888 66899999999999889999999999999999977


Q ss_pred             CCcccc-cchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCce
Q 020487          241 GGAKTE-LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIG  319 (325)
Q Consensus       241 ~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~g  319 (325)
                      .+.... ++...++.+++++.++.+............++.++++++++.+|+++++++++|+++++++|++.+++++..|
T Consensus       268 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~g  347 (353)
T 4dup_A          268 GGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVG  347 (353)
T ss_dssp             TCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHHTCCSS
T ss_pred             CCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCCcceEEeHHHHHHHHHHHHhCCCCc
Confidence            654433 6777888899999999887765555555666678889999999999999999999999999999999999999


Q ss_pred             eEEEeC
Q 020487          320 KIMLVP  325 (325)
Q Consensus       320 kvvi~~  325 (325)
                      |+|+++
T Consensus       348 Kvvl~~  353 (353)
T 4dup_A          348 KVMLTV  353 (353)
T ss_dssp             EEEEEC
T ss_pred             eEEEeC
Confidence            999874

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=2.6e-57  Score=401.09  Aligned_cols=321  Identities=30%  Similarity=0.466  Sum_probs=284.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++.++.+++++.+.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|++++ |+
T Consensus        22 MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~-~~  100 (342)
T 4eye_A           22 MKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEGSG-IK  100 (342)
T ss_dssp             EEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCTTSS-CC
T ss_pred             eEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECCCCC-CC
Confidence            89999999998888999999999999999999999999999999999998875556799999999999999999999 99


Q ss_pred             CCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG  160 (325)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a  160 (325)
                      +||+|+++..+|+|+||++++++.++++|+++++++|++++.++++||+++.+.+++++|++|||+|++|++|++++|++
T Consensus       101 vGDrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a  180 (342)
T 4eye_A          101 PGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIA  180 (342)
T ss_dssp             TTCEEEEECSSCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHH
T ss_pred             CCCEEEEecCCCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence            99999999888999999999999999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEecc
Q 020487          161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      +..|++|+++++++++++.++++|++.++++. .++.+.+.+.++++++|++|||+|.+.+..++++++++|+++.+|..
T Consensus       181 ~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~  259 (342)
T 4eye_A          181 KGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFA  259 (342)
T ss_dssp             HHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC--CHHHHHHTEEEEEEEEEC---
T ss_pred             HHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceEEEECCchhHHHHHHHhhcCCCEEEEEEcc
Confidence            99999999999999999999999999999988 78888999999888999999999998889999999999999999876


Q ss_pred             CCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCcee
Q 020487          241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGK  320 (325)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gk  320 (325)
                      .+....++...++.+++++.++....... ..+....+.++.+++++.+| ++++++++|+++++++|++.+.+++..||
T Consensus       260 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-~~~~~~~~~~~~~~~l~~~g-l~~~i~~~~~l~~~~~A~~~~~~~~~~gK  337 (342)
T 4eye_A          260 AGGIPTIKVNRLLLRNASLIGVAWGEFLR-THADYLYETQAGLEKLVAEG-MRPPVSARIPLSEGRQALQDFADGKVYGK  337 (342)
T ss_dssp             -------CCCCGGGTTCEEEECCHHHHHH-HCTTHHHHHHHHHHHHHHTT-CCCCEEEEEEGGGHHHHHHHHHTTCCCSE
T ss_pred             CCCCCccCHHHHhhcCCEEEEEehhhhhh-cCHHHHHHHHHHHHHHHHcC-CCCCcceEEeHHHHHHHHHHHHhCCCCce
Confidence            65434455556777999999987654321 11234456677799999999 99999999999999999999999999999


Q ss_pred             EEEeC
Q 020487          321 IMLVP  325 (325)
Q Consensus       321 vvi~~  325 (325)
                      +|++|
T Consensus       338 vvl~P  342 (342)
T 4eye_A          338 MVLVP  342 (342)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            99987

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=1.1e-56  Score=394.61  Aligned_cols=322  Identities=30%  Similarity=0.412  Sum_probs=290.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||++++.+|+++.+++++.+.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~   80 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA-PFLPSGLGAEGAGVVEAVGDEVTRFK   80 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC-CCCCCCCCceeEEEEEEECCCCCCCC
Confidence            79999999999989999999999999999999999999999999999998765 34688999999999999999999999


Q ss_pred             CCCEEEEEc-CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHH
Q 020487           81 VGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM  159 (325)
Q Consensus        81 ~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~  159 (325)
                      +||+|+... .+|+|+||++++++.++++|+++++++|++++..++++|+++.+..++++|++|||+|++|++|++++|+
T Consensus        81 ~GdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~  160 (325)
T 3jyn_A           81 VGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQW  160 (325)
T ss_dssp             TTCEEEESSSSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHH
T ss_pred             CCCEEEEecCCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHH
Confidence            999999875 4799999999999999999999999999999999999999998888999999999999889999999999


Q ss_pred             HHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEec
Q 020487          160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       160 a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ++..|++|+++++++++++.++++|+++++++...++.+.+.+.++++++|++|||+|...+..++++++++|+++.+|.
T Consensus       161 a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~  240 (325)
T 3jyn_A          161 AKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGN  240 (325)
T ss_dssp             HHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCGGGHHHHHTTEEEEEEEEECCC
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhcCCCEEEEEec
Confidence            99999999999999999999999999999999998999999999998899999999999888999999999999999998


Q ss_pred             cCCcccccchHHHHhh-ccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCc
Q 020487          240 QGGAKTELNITSLFAK-RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHI  318 (325)
Q Consensus       240 ~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~  318 (325)
                      ..+....++...+..+ .+.+.+..+..+..  .+..+++.++.+++++.+|++++.++++|+++++++|++.+.+++..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~  318 (325)
T 3jyn_A          241 ASGPVSGVNLGILAQKDSVYVTRPTLGSYAN--NAQNLQTMADELFDMLASGKLKVDGIEQYALKDAAKAQIELSARRTT  318 (325)
T ss_dssp             TTCCCCSCCTHHHHHTTSCEEECCCHHHHSC--STTHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGHHHHHHHHHTTCCC
T ss_pred             CCCCCCCCCHHHHhhcCcEEEEeeeeeeecC--CHHHHHHHHHHHHHHHHCCCeeCccccEEcHHHHHHHHHHHHcCCCC
Confidence            7654445666666666 56666554333221  12345566777999999999999899999999999999999999999


Q ss_pred             eeEEEeC
Q 020487          319 GKIMLVP  325 (325)
Q Consensus       319 gkvvi~~  325 (325)
                      ||+|+.|
T Consensus       319 Gkvvl~p  325 (325)
T 3jyn_A          319 GSTILIP  325 (325)
T ss_dssp             SCEEEEC
T ss_pred             ceEEEeC
Confidence            9999987

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=9.5e-56  Score=392.82  Aligned_cols=325  Identities=41%  Similarity=0.711  Sum_probs=288.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCC-CCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV-SRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~-~~~   79 (325)
                      |||+++..++.++.+++++.+.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++ ++|
T Consensus        23 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~  102 (354)
T 2j8z_A           23 MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHW  102 (354)
T ss_dssp             EEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSCC--CC
T ss_pred             eeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCCcCCCC
Confidence            8999999998887899999999999999999999999999999999999876544568999999999999999999 999


Q ss_pred             CCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHH
Q 020487           80 KVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM  159 (325)
Q Consensus        80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~  159 (325)
                      ++||+|+++..+|+|+||++++++.++++|+++++++||+++.+++|||+++.+.+++++|++|+|+|++|++|++++|+
T Consensus       103 ~vGdrV~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~  182 (354)
T 2j8z_A          103 KIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQL  182 (354)
T ss_dssp             CTTCEEEEECSSCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHH
T ss_pred             CCCCEEEEecCCCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHH
Confidence            99999999988899999999999999999999999999999999999999998888999999999999889999999999


Q ss_pred             HHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEec
Q 020487          160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       160 a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ++..|++|+++++++++.+.++++|++.+++.....+.+.+.+.+++.++|++|||+|...+..++++++++|+++.+|.
T Consensus       183 a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~  262 (354)
T 2j8z_A          183 TRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGL  262 (354)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCGGGHHHHHHHEEEEEEEEECCC
T ss_pred             HHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCchHHHHHHHhccCCCEEEEEec
Confidence            99999999999999999999999999999998888888888888877789999999999888888999999999999997


Q ss_pred             cCCcccccch-HHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCC---ccccccccccchhhHHHHHHHHHhC
Q 020487          240 QGGAKTELNI-TSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG---KVKPVIYKYLPLCEAAEAHQLMESS  315 (325)
Q Consensus       240 ~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~l~~~~~~~~~l~~~~~a~~~~~~~  315 (325)
                      ..+....++. ..++.+++++.++.+............++..+.+++++.+|   +++++++++|+++++++|++.+.++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~  342 (354)
T 2j8z_A          263 MGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEAN  342 (354)
T ss_dssp             TTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTT
T ss_pred             cCCCccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhC
Confidence            6654345666 67788999999987654432222233444556688999999   8999999999999999999999988


Q ss_pred             CCceeEEEeC
Q 020487          316 QHIGKIMLVP  325 (325)
Q Consensus       316 ~~~gkvvi~~  325 (325)
                      +..||+|+++
T Consensus       343 ~~~gKvvv~~  352 (354)
T 2j8z_A          343 KNIGKIVLEL  352 (354)
T ss_dssp             CCSSEEEEEC
T ss_pred             CCCceEEEec
Confidence            8889999875

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=9.4e-56  Score=390.23  Aligned_cols=320  Identities=29%  Similarity=0.416  Sum_probs=291.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..+++++.+++++.+.|+|+++||+|||.++|||++|++.+.|.++.  .+|.++|||++|+|+++|+++++|+
T Consensus         9 mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~P~i~G~e~~G~V~~vG~~v~~~~   86 (334)
T 3qwb_A            9 QKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPC--EKPYVLGREASGTVVAKGKGVTNFE   86 (334)
T ss_dssp             EEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSCC--CSSEECCSEEEEEEEEECTTCCSCC
T ss_pred             eEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCccccceEEEEEEECCCCCCCC
Confidence            89999999998888999999999999999999999999999999999998764  3688999999999999999999999


Q ss_pred             CCCEEEEEcCCceeeeEEeec-CCceeeCCCCCCHHh---hccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHH
Q 020487           81 VGDQVCALLGGGGYAEKVAVP-AGQVLPVPSGVSLKD---AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFA  156 (325)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~-~~~~~~~p~~~~~~~---aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~  156 (325)
                      +||+|+.+. +|+|++|++++ ++.++++|+++++++   +++++..+++||+++.+..++++|++|||+|++|++|+++
T Consensus        87 ~GdrV~~~~-~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~  165 (334)
T 3qwb_A           87 VGDQVAYIS-NSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLIL  165 (334)
T ss_dssp             TTCEEEEEC-SSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHH
T ss_pred             CCCEEEEee-CCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHH
Confidence            999999885 69999999999 999999999999999   8889999999999998888999999999999889999999


Q ss_pred             HHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEE
Q 020487          157 IQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI  236 (325)
Q Consensus       157 ~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~  236 (325)
                      +|+++..|++|+++++++++++.++++|++.+++++..++.+.+.+.+++.++|++|||+|...+..++++++++|+++.
T Consensus       166 ~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~  245 (334)
T 3qwb_A          166 NQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVS  245 (334)
T ss_dssp             HHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGGGGHHHHHHHEEEEEEEEE
T ss_pred             HHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhccCCEEEE
Confidence            99999999999999999999999999999999999998999999999988899999999999888999999999999999


Q ss_pred             EeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCC
Q 020487          237 IGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQ  316 (325)
Q Consensus       237 ~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~  316 (325)
                      +|...+....++...+..+++++.++.+..+..  ....+.+.++.+++++.+|++++.++++|+++++++|++.+++++
T Consensus       246 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~  323 (334)
T 3qwb_A          246 FGNASGLIPPFSITRLSPKNITLVRPQLYGYIA--DPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRK  323 (334)
T ss_dssp             CCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSC--SHHHHHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTC
T ss_pred             EcCCCCCCCCcchhhhhhCceEEEEEEeccccC--CHHHHHHHHHHHHHHHHCCCccCceeeEEcHHHHHHHHHHHHhCC
Confidence            998765544567777778999999876654432  123455667779999999999999999999999999999999999


Q ss_pred             CceeEEEeC
Q 020487          317 HIGKIMLVP  325 (325)
Q Consensus       317 ~~gkvvi~~  325 (325)
                      ..||+|++|
T Consensus       324 ~~gKvvi~~  332 (334)
T 3qwb_A          324 TVGKLVLEI  332 (334)
T ss_dssp             CCBEEEEEC
T ss_pred             CceEEEEec
Confidence            999999975

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=1.4e-55  Score=392.98  Aligned_cols=312  Identities=28%  Similarity=0.432  Sum_probs=283.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..+ .++.+++++.|.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus        28 mkA~~~~~~-~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~  106 (363)
T 3uog_A           28 MQEWSTETV-APHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTRFR  106 (363)
T ss_dssp             EEEEEBSCT-TTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             hEEEEEccC-CCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCCCCCC
Confidence            799999987 4466999999999999999999999999999999999998775556799999999999999999999999


Q ss_pred             CCCEEEEEc------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcC
Q 020487           81 VGDQVCALL------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH  136 (325)
Q Consensus        81 ~Gd~V~~~~------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~  136 (325)
                      +||+|++..                        .+|+|+||++++++.++++|+++++++||+++++++|||+++.+.++
T Consensus       107 vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~  186 (363)
T 3uog_A          107 PGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGH  186 (363)
T ss_dssp             TTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHHHHHHTTTTC
T ss_pred             CCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHHHHHHHHHhcC
Confidence            999999861                        25899999999999999999999999999999999999999988899


Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      +++|++|||+| +|++|++++|+|+..|++|+++++++++++.++++|++++++....++.+.+.+.++++++|++|||+
T Consensus       187 ~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~  265 (363)
T 3uog_A          187 LRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIA  265 (363)
T ss_dssp             CCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEET
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECC
Confidence            99999999999 59999999999999999999999999999999999999999966678888999999988999999999


Q ss_pred             ChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccccc
Q 020487          217 GASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVI  296 (325)
Q Consensus       217 g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~  296 (325)
                      |...+..++++++++|+++.+|........++...++.+++++.++....          .+.++++++++.+|++++++
T Consensus       266 g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~----------~~~~~~~~~l~~~g~l~~~i  335 (363)
T 3uog_A          266 GGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGH----------RRALEDLVGAVDRLGLKPVI  335 (363)
T ss_dssp             TSSCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCC----------HHHHHHHHHHHHHHTCCCCE
T ss_pred             ChHHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCC----------HHHHHHHHHHHHcCCCccce
Confidence            98888999999999999999998776545677778888999999987643          13445588999999999999


Q ss_pred             ccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          297 YKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       297 ~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++|+++++++|++.+++++ .||+|+++
T Consensus       336 ~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          336 DMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             EEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             eeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence            99999999999999999988 89999874

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=2.1e-55  Score=388.84  Aligned_cols=323  Identities=24%  Similarity=0.339  Sum_probs=283.8

Q ss_pred             CEEEEEcCCCCC-cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~-~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      |||+++..+|++ +.+++++.|.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|
T Consensus         5 mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~~~   84 (340)
T 3gms_A            5 GKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVSRE   84 (340)
T ss_dssp             EEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTSCGG
T ss_pred             cEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCCCCC
Confidence            799999999987 6799999999999999999999999999999999999887655679999999999999999999999


Q ss_pred             CCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHH
Q 020487           80 KVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM  159 (325)
Q Consensus        80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~  159 (325)
                      ++||+|+++..+|+|+||++++++.++++|+++++++||+++...++||+++.+.+++++|++|||+|++|++|++++|+
T Consensus        85 ~vGdrV~~~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~  164 (340)
T 3gms_A           85 LIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQL  164 (340)
T ss_dssp             GTTCEEEECSSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHH
T ss_pred             CCCCEEEecCCCccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHH
Confidence            99999999988899999999999999999999999999999999999999998899999999999999988999999999


Q ss_pred             HHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEec
Q 020487          160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       160 a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ++..|++|+++++++++++.++++|+++++++...++.+.+.+.+++.++|++|||+|...+...+++++++|+++.+|.
T Consensus       165 a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~  244 (340)
T 3gms_A          165 SQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGL  244 (340)
T ss_dssp             HHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCHHHHHHHHHTEEEEEEEEECCC
T ss_pred             HHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCChhHHHHHHHhcCCCEEEEEee
Confidence            99999999999999999999999999999999988889999999988899999999999888778899999999999997


Q ss_pred             cCCcccccchHHHHh-hccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccc-ccccccchhhHHHHHHHHHhCCC
Q 020487          240 QGGAKTELNITSLFA-KRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP-VIYKYLPLCEAAEAHQLMESSQH  317 (325)
Q Consensus       240 ~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~-~~~~~~~l~~~~~a~~~~~~~~~  317 (325)
                      ....  ..+...+.. .++.+..+.+.............+.++++++++.+|++++ .++++|+++++++|++.+++++.
T Consensus       245 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~i~~~~~l~~~~~A~~~~~~~~~  322 (340)
T 3gms_A          245 LSGI--QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHSTYELADVKAAVDVVQSAEK  322 (340)
T ss_dssp             TTSC--CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEEGGGHHHHHHHHHCTTC
T ss_pred             cCCC--CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCccccccEEEeHHHHHHHHHHHHhcCC
Confidence            6543  344444432 3444444433222111112234567778999999999987 57899999999999999999884


Q ss_pred             -ceeEEEeC
Q 020487          318 -IGKIMLVP  325 (325)
Q Consensus       318 -~gkvvi~~  325 (325)
                       .||+++.+
T Consensus       323 ~~GKvvl~~  331 (340)
T 3gms_A          323 TKGKVFLTS  331 (340)
T ss_dssp             CSSEEEEEC
T ss_pred             CCCeEEEEE
Confidence             59999975

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.1e-54  Score=385.51  Aligned_cols=321  Identities=29%  Similarity=0.439  Sum_probs=274.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..+++++.+++++.+.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus         4 mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~   83 (349)
T 4a27_A            4 MRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYE   83 (349)
T ss_dssp             EEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCSCC
T ss_pred             eEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCCCC
Confidence            89999999998888999999999999999999999999999999999998776667799999999999999999999999


Q ss_pred             CCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG  160 (325)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a  160 (325)
                      +||+|+++..+|+|+||++++++.++++|++++++++++++++++|||+++.+.+++++|++|||+|++|++|++++|+|
T Consensus        84 ~GdrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla  163 (349)
T 4a27_A           84 IGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLC  163 (349)
T ss_dssp             TTCEEEEECSSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHH
T ss_pred             CCCEEEEecCCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHH
Confidence            99999999988999999999999999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHCC-CEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEec
Q 020487          161 KCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       161 ~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      +..| ++|++++ ++++.+.++ +|++++++ ...++.+.+.+.++ +++|++|||+|++.+..++++++++|+++.+|.
T Consensus       164 ~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~-~~~~~~~~~~~~~~-~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~G~  239 (349)
T 4a27_A          164 STVPNVTVFGTA-STFKHEAIK-DSVTHLFD-RNADYVQEVKRISA-EGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGS  239 (349)
T ss_dssp             TTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE-TTSCHHHHHHHHCT-TCEEEEEEECC-------CTTEEEEEEEEEEC-
T ss_pred             HHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc-CCccHHHHHHHhcC-CCceEEEECCCchhHHHHHHHhhcCCEEEEECC
Confidence            9995 5888887 667888887 99999999 77778888888765 589999999999888889999999999999987


Q ss_pred             cCCcc----------------cccchHHHHhhccEeeecccccccch-hHHHHHHHHHHHHHHHHHCCccccccccccch
Q 020487          240 QGGAK----------------TELNITSLFAKRLTVQAAGLRSRSTE-NKALIVSEVEKNVWPAIAVGKVKPVIYKYLPL  302 (325)
Q Consensus       240 ~~~~~----------------~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l  302 (325)
                      .....                ...+...++.+++++.++.+...... .......+.++.+++++.+|++++.++++|++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l  319 (349)
T 4a27_A          240 SNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWAL  319 (349)
T ss_dssp             ------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCCCCEEEEECG
T ss_pred             CcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCccccccceECH
Confidence            54211                12455667778999988865432211 11123466777899999999999999999999


Q ss_pred             hhHHHHHHHHHhCCCceeEEEeC
Q 020487          303 CEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       303 ~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++++|++.+++++..||+|++|
T Consensus       320 ~~~~~A~~~l~~~~~~GKvvi~~  342 (349)
T 4a27_A          320 EEVKEAMQRIHDRGNIGKLILDV  342 (349)
T ss_dssp             GGHHHHHHHHHTTCCSSEEEEET
T ss_pred             HHHHHHHHHHHhCCCCceEEEec
Confidence            99999999999999999999975

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.2e-54  Score=381.43  Aligned_cols=319  Identities=31%  Similarity=0.504  Sum_probs=283.7

Q ss_pred             CEEEEEcCCCCCcceEE-EeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~-~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      |||+++..++.++.+++ ++.+.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|++++.|
T Consensus        30 Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~  109 (351)
T 1yb5_A           30 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAF  109 (351)
T ss_dssp             EEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTTC
T ss_pred             EEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCCCCCC
Confidence            79999999888888999 89999999999999999999999999999999775444568999999999999999999999


Q ss_pred             CCCCEEEEEcC-CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHH
Q 020487           80 KVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQ  158 (325)
Q Consensus        80 ~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~  158 (325)
                      ++||+|++... +|+|+||++++++.++++|+++++++||+++++++|||+++.+..++++|++++|+|++|++|++++|
T Consensus       110 ~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~  189 (351)
T 1yb5_A          110 KKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQ  189 (351)
T ss_dssp             CTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHH
T ss_pred             CCCCEEEEeCCCCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHH
Confidence            99999998754 69999999999999999999999999999999999999999878899999999999999999999999


Q ss_pred             HHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEe
Q 020487          159 MGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       159 ~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g  238 (325)
                      +++..|++|+++++++++.+.++++|++.+++.....+.+.+.+.++++++|++|||+|...+..++++++++|+++.+|
T Consensus       190 ~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~~~~~~~~~~l~~~G~iv~~g  269 (351)
T 1yb5_A          190 IARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG  269 (351)
T ss_dssp             HHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECC
T ss_pred             HHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCChHHHHHHHHhccCCCEEEEEe
Confidence            99999999999999999999999999999999888888888888888778999999999988888899999999999998


Q ss_pred             ccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHH-HHhCCC
Q 020487          239 TQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL-MESSQH  317 (325)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~-~~~~~~  317 (325)
                      ...  ...++...++.+++++.++.+....    ...+.+.++.+.+++.+|+++++++++|+++++++|++. +++++.
T Consensus       270 ~~~--~~~~~~~~~~~~~~~i~g~~~~~~~----~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~  343 (351)
T 1yb5_A          270 SRG--TIEINPRDTMAKESSIIGVTLFSST----KEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGA  343 (351)
T ss_dssp             CCS--CEEECTHHHHTTTCEEEECCGGGCC----HHHHHHHHHHHHHHHHHTCCCCCEEEEEEGGGHHHHHHHHHHSSCC
T ss_pred             cCC--CCccCHHHHHhCCcEEEEEEeecCC----HHHHHHHHHHHHHHHHCCCccCccceEEcHHHHHHHHHHHHHhCCC
Confidence            642  2345666777899999998653322    223456666788889999999999999999999999998 566677


Q ss_pred             ceeEEEeC
Q 020487          318 IGKIMLVP  325 (325)
Q Consensus       318 ~gkvvi~~  325 (325)
                      .||+|+++
T Consensus       344 ~gKvvi~~  351 (351)
T 1yb5_A          344 TGKMILLL  351 (351)
T ss_dssp             SSEEEEEC
T ss_pred             CeEEEEeC
Confidence            89999975

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=1.4e-54  Score=382.64  Aligned_cols=322  Identities=30%  Similarity=0.462  Sum_probs=280.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCC-CCC-CCCCCCCCCceeEEEEEecCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY-PPP-KGASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~-~~~-~~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      |||+++..++.++.+++++.|.|+|+++||+|||.++|||++|++.+.|.+ +.. ..+|.++|||++|+|+++|+++++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            899999999888889999999999999999999999999999999998866 221 346889999999999999999999


Q ss_pred             CCCCCEEEEEcC-CceeeeEEeecCCceeeCCCCCCHHh--hccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHH
Q 020487           79 WKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKD--AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF  155 (325)
Q Consensus        79 ~~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~--aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~  155 (325)
                      |++||+|+.... +|+|+||++++++.++++|+++++++  +++++.+++|||+++.+..++++|++++|+|++|++|++
T Consensus        82 ~~~GdrV~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~  161 (333)
T 1wly_A           82 FTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHI  161 (333)
T ss_dssp             CCTTCEEEECSSSCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHH
T ss_pred             CCCCCEEEEecCCCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHH
Confidence            999999987654 79999999999999999999999999  899999999999999878899999999999999999999


Q ss_pred             HHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEE
Q 020487          156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF  235 (325)
Q Consensus       156 ~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v  235 (325)
                      ++++++..|++|+++++++++.+.++++|++.+++.+...+.+.+.+.+++.++|++|||+|...+..++++++++|+++
T Consensus       162 ~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv  241 (333)
T 1wly_A          162 MVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCA  241 (333)
T ss_dssp             HHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCTTTHHHHHHTEEEEEEEE
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcHHHHHHHHHhhccCCEEE
Confidence            99999999999999999999999999999999999888888888888887778999999999988889999999999999


Q ss_pred             EEeccCCcccccchH-HHHhhc--cEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHH
Q 020487          236 IIGTQGGAKTELNIT-SLFAKR--LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLM  312 (325)
Q Consensus       236 ~~g~~~~~~~~~~~~-~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~  312 (325)
                      .+|...+....++.. .++.++  +++.|+..... .  .+....+.++++++++.+|++++.++++|+++++++|++.+
T Consensus       242 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~-~--~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~  318 (333)
T 1wly_A          242 AYGHASGVADPIRVVEDLGVRGSLFITRPALWHYM-S--NRSEIDEGSKCLFDAVKAGVLHSSVAKTFPLREAAAAHKYM  318 (333)
T ss_dssp             ECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGS-C--SHHHHHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHH
T ss_pred             EEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhc-c--CHHHHHHHHHHHHHHHHCCCcCCCcceEEeHHHHHHHHHHH
Confidence            998765433455665 666788  88888754221 1  12234566777999999999999999999999999999999


Q ss_pred             HhCCCceeEEEeC
Q 020487          313 ESSQHIGKIMLVP  325 (325)
Q Consensus       313 ~~~~~~gkvvi~~  325 (325)
                      .+++..||+|++|
T Consensus       319 ~~~~~~gKvvi~~  331 (333)
T 1wly_A          319 GGRQTIGSIVLLP  331 (333)
T ss_dssp             HHCSCCSEEEEET
T ss_pred             HcCCCceEEEEEe
Confidence            9988889999875

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=2.4e-54  Score=382.55  Aligned_cols=315  Identities=35%  Similarity=0.555  Sum_probs=279.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++.++.+++++.+.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA   80 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence            99999999988777999999999999999999999999999999999997764345688999999999999999999999


Q ss_pred             CCCEEE-------E--------------------EcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487           81 VGDQVC-------A--------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (325)
Q Consensus        81 ~Gd~V~-------~--------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~  133 (325)
                      +||+|+       +                    +..+|+|+||++++++.++++|+++++++|++++.++.|||+++.+
T Consensus        81 vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al~~  160 (343)
T 2eih_A           81 PGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVD  160 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHHTT
T ss_pred             CCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHHHH
Confidence            999998       3                    2235999999999999999999999999999999999999999966


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                      .+++++|+++||+|++|++|++++|+++..|++|+++++++++.+.++++|++.+++....++.+.+.+.+++.++|++|
T Consensus       161 ~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi  240 (343)
T 2eih_A          161 KLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVV  240 (343)
T ss_dssp             TSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred             hcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEE
Confidence            67899999999999999999999999999999999999999999999999999999888777778888888767899999


Q ss_pred             eCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccc
Q 020487          214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK  293 (325)
Q Consensus       214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  293 (325)
                      ||+|...+..++++++++|+++.+|........++...++.+++++.++.....          +.++++++++.+|+++
T Consensus       241 ~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----------~~~~~~~~l~~~g~l~  310 (343)
T 2eih_A          241 DHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASK----------SRLFPILRFVEEGKLK  310 (343)
T ss_dssp             ESSCSSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCG----------GGHHHHHHHHHHTSSC
T ss_pred             ECCCHHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccH----------HHHHHHHHHHHcCCCC
Confidence            999977788899999999999999876654334666777889999998753221          2234488999999999


Q ss_pred             cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          294 PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       294 ~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +.++++|+|+++++|++.+++++..||+|++|
T Consensus       311 ~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          311 PVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             CCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             CceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence            98999999999999999999888889999976

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.5e-54  Score=376.47  Aligned_cols=321  Identities=32%  Similarity=0.468  Sum_probs=282.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++.++.+++++.+.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP-PSLPSGLGTEAAGIVSKVGSGVKHIK   80 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCCCCceeEEEEEEECCCCCCCC
Confidence            89999999888888999999999999999999999999999999999987642 34688999999999999999999999


Q ss_pred             CCCEEEEEc--CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHH
Q 020487           81 VGDQVCALL--GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQ  158 (325)
Q Consensus        81 ~Gd~V~~~~--~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~  158 (325)
                      +||+| +++  .+|+|+||++++++.++++|+++++++|++++.+++|||+++.+..++++|++++|+|++|++|++++|
T Consensus        81 ~GdrV-~~~g~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~  159 (327)
T 1qor_A           81 AGDRV-VYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQ  159 (327)
T ss_dssp             TTCEE-EESCCSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHH
T ss_pred             CCCEE-EECCCCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHH
Confidence            99999 554  459999999999999999999999999999999999999999778899999999999998999999999


Q ss_pred             HHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEe
Q 020487          159 MGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       159 ~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g  238 (325)
                      +++..|++|+++++++++.+.++++|++.+++..+.++.+.+.+.+++.++|++|||+|...+..++++++++|+++.+|
T Consensus       160 ~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~iv~~g  239 (327)
T 1qor_A          160 WAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFG  239 (327)
T ss_dssp             HHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECC
T ss_pred             HHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhcCCCEEEEEe
Confidence            99999999999999999999999999999999888888888888887778999999999888899999999999999999


Q ss_pred             ccCCcccccchHHHHhh-ccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccc--cccchhhHHHHHHHHHhC
Q 020487          239 TQGGAKTELNITSLFAK-RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIY--KYLPLCEAAEAHQLMESS  315 (325)
Q Consensus       239 ~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~--~~~~l~~~~~a~~~~~~~  315 (325)
                      ...+....++...++.+ ++++.+.....+..  ......+.++++++++.+|++++.++  ++|+++++++|++.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~l~~~~~A~~~~~~~  317 (327)
T 1qor_A          240 NSSGAVTGVNLGILNQKGSLYVTRPSLQGYIT--TREELTEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESR  317 (327)
T ss_dssp             CTTCCCCCBCTHHHHHTTSCEEECCCHHHHCC--SHHHHHHHHHHHHHHHHTTSSCCCCCGGGEEEGGGHHHHHHHHHTT
T ss_pred             cCCCCCCccCHHHHhhccceEEEccchhhhcC--CHHHHHHHHHHHHHHHHCCCcccccccCcEEcHHHHHHHHHHHHhC
Confidence            76554345666667777 77776543322111  11223556777999999999999888  999999999999999998


Q ss_pred             CCceeEEEeC
Q 020487          316 QHIGKIMLVP  325 (325)
Q Consensus       316 ~~~gkvvi~~  325 (325)
                      +..||+|++|
T Consensus       318 ~~~gKvvl~~  327 (327)
T 1qor_A          318 ATQGSSLLIP  327 (327)
T ss_dssp             CCCBCCEEEC
T ss_pred             CCCceEEEeC
Confidence            8889999976

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=3e-55  Score=389.18  Aligned_cols=321  Identities=23%  Similarity=0.293  Sum_probs=278.2

Q ss_pred             CEEEEEc--CC-CCCcceEEEee---------cCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEE
Q 020487            1 MKAIVIT--QP-GSPEVLQLQEV---------EDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGT   68 (325)
Q Consensus         1 m~a~~~~--~~-~~~~~l~~~~~---------~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~   68 (325)
                      |||+++.  ++ +.++.+++++.         +.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+
T Consensus        11 mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~   90 (349)
T 3pi7_A           11 MKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVGT   90 (349)
T ss_dssp             EEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTSBCCSEEEEE
T ss_pred             heEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCCCccceEEEE
Confidence            7999999  44 34455777787         999999999999999999999999999998776566799999999999


Q ss_pred             EEEecCCC-CCCCCCCEEEEEc---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCC-CEE
Q 020487           69 ILSVGKNV-SRWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPG-ESF  143 (325)
Q Consensus        69 V~~vG~~~-~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~-~~v  143 (325)
                      |+++|+++ ++|++||+|++..   .+|+|+||++++++.++++|+++++++||+++...+|||.++ +.++ +++ +++
T Consensus        91 V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~~v  168 (349)
T 3pi7_A           91 IVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMF-DIVK-QEGEKAF  168 (349)
T ss_dssp             EEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHH-HHHH-HHCCSEE
T ss_pred             EEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHH-HHHh-hCCCCEE
Confidence            99999999 9999999999886   579999999999999999999999999999999999999665 5555 666 799


Q ss_pred             EEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHH
Q 020487          144 LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQR  223 (325)
Q Consensus       144 li~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~  223 (325)
                      +|+|++|++|++++|+|+..|++|+++++++++++.++++|++++++++..++.+.+.+.++++++|++|||+|...+..
T Consensus       169 li~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~~~~~~  248 (349)
T 3pi7_A          169 VMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGPLASA  248 (349)
T ss_dssp             EESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCHHHHHH
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCChhHHH
Confidence            99988999999999999999999999999999999999999999999998889999999887778999999999998888


Q ss_pred             hhccccCCCEEEEEeccCCcccccch-HHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccch
Q 020487          224 NLGSLNIDGRLFIIGTQGGAKTELNI-TSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPL  302 (325)
Q Consensus       224 ~~~~l~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l  302 (325)
                      ++++++++|+++.+|........++. ..++.+++++.++....+.... +....+.++++++++.+|+++++++++|++
T Consensus       249 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l  327 (349)
T 3pi7_A          249 IFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQF-KERRGPAILEAQKRFSDGRWSTDVTAVVPL  327 (349)
T ss_dssp             HHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCHHHHHHHT-HHHHHHHHHHC-CTTTTSSCCC-CCEEEEH
T ss_pred             HHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEehhhhhhC-cHHHHHHHHHHHHHHHcCCcccccceEEcH
Confidence            99999999999999976655555666 7788899999998765443222 234566777789999999999999999999


Q ss_pred             hhHHHHHHHHHhCCCceeEEEeC
Q 020487          303 CEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       303 ~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++++|++.+ +++..||+|++|
T Consensus       328 ~~~~~A~~~~-~~~~~gKvvl~p  349 (349)
T 3pi7_A          328 AEAIAWVPAE-LTKPNGKVFIRP  349 (349)
T ss_dssp             HHHHHHHHHH-HTSSSSCEEEEC
T ss_pred             HHHHHHHHHH-hCCCCceEEEeC
Confidence            9999999954 455679999987

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=7.9e-54  Score=378.90  Aligned_cols=316  Identities=25%  Similarity=0.410  Sum_probs=278.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCC-CCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP-KGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      |||+++..++++  +++++.|.|+|+++||+|||.++|||++|++.+.|..+.. ..+|.++|||++|+|+++|+++++|
T Consensus         8 mka~~~~~~~~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~   85 (343)
T 3gaz_A            8 MIAAVVEEANGP--FVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVDSF   85 (343)
T ss_dssp             EEEEEECSTTCC--EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred             heEEEEecCCCc--eEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCCCC
Confidence            799999998876  9999999999999999999999999999999999875432 4568999999999999999999999


Q ss_pred             CCCCEEEEEc-----CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHH
Q 020487           80 KVGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGT  154 (325)
Q Consensus        80 ~~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~  154 (325)
                      ++||+|+++.     .+|+|+||++++++.++++|+++++++|++++.+++|||+++.+.+++++|++|||+|++|++|+
T Consensus        86 ~vGdrV~~~~~g~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~  165 (343)
T 3gaz_A           86 RVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGH  165 (343)
T ss_dssp             CTTCEEEEECCSSTTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHH
T ss_pred             CCCCEEEEEeCCCCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHH
Confidence            9999999886     36999999999999999999999999999999999999999988899999999999998899999


Q ss_pred             HHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEE
Q 020487          155 FAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL  234 (325)
Q Consensus       155 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~  234 (325)
                      +++|+++..|++|+++ .++++++.++++|++. ++ ...++.+.+.+.+++.++|++|||+|++.+..++++++++|++
T Consensus       166 ~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~-i~-~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~i  242 (343)
T 3gaz_A          166 VAIQIALARGARVFAT-ARGSDLEYVRDLGATP-ID-ASREPEDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHV  242 (343)
T ss_dssp             HHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEE-EE-TTSCHHHHHHHHHTTSCEEEEEESSCTHHHHHHHHHEEEEEEE
T ss_pred             HHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCE-ec-cCCCHHHHHHHHhcCCCceEEEECCCcHHHHHHHHHHhcCCeE
Confidence            9999999999999999 7999999999999988 77 6777788888999888999999999998889999999999999


Q ss_pred             EEEeccCCcccccchHHHHhhccEeeecccccc-cchhHHHHHHHHHHHHHHHHHCCccccccc-cccchhhHHHHHHHH
Q 020487          235 FIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR-STENKALIVSEVEKNVWPAIAVGKVKPVIY-KYLPLCEAAEAHQLM  312 (325)
Q Consensus       235 v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~-~~~~l~~~~~a~~~~  312 (325)
                      +.+|...    ..+...+..+++++.++..... ..........+.++.+++++.+|++++.++ ++|+++++++|++.+
T Consensus       243 v~~g~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~l~~~~~A~~~~  318 (343)
T 3gaz_A          243 VSCLGWG----THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPRLDPRTFSIAEIGSAYDAV  318 (343)
T ss_dssp             EESCCCS----CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCCCBCSCCEETTCHHHHHHHH
T ss_pred             EEEcccC----ccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCcccCccCcEecHHHHHHHHHHH
Confidence            9998654    3455677789999998754321 111122344567778999999999999888 799999999999999


Q ss_pred             HhCCC----ceeEEEeC
Q 020487          313 ESSQH----IGKIMLVP  325 (325)
Q Consensus       313 ~~~~~----~gkvvi~~  325 (325)
                      .+++.    .||+|+++
T Consensus       319 ~~~~~~Gr~~GK~v~~~  335 (343)
T 3gaz_A          319 LGRNDVPRQRGKIAITV  335 (343)
T ss_dssp             HTCTTCCCCSSBCEEEC
T ss_pred             HcCCCcccccceEEEEe
Confidence            98876    57888875

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=1.6e-53  Score=377.49  Aligned_cols=317  Identities=25%  Similarity=0.366  Sum_probs=277.4

Q ss_pred             CEEEEEcCCC---CCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCC
Q 020487            1 MKAIVITQPG---SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS   77 (325)
Q Consensus         1 m~a~~~~~~~---~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~   77 (325)
                      |||+++..+|   .++.+++++.|.|+|+++||+|||.+++||++|++.+.|..   ..+|.++|||++|+|+++|++++
T Consensus         3 MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~---~~~p~i~G~e~~G~V~~vG~~v~   79 (346)
T 3fbg_A            3 LKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDV---SKAPRVLGFDAIGVVESVGNEVT   79 (346)
T ss_dssp             EEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSCC---SSSCBCCCCCEEEEEEEECTTCC
T ss_pred             cEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCCC---CCCCcCcCCccEEEEEEeCCCCC
Confidence            7999999988   56779999999999999999999999999999999998872   34688999999999999999999


Q ss_pred             CCCCCCEEEEEc---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCC------CCCEEEEEcC
Q 020487           78 RWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS------PGESFLVHGG  148 (325)
Q Consensus        78 ~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~------~~~~vli~g~  148 (325)
                      +|++||+|+++.   .+|+|+||++++++.++++|+++++++|++++.+++|||+++.+..+++      +|++|||+|+
T Consensus        80 ~~~~GdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg  159 (346)
T 3fbg_A           80 MFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIING  159 (346)
T ss_dssp             SCCTTCEEEECCCTTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEEST
T ss_pred             cCCCCCEEEEcCCCCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcC
Confidence            999999999864   3699999999999999999999999999999999999999998888998      9999999988


Q ss_pred             CchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH-HHHhhcc
Q 020487          149 SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGS  227 (325)
Q Consensus       149 ~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~  227 (325)
                      +|++|++++|+++..|++|+++++++++++.++++|+++++++.. ++.+.+.+. +++++|++|||+|... +..++++
T Consensus       160 ~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~-~~~g~Dvv~d~~g~~~~~~~~~~~  237 (346)
T 3fbg_A          160 AGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKE-SLLNQFKTQ-GIELVDYVFCTFNTDMYYDDMIQL  237 (346)
T ss_dssp             TSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTS-CHHHHHHHH-TCCCEEEEEESSCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCc-cHHHHHHHh-CCCCccEEEECCCchHHHHHHHHH
Confidence            899999999999999999999999999999999999999998875 567777777 6678999999999865 5888999


Q ss_pred             ccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccc--hhHHHHHHHHHHHHHHHHHCCcccccccccc---ch
Q 020487          228 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRST--ENKALIVSEVEKNVWPAIAVGKVKPVIYKYL---PL  302 (325)
Q Consensus       228 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~---~l  302 (325)
                      ++++|+++.++...   ..++...+..+++++.+..+.....  ........+.++++++++.+|++++.++++|   ++
T Consensus       238 l~~~G~iv~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l  314 (346)
T 3fbg_A          238 VKPRGHIATIVAFE---NDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTTTKVIEGLTT  314 (346)
T ss_dssp             EEEEEEEEESSCCS---SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCCCEEEEEESCCH
T ss_pred             hccCCEEEEECCCC---CCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEECCccceecCCCH
Confidence            99999999887432   3455666677889988875543211  1122334567778999999999999887777   99


Q ss_pred             hhHHHHHHHHHhCCCceeEEEeC
Q 020487          303 CEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       303 ~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++++|++.+.+++..||+|+++
T Consensus       315 ~~~~~A~~~~~~g~~~GKvvl~~  337 (346)
T 3fbg_A          315 ENIYQAHQILESNTMIGKLVINL  337 (346)
T ss_dssp             HHHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHhcCCcceEEEEec
Confidence            99999999999999999999975

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=4.1e-54  Score=382.90  Aligned_cols=324  Identities=22%  Similarity=0.301  Sum_probs=274.2

Q ss_pred             CEEEEEcCCCCC-cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~-~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      |||+++..++.+ +.+++++.+.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|++++.|
T Consensus        27 mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~  106 (357)
T 1zsy_A           27 VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGL  106 (357)
T ss_dssp             EEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECTTCCSC
T ss_pred             hEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCCCCCCC
Confidence            799999998875 4588999999999999999999999999999999999776544568899999999999999999999


Q ss_pred             CCCCEEEEEc-CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHH
Q 020487           80 KVGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQ  158 (325)
Q Consensus        80 ~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~  158 (325)
                      ++||+|++.. .+|+|+||++++++.++++|+++++++||+++..++|||+++.+.+++++|++|||+|++|++|++++|
T Consensus       107 ~vGdrV~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiq  186 (357)
T 1zsy_A          107 KPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQ  186 (357)
T ss_dssp             CTTCEEEESSSCSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHH
T ss_pred             CCCCEEEEcCCCCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHH
Confidence            9999999875 369999999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             HHHHCCCEEEEEecChh----hHHHHHHcCCCEEEeCCCchHHHHHHHHhCCC-cccEEEeCCChHHHHHhhccccCCCE
Q 020487          159 MGKCQGVRVFVTAGSEE----KLAVCKDLGADVCINYKTEDFVARVKEETGGK-GVDVILDCMGASYFQRNLGSLNIDGR  233 (325)
Q Consensus       159 ~a~~~g~~v~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vi~~~g~~~~~~~~~~l~~~g~  233 (325)
                      +|+..|+++++++++.+    +++.++++|+++++++.... ...+.+.+++. ++|++|||+|++.+..++++++++|+
T Consensus       187 lak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~-~~~~~~~~~~~~~~Dvvid~~g~~~~~~~~~~l~~~G~  265 (357)
T 1zsy_A          187 IAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELR-RPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGT  265 (357)
T ss_dssp             HHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHH-SGGGGGTTSSSCCCSEEEESSCHHHHHHHHTTSCTTCE
T ss_pred             HHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcch-HHHHHHHHhCCCCceEEEECCCcHHHHHHHHhhCCCCE
Confidence            99999999888876543    46778899999998754211 12334444433 59999999999887788999999999


Q ss_pred             EEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHH
Q 020487          234 LFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLME  313 (325)
Q Consensus       234 ~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~  313 (325)
                      ++.+|........++...++.+++++.++....+.....+...++.++++++++.+|++++.+.++|+++++++|++.+.
T Consensus       266 iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~  345 (357)
T 1zsy_A          266 MVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASM  345 (357)
T ss_dssp             EEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHT
T ss_pred             EEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCccceEEcHHHHHHHHHHHH
Confidence            99998655444556677777899999998664322111122345667779999999999988889999999999999999


Q ss_pred             hCCCceeEEEeC
Q 020487          314 SSQHIGKIMLVP  325 (325)
Q Consensus       314 ~~~~~gkvvi~~  325 (325)
                      +++..||+|+++
T Consensus       346 ~~~~~gKvvl~~  357 (357)
T 1zsy_A          346 KPFISSKQILTM  357 (357)
T ss_dssp             SSSCSSEEEEEC
T ss_pred             hCCCCCcEEEeC
Confidence            888889999975

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=2.7e-54  Score=379.56  Aligned_cols=314  Identities=19%  Similarity=0.270  Sum_probs=275.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..+++++.+++++.+.|+|+++||+|||.++|||++|++.+.|..+....+|.++|||++|+|+++|  +++|+
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~   78 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH   78 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence            9999999999988899999999999999999999999999999999999887656779999999999999998  57899


Q ss_pred             CCCEEEEEc------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH--hhcCCCCCC-EEEEEcCCch
Q 020487           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF--MTSHLSPGE-SFLVHGGSSG  151 (325)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~--~~~~~~~~~-~vli~g~~g~  151 (325)
                      +||+|+...      .+|+|+||++++++.++++|+++++++||+++..++|||.++.  .+.++++++ +|||+|++|+
T Consensus        79 vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~  158 (324)
T 3nx4_A           79 AGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGG  158 (324)
T ss_dssp             TTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSH
T ss_pred             CCCEEEEcccccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcH
Confidence            999999763      5799999999999999999999999999999999999999885  445567633 4999999999


Q ss_pred             HHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCC
Q 020487          152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID  231 (325)
Q Consensus       152 ~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~  231 (325)
                      +|++++|+|+..|++|+++++++++++.++++|+++++++++...   +++.++ .++|++|||+|++.+..++++++++
T Consensus       159 vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~---~~~~~~-~~~d~v~d~~g~~~~~~~~~~l~~~  234 (324)
T 3nx4_A          159 VGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAE---SRPLEK-QLWAGAIDTVGDKVLAKVLAQMNYG  234 (324)
T ss_dssp             HHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSC---CCSSCC-CCEEEEEESSCHHHHHHHHHTEEEE
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHH---HHhhcC-CCccEEEECCCcHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999998766443   233333 4799999999999889999999999


Q ss_pred             CEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHH
Q 020487          232 GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL  311 (325)
Q Consensus       232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~  311 (325)
                      |+++.+|........++...++.+++++.++.......    ....+.++.+.+++.+|++++. +++|+++++++|++.
T Consensus       235 G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~  309 (324)
T 3nx4_A          235 GCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPP----ARRAEAWARLVKDLPESFYAQA-ATEITLADAPKFADA  309 (324)
T ss_dssp             EEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCH----HHHHHHHHHHHHHSCHHHHHHH-EEEEEGGGHHHHHHH
T ss_pred             CEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccCh----HHHHHHHHHHHHHHHcCCCCCC-ceeEeHHHHHHHHHH
Confidence            99999998765445566777888999999986544322    2335566778899999999887 999999999999999


Q ss_pred             HHhCCCceeEEEeC
Q 020487          312 MESSQHIGKIMLVP  325 (325)
Q Consensus       312 ~~~~~~~gkvvi~~  325 (325)
                      +++++..||+|+++
T Consensus       310 ~~~~~~~gkvvv~~  323 (324)
T 3nx4_A          310 IINNQVQGRTLVKI  323 (324)
T ss_dssp             HHTTCCCSEEEEEC
T ss_pred             HHhCCCCceEEEec
Confidence            99999999999975

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.8e-53  Score=375.17  Aligned_cols=306  Identities=23%  Similarity=0.353  Sum_probs=270.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCC-CCCCeEEEEEeeeecChhhhhhhhCCCCC--CCCCCCCCCCceeEEEEEecCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVS   77 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~-~~~~ev~v~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~   77 (325)
                      |||+++..++++  +++++.|.|+ |+++||+|||.++|||++|++.+.|.++.  ...+|.++|||++|+|+++|++++
T Consensus        16 mka~~~~~~g~~--l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   93 (359)
T 1h2b_A           16 LKAARLHEYNKP--LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVE   93 (359)
T ss_dssp             -CEEEESSTTSC--CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             ceEEEEecCCCC--cEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCCCC
Confidence            899999988754  8899999999 99999999999999999999999987641  224688999999999999999999


Q ss_pred             CCCCCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhc---cCcchHHHH
Q 020487           78 RWKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAA---AFPEVACTV  127 (325)
Q Consensus        78 ~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa---~l~~~~~~a  127 (325)
                      +|++||+|++..                           .+|+|+||++++++.++++|+++++++|+   ++++++.||
T Consensus        94 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~ta  173 (359)
T 1h2b_A           94 GLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITA  173 (359)
T ss_dssp             SCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTHHHHH
T ss_pred             CCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhccchhhhHHHH
Confidence            999999998753                           36999999999999999999999999998   888999999


Q ss_pred             HHHHHhh-cCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhC
Q 020487          128 WSTVFMT-SHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG  205 (325)
Q Consensus       128 ~~~l~~~-~~~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  205 (325)
                      |+++.+. +++++|++|||+|+ |++|++++|+|+.+ |++|+++++++++++.++++|+++++|+++. +.+.+.+.++
T Consensus       174 ~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-~~~~v~~~~~  251 (359)
T 1h2b_A          174 YRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD-PVKQVMELTR  251 (359)
T ss_dssp             HHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSC-HHHHHHHHTT
T ss_pred             HHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccch-HHHHHHHHhC
Confidence            9999665 89999999999999 99999999999999 9999999999999999999999999998877 7788888887


Q ss_pred             CCcccEEEeCCChH---HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHH
Q 020487          206 GKGVDVILDCMGAS---YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKN  282 (325)
Q Consensus       206 ~~~~d~vi~~~g~~---~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  282 (325)
                      ++++|++|||+|.+   .+..++++  ++|+++.+|.....  .++...++.+++++.++....          .+.+++
T Consensus       252 g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~--~~~~~~~~~~~~~i~g~~~~~----------~~~~~~  317 (359)
T 1h2b_A          252 GRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL--RFPTIRVISSEVSFEGSLVGN----------YVELHE  317 (359)
T ss_dssp             TCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC--CCCHHHHHHTTCEEEECCSCC----------HHHHHH
T ss_pred             CCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC--CCCHHHHHhCCcEEEEecCCC----------HHHHHH
Confidence            77899999999987   66777777  99999999876543  567777888999999876432          123455


Q ss_pred             HHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          283 VWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       283 ~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++++.+|++++.+ ++|+++++++|++.+++++..||+|++|
T Consensus       318 ~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          318 LVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             HHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            89999999999888 9999999999999999988889999986

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=3.5e-53  Score=377.18  Aligned_cols=318  Identities=22%  Similarity=0.312  Sum_probs=275.5

Q ss_pred             CEEEEEcCC---CCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCC
Q 020487            1 MKAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS   77 (325)
Q Consensus         1 m~a~~~~~~---~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~   77 (325)
                      |||+++..+   ++++.+++++.|.|+|+++||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|++++
T Consensus        23 MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G~V~~vG~~v~  101 (363)
T 4dvj_A           23 MKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPD-GTDWKVIGYDAAGIVSAVGPDVT  101 (363)
T ss_dssp             EEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC---CCSBCCCCCEEEEEEEECTTCC
T ss_pred             eEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCC-CCCCCcccceeEEEEEEeCCCCC
Confidence            799999987   55678999999999999999999999999999999999988764 35688999999999999999999


Q ss_pred             CCCCCCEEEEEc---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCC-----CCCEEEEEcCC
Q 020487           78 RWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS-----PGESFLVHGGS  149 (325)
Q Consensus        78 ~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~-----~~~~vli~g~~  149 (325)
                      +|++||+|+++.   .+|+|+||++++++.++++|+++++++||+++.+++|||+++.+..+++     +|++|||+|++
T Consensus       102 ~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~  181 (363)
T 4dvj_A          102 LFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGA  181 (363)
T ss_dssp             SCCTTCEEEECCCTTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTT
T ss_pred             CCCCCCEEEEccCCCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCC
Confidence            999999999864   4699999999999999999999999999999999999999998888888     89999999988


Q ss_pred             chHHHHHHHHHHH-CCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH-HHHHhhcc
Q 020487          150 SGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGS  227 (325)
Q Consensus       150 g~~G~~~~~~a~~-~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~  227 (325)
                      |++|++++|+|+. .|++|+++++++++++.++++|+++++++.. ++.+.+.+. +++++|++|||+|+. .+..++++
T Consensus       182 G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~-~~~~~v~~~-~~~g~Dvvid~~g~~~~~~~~~~~  259 (363)
T 4dvj_A          182 GGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSK-PLAAEVAAL-GLGAPAFVFSTTHTDKHAAEIADL  259 (363)
T ss_dssp             SHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTS-CHHHHHHTT-CSCCEEEEEECSCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCC-CHHHHHHHh-cCCCceEEEECCCchhhHHHHHHH
Confidence            9999999999998 5899999999999999999999999998865 566677766 566899999999986 57888999


Q ss_pred             ccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccch--hHHHHHHHHHHHHHHHHHCCcccccccccc---ch
Q 020487          228 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTE--NKALIVSEVEKNVWPAIAVGKVKPVIYKYL---PL  302 (325)
Q Consensus       228 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~---~l  302 (325)
                      ++++|+++.+|..    ..++...+..+++++.++........  .......+.++++++++.+|++++.+++++   ++
T Consensus       260 l~~~G~iv~~g~~----~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l  335 (363)
T 4dvj_A          260 IAPQGRFCLIDDP----SAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSPINA  335 (363)
T ss_dssp             SCTTCEEEECSCC----SSCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCCCEEEEECSCSH
T ss_pred             hcCCCEEEEECCC----CccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeeccccceecCCCH
Confidence            9999999998642    24566667778899988655432111  111223566777999999999999887655   99


Q ss_pred             hhHHHHHHHHHhCCCceeEEEeC
Q 020487          303 CEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       303 ~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++++|++.+.+++..||+|++|
T Consensus       336 ~~~~~A~~~~~~~~~~GKvVl~~  358 (363)
T 4dvj_A          336 ANLKQAHALVESGTARGKVVIEG  358 (363)
T ss_dssp             HHHHHHHHHHHHTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHhCCCceEEEEeC
Confidence            99999999999999999999987

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=3.3e-53  Score=375.58  Aligned_cols=308  Identities=24%  Similarity=0.367  Sum_probs=274.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC-CCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-PKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      |||++++.++++  +++++.|.|+|+++||+|||.+++||++|++.+.|..+. ...+|.++|||++|+|+++|+++++|
T Consensus         1 MkA~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~   78 (345)
T 3jv7_A            1 MKAVQYTEIGSE--PVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGF   78 (345)
T ss_dssp             CEEEEECSTTSC--CEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSC
T ss_pred             CeEEEEcCCCCc--eEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCC
Confidence            999999999876  899999999999999999999999999999999997653 23568899999999999999999999


Q ss_pred             CCCCEEEEEc--------------------------------CCceeeeEEeec-CCceeeCCCCCCHHhhccCcchHHH
Q 020487           80 KVGDQVCALL--------------------------------GGGGYAEKVAVP-AGQVLPVPSGVSLKDAAAFPEVACT  126 (325)
Q Consensus        80 ~~Gd~V~~~~--------------------------------~~g~~~~~~~~~-~~~~~~~p~~~~~~~aa~l~~~~~~  126 (325)
                      ++||+|++..                                .+|+|+||++++ ++.++++|+ ++++++++++.+++|
T Consensus        79 ~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~t  157 (345)
T 3jv7_A           79 GVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGLT  157 (345)
T ss_dssp             CTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTHH
T ss_pred             CCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHHH
Confidence            9999998742                                369999999999 899999999 999999999999999


Q ss_pred             HHHHHHh-hcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHh
Q 020487          127 VWSTVFM-TSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET  204 (325)
Q Consensus       127 a~~~l~~-~~~~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  204 (325)
                      ||+++.+ ...+++|++|+|+|+ |++|++++|+|+.. |++|+++++++++++.++++|++++++++. ++.+.+++.+
T Consensus       158 a~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~v~~~t  235 (345)
T 3jv7_A          158 PYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA-GAADAIRELT  235 (345)
T ss_dssp             HHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST-THHHHHHHHH
T ss_pred             HHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC-cHHHHHHHHh
Confidence            9999966 458999999999998 99999999999999 679999999999999999999999998876 7788899999


Q ss_pred             CCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHH
Q 020487          205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV  283 (325)
Q Consensus       205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  283 (325)
                      +++++|++|||+|.. .+..++++++++|+++.+|........++. .++.+++++.++.....          +.++++
T Consensus       236 ~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~~----------~~~~~~  304 (345)
T 3jv7_A          236 GGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGTR----------SELMEV  304 (345)
T ss_dssp             GGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCCH----------HHHHHH
T ss_pred             CCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCCH----------HHHHHH
Confidence            888999999999987 678999999999999999977653445554 66778999988765432          334558


Q ss_pred             HHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          284 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       284 ~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ++++.+|++++ ++++|+++++++|++.+.+++..||+|++|
T Consensus       305 ~~l~~~g~l~~-~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          305 VALARAGRLDI-HTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             HHHHHTTCCCC-CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             HHHHHcCCCce-EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            99999999987 558999999999999999999999999987

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=8.2e-53  Score=369.33  Aligned_cols=305  Identities=29%  Similarity=0.416  Sum_probs=265.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCC--C--CCCCCCCCCCCceeEEEEEecCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY--P--PPKGASPYPGLECSGTILSVGKNV   76 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~--~--~~~~~p~~~G~e~~G~V~~vG~~~   76 (325)
                      |||+++..+++++.+++++.+.|+|+++||+|||.++|||++|++.+.|..  +  ....+|.++|||++|+|+++|+++
T Consensus         7 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG~~v   86 (321)
T 3tqh_A            7 MKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSDV   86 (321)
T ss_dssp             EEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEECTTC
T ss_pred             ceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeCCCC
Confidence            799999999998889999999999999999999999999999999998832  1  123468899999999999999999


Q ss_pred             CCCCCCCEEEEEc----CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchH
Q 020487           77 SRWKVGDQVCALL----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI  152 (325)
Q Consensus        77 ~~~~~Gd~V~~~~----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~  152 (325)
                      ++|++||+|+++.    .+|+|+||++++++.++++|++++++++++++.+++|||+++ +.+++++|++|+|+|++|++
T Consensus        87 ~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~v  165 (321)
T 3tqh_A           87 NNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGV  165 (321)
T ss_dssp             CSCCTTCEEEEECSTTTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHH
T ss_pred             CCCCCCCEEEEccCCCCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHH
Confidence            9999999999885    469999999999999999999999999999999999999999 88999999999999988999


Q ss_pred             HHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCch-HHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCC
Q 020487          153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED-FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID  231 (325)
Q Consensus       153 G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~  231 (325)
                      |++++|+|+..|++|++++ ++++++.++++|++++++++..+ +.+.+      +++|++|||+|++.+..++++++++
T Consensus       166 G~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~~~i~~~~~~~~~~~~------~g~D~v~d~~g~~~~~~~~~~l~~~  238 (321)
T 3tqh_A          166 GHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAEQCINYHEEDFLLAIS------TPVDAVIDLVGGDVGIQSIDCLKET  238 (321)
T ss_dssp             HHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCSEEEETTTSCHHHHCC------SCEEEEEESSCHHHHHHHGGGEEEE
T ss_pred             HHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCCEEEeCCCcchhhhhc------cCCCEEEECCCcHHHHHHHHhccCC
Confidence            9999999999999999988 56668899999999999988766 43332      4799999999998888999999999


Q ss_pred             CEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHH
Q 020487          232 GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL  311 (325)
Q Consensus       232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~  311 (325)
                      |+++.+|.....   .....+..+++++.++.....         .+.++.+++++.+|++++.++++|+++++++|++.
T Consensus       239 G~iv~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~  306 (321)
T 3tqh_A          239 GCIVSVPTITAG---RVIEVAKQKHRRAFGLLKQFN---------IEELHYLGKLVSEDKLRIEISRIFQLSEAVTAHEL  306 (321)
T ss_dssp             EEEEECCSTTHH---HHHHHHHHTTCEEECCCCCCC---------HHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHH
T ss_pred             CEEEEeCCCCch---hhhhhhhhcceEEEEEecCCC---------HHHHHHHHHHHHCCCcccccccEEcHHHHHHHHHH
Confidence            999999754321   112235567888887532211         13455589999999999999999999999999999


Q ss_pred             HHhCCCceeEEEeC
Q 020487          312 MESSQHIGKIMLVP  325 (325)
Q Consensus       312 ~~~~~~~gkvvi~~  325 (325)
                      +++++..||+|+++
T Consensus       307 ~~~~~~~gKvvl~~  320 (321)
T 3tqh_A          307 LETGHVRGKLVFKV  320 (321)
T ss_dssp             HHTTCCCSEEEEEC
T ss_pred             HHcCCCCceEEEEe
Confidence            99999999999975

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=8.8e-53  Score=372.13  Aligned_cols=307  Identities=26%  Similarity=0.383  Sum_probs=274.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++++  +++++.|.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus         3 MkA~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~   80 (340)
T 3s2e_A            3 MKAAVVRAFGAP--LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVK   80 (340)
T ss_dssp             EEEEEBCSTTSC--CEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCC
T ss_pred             eEEEEEecCCCC--CEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCC
Confidence            899999988766  999999999999999999999999999999999998876566799999999999999999999999


Q ss_pred             CCCEEEEE----------------------------cCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487           81 VGDQVCAL----------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (325)
Q Consensus        81 ~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~  132 (325)
                      +||+|...                            ..+|+|+||++++++.++++|+++++++|+++++.+.|||+++ 
T Consensus        81 vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l-  159 (340)
T 3s2e_A           81 EGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGL-  159 (340)
T ss_dssp             TTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHHH-
T ss_pred             CCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHHH-
Confidence            99999421                            1369999999999999999999999999999999999999999 


Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      +..++++|++|||+|+ |++|++++|+|+..|++|+++++++++++.++++|++++++++..++.+.+.+..+  ++|++
T Consensus       160 ~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g--~~d~v  236 (340)
T 3s2e_A          160 KVTDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIG--GAHGV  236 (340)
T ss_dssp             HTTTCCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHS--SEEEE
T ss_pred             HHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCC--CCCEE
Confidence            6779999999999998 99999999999999999999999999999999999999999998888888888444  79999


Q ss_pred             EeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCc
Q 020487          213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                      |||+|. ..+..++++++++|+++.+|.... ....+...++.+++++.++.....          +.++++++++.+|+
T Consensus       237 id~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~l~~~g~  305 (340)
T 3s2e_A          237 LVTAVSPKAFSQAIGMVRRGGTIALNGLPPG-DFGTPIFDVVLKGITIRGSIVGTR----------SDLQESLDFAAHGD  305 (340)
T ss_dssp             EESSCCHHHHHHHHHHEEEEEEEEECSCCSS-EEEEEHHHHHHTTCEEEECCSCCH----------HHHHHHHHHHHTTS
T ss_pred             EEeCCCHHHHHHHHHHhccCCEEEEeCCCCC-CCCCCHHHHHhCCeEEEEEecCCH----------HHHHHHHHHHHhCC
Confidence            999985 567889999999999999987654 345667778889999999865432          23455899999999


Q ss_pred             cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          292 VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       292 l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++.+ +.++++++++|++.+++++..||+|+++
T Consensus       306 l~~~~-~~~~l~~~~~A~~~~~~~~~~Gkvvv~~  338 (340)
T 3s2e_A          306 VKATV-STAKLDDVNDVFGRLREGKVEGRVVLDF  338 (340)
T ss_dssp             CCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CCceE-EEEeHHHHHHHHHHHHcCCCceEEEEec
Confidence            98765 6789999999999999999999999975

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=3.4e-53  Score=378.31  Aligned_cols=324  Identities=22%  Similarity=0.275  Sum_probs=276.7

Q ss_pred             CEEEEEcCCCCC-cceEEEeecCCCCC--CCeEEEEEeeeecChhhhhhhhCCCCCCCCCC---------CCCCCceeEE
Q 020487            1 MKAIVITQPGSP-EVLQLQEVEDPQIK--DDEVLIKVEATALNRADTLQRKGSYPPPKGAS---------PYPGLECSGT   68 (325)
Q Consensus         1 m~a~~~~~~~~~-~~l~~~~~~~~~~~--~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p---------~~~G~e~~G~   68 (325)
                      |||+++..++++ +.+++++.+.|+|.  ++||+|||.++|||++|++.+.|.++....+|         .++|||++|+
T Consensus         4 mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~~G~   83 (364)
T 1gu7_A            4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFE   83 (364)
T ss_dssp             EEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEEE
T ss_pred             EEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCceeEEE
Confidence            799999998875 55899999988877  99999999999999999999999776433456         7899999999


Q ss_pred             EEEecCCCCCCCCCCEEEEEc-CCceeeeEEeecCCceeeCCC-----------CCCHHhhccCcchHHHHHHHHHhhcC
Q 020487           69 ILSVGKNVSRWKVGDQVCALL-GGGGYAEKVAVPAGQVLPVPS-----------GVSLKDAAAFPEVACTVWSTVFMTSH  136 (325)
Q Consensus        69 V~~vG~~~~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~-----------~~~~~~aa~l~~~~~~a~~~l~~~~~  136 (325)
                      |+++|+++++|++||+|++.. .+|+|+||++++++.++++|+           ++++++||+++++++|||+++.+..+
T Consensus        84 V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~  163 (364)
T 1gu7_A           84 VIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVK  163 (364)
T ss_dssp             EEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSC
T ss_pred             EEEeCCCCCcCCCCCEEEecCCCCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhc
Confidence            999999999999999999875 469999999999999999998           89999999999999999999977778


Q ss_pred             CCCC-CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh----HHHHHHcCCCEEEeCCC---chHHHHHHHHh--CC
Q 020487          137 LSPG-ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK----LAVCKDLGADVCINYKT---EDFVARVKEET--GG  206 (325)
Q Consensus       137 ~~~~-~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~----~~~~~~~g~~~~~~~~~---~~~~~~~~~~~--~~  206 (325)
                      +++| ++|||+|++|++|++++|+|+..|++|++++++.++    ++.++++|++++++++.   .++.+.+++.+  ++
T Consensus       164 ~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~  243 (364)
T 1gu7_A          164 LTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG  243 (364)
T ss_dssp             CCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred             cCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccC
Confidence            9999 999999999999999999999999999999866554    57778999999998764   56777888877  55


Q ss_pred             CcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHH
Q 020487          207 KGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPA  286 (325)
Q Consensus       207 ~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (325)
                      .++|++|||+|...+..++++++++|+++.+|........++...++.+++++.++......... +....+.+++++++
T Consensus       244 ~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~l  322 (364)
T 1gu7_A          244 GEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNN-KELKTSTLNQIIAW  322 (364)
T ss_dssp             CCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEECCHHHHHTTC-HHHHHHHHHHHHHH
T ss_pred             CCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCCCcccCHHHHhhcCcEEEEEchhHhcccC-HHHHHHHHHHHHHH
Confidence            68999999999988778899999999999998766444456777778899999998654322111 22345667779999


Q ss_pred             HHCCccccccccccchh---hHHHHHHHHHhCCCceeEEEeC
Q 020487          287 IAVGKVKPVIYKYLPLC---EAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       287 ~~~g~l~~~~~~~~~l~---~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +.+|++++.+..+++++   ++++|++.+.+++..||+|+++
T Consensus       323 ~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          323 YEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             HHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            99999988766777664   9999999999888889999875

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=5.6e-52  Score=368.14  Aligned_cols=312  Identities=23%  Similarity=0.255  Sum_probs=268.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCC-CCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~-~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      |||++++.+|.   +++++.|.|+ +++|||+|||.++|||++|++.+.|..+.  .+|.++|||++|+|+++|++++.+
T Consensus         1 MkAvv~~~~g~---l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~~--~~P~i~G~E~~G~V~~vG~~V~~~   75 (346)
T 4a2c_A            1 MKSVVNDTDGI---VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAH--YYPITLGHEFSGYIDAVGSGVDDL   75 (346)
T ss_dssp             CEEEEECSSSC---EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCSS--SSSBCCCCEEEEEEEEECTTCCSC
T ss_pred             CCEEEEecCCC---EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCCC--CCCccccEEEEEEEEEECCCcccc
Confidence            99999998886   9999999998 47999999999999999999999887654  468999999999999999999999


Q ss_pred             CCCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487           80 KVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (325)
Q Consensus        80 ~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~  132 (325)
                      ++||+|+...                           .+|+|+||++++++.++++|+++++++||++. +..+++.+ .
T Consensus        76 ~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~~~~~~-~  153 (346)
T 4a2c_A           76 HPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGLHA-F  153 (346)
T ss_dssp             CTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHHHHHHH-H
T ss_pred             cCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhch-HHHHHHHH-H
Confidence            9999998632                           35899999999999999999999999998664 34444444 4


Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccE
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      ...++++|++|+|+|+ |++|++++|+|+.+|++ ++++++++++++.++++|+++++++++.+..+...+.+++.++|+
T Consensus       154 ~~~~~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~  232 (346)
T 4a2c_A          154 HLAQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQL  232 (346)
T ss_dssp             HHTTCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEE
T ss_pred             HHhccCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCccc
Confidence            7888999999999998 99999999999999985 577888999999999999999999999888888888888889999


Q ss_pred             EEeCCChH-HHHHhhccccCCCEEEEEeccCCcc--cccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHH
Q 020487          212 ILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA  288 (325)
Q Consensus       212 vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (325)
                      ++||+|.. .+..++++++++|+++.+|....+.  ...+...++.+++++.|+.........     .+.++.+++++.
T Consensus       233 v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~-----~~~~~~~~~l~~  307 (346)
T 4a2c_A          233 ILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWP-----GQEWETASRLLT  307 (346)
T ss_dssp             EEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTT-----CHHHHHHHHHHH
T ss_pred             ccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcch-----HHHHHHHHHHHH
Confidence            99999965 5688899999999999999876542  234456677899999998765433221     123455889999


Q ss_pred             CCcc--ccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          289 VGKV--KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       289 ~g~l--~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +|++  +++++++|+|+++++|++.+++++..||+|++|
T Consensus       308 ~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          308 ERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             TTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             cCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            9987  456889999999999999999999999999998

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=4.9e-52  Score=368.81  Aligned_cols=308  Identities=27%  Similarity=0.390  Sum_probs=272.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++...++ ..+++++.|.|+|+++||+|||.++|||++|++++.|.++.  .+|.++|||++|+|+++|++++.|+
T Consensus         1 MKA~v~~~~~~-~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~~--~~p~i~GhE~aG~V~~vG~~V~~~~   77 (348)
T 4eez_A            1 MKAAVVRHNPD-GYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGN--KAGTVLGHEGIGIVKEIGADVSSLQ   77 (348)
T ss_dssp             CEEEEECSSCC-SSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTCC--CTTCBCCSEEEEEEEEECTTCCSCC
T ss_pred             CeEEEEEcCCC-CcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCCC--CCCcccceeEEEEEEEECceeeecc
Confidence            99999875332 34899999999999999999999999999999999998765  3589999999999999999999999


Q ss_pred             CCCEEEEEc----------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487           81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (325)
Q Consensus        81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~  132 (325)
                      +||+|+...                            .+|+|+||+.++++.++++|+++++++|++++++++|+|.++ 
T Consensus        78 ~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l-  156 (348)
T 4eez_A           78 VGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI-  156 (348)
T ss_dssp             TTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHHH-
T ss_pred             cCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEeee-
Confidence            999997531                            258999999999999999999999999999999999999998 


Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccE
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      +..++++|++|+|+|+ |++|.+++|+++.. |++|+++++++++++.++++|+++++|+.+.++.+.+.+.+++.++|.
T Consensus       157 ~~~~~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~  235 (348)
T 4eez_A          157 KVSGVKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQS  235 (348)
T ss_dssp             HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEE
T ss_pred             cccCCCCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceE
Confidence            6678899999999998 88999999999876 679999999999999999999999999999999999999999999999


Q ss_pred             EEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCC
Q 020487          212 ILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG  290 (325)
Q Consensus       212 vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  290 (325)
                      +++|+++. .+...+++++++|+++.+|.... ...++...++.+++++.|+...+.          +.++++++++.+|
T Consensus       236 ~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~gs~~~~~----------~~~~~~~~l~~~g  304 (348)
T 4eez_A          236 AIVCAVARIAFEQAVASLKPMGKMVAVAVPNT-EMTLSVPTVVFDGVEVAGSLVGTR----------LDLAEAFQFGAEG  304 (348)
T ss_dssp             EEECCSCHHHHHHHHHTEEEEEEEEECCCCSC-EEEECHHHHHHSCCEEEECCSCCH----------HHHHHHHHHHHTT
T ss_pred             EEEeccCcchhheeheeecCCceEEEEeccCC-CCccCHHHHHhCCeEEEEEecCCH----------HHHHHHHHHHHcC
Confidence            99998865 46888999999999999987554 346777888889999999866532          1234488999999


Q ss_pred             ccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          291 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       291 ~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ++++.+ ++|+|+++++|++.+++++..||+||++
T Consensus       305 ~i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~  338 (348)
T 4eez_A          305 KVKPIV-ATRKLEEINDIIDEMKAGKIEGRMVIDF  338 (348)
T ss_dssp             SCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             CCEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEEc
Confidence            998765 7899999999999999999999999975

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=6.7e-52  Score=371.41  Aligned_cols=311  Identities=21%  Similarity=0.270  Sum_probs=272.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++++  +++++.|.|+|+++||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|+++++|+
T Consensus         9 mkA~v~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~   85 (378)
T 3uko_A            9 CKAAVAYEPNKP--LVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ   85 (378)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTT-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             eEEEEEecCCCc--cEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCC-CCCCccCCccceEEEEEeCCCCCcCC
Confidence            799999998876  899999999999999999999999999999999998653 35689999999999999999999999


Q ss_pred             CCCEEEEEcC-------------------------------------------------CceeeeEEeecCCceeeCCCC
Q 020487           81 VGDQVCALLG-------------------------------------------------GGGYAEKVAVPAGQVLPVPSG  111 (325)
Q Consensus        81 ~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~  111 (325)
                      +||+|++...                                                 .|+|+||++++++.++++|++
T Consensus        86 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  165 (378)
T 3uko_A           86 AGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPT  165 (378)
T ss_dssp             TTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEECCCC
Confidence            9999986532                                                 158999999999999999999


Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEe
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN  190 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (325)
                      +++++|+++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++++++
T Consensus       166 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~  244 (378)
T 3uko_A          166 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVN  244 (378)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEEC
T ss_pred             CCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEc
Confidence            9999999999999999999988899999999999998 9999999999999999 8999999999999999999999998


Q ss_pred             CC--CchHHHHHHHHhCCCcccEEEeCCChH-HHHHhhccccCC-CEEEEEeccCC-cccccchHHHHhhccEeeecccc
Q 020487          191 YK--TEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLR  265 (325)
Q Consensus       191 ~~--~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~  265 (325)
                      +.  ..++.+.+++.+++ ++|++|||+|.. .+..++++++++ |+++.+|.... ....++...++. ++++.|+...
T Consensus       245 ~~~~~~~~~~~i~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  322 (378)
T 3uko_A          245 PKDHDKPIQEVIVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  322 (378)
T ss_dssp             GGGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHT-TCEEEECSGG
T ss_pred             cccCchhHHHHHHHhcCC-CCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhc-CcEEEEEEec
Confidence            87  57788889999887 999999999984 578899999996 99999997553 234455555554 8888887655


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          266 SRSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ....       .+.++++++++.+|+++  ++++++|+|+++++|++.+++++.. |+|+++
T Consensus       323 ~~~~-------~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~  376 (378)
T 3uko_A          323 GFKS-------RTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDT  376 (378)
T ss_dssp             GCCH-------HHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEET
T ss_pred             CCCc-------hHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEec
Confidence            3321       23455588999999876  5689999999999999999888765 999875

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=1.3e-51  Score=364.26  Aligned_cols=307  Identities=29%  Similarity=0.408  Sum_probs=270.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++++  +++++.|.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~   78 (339)
T 1rjw_A            1 MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (339)
T ss_dssp             CEEEEBSSTTSC--CEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEcCCCCC--cEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCC
Confidence            999999988854  889999999999999999999999999999999997764445789999999999999999999999


Q ss_pred             CCCEEEEE----------------------------cCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487           81 VGDQVCAL----------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (325)
Q Consensus        81 ~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~  132 (325)
                      +||+|+..                            ..+|+|+||++++++.++++|+++++++|++++++++|||+++.
T Consensus        79 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~  158 (339)
T 1rjw_A           79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALK  158 (339)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHH
T ss_pred             CCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence            99999852                            13589999999999999999999999999999999999999995


Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      .. ++++|++|||+|+ |++|++++|+++..|++|+++++++++++.++++|++.+++....++.+.+.+.+  .++|++
T Consensus       159 ~~-~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~--~~~d~v  234 (339)
T 1rjw_A          159 VT-GAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKV--GGVHAA  234 (339)
T ss_dssp             HH-TCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHH--SSEEEE
T ss_pred             hc-CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHh--CCCCEE
Confidence            54 8999999999999 8899999999999999999999999999999999999999888777777777777  379999


Q ss_pred             EeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCc
Q 020487          213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                      |||+|. ..+..++++++++|+++.+|..... ..++...++.+++++.++.....          +.++++++++.+|+
T Consensus       235 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~l~~~g~  303 (339)
T 1rjw_A          235 VVTAVSKPAFQSAYNSIRRGGACVLVGLPPEE-MPIPIFDTVLNGIKIIGSIVGTR----------KDLQEALQFAAEGK  303 (339)
T ss_dssp             EESSCCHHHHHHHHHHEEEEEEEEECCCCSSE-EEEEHHHHHHTTCEEEECCSCCH----------HHHHHHHHHHHTTS
T ss_pred             EECCCCHHHHHHHHHHhhcCCEEEEecccCCC-CccCHHHHHhCCcEEEEeccCCH----------HHHHHHHHHHHcCC
Confidence            999997 5678889999999999999876543 45666777889999998754321          23455889999999


Q ss_pred             cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          292 VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       292 l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++. +++|+++++++|++.+++++..||+|+++
T Consensus       304 l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (339)
T 1rjw_A          304 VKTI-IEVQPLEKINEVFDRMLKGQINGRVVLTL  336 (339)
T ss_dssp             CCCC-EEEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             CCcc-EEEEcHHHHHHHHHHHHcCCCceEEEEec
Confidence            9876 47899999999999999988889999875

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.7e-51  Score=368.07  Aligned_cols=310  Identities=25%  Similarity=0.305  Sum_probs=272.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++++  +++++.|.|+|+++||+|||.++|||++|++.+.|.++.  .+|.++|||++|+|+++|+++++|+
T Consensus         7 mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~P~v~GhE~~G~V~~vG~~v~~~~   82 (371)
T 1f8f_A            7 IIAAVTPCKGAD--FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV--PLPAVLGHEGSGIIEAIGPNVTELQ   82 (371)
T ss_dssp             EEEEEBCSTTCC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC--CSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             ceEEEEcCCCCC--eEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCCC--CCCcccCcccceEEEEeCCCCCCCC
Confidence            799999988754  889999999999999999999999999999999997652  4688999999999999999999999


Q ss_pred             CCCEEEEEc-------------------------------------------------CCceeeeEEeecCCceeeCCCC
Q 020487           81 VGDQVCALL-------------------------------------------------GGGGYAEKVAVPAGQVLPVPSG  111 (325)
Q Consensus        81 ~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~  111 (325)
                      +||+|+...                                                 .+|+|+||++++++.++++|++
T Consensus        83 ~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP~~  162 (371)
T 1f8f_A           83 VGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKD  162 (371)
T ss_dssp             TTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTT
T ss_pred             CCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEECCCC
Confidence            999998621                                                 2489999999999999999999


Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEe
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN  190 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (325)
                      +++++|+++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++++++
T Consensus       163 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~  241 (371)
T 1f8f_A          163 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVIN  241 (371)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEec
Confidence            9999999999999999999988889999999999997 9999999999999999 7999999999999999999999999


Q ss_pred             CCCchHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCC-cccccchHHHHhhccEeeeccccccc
Q 020487          191 YKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRSRS  268 (325)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~  268 (325)
                      +...++.+.+.+.+++ ++|++|||+|. ..+..++++++++|+++.+|.... ....++...++.+++++.++......
T Consensus       242 ~~~~~~~~~~~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  320 (371)
T 1f8f_A          242 SKTQDPVAAIKEITDG-GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGS  320 (371)
T ss_dssp             TTTSCHHHHHHHHTTS-CEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSC
T ss_pred             CCccCHHHHHHHhcCC-CCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCCCCc
Confidence            9888888888888877 89999999997 467889999999999999987653 23456777788899999998654321


Q ss_pred             chhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          269 TENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                         .    .+.++++++++.+|++++  ++++ |+|+++++|++.+++++. +|+|++|
T Consensus       321 ---~----~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~  370 (371)
T 1f8f_A          321 ---P----KKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKI  370 (371)
T ss_dssp             ---H----HHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEEC
T ss_pred             ---h----HHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEee
Confidence               1    234566999999999875  5677 999999999999988776 7999875

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=1.8e-51  Score=364.55  Aligned_cols=310  Identities=29%  Similarity=0.410  Sum_probs=273.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC-------CCCCCCCCCCceeEEEEEec
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-------PKGASPYPGLECSGTILSVG   73 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~-------~~~~p~~~G~e~~G~V~~vG   73 (325)
                      |||+++..++++  +++++.|.|+|+++||+|||.++|||++|++.+.|.++.       ...+|.++|||++|+|+++|
T Consensus         1 Mka~~~~~~g~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   78 (347)
T 1jvb_A            1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG   78 (347)
T ss_dssp             CEEEEECSTTSC--CEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEEC
T ss_pred             CeEEEEecCCCC--eEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEEC
Confidence            999999988754  889999999999999999999999999999999886542       23468899999999999999


Q ss_pred             CCCCCCCCCCEEEEEc---------------------------CCceeeeEEeecC-CceeeCCCCCCHHhhccCcchHH
Q 020487           74 KNVSRWKVGDQVCALL---------------------------GGGGYAEKVAVPA-GQVLPVPSGVSLKDAAAFPEVAC  125 (325)
Q Consensus        74 ~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~-~~~~~~p~~~~~~~aa~l~~~~~  125 (325)
                      +++++|++||+|++..                           .+|+|+||+++++ +.++++ +++++++++++++++.
T Consensus        79 ~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~  157 (347)
T 1jvb_A           79 DEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGI  157 (347)
T ss_dssp             TTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHH
T ss_pred             CCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHHHcccchhhHH
Confidence            9999999999997642                           3589999999999 999999 9999999999999999


Q ss_pred             HHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHh
Q 020487          126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET  204 (325)
Q Consensus       126 ~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  204 (325)
                      |||+++ ...++++|+++||+|++|++|++++|+++.. |++|+++++++++.+.++++|++.+++..+.++.+.+.+.+
T Consensus       158 ta~~~l-~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  236 (347)
T 1jvb_A          158 TTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRIT  236 (347)
T ss_dssp             HHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHT
T ss_pred             HHHHHH-HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHh
Confidence            999999 4588999999999999779999999999999 99999999999999999999999999988877777777777


Q ss_pred             CCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHH
Q 020487          205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV  283 (325)
Q Consensus       205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  283 (325)
                      ...++|++|||+|.. .+..++++++++|+++.+|...... .++...++.+++++.++....          .+.++++
T Consensus       237 ~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~----------~~~~~~~  305 (347)
T 1jvb_A          237 ESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGN----------QSDFLGI  305 (347)
T ss_dssp             TTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCC----------HHHHHHH
T ss_pred             cCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccC----------HHHHHHH
Confidence            523899999999987 6788899999999999998765223 667777788999999876532          1234558


Q ss_pred             HHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          284 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       284 ~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ++++.+|++++.++++|+++++++|++.+++++..||+|++|
T Consensus       306 ~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          306 MRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             HHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            999999999998899999999999999999988889999976

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=1.9e-52  Score=366.23  Aligned_cols=303  Identities=20%  Similarity=0.251  Sum_probs=248.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..  .++.+++++.+.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus         5 Mka~~~~~--~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~   81 (315)
T 3goh_A            5 HQVWAYQT--KTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPIN-WSNGHVPGVDGAGVIVKVGAKVDSKM   81 (315)
T ss_dssp             EEEEEEET--TTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTC-CCTTCCCCSEEEEEEEEECTTSCGGG
T ss_pred             eEEEEEeC--CCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCc-CCCCCEeeeeeEEEEEEeCCCCCCCC
Confidence            79999996  3455999999999999999999999999999999999988754 35689999999999999999999999


Q ss_pred             CCCEEEEEcC---CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHH
Q 020487           81 VGDQVCALLG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAI  157 (325)
Q Consensus        81 ~Gd~V~~~~~---~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~  157 (325)
                      +||+|++...   +|+|+||++++++.++++|+++++++||+++.+++|||+++ +.+++++|++|||+|+ |++|++++
T Consensus        82 vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~  159 (315)
T 3goh_A           82 LGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGF-GAVNNLLT  159 (315)
T ss_dssp             TTCEEEEECCTTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECC-SHHHHHHH
T ss_pred             CCCEEEEeCCCCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECC-CHHHHHHH
Confidence            9999999864   79999999999999999999999999999999999999999 8899999999999999 99999999


Q ss_pred             HHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEE
Q 020487          158 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       158 ~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~  237 (325)
                      |+|+..|++|++++ ++++++.++++|++++++  +   .+.+     ++++|++|||+|++.+..++++++++|+++.+
T Consensus       160 qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~--d---~~~v-----~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~  228 (315)
T 3goh_A          160 QMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYR--E---PSQV-----TQKYFAIFDAVNSQNAAALVPSLKANGHIICI  228 (315)
T ss_dssp             HHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEES--S---GGGC-----CSCEEEEECC-------TTGGGEEEEEEEEEE
T ss_pred             HHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEc--C---HHHh-----CCCccEEEECCCchhHHHHHHHhcCCCEEEEE
Confidence            99999999999999 999999999999998884  1   2222     56899999999998888889999999999999


Q ss_pred             eccCCcccccchHHHHhhccEeeeccccccc---chhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHh
Q 020487          238 GTQGGAKTELNITSLFAKRLTVQAAGLRSRS---TENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMES  314 (325)
Q Consensus       238 g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~  314 (325)
                      |.....    ...+.+.+.+.+....+....   .........+.++++++++.+|+++++++++|+++++++|++.++ 
T Consensus       229 g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~-  303 (315)
T 3goh_A          229 QDRIPA----PIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRFEQMIEALDHSE-  303 (315)
T ss_dssp             CCC--------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGHHHHHHHHH-
T ss_pred             eCCCCc----cccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcccccceEecHHHHHHHHHHHH-
Confidence            754321    111223344444444433221   111222455677889999999999999999999999999999998 


Q ss_pred             CCCceeEEEeC
Q 020487          315 SQHIGKIMLVP  325 (325)
Q Consensus       315 ~~~~gkvvi~~  325 (325)
                       +..||+|+++
T Consensus       304 -~~~gKvvi~~  313 (315)
T 3goh_A          304 -QTKLKTVLTL  313 (315)
T ss_dssp             -HHCCCEEEES
T ss_pred             -hcCCcEEEEe
Confidence             6668999875

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.3e-51  Score=365.76  Aligned_cols=310  Identities=23%  Similarity=0.287  Sum_probs=269.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhh-hhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTL-QRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~-~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      |||+++..++++  +++++.|.|+|.++||+|||.++|||++|++ .+.|..+  ..+|.++|||++|+|+++|+++++|
T Consensus         9 mka~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~--~~~P~v~GhE~~G~V~~vG~~V~~~   84 (374)
T 1cdo_A            9 CKAAVAWEANKP--LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK--DGFPVVLGHEGAGIVESVGPGVTEF   84 (374)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT--TSCSEECCCCEEEEEEEECTTCCSC
T ss_pred             eEEEEEecCCCC--eEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC--CCCCcccCccceEEEEEECCCCccC
Confidence            799999988754  8899999999999999999999999999999 8888765  3468899999999999999999999


Q ss_pred             CCCCEEEEEc------------------------------------------------CCceeeeEEeecCCceeeCCCC
Q 020487           80 KVGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSG  111 (325)
Q Consensus        80 ~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~  111 (325)
                      ++||+|+...                                                .+|+|+||++++++.++++|++
T Consensus        85 ~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~  164 (374)
T 1cdo_A           85 QPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPS  164 (374)
T ss_dssp             CTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTT
T ss_pred             CCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEECCCC
Confidence            9999998752                                                1389999999999999999999


Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEe
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN  190 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (325)
                      +++++|+++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++++++
T Consensus       165 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~  243 (374)
T 1cdo_A          165 APLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVN  243 (374)
T ss_dssp             CCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEEC
T ss_pred             CCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEe
Confidence            9999999999999999999888889999999999997 9999999999999999 8999999999999999999999998


Q ss_pred             CCC--chHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCC-CEEEEEeccCCcccccchHHHHhhccEeeeccccc
Q 020487          191 YKT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRS  266 (325)
Q Consensus       191 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~  266 (325)
                      +.+  .++.+.+.+.+++ ++|++|||+|. ..+..++++++++ |+++.+|........++...++.++ ++.++....
T Consensus       244 ~~~~~~~~~~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~i~g~~~~~  321 (374)
T 1cdo_A          244 PNDHSEPISQVLSKMTNG-GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGR-TWKGSMFGG  321 (374)
T ss_dssp             GGGCSSCHHHHHHHHHTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTC-EEEECSGGG
T ss_pred             ccccchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCC-eEEEEecCC
Confidence            764  4677788888876 89999999997 5678889999999 9999998765433446666677777 888876543


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          267 RSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ..       ..+.++++++++.+|+++  ++++++|+|+++++|++.+++++. +|+|++|
T Consensus       322 ~~-------~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          322 FK-------GKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             CC-------HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             CC-------cHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence            21       123455689999999986  567899999999999999988775 6999876

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=2.7e-51  Score=366.93  Aligned_cols=308  Identities=24%  Similarity=0.323  Sum_probs=267.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++++  +++++.|.|+|+++||+|||.++|||++|++.+.|..+  ..+|.++|||++|+|+++|+++++|+
T Consensus        10 mka~~~~~~g~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~~G~V~~vG~~v~~~~   85 (373)
T 1p0f_A           10 CKAAVAWEPHKP--LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP--SKFPVILGHEAVGVVESIGAGVTCVK   85 (373)
T ss_dssp             EEEEEBSSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             eEEEEEEcCCCC--eeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC--CCCCcccCcCceEEEEEECCCCCccC
Confidence            799999988754  88999999999999999999999999999999998765  34689999999999999999999999


Q ss_pred             CCCEEEEEc------------------------------------------------CCceeeeEEeecCCceeeCCCCC
Q 020487           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (325)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (325)
                      +||+|++..                                                .+|+|+||++++++.++++|+++
T Consensus        86 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l  165 (373)
T 1p0f_A           86 PGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKA  165 (373)
T ss_dssp             TTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTC
T ss_pred             CCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEEECCCCC
Confidence            999998752                                                13899999999999999999999


Q ss_pred             CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      +++ ||+++.++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+++++++
T Consensus       166 ~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~  243 (373)
T 1p0f_A          166 PLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNP  243 (373)
T ss_dssp             CGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             Chh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEec
Confidence            999 99999999999999888889999999999997 9999999999999999 89999999999999999999999987


Q ss_pred             CC--chHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCC-CEEEEEeccCC-cccccchHHHHhhccEeeeccccc
Q 020487          192 KT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRS  266 (325)
Q Consensus       192 ~~--~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~  266 (325)
                      .+  .++.+.+.+.+++ ++|++|||+|. ..+..++++++++ |+++.+|.... ....++...++.++ ++.++....
T Consensus       244 ~~~~~~~~~~i~~~t~g-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~  321 (373)
T 1p0f_A          244 KDYDKPIYEVICEKTNG-GVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGR-SLKGSVFGG  321 (373)
T ss_dssp             GGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTC-EEEECSGGG
T ss_pred             ccccchHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCc-eEEeeccCC
Confidence            64  5677888888876 89999999997 5678899999999 99999987653 23445666666677 888876543


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          267 RSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ...        +.++++++++.+|+++  ++++++|+|+++++|++.+++++. +|+|++|
T Consensus       322 ~~~--------~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          322 FKG--------EEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             CCG--------GGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             cCH--------HHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            221        1234488999999976  567899999999999999987765 6999876

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.3e-51  Score=363.90  Aligned_cols=310  Identities=23%  Similarity=0.402  Sum_probs=272.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++.+  +++++.|.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus         6 mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   83 (347)
T 2hcy_A            6 QKGVIFYESHGK--LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWK   83 (347)
T ss_dssp             EEEEEESSTTCC--CEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCSCC
T ss_pred             cEEEEEeCCCCC--CEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCCCc
Confidence            899999988854  889999999999999999999999999999999997764445688999999999999999999999


Q ss_pred             CCCEEEEE-----c-----------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487           81 VGDQVCAL-----L-----------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (325)
Q Consensus        81 ~Gd~V~~~-----~-----------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~  132 (325)
                      +||+|+..     |                       .+|+|+||++++++.++++|+++++++|++++.+++|||+++.
T Consensus        84 ~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~  163 (347)
T 2hcy_A           84 IGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALK  163 (347)
T ss_dssp             TTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHHHHHHH
T ss_pred             CCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHHHHHHH
Confidence            99999852     1                       2589999999999999999999999999999999999999995


Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCC-CchHHHHHHHHhCCCcccE
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK-TEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~d~  211 (325)
                       ..++++|+++||+|++|++|++++++++..|++|+++++++++.+.++++|++.++|.. ..++.+.+.+.+.+ ++|+
T Consensus       164 -~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~-~~D~  241 (347)
T 2hcy_A          164 -SANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDG-GAHG  241 (347)
T ss_dssp             -TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTS-CEEE
T ss_pred             -hcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCC-CCCE
Confidence             45899999999999999999999999999999999999999999999999999888876 56677778887776 8999


Q ss_pred             EEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCC
Q 020487          212 ILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG  290 (325)
Q Consensus       212 vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  290 (325)
                      +||++|. ..+..+++.|+++|+++.+|...+....++...++.+++++.++.....          +.++++++++.+|
T Consensus       242 vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~l~~~g  311 (347)
T 2hcy_A          242 VINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNR----------ADTREALDFFARG  311 (347)
T ss_dssp             EEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCH----------HHHHHHHHHHHTT
T ss_pred             EEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCH----------HHHHHHHHHHHhC
Confidence            9999997 5678889999999999999876644445667777889999998754321          2344588999999


Q ss_pred             ccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          291 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       291 ~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ++++. +++|+++++++|++.+++++..||+|+++
T Consensus       312 ~l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  345 (347)
T 2hcy_A          312 LVKSP-IKVVGLSTLPEIYEKMEKGQIVGRYVVDT  345 (347)
T ss_dssp             SCCCC-EEEEEGGGHHHHHHHHHTTCCSSEEEEES
T ss_pred             CCccc-eEEEcHHHHHHHHHHHHcCCcceeEEEec
Confidence            99876 47899999999999999888889999875

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=4.7e-51  Score=365.81  Aligned_cols=309  Identities=23%  Similarity=0.322  Sum_probs=267.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++.+  +++++.+.|+|+++||+|||.+++||++|++.+.|. +. ..+|.++|||++|+|+++|+++++|+
T Consensus         9 mka~~~~~~g~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~-~~~P~v~GhE~~G~V~~vG~~v~~~~   84 (376)
T 1e3i_A            9 CKAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KK-ALFPVVLGHECAGIVESVGPGVTNFK   84 (376)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SC-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             eeEEEEecCCCC--eEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CC-CCCCcccCccccEEEEEECCCCccCC
Confidence            799999988754  889999999999999999999999999999999886 32 34688999999999999999999999


Q ss_pred             CCCEEEEEc----------------------------------------------------CCceeeeEEeecCCceeeC
Q 020487           81 VGDQVCALL----------------------------------------------------GGGGYAEKVAVPAGQVLPV  108 (325)
Q Consensus        81 ~Gd~V~~~~----------------------------------------------------~~g~~~~~~~~~~~~~~~~  108 (325)
                      +||+|+...                                                    .+|+|+||++++++.++++
T Consensus        85 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i  164 (376)
T 1e3i_A           85 PGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARV  164 (376)
T ss_dssp             TTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred             CCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccccEEEC
Confidence            999998742                                                    1389999999999999999


Q ss_pred             CCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCE
Q 020487          109 PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADV  187 (325)
Q Consensus       109 p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~  187 (325)
                      |+++++++|+++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+++
T Consensus       165 P~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~  243 (376)
T 1e3i_A          165 DDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATD  243 (376)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSE
T ss_pred             CCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcE
Confidence            9999999999999999999999888889999999999997 9999999999999999 8999999999999999999999


Q ss_pred             EEeCCC--chHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCC-CEEEEEeccCCcccccchHHHHhhccEeeecc
Q 020487          188 CINYKT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGGAKTELNITSLFAKRLTVQAAG  263 (325)
Q Consensus       188 ~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~  263 (325)
                      ++++.+  .++.+.+.+.+++ ++|++|||+|. ..+..++++++++ |+++.+|.. .....++...++.++ ++.++.
T Consensus       244 vi~~~~~~~~~~~~v~~~~~~-g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~-~~~~~~~~~~~~~~~-~i~g~~  320 (376)
T 1e3i_A          244 CLNPRELDKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK-VDEMTIPTVDVILGR-SINGTF  320 (376)
T ss_dssp             EECGGGCSSCHHHHHHHHHTS-CBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCS-SSEEEEEHHHHHTTC-EEEECS
T ss_pred             EEccccccchHHHHHHHHhCC-CccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCC-CCccccCHHHhhccC-eEEEEe
Confidence            998774  5677788888876 89999999997 5678899999999 999999873 333456666777777 888876


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          264 LRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      .....       ..+.++++++++.+|+++  ++++++|+|+++++|++.+++++. +|+|+++
T Consensus       321 ~~~~~-------~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  376 (376)
T 1e3i_A          321 FGGWK-------SVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKS-IRTILTF  376 (376)
T ss_dssp             GGGCC-------HHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             cCCCC-------cHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCc-ceEEEeC
Confidence            54321       123455689999999976  567899999999999999988774 7999875

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=8.6e-51  Score=363.84  Aligned_cols=310  Identities=24%  Similarity=0.337  Sum_probs=268.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++++  +++++.+.|+|+++||+|||.++|||++|++.+.|..+..  +|.++|||++|+|+++|+++++|+
T Consensus         9 mkA~~~~~~g~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~P~v~GhE~~G~V~~vG~~v~~~~   84 (374)
T 2jhf_A            9 CKAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP--LPVIAGHEAAGIVESIGEGVTTVR   84 (374)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC--SSBCCCCSEEEEEEEECTTCCSCC
T ss_pred             EEEEEEecCCCc--eEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCCC--CCcccCcCceEEEEEECCCCCCCC
Confidence            799999988754  8899999999999999999999999999999999976542  689999999999999999999999


Q ss_pred             CCCEEEEEc------------------------------------------------CCceeeeEEeecCCceeeCCCCC
Q 020487           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (325)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (325)
                      +||+|+...                                                .+|+|+||++++++.++++|+++
T Consensus        85 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l  164 (374)
T 2jhf_A           85 PGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAS  164 (374)
T ss_dssp             TTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTC
T ss_pred             CCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECCCCC
Confidence            999998752                                                13899999999999999999999


Q ss_pred             CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      ++++|+++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+++++++
T Consensus       165 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~  243 (374)
T 2jhf_A          165 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP  243 (374)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecc
Confidence            999999999999999999888889999999999996 9999999999999999 89999999999999999999999987


Q ss_pred             CC--chHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCC-CEEEEEeccCC-cccccchHHHHhhccEeeeccccc
Q 020487          192 KT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRS  266 (325)
Q Consensus       192 ~~--~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~  266 (325)
                      .+  .++.+.+.+.+++ ++|++|||+|. ..+..++++++++ |+++.+|.... ....++...++.++ ++.++....
T Consensus       244 ~~~~~~~~~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~  321 (374)
T 2jhf_A          244 QDYKKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAIFGG  321 (374)
T ss_dssp             GGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGG
T ss_pred             cccchhHHHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCC-eEEEeccCC
Confidence            64  4577778888776 89999999997 5678889999999 99999987653 23445666677777 888876543


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          267 RSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ..   .    .+.++++++++.+|+++  ++++++|+|+++++|++.+.+++. +|+|++|
T Consensus       322 ~~---~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          322 FK---S----KDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             CC---H----HHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             CC---h----HHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            21   1    23455689999999986  467899999999999999988775 6999875

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=7.7e-51  Score=364.15  Aligned_cols=311  Identities=25%  Similarity=0.334  Sum_probs=269.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++++  +++++.+.|+|+++||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|+++++|+
T Consensus         7 mkA~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~V~~~~   83 (373)
T 2fzw_A            7 CKAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPE-GCFPVILGHLGAGIVESVGEGVTKLK   83 (373)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTT-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             eEEEEEecCCCC--cEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCC-CCCCccccccccEEEEEECCCCCCCC
Confidence            799999988754  889999999999999999999999999999999997653 24688999999999999999999999


Q ss_pred             CCCEEEEEc------------------------------------------------CCceeeeEEeecCCceeeCCCCC
Q 020487           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (325)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (325)
                      +||+|++..                                                .+|+|+||++++++.++++|+++
T Consensus        84 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l  163 (373)
T 2fzw_A           84 AGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLA  163 (373)
T ss_dssp             TTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEECCCCC
Confidence            999998752                                                13899999999999999999999


Q ss_pred             CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      ++++|+++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+++++++
T Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~  242 (373)
T 2fzw_A          164 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP  242 (373)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred             CHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecc
Confidence            999999999999999999888889999999999997 9999999999999999 89999999999999999999999987


Q ss_pred             CC--chHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCC-CEEEEEeccCC-cccccchHHHHhhccEeeeccccc
Q 020487          192 KT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRS  266 (325)
Q Consensus       192 ~~--~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~  266 (325)
                      .+  .++.+.+.+.+++ ++|++|||+|. ..+..++++++++ |+++.+|.... ....++...++.++ ++.++....
T Consensus       243 ~~~~~~~~~~v~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~  320 (373)
T 2fzw_A          243 QDFSKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTAFGG  320 (373)
T ss_dssp             GGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGG
T ss_pred             ccccccHHHHHHHHhCC-CCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEeccCC
Confidence            64  5677788888876 89999999997 5678889999999 99999987653 23345666666677 888876543


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          267 RSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ..   .    .+.++++++++.+|+++  ++++++|+|+++++|++.+++++. +|+|++|
T Consensus       321 ~~---~----~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          321 WK---S----VESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             CC---H----HHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             CC---c----HHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            21   1    23455689999999986  567899999999999999988775 6999875

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2e-51  Score=368.28  Aligned_cols=307  Identities=23%  Similarity=0.323  Sum_probs=269.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCC---
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS---   77 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~---   77 (325)
                      |||+++..++  +.+++++.|.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++| +++   
T Consensus        18 mka~~~~~~g--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~P~v~GhE~~G~V~~vG-~V~~~~   93 (380)
T 1vj0_A           18 AHAMVLEKFN--QPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPR-VPLPIILGHEGAGRVVEVN-GEKRDL   93 (380)
T ss_dssp             EEEEEBCSTT--SCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTT-CCSSBCCCCEEEEEEEEES-SCCBCT
T ss_pred             eEEEEEecCC--CCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCC-CCCCcccCcCcEEEEEEeC-Cccccc
Confidence            7999999988  34899999999999999999999999999999999997652 2468899999999999999 998   


Q ss_pred             ---CCCCCCEEEEE------------------------------------cCCceeeeEEee-cCCceeeCCCCCCHH-h
Q 020487           78 ---RWKVGDQVCAL------------------------------------LGGGGYAEKVAV-PAGQVLPVPSGVSLK-D  116 (325)
Q Consensus        78 ---~~~~Gd~V~~~------------------------------------~~~g~~~~~~~~-~~~~~~~~p~~~~~~-~  116 (325)
                         .|++||+|++.                                    ..+|+|+||+++ +++.++++|++++++ +
T Consensus        94 ~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l~~~~~  173 (380)
T 1vj0_A           94 NGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVL  173 (380)
T ss_dssp             TSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTSCHHHH
T ss_pred             cCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEECCCCCChHHh
Confidence               99999999974                                    125999999999 999999999999999 6


Q ss_pred             hccCcchHHHHHHHHHhhcC-CCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHHHcCCCEEEeCC--
Q 020487          117 AAAFPEVACTVWSTVFMTSH-LSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYK--  192 (325)
Q Consensus       117 aa~l~~~~~~a~~~l~~~~~-~~~~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~--  192 (325)
                      |+.+. +++|||+++ +..+ +++|++|||+| +|++|++++|+|+.+| ++|+++++++++++.++++|+++++++.  
T Consensus       174 Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~  250 (380)
T 1vj0_A          174 AMAMC-SGATAYHAF-DEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRET  250 (380)
T ss_dssp             HHHTT-HHHHHHHHH-HTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTS
T ss_pred             Hhhhc-HHHHHHHHH-HhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEecccc
Confidence            66555 999999999 6678 99999999999 5999999999999999 5999999999999999999999999987  


Q ss_pred             -CchHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccC-CcccccchHH-HHhhccEeeeccccccc
Q 020487          193 -TEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQG-GAKTELNITS-LFAKRLTVQAAGLRSRS  268 (325)
Q Consensus       193 -~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~-~~~~~~~i~~~~~~~~~  268 (325)
                       ..++.+.+++.+++.++|++|||+|. ..+..++++++++|+++.+|... .....++... ++.+++++.++....  
T Consensus       251 ~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~--  328 (380)
T 1vj0_A          251 SVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD--  328 (380)
T ss_dssp             CHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC--
T ss_pred             CcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEEEEeecCC--
Confidence             66777888888887789999999997 46788999999999999999766 4244566666 778999999976542  


Q ss_pred             chhHHHHHHHHHHHHHHHHHC--CccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          269 TENKALIVSEVEKNVWPAIAV--GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~--g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                              .+.++++++++.+  |+++++++++|+|+++++|++.+++++.. |+|++|
T Consensus       329 --------~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~  378 (380)
T 1vj0_A          329 --------TSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYP  378 (380)
T ss_dssp             --------HHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEEC
T ss_pred             --------HHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEe
Confidence                    1345558999999  99988889999999999999999988888 999875

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=3.3e-52  Score=381.80  Aligned_cols=315  Identities=23%  Similarity=0.372  Sum_probs=272.8

Q ss_pred             CEEEEEcCCC-------------CCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCC---------------
Q 020487            1 MKAIVITQPG-------------SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP---------------   52 (325)
Q Consensus         1 m~a~~~~~~~-------------~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~---------------   52 (325)
                      |||+++..++             ....+++++.|.|+|+++||+|||.++|||++|++...+...               
T Consensus        31 mkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g~~~~~  110 (456)
T 3krt_A           31 YRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDL  110 (456)
T ss_dssp             EEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHHTSCHH
T ss_pred             eEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhccccccc
Confidence            7999999762             124689999999999999999999999999999876533210               


Q ss_pred             -CCCCCC-CCCCCceeEEEEEecCCCCCCCCCCEEEEEcC---------------------------CceeeeEEeecCC
Q 020487           53 -PPKGAS-PYPGLECSGTILSVGKNVSRWKVGDQVCALLG---------------------------GGGYAEKVAVPAG  103 (325)
Q Consensus        53 -~~~~~p-~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~---------------------------~g~~~~~~~~~~~  103 (325)
                       ....+| .++|||++|+|+++|+++++|++||+|++.+.                           +|+|+||++++++
T Consensus       111 ~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~  190 (456)
T 3krt_A          111 AKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSN  190 (456)
T ss_dssp             HHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSEEEEEGG
T ss_pred             cccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCcccceEEechH
Confidence             112346 58999999999999999999999999998541                           4999999999999


Q ss_pred             ceeeCCCCCCHHhhccCcchHHHHHHHHHhh--cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH
Q 020487          104 QVLPVPSGVSLKDAAAFPEVACTVWSTVFMT--SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  181 (325)
Q Consensus       104 ~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~--~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~  181 (325)
                      .++++|+++++++||+++..++|||+++...  +++++|++|||+|++|++|++++|+|+..|++|+++++++++++.++
T Consensus       191 ~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~  270 (456)
T 3krt_A          191 QLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR  270 (456)
T ss_dssp             GEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             HeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            9999999999999999999999999998654  78999999999999999999999999999999999999999999999


Q ss_pred             HcCCCEEEeCCCch-----------------HHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcc
Q 020487          182 DLGADVCINYKTED-----------------FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAK  244 (325)
Q Consensus       182 ~~g~~~~~~~~~~~-----------------~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~  244 (325)
                      ++|++.++++...+                 +.+.+++.+++.++|++|||+|...+..++++++++|+++.+|...+..
T Consensus       271 ~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~  350 (456)
T 3krt_A          271 AMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSGYM  350 (456)
T ss_dssp             HHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEEEEEEESCCTTCSE
T ss_pred             hhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCCcEEEEEecCCCcc
Confidence            99999999877643                 3477888888889999999999988899999999999999999876655


Q ss_pred             cccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487          245 TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  324 (325)
Q Consensus       245 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  324 (325)
                      ..++...++.+++++.|+......          .+..+++++.+|++++.++++|+|+++++|++.+.+++..||+|+.
T Consensus       351 ~~~~~~~~~~~~~~i~g~~~~~~~----------~~~~~~~l~~~g~l~~~i~~~~~l~~~~eA~~~l~~~~~~GKvvv~  420 (456)
T 3krt_A          351 HEYDNRYLWMSLKRIIGSHFANYR----------EAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGVL  420 (456)
T ss_dssp             EEEEHHHHHHTTCEEEECCSCCHH----------HHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEE
T ss_pred             cccCHHHHHhcCeEEEEeccCCHH----------HHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHHhCCCCCcEEEE
Confidence            567777788889999988664331          1223789999999999999999999999999999999999999886


Q ss_pred             C
Q 020487          325 P  325 (325)
Q Consensus       325 ~  325 (325)
                      +
T Consensus       421 ~  421 (456)
T 3krt_A          421 C  421 (456)
T ss_dssp             S
T ss_pred             e
Confidence            4

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=2e-51  Score=364.41  Aligned_cols=308  Identities=30%  Similarity=0.402  Sum_probs=268.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhC-CCC-CCCCCCCCCCCceeEEEEEecCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG-SYP-PPKGASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g-~~~-~~~~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      |||+++..++.  .+++++.|.|+|+++||+|||.++|||++|++.+.| .++ ....+|.++|||++|+|+++|+++++
T Consensus         5 mka~~~~~~g~--~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   82 (348)
T 2d8a_A            5 MVAIMKTKPGY--GAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEG   82 (348)
T ss_dssp             EEEEEECSSSS--SCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCCS
T ss_pred             ceEEEEECCCC--CEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCCc
Confidence            79999998874  489999999999999999999999999999999998 432 11245889999999999999999999


Q ss_pred             CCCCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHH
Q 020487           79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (325)
Q Consensus        79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l  131 (325)
                      |++||+|++..                           .+|+|+||++++++.++++|+++++++|+++ .++.+||+++
T Consensus        83 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~l  161 (348)
T 2d8a_A           83 IEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQ-EPLGNAVDTV  161 (348)
T ss_dssp             CCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTH-HHHHHHHHHH
T ss_pred             CCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhh-hHHHHHHHHH
Confidence            99999998752                           3599999999999999999999999999877 4788999999


Q ss_pred             HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487          132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                       +..++ +|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++++++++..++.+.+.+.+++.++|
T Consensus       162 -~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D  238 (348)
T 2d8a_A          162 -LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVD  238 (348)
T ss_dssp             -TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEE
T ss_pred             -HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCC
Confidence             77888 9999999999 9999999999999999 999999999999999999999999988888888888888888899


Q ss_pred             EEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccch-HHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHH
Q 020487          211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNI-TSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA  288 (325)
Q Consensus       211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (325)
                      ++|||+|. ..+..++++++++|+++.+|.... ...++. ..++.+++++.++.....         .+.++++++++.
T Consensus       239 ~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~---------~~~~~~~~~l~~  308 (348)
T 2d8a_A          239 VFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPG-KVTIDFNNLIIFKALTIYGITGRHL---------WETWYTVSRLLQ  308 (348)
T ss_dssp             EEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS-CCCCCHHHHTTTTTCEEEECCCCCS---------HHHHHHHHHHHH
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC-CcccCchHHHHhCCcEEEEecCCCc---------HHHHHHHHHHHH
Confidence            99999997 567888999999999999987654 345666 667788999998754321         123455899999


Q ss_pred             CCcc--ccccccccc-hhhHHHHHHHHHhCCCceeEEEeC
Q 020487          289 VGKV--KPVIYKYLP-LCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       289 ~g~l--~~~~~~~~~-l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +|++  +++++++|+ ++++++|++.+++ +..+|+|+++
T Consensus       309 ~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~  347 (348)
T 2d8a_A          309 SGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFML  347 (348)
T ss_dssp             HTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC
T ss_pred             cCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEee
Confidence            9995  567789999 9999999999977 5678999875

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=8.6e-52  Score=369.18  Aligned_cols=305  Identities=22%  Similarity=0.360  Sum_probs=269.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++.   +++++.|.|+|+++||+|||.++|||++|++.+.|.++.  .+|.++|||++|+|+++|+++++|+
T Consensus        24 mkA~v~~~~~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~p~v~G~e~~G~V~~vG~~v~~~~   98 (370)
T 4ej6_A           24 MKAVRLESVGN---ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPS--TPPVTLGHEFCGIVVEAGSAVRDIA   98 (370)
T ss_dssp             EEEEEEEETTE---EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSCC--CSSEECCCSEEEEEEEECTTCCSSC
T ss_pred             eEEEEEecCCc---eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCCC--CCCeecCcceEEEEEEECCCCCCCC
Confidence            89999998764   999999999999999999999999999999999998743  4588999999999999999999999


Q ss_pred             CCCEEEEE---------------------------cCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487           81 VGDQVCAL---------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (325)
Q Consensus        81 ~Gd~V~~~---------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~  133 (325)
                      +||+|++.                           ..+|+|+||++++++.++++|+++++++|+ +..++.+||+++ +
T Consensus        99 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~ta~~~l-~  176 (370)
T 4ej6_A           99 PGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLACCLHGV-D  176 (370)
T ss_dssp             TTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHHHHHHHH-H
T ss_pred             CCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHHHHHHHHH-H
Confidence            99999863                           236999999999999999999999999997 778999999998 7


Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHH---HhCCCcc
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE---ETGGKGV  209 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~  209 (325)
                      .+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.+++++..++.+.+.+   .+++ ++
T Consensus       177 ~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~g-g~  254 (370)
T 4ej6_A          177 LSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPG-GV  254 (370)
T ss_dssp             HHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTT-CE
T ss_pred             hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCC-CC
Confidence            889999999999998 9999999999999999 8999999999999999999999999988888888887   6666 89


Q ss_pred             cEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCc-ccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHH
Q 020487          210 DVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI  287 (325)
Q Consensus       210 d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (325)
                      |++|||+|. ..+..++++++++|+++.+|..... ...++...++.+++++.|+......           ++++++++
T Consensus       255 Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----------~~~~~~l~  323 (370)
T 4ej6_A          255 DVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFV-----------HRRAADLV  323 (370)
T ss_dssp             EEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCTTC-----------HHHHHHHH
T ss_pred             CEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccChHH-----------HHHHHHHH
Confidence            999999995 5678999999999999999876642 4567788888999999998764321           23488999


Q ss_pred             HCCcc--ccccccccchhhHHHHHHHHHhCC-CceeEEEeC
Q 020487          288 AVGKV--KPVIYKYLPLCEAAEAHQLMESSQ-HIGKIMLVP  325 (325)
Q Consensus       288 ~~g~l--~~~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi~~  325 (325)
                      .+|++  .++++++|+|+++++|++.+.+++ ..+|++++|
T Consensus       324 ~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~  364 (370)
T 4ej6_A          324 ATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSA  364 (370)
T ss_dssp             HTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC-
T ss_pred             HcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcc
Confidence            99998  456899999999999999998776 457888765

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=1.4e-50  Score=361.67  Aligned_cols=313  Identities=19%  Similarity=0.262  Sum_probs=262.8

Q ss_pred             CEEEEEcCCCCCcceEEE-eecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~-~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      |||+++..++.   ++++ +.+.|+|+++||+|||.+++||++|++.+.+..    .+|.++|||++|+|+++|+++++|
T Consensus        12 mkA~v~~~~~~---l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~----~~p~v~G~e~~G~V~~vG~~v~~~   84 (371)
T 3gqv_A           12 QTALTVNDHDE---VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFA----TPWAFLGTDYAGTVVAVGSDVTHI   84 (371)
T ss_dssp             EEEEEECTTSC---EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC-----C----CTTSCCCSEEEEEEEEECTTCCSC
T ss_pred             ceeEEEcCCCc---eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcCC----CCCccCccccEEEEEEeCCCCCCC
Confidence            79999998765   9998 999999999999999999999999999887632    248899999999999999999999


Q ss_pred             CCCCEEEEEc--------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhh-cCC-----------CC
Q 020487           80 KVGDQVCALL--------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT-SHL-----------SP  139 (325)
Q Consensus        80 ~~Gd~V~~~~--------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~-~~~-----------~~  139 (325)
                      ++||+|++.+        .+|+|+||++++++.++++|+++++++|++++.+++|||+++.+. .++           ++
T Consensus        85 ~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~  164 (371)
T 3gqv_A           85 QVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSK  164 (371)
T ss_dssp             CTTCEEEEECCTTCTTCTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSS
T ss_pred             CCCCEEEEeccCCCCCCCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCC
Confidence            9999999987        369999999999999999999999999999999999999999776 553           89


Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      |++|||+|++|++|++++|+|+..|++|++++ ++++++.++++|+++++++...++.+.+++.++++ +|++|||+|+.
T Consensus       165 g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~-~d~v~d~~g~~  242 (371)
T 3gqv_A          165 PVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNN-LRYALDCITNV  242 (371)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTC-CCEEEESSCSH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCC-ccEEEECCCch
Confidence            99999999999999999999999999999987 88999999999999999999999999999998874 99999999984


Q ss_pred             -HHHHhhccc-cCCCEEEEEeccCCc-----ccc---cchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHC
Q 020487          220 -YFQRNLGSL-NIDGRLFIIGTQGGA-----KTE---LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV  289 (325)
Q Consensus       220 -~~~~~~~~l-~~~g~~v~~g~~~~~-----~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (325)
                       .+..+++++ +++|+++.+|.....     ...   .....++.+++++.++....... .......+.++.+++++.+
T Consensus       243 ~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~l~~~  321 (371)
T 3gqv_A          243 ESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSE-EERQFGEDLWRIAGQLVED  321 (371)
T ss_dssp             HHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCH-HHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccccccccccH-HHHHHHHHHHHHHHHHHHC
Confidence             578889999 599999999864431     111   11234666888888875443322 2223455666678999999


Q ss_pred             Ccccccc--ccccchhhHHHHHHHHHhCCCceeEEE
Q 020487          290 GKVKPVI--YKYLPLCEAAEAHQLMESSQHIGKIML  323 (325)
Q Consensus       290 g~l~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvvi  323 (325)
                      |++++.+  +..|+|+++++|++.+.+++..||.|+
T Consensus       322 g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvv  357 (371)
T 3gqv_A          322 GRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLV  357 (371)
T ss_dssp             TSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEE
T ss_pred             CeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEE
Confidence            9988754  556999999999999999998886443

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=2.8e-51  Score=364.05  Aligned_cols=309  Identities=19%  Similarity=0.268  Sum_probs=267.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhh-hhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTL-QRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~-~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      |||+++..+++   +++++.|.|+|+++||+|||.+++||++|++ ...|..+.  .+|.++|||++|+|+++|+++++|
T Consensus         1 MkA~~~~~~~~---~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~--~~p~v~G~E~~G~V~~vG~~v~~~   75 (352)
T 3fpc_A            1 MKGFAMLSIGK---VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGE--RHNMILGHEAVGEVVEVGSEVKDF   75 (352)
T ss_dssp             CEEEEEEETTE---EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTCC--CSSEECCCEEEEEEEEECTTCCSC
T ss_pred             CeEEEEccCCC---ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCCC--CCCcccCCcceEEEEEECCCCCcC
Confidence            99999998876   8899999999999999999999999999999 55787654  358899999999999999999999


Q ss_pred             CCCCEEEEEc------------------------------CCceeeeEEeecCC--ceeeCCCCCCHHhhccCcchHHHH
Q 020487           80 KVGDQVCALL------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTV  127 (325)
Q Consensus        80 ~~Gd~V~~~~------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~a  127 (325)
                      ++||+|+...                              .+|+|+||+++++.  .++++|+++++++|++++.+++||
T Consensus        76 ~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ta  155 (352)
T 3fpc_A           76 KPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTG  155 (352)
T ss_dssp             CTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHHH
T ss_pred             CCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHHH
Confidence            9999998631                              46999999999976  899999999999999999999999


Q ss_pred             HHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCC
Q 020487          128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       128 ~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  206 (325)
                      |+++ +.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++++++++..++.+.+++.+++
T Consensus       156 ~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g  233 (352)
T 3fpc_A          156 FHGA-ELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDG  233 (352)
T ss_dssp             HHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTT
T ss_pred             HHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCC
Confidence            9998 7889999999999997 9999999999999999 89999999999999999999999999888899999999998


Q ss_pred             CcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCc-ccccchHH--HHhhccEeeecccccccchhHHHHHHHHHHH
Q 020487          207 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITS--LFAKRLTVQAAGLRSRSTENKALIVSEVEKN  282 (325)
Q Consensus       207 ~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  282 (325)
                      +++|++|||+|. ..+..++++++++|+++.+|..... ..+++...  +..+++++.++.....         .+.+++
T Consensus       234 ~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---------~~~~~~  304 (352)
T 3fpc_A          234 KGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGG---------RLRMER  304 (352)
T ss_dssp             CCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCH---------HHHHHH
T ss_pred             CCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCc---------hhHHHH
Confidence            899999999998 5688999999999999999876532 12222211  2236777877644211         123455


Q ss_pred             HHHHHHCCcccc--ccccccc-hhhHHHHHHHHHhCCCc-eeEEEeC
Q 020487          283 VWPAIAVGKVKP--VIYKYLP-LCEAAEAHQLMESSQHI-GKIMLVP  325 (325)
Q Consensus       283 ~~~~~~~g~l~~--~~~~~~~-l~~~~~a~~~~~~~~~~-gkvvi~~  325 (325)
                      +++++.+|++++  +++++|+ |+++++|++.+++++.. +|+|+++
T Consensus       305 ~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~  351 (352)
T 3fpc_A          305 LIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVIL  351 (352)
T ss_dssp             HHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEEC
T ss_pred             HHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            899999999876  4789999 99999999999886554 8999875

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=1.6e-51  Score=365.01  Aligned_cols=299  Identities=18%  Similarity=0.234  Sum_probs=261.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++++  +++++.+.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus         5 mka~~~~~~~~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~V~~vG~~v~~~~   81 (348)
T 3two_A            5 SKGFAIFSKDEH--FKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKE-GIYPMIPGHEIAGIIKEVGKGVKKFK   81 (348)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSC-CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             EEEEEEccCCCC--CeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCC-CCCCeecCcceeEEEEEECCCCCCCC
Confidence            799999987654  999999999999999999999999999999999998764 34689999999999999999999999


Q ss_pred             CCCEEEEEc-------------------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcch
Q 020487           81 VGDQVCALL-------------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEV  123 (325)
Q Consensus        81 ~Gd~V~~~~-------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~  123 (325)
                      +||+|+...                                     .+|+|+||++++++.++++|+++++++||+++++
T Consensus        82 vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  161 (348)
T 3two_A           82 IGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCA  161 (348)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTH
T ss_pred             CCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhhhhh
Confidence            999997521                                     1299999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHH
Q 020487          124 ACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE  203 (325)
Q Consensus       124 ~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  203 (325)
                      +.|||+++. ..++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++++|+++++ .+...+       
T Consensus       162 ~~ta~~~l~-~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~~~~~-------  231 (348)
T 3two_A          162 GITTYSPLK-FSKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY-TDPKQC-------  231 (348)
T ss_dssp             HHHHHHHHH-HTTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE-SSGGGC-------
T ss_pred             HHHHHHHHH-hcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec-CCHHHH-------
Confidence            999999994 569999999999998 9999999999999999999999999999999999999988 322211       


Q ss_pred             hCCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccC-CcccccchHHHH-hhccEeeecccccccchhHHHHHHHHH
Q 020487          204 TGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQG-GAKTELNITSLF-AKRLTVQAAGLRSRSTENKALIVSEVE  280 (325)
Q Consensus       204 ~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~  280 (325)
                       . +++|++|||+|.. .+..++++++++|+++.+|... .....++...++ .+++++.++.....          +.+
T Consensus       232 -~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----------~~~  299 (348)
T 3two_A          232 -K-EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGI----------KET  299 (348)
T ss_dssp             -C-SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCH----------HHH
T ss_pred             -h-cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCH----------HHH
Confidence             1 1799999999988 7899999999999999998766 332226667777 89999999876533          124


Q ss_pred             HHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          281 KNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       281 ~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +.+++++.+|++++.+ ++|+++++++|++.+.+++..||+|+++
T Consensus       300 ~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~  343 (348)
T 3two_A          300 QEMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDM  343 (348)
T ss_dssp             HHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEG
T ss_pred             HHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEec
Confidence            4488999999998865 7999999999999999999999999975

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=1.4e-51  Score=364.78  Aligned_cols=307  Identities=28%  Similarity=0.366  Sum_probs=267.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC--CCCCCCCCCCceeEEEEEecCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      |||+++..++++  +++++.|.|+|+++||+|||.++|||++|++.+.|.++.  ...+|.++|||++|+|+++|+++++
T Consensus         1 Mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   78 (343)
T 2dq4_A            1 MRALAKLAPEEG--LTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRR   78 (343)
T ss_dssp             CEEEEECSSSSS--CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCS
T ss_pred             CeEEEEeCCCCc--EEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCc
Confidence            999999998865  889999999999999999999999999999999986541  1245889999999999999999999


Q ss_pred             CCCCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHH
Q 020487           79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (325)
Q Consensus        79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l  131 (325)
                      |++||+|++..                           .+|+|+||++++++.++++|+++++++|+++ .++.+||+++
T Consensus        79 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~l  157 (343)
T 2dq4_A           79 PQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EPFGNAVHTV  157 (343)
T ss_dssp             SCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HHHHHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hHHHHHHHHH
Confidence            99999999742                           4699999999999999999999999999876 5778999999


Q ss_pred             HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487          132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      .+..++ +|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++ ++++++++..++.+.+.+.+ +.++|
T Consensus       158 ~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~-~~g~D  233 (343)
T 2dq4_A          158 YAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVT-GSGVE  233 (343)
T ss_dssp             HSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHH-SSCEE
T ss_pred             HHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhc-CCCCC
Confidence            657888 9999999999 9999999999999999 999999999999999999 99999988888888888888 66899


Q ss_pred             EEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccch-HHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHH
Q 020487          211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNI-TSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA  288 (325)
Q Consensus       211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (325)
                      ++|||+|. ..+..++++++++|+++.+|.... ...++. ..++.+++++.|+.....         .+.++++++++.
T Consensus       234 ~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~---------~~~~~~~~~l~~  303 (343)
T 2dq4_A          234 VLLEFSGNEAAIHQGLMALIPGGEARILGIPSD-PIRFDLAGELVMRGITAFGIAGRRL---------WQTWMQGTALVY  303 (343)
T ss_dssp             EEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS-CEEECHHHHTGGGTCEEEECCSCCT---------THHHHHHHHHHH
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-CceeCcHHHHHhCceEEEEeecCCC---------HHHHHHHHHHHH
Confidence            99999998 567889999999999999987543 345666 677789999998754311         123445889999


Q ss_pred             CCc--cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          289 VGK--VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       289 ~g~--l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +|+  ++++++++|+++++++|++.+++++. +|+|++|
T Consensus       304 ~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~  341 (343)
T 2dq4_A          304 SGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDP  341 (343)
T ss_dssp             HTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEET
T ss_pred             cCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEee
Confidence            999  56778899999999999999998877 9999875

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=2.2e-50  Score=359.26  Aligned_cols=316  Identities=28%  Similarity=0.391  Sum_probs=271.9

Q ss_pred             CEEEEEcCCCCC--cceEE-EeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCC
Q 020487            1 MKAIVITQPGSP--EVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS   77 (325)
Q Consensus         1 m~a~~~~~~~~~--~~l~~-~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~   77 (325)
                      |||+++..++.+  +.+++ ++.|.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|++++
T Consensus        24 MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG~~V~  103 (362)
T 2c0c_A           24 MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSAS  103 (362)
T ss_dssp             EEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEECTTGG
T ss_pred             ceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEECCCcc
Confidence            899999998763  56899 999999999999999999999999999999997754445688999999999999999999


Q ss_pred             -CCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHH
Q 020487           78 -RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFA  156 (325)
Q Consensus        78 -~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~  156 (325)
                       .|++||+|++.. +|+|+||++++++.++++|+. + .++++++.+++|||+++.+.+++++|++|||+|++|++|+++
T Consensus       104 ~~~~vGdrV~~~~-~G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~  180 (362)
T 2c0c_A          104 ARYTVGQAVAYMA-PGSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFA  180 (362)
T ss_dssp             GTCCTTCEEEEEC-SCCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHH
T ss_pred             CCCCCCCEEEEcc-CCcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHH
Confidence             999999999875 599999999999999999986 4 456778999999999998888999999999999889999999


Q ss_pred             HHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEE
Q 020487          157 IQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI  236 (325)
Q Consensus       157 ~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~  236 (325)
                      +|+++..|++|+++++++++++.++++|++.+++++..++.+.+.+.++ .++|++|||+|...+..++++++++|+++.
T Consensus       181 ~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~-~g~D~vid~~g~~~~~~~~~~l~~~G~iv~  259 (362)
T 2c0c_A          181 MQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYP-EGVDVVYESVGGAMFDLAVDALATKGRLIV  259 (362)
T ss_dssp             HHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCT-TCEEEEEECSCTHHHHHHHHHEEEEEEEEE
T ss_pred             HHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcC-CCCCEEEECCCHHHHHHHHHHHhcCCEEEE
Confidence            9999999999999999999999999999999999888777777777664 589999999999888899999999999999


Q ss_pred             EeccCCccc-----cc---c-hHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccc--------cc
Q 020487          237 IGTQGGAKT-----EL---N-ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIY--------KY  299 (325)
Q Consensus       237 ~g~~~~~~~-----~~---~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~--------~~  299 (325)
                      +|.......     .+   . ...++.+++++.++.......     ...+.++++++++.+|++++.+.        ..
T Consensus       260 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~  334 (362)
T 2c0c_A          260 IGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLS-----KYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRF  334 (362)
T ss_dssp             CCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGG-----GHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSC
T ss_pred             EeCCCCcCcccccccccccccHHHHHhhcceEEEEEhhhhhh-----hHHHHHHHHHHHHHCCCeEeeeccccccccccc
Confidence            987653210     00   1 245677899999986644321     12445667999999999987643        67


Q ss_pred             cchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          300 LPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       300 ~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      |+++++++|++.+++++..||+|+++
T Consensus       335 ~~l~~~~~A~~~~~~~~~~gKvvv~~  360 (362)
T 2c0c_A          335 TGLESIFRAVNYMYMGKNTGKIVVEL  360 (362)
T ss_dssp             BSTTHHHHHHHHHHTTCCSBEEEEEC
T ss_pred             cCHHHHHHHHHHHHcCCCCceEEEEc
Confidence            89999999999999988889999875

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=2.2e-51  Score=375.90  Aligned_cols=314  Identities=27%  Similarity=0.414  Sum_probs=269.1

Q ss_pred             CEEEEEcCCC-----------CCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhh----------------CCCCC
Q 020487            1 MKAIVITQPG-----------SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK----------------GSYPP   53 (325)
Q Consensus         1 m~a~~~~~~~-----------~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~----------------g~~~~   53 (325)
                      |||+++..++           ..+.+++++.|.|+|+++||+|||.++|||++|++...                +.++.
T Consensus        25 mkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~g~~~~  104 (447)
T 4a0s_A           25 YLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWAT  104 (447)
T ss_dssp             EEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTTCGGGG
T ss_pred             heeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcccCcccc
Confidence            7999999877           12359999999999999999999999999999985432                22222


Q ss_pred             CCCCC-CCCCCceeEEEEEecCCCCCCCCCCEEEEEcC---------------------------CceeeeEEeecCCce
Q 020487           54 PKGAS-PYPGLECSGTILSVGKNVSRWKVGDQVCALLG---------------------------GGGYAEKVAVPAGQV  105 (325)
Q Consensus        54 ~~~~p-~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~---------------------------~g~~~~~~~~~~~~~  105 (325)
                      ...+| .++|||++|+|+++|+++++|++||+|+..+.                           +|+|+||++++++.+
T Consensus       105 ~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~~  184 (447)
T 4a0s_A          105 RHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQL  184 (447)
T ss_dssp             GGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSEEEEEGGGE
T ss_pred             ccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeeeeecCHHHc
Confidence            22345 58999999999999999999999999997541                           599999999999999


Q ss_pred             eeCCCCCCHHhhccCcchHHHHHHHHHh--hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHc
Q 020487          106 LPVPSGVSLKDAAAFPEVACTVWSTVFM--TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL  183 (325)
Q Consensus       106 ~~~p~~~~~~~aa~l~~~~~~a~~~l~~--~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~  183 (325)
                      +++|+++++++|++++..++|||+++..  .+++++|++|||+|++|++|++++|+++..|++|+++++++++++.++++
T Consensus       185 ~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~l  264 (447)
T 4a0s_A          185 LPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRAL  264 (447)
T ss_dssp             EECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT
T ss_pred             EECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc
Confidence            9999999999999999999999999864  38899999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEeCCCch------------------HHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCccc
Q 020487          184 GADVCINYKTED------------------FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT  245 (325)
Q Consensus       184 g~~~~~~~~~~~------------------~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~  245 (325)
                      |++.+++....+                  +.+.+.+.+ +.++|++|||+|...+..++++++++|+++.+|...+...
T Consensus       265 Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~  343 (447)
T 4a0s_A          265 GCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKA-GREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSGYLH  343 (447)
T ss_dssp             TCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHH-SSCCSEEEECSCHHHHHHHHHHSCTTCEEEESCCTTCSEE
T ss_pred             CCCEEEecccccccccccccccccchhhhHHHHHHHHHh-CCCceEEEECCCchHHHHHHHHHhcCCEEEEEecCCCccc
Confidence            999988754432                  256777777 5689999999999888899999999999999997765545


Q ss_pred             ccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          246 ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       246 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      .++...++.+++++.++.....          +.++.+++++.+|+++++++++|+++++++|++.+.+++..||+|+.+
T Consensus       344 ~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~GKvvv~~  413 (447)
T 4a0s_A          344 TFDNRYLWMKLKKIVGSHGANH----------EEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVLC  413 (447)
T ss_dssp             EEEHHHHHHTTCEEEECCSCCH----------HHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEES
T ss_pred             ccCHHHHHhCCCEEEecCCCCH----------HHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHhcCCCceEEEEEe
Confidence            6677778889999998765432          122348899999999999999999999999999999999999998864

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.3e-50  Score=357.19  Aligned_cols=307  Identities=22%  Similarity=0.292  Sum_probs=263.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhC-CCCC-CCCCCCCCCCceeEEEEEecCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG-SYPP-PKGASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g-~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      |||+++..++   .+++++.|.|+|+++||+|||.++|||++|++.+.+ ..+. ...+|.++|||++|+|+++|+++++
T Consensus         5 mka~~~~~~~---~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   81 (352)
T 1e3j_A            5 NLSAVLYKQN---DLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKH   81 (352)
T ss_dssp             CEEEEEEETT---EEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCS
T ss_pred             CEEEEEEcCC---cEEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCC
Confidence            8999999765   389999999999999999999999999999998874 3321 1245889999999999999999999


Q ss_pred             CCCCCEEEEEc----------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHH
Q 020487           79 WKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST  130 (325)
Q Consensus        79 ~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~  130 (325)
                      |++||+|++..                            .+|+|+||++++++.++++|+++++++|+.+ .++.+||++
T Consensus        82 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~a  160 (352)
T 1e3j_A           82 LKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EPLSVGVHA  160 (352)
T ss_dssp             CCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HHHHHHHHH
T ss_pred             CCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh-chHHHHHHH
Confidence            99999998742                            3699999999999999999999999999854 678899999


Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCC-chHHHHHHHHhC---C
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETG---G  206 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~---~  206 (325)
                      + +.+++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++++|+++++++++ .++.+.+.+.++   +
T Consensus       161 l-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g  238 (352)
T 1e3j_A          161 C-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIG  238 (352)
T ss_dssp             H-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSS
T ss_pred             H-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccC
Confidence            9 7789999999999997 99999999999999999999999999999999999999998874 666777777775   5


Q ss_pred             CcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHH
Q 020487          207 KGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWP  285 (325)
Q Consensus       207 ~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (325)
                      .++|++|||+|.. .+..++++++++|+++.+|... ....++...++.+++++.++.....           .++++++
T Consensus       239 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~~~~~i~g~~~~~~-----------~~~~~~~  306 (352)
T 1e3j_A          239 DLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGS-QMVTVPLVNACAREIDIKSVFRYCN-----------DYPIALE  306 (352)
T ss_dssp             SCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCS-SCCCCCHHHHHTTTCEEEECCSCSS-----------CHHHHHH
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCC-CCccccHHHHHhcCcEEEEeccchH-----------HHHHHHH
Confidence            6899999999976 5788899999999999998644 2345667778889999998754311           1334889


Q ss_pred             HHHCCcc--ccccccccchhhHHHHHHHHHhCC-CceeEEEeC
Q 020487          286 AIAVGKV--KPVIYKYLPLCEAAEAHQLMESSQ-HIGKIMLVP  325 (325)
Q Consensus       286 ~~~~g~l--~~~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi~~  325 (325)
                      ++.+|++  +++++++|+++++++|++.+.+++ ..+|+|++|
T Consensus       307 l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~  349 (352)
T 1e3j_A          307 MVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISC  349 (352)
T ss_dssp             HHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEEC
T ss_pred             HHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEec
Confidence            9999986  467789999999999999999887 689999975

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=3.5e-50  Score=357.43  Aligned_cols=305  Identities=23%  Similarity=0.306  Sum_probs=262.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCC-CC-CCCCCCCCCCceeEEEEEecCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY-PP-PKGASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~-~~-~~~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      |||+++..++   .+++++.+.|+|+++||+|||.++|||++|++.+.+.. +. ...+|.++|||++|+|+++|+++++
T Consensus         8 mka~~~~~~~---~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~   84 (356)
T 1pl8_A            8 NLSLVVHGPG---DLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH   84 (356)
T ss_dssp             CEEEEEEETT---EEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred             ceEEEEecCC---cEEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCC
Confidence            8999999765   39999999999999999999999999999999887432 11 1235889999999999999999999


Q ss_pred             CCCCCEEEEEc----------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHH
Q 020487           79 WKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST  130 (325)
Q Consensus        79 ~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~  130 (325)
                      |++||+|++..                            .+|+|+||++++++.++++|+++++++|+.+ .++.+||++
T Consensus        85 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~~~ta~~a  163 (356)
T 1pl8_A           85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EPLSVGIHA  163 (356)
T ss_dssp             CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HHHHHHHHH
T ss_pred             CCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhh-chHHHHHHH
Confidence            99999998741                            3699999999999999999999999999865 678899999


Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCC---CchHHHHHHHHhCC
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYK---TEDFVARVKEETGG  206 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~  206 (325)
                      + +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++++++++   ..++.+.+.+.++ 
T Consensus       164 l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~-  240 (356)
T 1pl8_A          164 C-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLG-  240 (356)
T ss_dssp             H-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHT-
T ss_pred             H-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhC-
Confidence            9 7789999999999997 9999999999999999 999999999999999999999999887   3566777888777 


Q ss_pred             CcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHH
Q 020487          207 KGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWP  285 (325)
Q Consensus       207 ~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (325)
                      +++|++|||+|.. .+..++++++++|+++.+|... ....++...++.+++++.++.....           .++++++
T Consensus       241 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~~~~~i~g~~~~~~-----------~~~~~~~  308 (356)
T 1pl8_A          241 CKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGS-EMTTVPLLHAAIREVDIKGVFRYCN-----------TWPVAIS  308 (356)
T ss_dssp             SCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCC-SCCCCCHHHHHHTTCEEEECCSCSS-----------CHHHHHH
T ss_pred             CCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCC-CCCccCHHHHHhcceEEEEecccHH-----------HHHHHHH
Confidence            6899999999976 5788899999999999998643 3345677778889999998754311           1334889


Q ss_pred             HHHCCcc--ccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          286 AIAVGKV--KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       286 ~~~~g~l--~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ++.+|++  +++++++|+++++++|++.++++ ..+|+|+++
T Consensus       309 l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~  349 (356)
T 1pl8_A          309 MLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKC  349 (356)
T ss_dssp             HHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEEC
T ss_pred             HHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeC
Confidence            9999986  46778999999999999999888 788999875

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=7.8e-51  Score=360.11  Aligned_cols=304  Identities=23%  Similarity=0.337  Sum_probs=245.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC-CCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-PKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      |||+++..++++  +++++.|.|+|+++||+|||.++|||++|++.+.|.++. ...+|.++|||++|+|+++|++ ++|
T Consensus         4 mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~   80 (344)
T 2h6e_A            4 SKAALLKKFSEP--LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKV   80 (344)
T ss_dssp             EEBCEECSCCC-------EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCC
T ss_pred             eEEEEEecCCCC--CeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCC
Confidence            799999988743  888999999999999999999999999999999987652 2246889999999999999999 999


Q ss_pred             CCCCEEEEEc---------------------------CCceeeeEEeec-CCceeeCCCCCCHHhhccCcchHHHHHHHH
Q 020487           80 KVGDQVCALL---------------------------GGGGYAEKVAVP-AGQVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (325)
Q Consensus        80 ~~Gd~V~~~~---------------------------~~g~~~~~~~~~-~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l  131 (325)
                      ++||+|++..                           .+|+|+||++++ ++.++++ +++++++|+++++++.|||+++
T Consensus        81 ~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~al  159 (344)
T 2h6e_A           81 KKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMGAI  159 (344)
T ss_dssp             CTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHHHH
Confidence            9999998652                           369999999999 9999999 9999999999999999999999


Q ss_pred             Hhh----cCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHHcCCCEEEeCCC-chHHHHHHHHh
Q 020487          132 FMT----SHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEET  204 (325)
Q Consensus       132 ~~~----~~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~  204 (325)
                      ...    .++ +|++|||+|+ |++|++++|+|+.+  |++|+++++++++++.++++|++++++++. .+   .+.+.+
T Consensus       160 ~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~---~~~~~~  234 (344)
T 2h6e_A          160 RQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAES---LINKLT  234 (344)
T ss_dssp             HHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHH---HHHHHH
T ss_pred             HhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchH---HHHHhh
Confidence            654    288 9999999999 99999999999999  999999999999999999999999987654 33   234555


Q ss_pred             CCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHH
Q 020487          205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV  283 (325)
Q Consensus       205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  283 (325)
                      ++.++|++|||+|.. .+..++++++++|+++.+|.... ...++...++.+++++.++....          .+.++++
T Consensus       235 ~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~----------~~~~~~~  303 (344)
T 2h6e_A          235 DGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGK-RVSLEAFDTAVWNKKLLGSNYGS----------LNDLEDV  303 (344)
T ss_dssp             TTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS-CCCCCHHHHHHTTCEEEECCSCC----------HHHHHHH
T ss_pred             cCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCC-CcccCHHHHhhCCcEEEEEecCC----------HHHHHHH
Confidence            556899999999987 67889999999999999987653 34567777888999999876432          1234558


Q ss_pred             HHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          284 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       284 ~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ++++.+|++++.+ ++|+++++++|++.+++++..||+|++|
T Consensus       304 ~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          304 VRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             HHHHHTTSSCCCE-EEECC----------------CEEEECC
T ss_pred             HHHHHcCCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence            9999999999988 9999999999999999888889999976

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=1.9e-50  Score=361.60  Aligned_cols=317  Identities=27%  Similarity=0.357  Sum_probs=259.3

Q ss_pred             CEEEEEcCCCCCcceEE-EeecCCCC-CCCeEEEEEeeeecChhhhhhhhCCCC--------------CCCCCCCCCCCc
Q 020487            1 MKAIVITQPGSPEVLQL-QEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYP--------------PPKGASPYPGLE   64 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~-~~~~~~~~-~~~ev~v~v~~~~i~~~D~~~~~g~~~--------------~~~~~p~~~G~e   64 (325)
                      |||+++..++.++.+++ ++.+.|+| +++||+|||.++|||++|++.+.|..+              ....+|.++|||
T Consensus        22 mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~v~G~E  101 (375)
T 2vn8_A           22 SMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRD  101 (375)
T ss_dssp             EEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSBCCCCE
T ss_pred             ceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCccccee
Confidence            79999999988778999 99999985 999999999999999999999988532              112368899999


Q ss_pred             eeEEEEEecCCCCCCCCCCEEEEEcC---CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcC----C
Q 020487           65 CSGTILSVGKNVSRWKVGDQVCALLG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH----L  137 (325)
Q Consensus        65 ~~G~V~~vG~~~~~~~~Gd~V~~~~~---~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~----~  137 (325)
                      ++|+|+++|+++++|++||+|++...   +|+|+||++++++.++++|+++++++||+++.+++|||+++.+.++    +
T Consensus       102 ~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~  181 (375)
T 2vn8_A          102 VSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKN  181 (375)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTT
T ss_pred             eeEEEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhccccccc
Confidence            99999999999999999999998753   6999999999999999999999999999999999999999977788    8


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      ++|++|||+|++|++|++++|+|+..|++|++++ ++++++.++++|++.+++++..++.+.+.+   ..++|++|||+|
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~---~~g~D~vid~~g  257 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKS---LKPFDFILDNVG  257 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHT---SCCBSEEEESSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhh---cCCCCEEEECCC
Confidence            9999999999889999999999999999999988 678889999999999999887776665544   247999999999


Q ss_pred             hHH--HHHhhccccCCCEEEEEeccCCcccc---cch------HHHHhhcc-Ee-eecccccccchhHHHHHHHHHHHHH
Q 020487          218 ASY--FQRNLGSLNIDGRLFIIGTQGGAKTE---LNI------TSLFAKRL-TV-QAAGLRSRSTENKALIVSEVEKNVW  284 (325)
Q Consensus       218 ~~~--~~~~~~~l~~~g~~v~~g~~~~~~~~---~~~------~~~~~~~~-~i-~~~~~~~~~~~~~~~~~~~~~~~~~  284 (325)
                      ...  +..++++++++|+++.+|........   +..      ..++.+++ .+ .+..+........    .+.+++++
T Consensus       258 ~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~  333 (375)
T 2vn8_A          258 GSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMAS----GPCLDDIA  333 (375)
T ss_dssp             TTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCCCC----HHHHHHHH
T ss_pred             ChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEEeCCC----HHHHHHHH
Confidence            873  47889999999999999864321100   101      12223322 11 1111110000011    23455589


Q ss_pred             HHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          285 PAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       285 ~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++.+|+++++++++|+++++++|++.+++++..||+|+++
T Consensus       334 ~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          334 ELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             HHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            99999999998999999999999999999988889999875

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=1.8e-49  Score=350.40  Aligned_cols=312  Identities=21%  Similarity=0.250  Sum_probs=272.0

Q ss_pred             CEEEEEcC--CC--CCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCc----eeEEEEEe
Q 020487            1 MKAIVITQ--PG--SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLE----CSGTILSV   72 (325)
Q Consensus         1 m~a~~~~~--~~--~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e----~~G~V~~v   72 (325)
                      |||+++..  +|  .++.+++++.|.|+|+++||+|||.+++||++|++.+.+....  .+|.++|||    ++|+|++ 
T Consensus         8 mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~~--~~p~~~G~e~g~~~~G~V~~-   84 (336)
T 4b7c_A            8 NRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARSY--IPPVGIGEVMRALGVGKVLV-   84 (336)
T ss_dssp             EEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCCS--SCCCCTTSBCCCEEEEEEEE-
T ss_pred             ccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhccccc--CCCCCCCcccCCceEEEEEe-
Confidence            79999985  23  4567999999999999999999999999999999888764332  236677777    7999999 


Q ss_pred             cCCCCCCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhh--ccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCc
Q 020487           73 GKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA--AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS  150 (325)
Q Consensus        73 G~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a--a~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g  150 (325)
                       +++++|++||+|++.   |+|+||++++++.++++|+++++.++  ++++.+++|||+++.+..++++|++|||+|++|
T Consensus        85 -~~v~~~~vGdrV~~~---G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g  160 (336)
T 4b7c_A           85 -SKHPGFQAGDYVNGA---LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAG  160 (336)
T ss_dssp             -ECSTTCCTTCEEEEE---CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTS
T ss_pred             -cCCCCCCCCCEEecc---CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCC
Confidence             458899999999987   89999999999999999999977776  789999999999998889999999999999999


Q ss_pred             hHHHHHHHHHHHCCCEEEEEecChhhHHHH-HHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhcccc
Q 020487          151 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN  229 (325)
Q Consensus       151 ~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~  229 (325)
                      ++|++++|+++..|++|+++++++++.+.+ +++|++.+++....++.+.+.+.++ +++|++|||+|...+..++++++
T Consensus       161 ~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vi~~~g~~~~~~~~~~l~  239 (336)
T 4b7c_A          161 AVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECP-KGIDVFFDNVGGEILDTVLTRIA  239 (336)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCT-TCEEEEEESSCHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcC-CCceEEEECCCcchHHHHHHHHh
Confidence            999999999999999999999999999999 8999999999988888888888885 58999999999988899999999


Q ss_pred             CCCEEEEEeccCCc------ccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchh
Q 020487          230 IDGRLFIIGTQGGA------KTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLC  303 (325)
Q Consensus       230 ~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~  303 (325)
                      ++|+++.+|.....      ...++...++.+++++.++.......     ...+.++++++++.+|++++.+..+++++
T Consensus       240 ~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~~~l~~~g~l~~~~~~~~~l~  314 (336)
T 4b7c_A          240 FKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQ-----RFPEGLKEMATWLAEGKLQSREDIVEGLE  314 (336)
T ss_dssp             EEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGG-----GHHHHHHHHHHHHHTTSSCCCEEEEECGG
T ss_pred             hCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhh-----hhHHHHHHHHHHHHCCCcccceeeecCHH
Confidence            99999999876521      13456667888999999987654432     13456667999999999999887789999


Q ss_pred             hHHHHHHHHHhCCCceeEEEeC
Q 020487          304 EAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       304 ~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ++++|++.+.+++..||+|+++
T Consensus       315 ~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          315 TFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             GHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHcCCCCceEEEeC
Confidence            9999999999999999999874

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=4.2e-51  Score=363.87  Aligned_cols=303  Identities=23%  Similarity=0.304  Sum_probs=261.9

Q ss_pred             CEEEEEcCCCCCcceEEEe--ecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCC-
Q 020487            1 MKAIVITQPGSPEVLQLQE--VEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS-   77 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~--~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~-   77 (325)
                      |||+++..++.+  +++++  .|.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++++ 
T Consensus         7 mka~~~~~~~~~--l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~GhE~~G~V~~vG~~v~~   83 (360)
T 1piw_A            7 FEGIAIQSHEDW--KNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN-MKMPLVVGHEIVGKVVKLGPKSNS   83 (360)
T ss_dssp             EEEEEECCSSST--TSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSC-CCSSEECCCCEEEEEEEECTTCCS
T ss_pred             eEEEEEecCCCC--eeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCC-CCCCcccCcCceEEEEEeCCCCCC
Confidence            799999988744  77888  9999999999999999999999999999987653 24688999999999999999999 


Q ss_pred             CCCCCCEEEEE-----------------------------------cCCceeeeEEeecCCceeeCCCCCCHHhhccCcc
Q 020487           78 RWKVGDQVCAL-----------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE  122 (325)
Q Consensus        78 ~~~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  122 (325)
                      +|++||+|+..                                   ..+|+|+||++++++.++++|+++++++|+++++
T Consensus        84 ~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  163 (360)
T 1piw_A           84 GLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLC  163 (360)
T ss_dssp             SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHHGGGGT
T ss_pred             CCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHhhhhhh
Confidence            99999999421                                   1358999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCc-hHHHHHH
Q 020487          123 VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE-DFVARVK  201 (325)
Q Consensus       123 ~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~  201 (325)
                      ++.|||+++.. +++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++++|+++++++... ++.+.+.
T Consensus       164 ~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~  241 (360)
T 1piw_A          164 GGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYF  241 (360)
T ss_dssp             HHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSC
T ss_pred             hHHHHHHHHHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhh
Confidence            99999999955 88999999999999 999999999999999999999999999999999999999987765 5443332


Q ss_pred             HHhCCCcccEEEeCCCh---HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHH
Q 020487          202 EETGGKGVDVILDCMGA---SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSE  278 (325)
Q Consensus       202 ~~~~~~~~d~vi~~~g~---~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  278 (325)
                           .++|++|||+|.   ..+..++++++++|+++.+|.... ...++...++.+++++.++.....          +
T Consensus       242 -----~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----------~  305 (360)
T 1piw_A          242 -----DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALGSI----------K  305 (360)
T ss_dssp             -----SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCCCH----------H
T ss_pred             -----cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecCCH----------H
Confidence                 379999999998   567888999999999999987654 214555566778999998755321          2


Q ss_pred             HHHHHHHHHHCCccccccccccchhh--HHHHHHHHHhCCCceeEEEeC
Q 020487          279 VEKNVWPAIAVGKVKPVIYKYLPLCE--AAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       279 ~~~~~~~~~~~g~l~~~~~~~~~l~~--~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      .++++++++.+|++++.+ ++|++++  +++|++.+++++..||+|++|
T Consensus       306 ~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~  353 (360)
T 1piw_A          306 ELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVG  353 (360)
T ss_dssp             HHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEEEec
Confidence            345588999999999888 9999999  999999999988889999875

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=3.8e-50  Score=358.37  Aligned_cols=305  Identities=19%  Similarity=0.261  Sum_probs=262.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCC--------CCCCCeEEEEEeeeecChhhhhhhhCCC-C-CCCCCCCCCCCceeEEEE
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDP--------QIKDDEVLIKVEATALNRADTLQRKGSY-P-PPKGASPYPGLECSGTIL   70 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~--------~~~~~ev~v~v~~~~i~~~D~~~~~g~~-~-~~~~~p~~~G~e~~G~V~   70 (325)
                      |||+++..++.   +++++.|.|        +|+++||+|||.++|||++|++.+.+.. + ....+|.++|||++|+|+
T Consensus         9 mka~~~~~~~~---l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~V~   85 (363)
T 3m6i_A            9 NIGVFTNPQHD---LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVI   85 (363)
T ss_dssp             CEEEEECTTCC---EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEE
T ss_pred             ceeEEEeCCCc---EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEEEE
Confidence            79999997654   999999999        9999999999999999999999887432 1 123468899999999999


Q ss_pred             EecCCCCCCCCCCEEEEEc----------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcc
Q 020487           71 SVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE  122 (325)
Q Consensus        71 ~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  122 (325)
                      ++|+++++|++||+|+...                            .+|+|+||++++++.++++|+ +++++||++ .
T Consensus        86 ~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~aa~~-~  163 (363)
T 3m6i_A           86 AVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAML-E  163 (363)
T ss_dssp             EECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHHHHHH-H
T ss_pred             EECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHHHHhh-h
Confidence            9999999999999998742                            469999999999999999999 999999977 5


Q ss_pred             hHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCC-----CchH
Q 020487          123 VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYK-----TEDF  196 (325)
Q Consensus       123 ~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~  196 (325)
                      ++.+||+++ +.+++++|++|||+|+ |++|++++|+|+.+|++ |++++.++++++.++++ ++.++++.     ..++
T Consensus       164 ~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~  240 (363)
T 3m6i_A          164 PLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEES  240 (363)
T ss_dssp             HHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHH
T ss_pred             HHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHH
Confidence            788999999 7889999999999998 99999999999999997 99999999999999999 65554432     3567


Q ss_pred             HHHHHHHhCCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHH
Q 020487          197 VARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALI  275 (325)
Q Consensus       197 ~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  275 (325)
                      .+.+++.++++++|++|||+|++ .+..++++++++|+++.+|.... ...++...++.+++++.++... .        
T Consensus       241 ~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~-~--------  310 (363)
T 3m6i_A          241 AKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKN-EIQIPFMRASVREVDLQFQYRY-C--------  310 (363)
T ss_dssp             HHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCS-CCCCCHHHHHHHTCEEEECCSC-S--------
T ss_pred             HHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCC-CccccHHHHHhcCcEEEEccCC-H--------
Confidence            78888999888999999999987 57899999999999999987554 3457777888899999988654 1        


Q ss_pred             HHHHHHHHHHHHHCCcc--ccccccccchhhHHHHHHHHHhC-CCceeEEEeC
Q 020487          276 VSEVEKNVWPAIAVGKV--KPVIYKYLPLCEAAEAHQLMESS-QHIGKIMLVP  325 (325)
Q Consensus       276 ~~~~~~~~~~~~~~g~l--~~~~~~~~~l~~~~~a~~~~~~~-~~~gkvvi~~  325 (325)
                        +.++++++++.+|++  .++++++|+|+++++|++.++++ ...+|+|++.
T Consensus       311 --~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~  361 (363)
T 3m6i_A          311 --NTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQS  361 (363)
T ss_dssp             --SCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEEC
T ss_pred             --HHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEec
Confidence              122338899999998  56778999999999999999987 5678999863

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.3e-51  Score=358.22  Aligned_cols=315  Identities=19%  Similarity=0.290  Sum_probs=261.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++.+..+++++.|.|+|+++||+|||.++|||++|++.+.|..+....+|.++|||++|+|+++  ++++|+
T Consensus         4 mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~~~   81 (328)
T 1xa0_A            4 FQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPRFR   81 (328)
T ss_dssp             EEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSSCC
T ss_pred             ceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCCCC
Confidence            799999988765568999999999999999999999999999999998865543456889999999999995  568899


Q ss_pred             CCCEEEEEc------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH--hhcCCCCCC-EEEEEcCCch
Q 020487           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF--MTSHLSPGE-SFLVHGGSSG  151 (325)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~--~~~~~~~~~-~vli~g~~g~  151 (325)
                      +||+|+...      .+|+|+||++++++.++++|+++++++|+++++.+.|+|.++.  .+.++++|+ +|||+|++|+
T Consensus        82 vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~  161 (328)
T 1xa0_A           82 EGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGG  161 (328)
T ss_dssp             TTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSH
T ss_pred             CCCEEEEccccCCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCH
Confidence            999999763      3699999999999999999999999999999999999998874  346789986 9999999999


Q ss_pred             HHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCC
Q 020487          152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID  231 (325)
Q Consensus       152 ~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~  231 (325)
                      +|++++|+|+..|++|+++++++++++.++++|++++++++... .+.+.+.. +.++|++|||+|.+.+..++++++++
T Consensus       162 vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~-~~~~~~~~-~~~~d~vid~~g~~~~~~~~~~l~~~  239 (328)
T 1xa0_A          162 VGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVM-AERIRPLD-KQRWAAAVDPVGGRTLATVLSRMRYG  239 (328)
T ss_dssp             HHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC----------CC-SCCEEEEEECSTTTTHHHHHHTEEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcH-HHHHHHhc-CCcccEEEECCcHHHHHHHHHhhccC
Confidence            99999999999999999999999999999999999999876543 22233333 34799999999998888999999999


Q ss_pred             CEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHH
Q 020487          232 GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL  311 (325)
Q Consensus       232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~  311 (325)
                      |+++.+|...+....++...++.+++++.++.......    ....+.++.+.+++.+| +++ ++++|+++++++|++.
T Consensus       240 G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~----~~~~~~~~~~~~~~~~g-l~~-~~~~~~l~~~~~A~~~  313 (328)
T 1xa0_A          240 GAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPM----DLRLRIWERLAGDLKPD-LER-IAQEISLAELPQALKR  313 (328)
T ss_dssp             EEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCH----HHHHHHHHHHHTTTCCC-HHH-HEEEEEGGGHHHHHHH
T ss_pred             CEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCH----HHHHHHHHHHHHHHHcC-Cce-eeeEeCHHHHHHHHHH
Confidence            99999987654334556667778999999875322211    12334555677777778 766 4699999999999999


Q ss_pred             HHhCCCceeEEEeC
Q 020487          312 MESSQHIGKIMLVP  325 (325)
Q Consensus       312 ~~~~~~~gkvvi~~  325 (325)
                      +++++..||+|+++
T Consensus       314 ~~~~~~~gKvvv~~  327 (328)
T 1xa0_A          314 ILRGELRGRTVVRL  327 (328)
T ss_dssp             HHHTCCCSEEEEEC
T ss_pred             HHcCCCCCeEEEEe
Confidence            99988889999875

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=8.6e-52  Score=364.43  Aligned_cols=317  Identities=21%  Similarity=0.313  Sum_probs=266.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++.++.+++++.|.|+|+++||+|||.++|||++|++.+.|..+....+|.++|||++|+|+++  ++++|+
T Consensus         5 mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~v~~~~   82 (330)
T 1tt7_A            5 FQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--NDPRFA   82 (330)
T ss_dssp             EEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--SSTTCC
T ss_pred             ceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--CCCCCC
Confidence            799999988765569999999999999999999999999999999999876544456889999999999996  467899


Q ss_pred             CCCEEEEEc------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH--hhcCCCCCC-EEEEEcCCch
Q 020487           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF--MTSHLSPGE-SFLVHGGSSG  151 (325)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~--~~~~~~~~~-~vli~g~~g~  151 (325)
                      +||+|+...      .+|+|+||++++++.++++|+++++++|+++++.+.|+|.++.  ...++++|+ +|||+|++|+
T Consensus        83 vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~  162 (330)
T 1tt7_A           83 EGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGG  162 (330)
T ss_dssp             TTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSH
T ss_pred             CCCEEEEcccccCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCH
Confidence            999999763      4699999999999999999999999999999999999998875  346788986 9999999999


Q ss_pred             HHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCC
Q 020487          152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID  231 (325)
Q Consensus       152 ~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~  231 (325)
                      +|++++|+|+..|++|+++++++++++.++++|+++++++++.. .+.+.+.. +.++|++|||+|.+.+..++++++++
T Consensus       163 vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~-~~~~~~~~-~~~~d~vid~~g~~~~~~~~~~l~~~  240 (330)
T 1tt7_A          163 VGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVY-DGTLKALS-KQQWQGAVDPVGGKQLASLLSKIQYG  240 (330)
T ss_dssp             HHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHC-SSCCCSSC-CCCEEEEEESCCTHHHHHHHTTEEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCch-HHHHHHhh-cCCccEEEECCcHHHHHHHHHhhcCC
Confidence            99999999999999999999999999999999999988753211 01112222 34799999999998889999999999


Q ss_pred             CEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHH
Q 020487          232 GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL  311 (325)
Q Consensus       232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~  311 (325)
                      |+++.+|...+....++...++.+++++.|+.......    ....+.++.+.+++.+|++++.++++|+++++++|++.
T Consensus       241 G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~----~~~~~~~~~~~~~~~~g~l~~~i~~~~~l~~~~~A~~~  316 (330)
T 1tt7_A          241 GSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPM----DVRAAVWERMSSDLKPDQLLTIVDREVSLEETPGALKD  316 (330)
T ss_dssp             EEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCH----HHHHHHHHHTTTTSCCSCSTTSEEEEECSTTHHHHHHH
T ss_pred             CEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCH----HHHHHHHHHHHHHHhcCCcccccceEEcHHHHHHHHHH
Confidence            99999987664444556667778999999875322211    11334555677888889999888999999999999999


Q ss_pred             HHhCCCceeEEEeC
Q 020487          312 MESSQHIGKIMLVP  325 (325)
Q Consensus       312 ~~~~~~~gkvvi~~  325 (325)
                      +++++..||+|+++
T Consensus       317 ~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          317 ILQNRIQGRVIVKL  330 (330)
T ss_dssp             TTTTCCSSEEEECC
T ss_pred             HHcCCCCCeEEEeC
Confidence            99888889999875

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.3e-50  Score=358.68  Aligned_cols=304  Identities=21%  Similarity=0.272  Sum_probs=257.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      ||+++...+++  .+++++.|.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++++.|+
T Consensus        23 ~~a~~~~~~~~--~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~V~~~~   99 (369)
T 1uuf_A           23 IKAVGAYSAKQ--PLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG-TVYPCVPGHEIVGRVVAVGDQVEKYA   99 (369)
T ss_dssp             CEEEEBSSTTS--CCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC-CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             EEEEEEcCCCC--CcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCC-CCCCeecccCceEEEEEECCCCCCCC
Confidence            68888776543  4999999999999999999999999999999999987653 24688999999999999999999999


Q ss_pred             CCCEEEEE------------------------------------cCCceeeeEEeecCCceeeCCCC-CCHHhhccCcch
Q 020487           81 VGDQVCAL------------------------------------LGGGGYAEKVAVPAGQVLPVPSG-VSLKDAAAFPEV  123 (325)
Q Consensus        81 ~Gd~V~~~------------------------------------~~~g~~~~~~~~~~~~~~~~p~~-~~~~~aa~l~~~  123 (325)
                      +||+|+..                                    ..+|+|+||++++++.++++|++ +++++||+++.+
T Consensus       100 vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~~  179 (369)
T 1uuf_A          100 PGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCA  179 (369)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGGTH
T ss_pred             CCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhhhhh
Confidence            99999852                                    12589999999999999999999 999999999999


Q ss_pred             HHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHH
Q 020487          124 ACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE  203 (325)
Q Consensus       124 ~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  203 (325)
                      ++|||+++.+ .++++|++|||+|+ |++|++++|+|+..|++|+++++++++++.++++|+++++++...++...   .
T Consensus       180 ~~tA~~al~~-~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~---~  254 (369)
T 1uuf_A          180 GITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAA---H  254 (369)
T ss_dssp             HHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHT---T
T ss_pred             HHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHH---h
Confidence            9999999954 68999999999998 89999999999999999999999999999999999999998876543322   2


Q ss_pred             hCCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHH
Q 020487          204 TGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKN  282 (325)
Q Consensus       204 ~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  282 (325)
                      .  .++|++|||+|.. .+..++++++++|+++.+|........++...++.+++++.++.....          +.+++
T Consensus       255 ~--~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~  322 (369)
T 1uuf_A          255 L--KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGI----------PETQE  322 (369)
T ss_dssp             T--TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCH----------HHHHH
T ss_pred             h--cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCCH----------HHHHH
Confidence            2  4799999999976 578889999999999999876543224666677889999998765321          23445


Q ss_pred             HHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          283 VWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       283 ~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++++.+|++++.+ +.|+++++++|++.+.+++..||+|++|
T Consensus       323 ~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvi~~  364 (369)
T 1uuf_A          323 MLDFCAEHGIVADI-EMIRADQINEAYERMLRGDVKYRFVIDN  364 (369)
T ss_dssp             HHHHHHHHTCCCCE-EEECGGGHHHHHHHHHTTCSSSEEEEEG
T ss_pred             HHHHHHhCCCCcce-EEEcHHHHHHHHHHHHcCCCceEEEEec
Confidence            88999999998876 4799999999999999988889999875

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=1.2e-49  Score=354.01  Aligned_cols=302  Identities=21%  Similarity=0.291  Sum_probs=256.4

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (325)
Q Consensus         2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (325)
                      ++++..  +.++.+++++.|.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|++
T Consensus        11 ~a~~~~--~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~v   87 (357)
T 2cf5_A           11 TGWAAR--DPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM-SNYPMVPGHEVVGEVVEVGSDVSKFTV   87 (357)
T ss_dssp             EEEEEC--STTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTC-CCSSBCCCCEEEEEEEEECSSCCSCCT
T ss_pred             EEEEEc--cCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCC-CCCCeecCcceeEEEEEECCCCCCCCC
Confidence            455544  44456999999999999999999999999999999999887653 346889999999999999999999999


Q ss_pred             CCEEEEEc-----------------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHH
Q 020487           82 GDQVCALL-----------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT  126 (325)
Q Consensus        82 Gd~V~~~~-----------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~  126 (325)
                      ||+|+...                                   .+|+|+||++++++.++++|+++++++++++++++.|
T Consensus        88 GdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~t  167 (357)
T 2cf5_A           88 GDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVT  167 (357)
T ss_dssp             TCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGTHHHH
T ss_pred             CCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhhhHHH
Confidence            99997421                                   4689999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHh
Q 020487          127 VWSTVFMTSHLS-PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEET  204 (325)
Q Consensus       127 a~~~l~~~~~~~-~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~  204 (325)
                      ||+++. ..+++ +|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++ ++|+++++++.+.   +.+.+.+
T Consensus       168 a~~~l~-~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~---~~~~~~~  242 (357)
T 2cf5_A          168 VYSPLS-HFGLKQPGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQ---AKMSELA  242 (357)
T ss_dssp             HHHHHH-HTSTTSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCH---HHHHHST
T ss_pred             HHHHHH-hcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccH---HHHHHhc
Confidence            999984 56788 9999999997 99999999999999999999999999998888 8999999987753   3344444


Q ss_pred             CCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHH
Q 020487          205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV  283 (325)
Q Consensus       205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  283 (325)
                      +  ++|++|||+|.. .+..++++++++|+++.+|........++.. ++.+++++.++.....          +.++++
T Consensus       243 ~--g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~~~----------~~~~~~  309 (357)
T 2cf5_A          243 D--SLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIGSM----------KETEEM  309 (357)
T ss_dssp             T--TEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSCCH----------HHHHHH
T ss_pred             C--CCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccCCH----------HHHHHH
Confidence            3  799999999975 5788899999999999998765432224555 7789999998765321          234458


Q ss_pred             HHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          284 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       284 ~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ++++.+|++++.+ ++|+++++++|++.+++++..||+|+++
T Consensus       310 ~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~  350 (357)
T 2cf5_A          310 LEFCKEKGLSSII-EVVKMDYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_dssp             HHHHHHTTCCCCE-EEEEGGGHHHHHHHHHTTCSSSEEEEET
T ss_pred             HHHHHcCCCCCce-EEEeHHHHHHHHHHHHCCCCceEEEEeC
Confidence            8999999998776 7999999999999999988889999875

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=3.9e-50  Score=362.70  Aligned_cols=308  Identities=24%  Similarity=0.367  Sum_probs=265.5

Q ss_pred             CEEEEEcCCCCCc-------------------------ceEEEeecCCC-CCCCeEEEEEeeeecChhhhhhhhCCC---
Q 020487            1 MKAIVITQPGSPE-------------------------VLQLQEVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSY---   51 (325)
Q Consensus         1 m~a~~~~~~~~~~-------------------------~l~~~~~~~~~-~~~~ev~v~v~~~~i~~~D~~~~~g~~---   51 (325)
                      |||++++..+.++                         .+++++.+.|+ |+++||+|||.++|||++|++.+.|..   
T Consensus         3 m~a~~~~~~~~p~~~~~~~~~~~~~~~~m~a~~~~~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~   82 (404)
T 3ip1_A            3 LRAVRLHAKWDPRPEFKLGPKDIEGKLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGY   82 (404)
T ss_dssp             EEEEEEEEEECCCTTCCCCTTCBTTTBBSCGGGTEEEEEEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSB
T ss_pred             ceEEEecCCCCCCCCCCCCchhhhhhhhcceEEEEeCCceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCcc
Confidence            7999998777766                         78999999999 999999999999999999999988642   


Q ss_pred             ---CCCCCCCCCCCCceeEEEEEecCCC------CCCCCCCEEEEE---------------------------cCCceee
Q 020487           52 ---PPPKGASPYPGLECSGTILSVGKNV------SRWKVGDQVCAL---------------------------LGGGGYA   95 (325)
Q Consensus        52 ---~~~~~~p~~~G~e~~G~V~~vG~~~------~~~~~Gd~V~~~---------------------------~~~g~~~   95 (325)
                         +....+|.++|||++|+|+++|+++      ++|++||+|++.                           ..+|+|+
T Consensus        83 ~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~a  162 (404)
T 3ip1_A           83 ILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFA  162 (404)
T ss_dssp             BSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSB
T ss_pred             ccccccCCCCcccCccceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCc
Confidence               2223568899999999999999999      899999999973                           2469999


Q ss_pred             eEEeecCCceeeCCCCCC------HHhhccCcchHHHHHHHHHhh-cCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EE
Q 020487           96 EKVAVPAGQVLPVPSGVS------LKDAAAFPEVACTVWSTVFMT-SHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RV  167 (325)
Q Consensus        96 ~~~~~~~~~~~~~p~~~~------~~~aa~l~~~~~~a~~~l~~~-~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v  167 (325)
                      ||++++++.++++|++++      +.++++++.++++||+++... +++++|++|||+|+ |++|++++|+|+.+|+ +|
T Consensus       163 ey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~V  241 (404)
T 3ip1_A          163 EYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKV  241 (404)
T ss_dssp             SEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEE
T ss_pred             ceEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEE
Confidence            999999999999999875      466888999999999998655 48999999999998 9999999999999999 99


Q ss_pred             EEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH--HHHHhhccc----cCCCEEEEEeccC
Q 020487          168 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS--YFQRNLGSL----NIDGRLFIIGTQG  241 (325)
Q Consensus       168 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~--~~~~~~~~l----~~~g~~v~~g~~~  241 (325)
                      +++++++++++.++++|+++++++...++.+.+++.++++++|++|||+|..  .+..+++++    +++|+++.+|...
T Consensus       242 i~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~  321 (404)
T 3ip1_A          242 ILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARAD  321 (404)
T ss_dssp             EEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCC
T ss_pred             EEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCC
Confidence            9999999999999999999999999889999999999988999999999987  455566666    9999999999766


Q ss_pred             CcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCce
Q 020487          242 GAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIG  319 (325)
Q Consensus       242 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~l~~~~~a~~~~~~~~~~g  319 (325)
                      .. ..++...++.+++++.|+......         +.++.+++++.+| ++  ++++++|+|+++++|++.+.    .|
T Consensus       322 ~~-~~~~~~~~~~~~~~i~g~~~~~~~---------~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~G  386 (404)
T 3ip1_A          322 AK-IPLTGEVFQVRRAQIVGSQGHSGH---------GTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TD  386 (404)
T ss_dssp             SC-EEECHHHHHHTTCEEEECCCCCST---------THHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TC
T ss_pred             CC-CcccHHHHhccceEEEEecCCCch---------HHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CC
Confidence            53 467788888899999998653321         1233488999999 64  56789999999999999987    46


Q ss_pred             eEEEe
Q 020487          320 KIMLV  324 (325)
Q Consensus       320 kvvi~  324 (325)
                      |+|++
T Consensus       387 Kvvl~  391 (404)
T 3ip1_A          387 KSLVK  391 (404)
T ss_dssp             TTCSC
T ss_pred             cEEEe
Confidence            76665

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=3.6e-50  Score=349.71  Aligned_cols=298  Identities=32%  Similarity=0.493  Sum_probs=254.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++++..  +++.|.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+          
T Consensus         1 Mka~~~~~~g~~~~--l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~----------   68 (302)
T 1iz0_A            1 MKAWVLKRLGGPLE--LVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE----------   68 (302)
T ss_dssp             CEEEEECSTTSCEE--EEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET----------
T ss_pred             CeEEEEcCCCCchh--eEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE----------
Confidence            99999999887644  448899999999999999999999999999999776544568999999999998          


Q ss_pred             CCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG  160 (325)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a  160 (325)
                       ||+|++...+|+|+||++++++.++++|++++++++++++.+++|||+++.+.. +++|++|+|+|++|++|++++|++
T Consensus        69 -GdrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a  146 (302)
T 1iz0_A           69 -GRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVA  146 (302)
T ss_dssp             -TEEEEEECSSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHH
T ss_pred             -CcEEEEecCCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHH
Confidence             999999988899999999999999999999999999999999999999997677 999999999999999999999999


Q ss_pred             HHCCCEEEEEecChhhHHHHHHcCCCEEEeCCC-chHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEec
Q 020487          161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      +..|++|+++++++++++.++++|++++++.+. .++.+.+      +++|++|| +|...+..++++++++|+++.+|.
T Consensus       147 ~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~------~~~d~vid-~g~~~~~~~~~~l~~~G~~v~~g~  219 (302)
T 1iz0_A          147 RAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAW------GGLDLVLE-VRGKEVEESLGLLAHGGRLVYIGA  219 (302)
T ss_dssp             HHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHT------TSEEEEEE-CSCTTHHHHHTTEEEEEEEEEC--
T ss_pred             HHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHh------cCceEEEE-CCHHHHHHHHHhhccCCEEEEEeC
Confidence            999999999999999999999999999988765 4443333      47999999 998888999999999999999987


Q ss_pred             cCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHH---HHHCCccccccccccchhhHHHHHHHHHhCC
Q 020487          240 QGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWP---AIAVGKVKPVIYKYLPLCEAAEAHQLMESSQ  316 (325)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~  316 (325)
                      .......++...++.+++++.++.+...  ..    ..+.++++++   ++.+|++++.++++|+++++++|++.+.+++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~----~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~  293 (302)
T 1iz0_A          220 AEGEVAPIPPLRLMRRNLAVLGFWLTPL--LR----EGALVEEALGFLLPRLGRELRPVVGPVFPFAEAEAAFRALLDRG  293 (302)
T ss_dssp             -----CCCCTTHHHHTTCEEEECCHHHH--TT----CHHHHHHHHHHHGGGBTTTBCCCEEEEEEGGGHHHHHHHTTCTT
T ss_pred             CCCCCCCcCHHHHHhCCCeEEEEeccch--hh----hHHHHHHHHhhhHHHHcCCcccccceEEcHHHHHHHHHHHHcCC
Confidence            6543334566677889999998865422  01    1234455777   9999999999999999999999999999888


Q ss_pred             CceeEEEeC
Q 020487          317 HIGKIMLVP  325 (325)
Q Consensus       317 ~~gkvvi~~  325 (325)
                      ..||+|++|
T Consensus       294 ~~gKvvv~~  302 (302)
T 1iz0_A          294 HTGKVVVRL  302 (302)
T ss_dssp             CCBEEEEEC
T ss_pred             CCceEEEeC
Confidence            889999976

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=4.8e-50  Score=361.60  Aligned_cols=306  Identities=19%  Similarity=0.290  Sum_probs=264.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCC-CC-----CeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQI-KD-----DEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK   74 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~-~~-----~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~   74 (325)
                      |||+++..++   .+++++.|.|+| ++     +||+|||.++|||++|++.+.|..+.  .+|.++|||++|+|+++|+
T Consensus         3 MkA~~~~~~~---~l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~~--~~p~v~GhE~~G~V~~vG~   77 (398)
T 2dph_A            3 NKSVVYHGTR---DLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIV--PKGHVLGHEITGEVVEKGS   77 (398)
T ss_dssp             EEEEEEEETT---EEEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSCC--CTTCBCCCCEEEEEEEECT
T ss_pred             cEEEEEEcCC---CEEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCCC--CCCcccCCceEEEEEEECC
Confidence            8999999765   389999999998 68     99999999999999999999986532  4588999999999999999


Q ss_pred             CCCCCCCCCEEEEEc--------------------------------------CCceeeeEEeecCC--ceeeCCCCCCH
Q 020487           75 NVSRWKVGDQVCALL--------------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSL  114 (325)
Q Consensus        75 ~~~~~~~Gd~V~~~~--------------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~  114 (325)
                      ++++|++||+|+...                                      .+|+|+||++++++  .++++|+++++
T Consensus        78 ~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~  157 (398)
T 2dph_A           78 DVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQA  157 (398)
T ss_dssp             TCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSHHHH
T ss_pred             CCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCCCCCh
Confidence            999999999998631                                      25899999999987  89999999999


Q ss_pred             Hh----hccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEE
Q 020487          115 KD----AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI  189 (325)
Q Consensus       115 ~~----aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  189 (325)
                      ++    +++++.+++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++ ++
T Consensus       158 ~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i  234 (398)
T 2dph_A          158 MEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFE-TI  234 (398)
T ss_dssp             HHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCE-EE
T ss_pred             hhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCc-EE
Confidence            98    889999999999999 7889999999999997 9999999999999999 999999999999999999995 88


Q ss_pred             eCCCchH-HHHHHHHhCCCcccEEEeCCChH---------------HHHHhhccccCCCEEEEEeccC------------
Q 020487          190 NYKTEDF-VARVKEETGGKGVDVILDCMGAS---------------YFQRNLGSLNIDGRLFIIGTQG------------  241 (325)
Q Consensus       190 ~~~~~~~-~~~~~~~~~~~~~d~vi~~~g~~---------------~~~~~~~~l~~~g~~v~~g~~~------------  241 (325)
                      ++...++ .+.+.+.+++.++|++|||+|..               .+..++++++++|+++.+|...            
T Consensus       235 ~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~  314 (398)
T 2dph_A          235 DLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAG  314 (398)
T ss_dssp             ETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSHHHH
T ss_pred             cCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecccccccccccccccc
Confidence            8877665 77888888877899999999975               4788899999999999998762            


Q ss_pred             CcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccc--c--ccccccchhhHHHHHHHHHhCCC
Q 020487          242 GAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--P--VIYKYLPLCEAAEAHQLMESSQH  317 (325)
Q Consensus       242 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~--~~~~~~~l~~~~~a~~~~~~~~~  317 (325)
                      .....++...++.+++++.++.....          +.++++++++.+|+++  +  +++++|+|+++++|++.+.+++.
T Consensus       315 ~~~~~~~~~~~~~k~~~i~g~~~~~~----------~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~~  384 (398)
T 2dph_A          315 SGRLHLDFGKMWTKSIRIMTGMAPVT----------NYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSP  384 (398)
T ss_dssp             TTEEEEEHHHHHHTTCEEECSSCCGG----------GTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHTTCS
T ss_pred             CCcccccHHHHhhcCCEEEEeccCcH----------HHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhcCCc
Confidence            11234566677889999987644321          1233488999999998  6  67899999999999999998887


Q ss_pred             ceeEEEeC
Q 020487          318 IGKIMLVP  325 (325)
Q Consensus       318 ~gkvvi~~  325 (325)
                       +|+|++|
T Consensus       385 -gKvvv~~  391 (398)
T 2dph_A          385 -AKFVIDP  391 (398)
T ss_dssp             -CEEEECT
T ss_pred             -eEEEEec
Confidence             9999975

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=1.4e-48  Score=347.40  Aligned_cols=314  Identities=20%  Similarity=0.255  Sum_probs=268.9

Q ss_pred             CEEEEE-cCC---CCC--cceEEEeecCCCC-CCCeEEEEEeeeecChhhhhhhhC----CCCCCCCCCCCCCCceeEEE
Q 020487            1 MKAIVI-TQP---GSP--EVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKG----SYPPPKGASPYPGLECSGTI   69 (325)
Q Consensus         1 m~a~~~-~~~---~~~--~~l~~~~~~~~~~-~~~ev~v~v~~~~i~~~D~~~~~g----~~~~~~~~p~~~G~e~~G~V   69 (325)
                      |||+++ ..+   |.+  +.+++++.+.|+| +++||+|||.++|||++|++.+.+    .++....+|.++|||++|+|
T Consensus         9 mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E~~G~V   88 (357)
T 2zb4_A            9 VQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGII   88 (357)
T ss_dssp             EEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEEEEEEE
T ss_pred             ceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccccEEEEE
Confidence            799999 565   555  7799999999999 999999999999999999987775    23222346889999999999


Q ss_pred             EEecCCCCCCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCC-----CHHhhccCcchHHHHHHHHHhhcCCCCC--CE
Q 020487           70 LSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGV-----SLKDAAAFPEVACTVWSTVFMTSHLSPG--ES  142 (325)
Q Consensus        70 ~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~-----~~~~aa~l~~~~~~a~~~l~~~~~~~~~--~~  142 (325)
                      ++  +++++|++||+|++..  |+|+||++++++.++++|+++     +++ +++++.+++|||+++.+..++++|  ++
T Consensus        89 ~~--~~v~~~~vGdrV~~~~--G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~  163 (357)
T 2zb4_A           89 EE--SKHTNLTKGDFVTSFY--WPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKT  163 (357)
T ss_dssp             EE--ECSTTCCTTCEEEEEE--EESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCE
T ss_pred             Ee--cCCCCCCCCCEEEecC--CCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccE
Confidence            99  8889999999999874  899999999999999999998     554 678999999999999888899999  99


Q ss_pred             EEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  220 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~  220 (325)
                      +||+|++|++|++++|+++..|+ +|+++++++++++.+++ +|++.+++....++.+.+.+.+++ ++|++|||+|...
T Consensus       164 vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~-~~d~vi~~~G~~~  242 (357)
T 2zb4_A          164 MVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPA-GVDVYFDNVGGNI  242 (357)
T ss_dssp             EEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTT-CEEEEEESCCHHH
T ss_pred             EEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCC-CCCEEEECCCHHH
Confidence            99999999999999999999999 99999999999988886 999999998887888888888776 8999999999988


Q ss_pred             HHHhhccccCCCEEEEEeccCCcccccc---------hHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCc
Q 020487          221 FQRNLGSLNIDGRLFIIGTQGGAKTELN---------ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       221 ~~~~~~~l~~~g~~v~~g~~~~~~~~~~---------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                      +..++++++++|+++.+|........++         ...++.+++++.++....+.     ....+.++++++++.+|+
T Consensus       243 ~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~l~~~g~  317 (357)
T 2zb4_A          243 SDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYK-----DKFEPGILQLSQWFKEGK  317 (357)
T ss_dssp             HHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGG-----GGHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhh-----HHHHHHHHHHHHHHHcCC
Confidence            8999999999999999987653211222         14567789999987653321     123456677999999999


Q ss_pred             cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          292 VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       292 l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++.+..+|+++++++|++.+.+++..||+|+++
T Consensus       318 l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  351 (357)
T 2zb4_A          318 LKIKETVINGLENMGAAFQSMMTGGNIGKQIVCI  351 (357)
T ss_dssp             CCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             CcCccceecCHHHHHHHHHHHHcCCCCceEEEEE
Confidence            9987777799999999999999988889999875

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=3.1e-50  Score=357.87  Aligned_cols=299  Identities=14%  Similarity=0.135  Sum_probs=259.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCC---CCCCCCceeEEEEEecCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA---SPYPGLECSGTILSVGKNVS   77 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~---p~~~G~e~~G~V~~vG~~~~   77 (325)
                      |||+++..+++  .+++++.|.|+|+++||+|||.++|||++|++.+.|.++. ..+   |.++|||++| |+++|++ +
T Consensus         1 MkA~~~~~~~~--~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~~p~v~G~E~~G-V~~vG~~-~   75 (357)
T 2b5w_A            1 MKAIAVKRGED--RPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGG-FPEGEDHLVLGHEAVG-VVVDPND-T   75 (357)
T ss_dssp             CEEEEEETTCS--SCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTT-SCTTCSEEECCSEEEE-EEEECTT-S
T ss_pred             CeEEEEeCCCC--ceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCC-CCCCCCCcccCceeEE-EEEECCC-C
Confidence            99999998876  3889999999999999999999999999999999997653 234   7899999999 9999999 9


Q ss_pred             CCCCCCEEEEE------c--------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHH
Q 020487           78 RWKVGDQVCAL------L--------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC  125 (325)
Q Consensus        78 ~~~~Gd~V~~~------~--------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~  125 (325)
                      +|++||+|++.      |                          .+|+|+||++++++.++++|++++ ++ ++++.+++
T Consensus        76 ~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~-aal~~~~~  153 (357)
T 2b5w_A           76 ELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-EL-GFLIEPIS  153 (357)
T ss_dssp             SCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TT-GGGHHHHH
T ss_pred             CCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hh-hhhhchHH
Confidence            99999999875      1                          259999999999999999999999 54 55888999


Q ss_pred             HHHHHHHhhcCCCCC------CEEEEEcCCchHHHHH-HHHH-HHCCCE-EEEEecChh---hHHHHHHcCCCEEEeCCC
Q 020487          126 TVWSTVFMTSHLSPG------ESFLVHGGSSGIGTFA-IQMG-KCQGVR-VFVTAGSEE---KLAVCKDLGADVCINYKT  193 (325)
Q Consensus       126 ~a~~~l~~~~~~~~~------~~vli~g~~g~~G~~~-~~~a-~~~g~~-v~~~~~~~~---~~~~~~~~g~~~~~~~~~  193 (325)
                      |||+++ +.+++++|      ++|||+|+ |++|+++ +|+| +.+|++ |++++++++   +++.++++|++++ +++.
T Consensus       154 ta~~al-~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~  230 (357)
T 2b5w_A          154 ITEKAL-EHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQ  230 (357)
T ss_dssp             HHHHHH-HHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTT
T ss_pred             HHHHHH-HhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCc
Confidence            999999 67788999      99999999 9999999 9999 999997 999999998   9999999999999 8887


Q ss_pred             chHHHHHHHHhCCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHH----HhhccEeeeccccccc
Q 020487          194 EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL----FAKRLTVQAAGLRSRS  268 (325)
Q Consensus       194 ~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~  268 (325)
                      .++.+ +.+. ++ ++|++|||+|.. .+..++++++++|+++.+|........++...+    +.+++++.++....  
T Consensus       231 ~~~~~-i~~~-~g-g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~--  305 (357)
T 2b5w_A          231 TPVED-VPDV-YE-QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSH--  305 (357)
T ss_dssp             SCGGG-HHHH-SC-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCC--
T ss_pred             cCHHH-HHHh-CC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccCC--
Confidence            77766 7777 55 899999999986 678899999999999999876533345666667    78999999876542  


Q ss_pred             chhHHHHHHHHHHHHHHHHHCC--c-cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          269 TENKALIVSEVEKNVWPAIAVG--K-VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~g--~-l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                              .+.++++++++.+|  + ++++++++|+++++++|++.+   +..+|+|++|
T Consensus       306 --------~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~  354 (357)
T 2b5w_A          306 --------VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEF  354 (357)
T ss_dssp             --------HHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEEC
T ss_pred             --------HHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEe
Confidence                    23455589999999  8 688889999999999999988   3468999875

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=7.3e-49  Score=349.91  Aligned_cols=305  Identities=21%  Similarity=0.280  Sum_probs=260.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      ||+..+...+.++.+++++.+.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus        15 mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~V~~~~   93 (366)
T 1yqd_A           15 VKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGF-SMYPLVPGHEIVGEVTEVGSKVKKVN   93 (366)
T ss_dssp             EEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSC-CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             eeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCC-CCCCEecccceEEEEEEECCCCCcCC
Confidence            66666666666666999999999999999999999999999999999987653 34688999999999999999999999


Q ss_pred             CCCEEEEE-----------------------------------cCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHH
Q 020487           81 VGDQVCAL-----------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC  125 (325)
Q Consensus        81 ~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~  125 (325)
                      +||+|+..                                   ..+|+|+||++++++.++++|+++++++|++++.++.
T Consensus        94 vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~  173 (366)
T 1yqd_A           94 VGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGI  173 (366)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHHH
T ss_pred             CCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhHH
Confidence            99999742                                   1468999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHH
Q 020487          126 TVWSTVFMTSHLS-PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEE  203 (325)
Q Consensus       126 ~a~~~l~~~~~~~-~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~  203 (325)
                      |||+++. ..+++ +|++|||+|+ |++|++++|+|+..|++|+++++++++++.++ ++|+++++++.+.   +.+.+.
T Consensus       174 ta~~al~-~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~---~~~~~~  248 (366)
T 1yqd_A          174 TVYSPLK-YFGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQ---EQMQAA  248 (366)
T ss_dssp             HHHHHHH-HTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCH---HHHHHT
T ss_pred             HHHHHHH-hcCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCH---HHHHHh
Confidence            9999985 45777 9999999997 99999999999999999999999999998877 8999999987763   344454


Q ss_pred             hCCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHH
Q 020487          204 TGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKN  282 (325)
Q Consensus       204 ~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  282 (325)
                      ++  ++|++|||+|.. .+..++++++++|+++.+|.... ...++...++.+++++.++.....          +.+++
T Consensus       249 ~~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~  315 (366)
T 1yqd_A          249 AG--TLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEK-PLELPAFSLIAGRKIVAGSGIGGM----------KETQE  315 (366)
T ss_dssp             TT--CEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSS-CEEECHHHHHTTTCEEEECCSCCH----------HHHHH
T ss_pred             hC--CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCC-CCCcCHHHHHhCCcEEEEecCCCH----------HHHHH
Confidence            43  799999999975 57888999999999999987654 234666778889999998765321          23444


Q ss_pred             HHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          283 VWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       283 ~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++++.+|++++.+ ++|+|+++++|++.+++++..||+|+++
T Consensus       316 ~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (366)
T 1yqd_A          316 MIDFAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDV  357 (366)
T ss_dssp             HHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECH
T ss_pred             HHHHHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEc
Confidence            88999999998876 7999999999999999988889999864

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.3e-49  Score=353.47  Aligned_cols=306  Identities=20%  Similarity=0.294  Sum_probs=260.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCC-CCe------EEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEec
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDE------VLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVG   73 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~-~~e------v~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG   73 (325)
                      |||+++..++.   +++++.|.|+|. ++|      |+|||.++|||++|++.+.|..+.  .+|.++|||++|+|+++|
T Consensus         3 Mka~~~~~~~~---l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~p~v~GhE~~G~V~~vG   77 (398)
T 1kol_A            3 NRGVVYLGSGK---VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA--QVGLVLGHEITGEVIEKG   77 (398)
T ss_dssp             EEEEEEEETTE---EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCC--CTTCBCCCCEEEEEEEEC
T ss_pred             cEEEEEecCCc---eEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCCC--CCCcccCcccEEEEEEEC
Confidence            89999987653   899999999996 898      999999999999999999986542  358899999999999999


Q ss_pred             CCCCCCCCCCEEEEE-------------------------------------cCCceeeeEEeecCC--ceeeCCCCCCH
Q 020487           74 KNVSRWKVGDQVCAL-------------------------------------LGGGGYAEKVAVPAG--QVLPVPSGVSL  114 (325)
Q Consensus        74 ~~~~~~~~Gd~V~~~-------------------------------------~~~g~~~~~~~~~~~--~~~~~p~~~~~  114 (325)
                      +++++|++||+|+..                                     ..+|+|+||++++++  .++++|+++++
T Consensus        78 ~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~~~  157 (398)
T 1kol_A           78 RDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKA  157 (398)
T ss_dssp             TTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHH
T ss_pred             CCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCCcch
Confidence            999999999999741                                     124899999999987  89999999998


Q ss_pred             Hh----hccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEE
Q 020487          115 KD----AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI  189 (325)
Q Consensus       115 ~~----aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  189 (325)
                      ++    +++++.++.|||+++. .+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++ ++
T Consensus       158 ~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i  234 (398)
T 1kol_A          158 MEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE-IA  234 (398)
T ss_dssp             HHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE-EE
T ss_pred             hhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc-EE
Confidence            87    7889999999999994 789999999999996 9999999999999999 799999999999999999997 67


Q ss_pred             eCCCch-HHHHHHHHhCCCcccEEEeCCChH----------------HHHHhhccccCCCEEEEEeccC-Cc--------
Q 020487          190 NYKTED-FVARVKEETGGKGVDVILDCMGAS----------------YFQRNLGSLNIDGRLFIIGTQG-GA--------  243 (325)
Q Consensus       190 ~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~----------------~~~~~~~~l~~~g~~v~~g~~~-~~--------  243 (325)
                      +++... +.+.+++.+++.++|++|||+|..                .+..++++++++|+++.+|... +.        
T Consensus       235 ~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~  314 (398)
T 1kol_A          235 DLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAA  314 (398)
T ss_dssp             ETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHH
T ss_pred             ccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCccccccccc
Confidence            776544 778888888888999999999975                5788899999999999998652 11        


Q ss_pred             ---ccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccc---cccccccchhhHHHHHHHHHhCCC
Q 020487          244 ---KTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK---PVIYKYLPLCEAAEAHQLMESSQH  317 (325)
Q Consensus       244 ---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~---~~~~~~~~l~~~~~a~~~~~~~~~  317 (325)
                         ...++...++.+++++.+....          ..+.++.+++++.+|+++   ++++++|+|+++++|++.+.+++.
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~g~~~~----------~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~~~~  384 (398)
T 1kol_A          315 KIGSLSIRFGLGWAKSHSFHTGQTP----------VMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVP  384 (398)
T ss_dssp             HTTCCCCCHHHHHHTTCEEEESSCC----------HHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHHTCS
T ss_pred             ccccccccHHHHhhcccEEEecccC----------hHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHhCCCc
Confidence               1234556677788888875321          122345588999999998   467899999999999999998887


Q ss_pred             ceeEEEeC
Q 020487          318 IGKIMLVP  325 (325)
Q Consensus       318 ~gkvvi~~  325 (325)
                       +|+|++|
T Consensus       385 -gKvvi~~  391 (398)
T 1kol_A          385 -KKFVIDP  391 (398)
T ss_dssp             -CEEEECT
T ss_pred             -eEEEEEe
Confidence             9999975

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=2.7e-50  Score=360.64  Aligned_cols=317  Identities=20%  Similarity=0.236  Sum_probs=265.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCC----------------------------
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP----------------------------   52 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~----------------------------   52 (325)
                      |||++....  +..+++++.+.|+|+++||+|||.+++||++|++.+.|..+                            
T Consensus         8 mka~v~~~~--~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~~   85 (379)
T 3iup_A            8 LRSRIKSSG--ELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSMA   85 (379)
T ss_dssp             EEEEECTTS--EEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHHG
T ss_pred             HHHHHhcCC--CCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccccccc
Confidence            788876532  24599999999999999999999999999999999988631                            


Q ss_pred             CCCCCCCCCCCceeEEEEEecCCC-CCCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHH
Q 020487           53 PPKGASPYPGLECSGTILSVGKNV-SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (325)
Q Consensus        53 ~~~~~p~~~G~e~~G~V~~vG~~~-~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l  131 (325)
                      ....+|.++|||++|+|+++|+++ ++|++||+|++.. +|+|+||++++++.++++|+++++++|++++...+|||.++
T Consensus        86 ~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~-~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~  164 (379)
T 3iup_A           86 GRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG-GAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMV  164 (379)
T ss_dssp             GGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC-SCCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHH
T ss_pred             cccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC-CCcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHH
Confidence            012457899999999999999999 8899999999875 59999999999999999999999999999999999999877


Q ss_pred             HhhcCCCCCCEEEEEc-CCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487          132 FMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       132 ~~~~~~~~~~~vli~g-~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      .. .. ++|++|||+| ++|++|++++|+|+..|++|+++++++++++.++++|++++++++..++.+.+++.++++++|
T Consensus       165 ~~-~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~v~~~t~~~g~d  242 (379)
T 3iup_A          165 ET-MR-LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEALVSTGAT  242 (379)
T ss_dssp             HH-HH-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETTSTTHHHHHHHHHHHHCCC
T ss_pred             HH-hc-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCCChHHHHHHHHHhcCCCce
Confidence            44 44 8999999996 679999999999999999999999999999999999999999999989999999998877899


Q ss_pred             EEEeCCChHH-HHHhhcccc-----CC-----------CEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHH
Q 020487          211 VILDCMGASY-FQRNLGSLN-----ID-----------GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA  273 (325)
Q Consensus       211 ~vi~~~g~~~-~~~~~~~l~-----~~-----------g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  273 (325)
                      ++|||+|+.. ...++++++     ++           |+++.+|.....  ..+...++.+++++.++.+..+.....+
T Consensus       243 ~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~--~~~~~~~~~~~~~i~g~~~~~~~~~~~~  320 (379)
T 3iup_A          243 IAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTS--PTEFNRNFGMAWGMGGWLLFPFLQKIGR  320 (379)
T ss_dssp             EEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEE--EEEECCCSCSCEEEEECCHHHHHHHHCH
T ss_pred             EEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCC--ccccccccccceEEEEEEeeeecccCCH
Confidence            9999999753 466666664     44           566665543322  2223344567888988876654333334


Q ss_pred             HHHHHHHHHHHHHHHCCccccccccccchhhH--HHHHHHHHhCCCceeEEEeC
Q 020487          274 LIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEA--AEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       274 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~--~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ..+++.++.+.+++.+ .+.++++++|+++++  ++|++.+.+++..||+|++|
T Consensus       321 ~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~  373 (379)
T 3iup_A          321 ERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLINP  373 (379)
T ss_dssp             HHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEET
T ss_pred             HHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcCCCCceEEEeC
Confidence            5566777778888888 588899999999999  99999999999999999986

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=4.2e-48  Score=373.71  Aligned_cols=310  Identities=26%  Similarity=0.396  Sum_probs=270.5

Q ss_pred             EEEEcCCCCCcceEEEeecC--CCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            3 AIVITQPGSPEVLQLQEVED--PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         3 a~~~~~~~~~~~l~~~~~~~--~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      .+.+..+|.++.|++++.+.  |+|+++||+|||.++|||++|++.+.|.++.    |.++|||++|+|+++|+++++|+
T Consensus       212 ~l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~~----~~~lG~E~aG~V~~vG~~V~~~~  287 (795)
T 3slk_A          212 RLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYPG----VASLGSEGAGVVVETGPGVTGLA  287 (795)
T ss_dssp             CEEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCSS----CCCSCCCEEEEEEEECSSCCSSC
T ss_pred             EEecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCCC----CccccceeEEEEEEeCCCCCcCC
Confidence            35567788888899998874  5689999999999999999999999998764    55799999999999999999999


Q ss_pred             CCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG  160 (325)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a  160 (325)
                      +||+|+++. +|+|++|++++++.++++|+++++++|+++++.++|||+++.+.+++++|++|||+|++|++|++++|+|
T Consensus       288 vGDrV~~~~-~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlA  366 (795)
T 3slk_A          288 PGDRVMGMI-PKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLA  366 (795)
T ss_dssp             TTCEEEECC-SSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHH
T ss_pred             CCCEEEEEe-cCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHH
Confidence            999999986 4999999999999999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEecc
Q 020487          161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      +..|++|++++.++ +.+.++ +|+++++++...++.+.+++.++++++|+||||+|++.+...+++++++|+++.+|..
T Consensus       367 k~~Ga~V~~t~~~~-k~~~l~-lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~l~~~Gr~v~iG~~  444 (795)
T 3slk_A          367 RHLGAEVYATASED-KWQAVE-LSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKT  444 (795)
T ss_dssp             HHTTCCEEEECCGG-GGGGSC-SCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECCCTTTTHHHHTSCTTCEEEEECCST
T ss_pred             HHcCCEEEEEeChH-Hhhhhh-cChhheeecCChhHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHhcCCCEEEEeccc
Confidence            99999999999665 555554 9999999999999999999999999999999999998889999999999999999865


Q ss_pred             CCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCcee
Q 020487          241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGK  320 (325)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gk  320 (325)
                      .... .... ....+++++.+..+.    ...+....+.++.+++++.+|++++++.++|+++++++|++.+.+++..||
T Consensus       445 ~~~~-~~~~-~~~~~~~~~~~~~l~----~~~~~~~~~~l~~~~~l~~~g~l~p~~~~~~~l~~~~eA~~~l~~g~~~GK  518 (795)
T 3slk_A          445 DVRD-PVEV-ADAHPGVSYQAFDTV----EAGPQRIGEMLHELVELFEGRVLEPLPVTAWDVRQAPEALRHLSQARHVGK  518 (795)
T ss_dssp             TCCC-HHHH-HHHSSSEEEEECCGG----GGHHHHHHHHHHHHHHHHHTTSCCCCCEEEEEGGGHHHHHHHHHHTCCCBE
T ss_pred             cccC-cccc-cccCCCCEEEEeecc----ccCHHHHHHHHHHHHHHHHcCCcCCCcceeEcHHHHHHHHHHHhcCCccce
Confidence            4321 1111 122366777666543    223345667788899999999999999999999999999999999999999


Q ss_pred             EEEeC
Q 020487          321 IMLVP  325 (325)
Q Consensus       321 vvi~~  325 (325)
                      +|+.+
T Consensus       519 vVl~~  523 (795)
T 3slk_A          519 LVLTM  523 (795)
T ss_dssp             EEEEC
T ss_pred             EEEec
Confidence            99874

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=1.1e-45  Score=325.98  Aligned_cols=310  Identities=18%  Similarity=0.237  Sum_probs=260.4

Q ss_pred             CEEEEEcCC--CC--CcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCC
Q 020487            1 MKAIVITQP--GS--PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV   76 (325)
Q Consensus         1 m~a~~~~~~--~~--~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~   76 (325)
                      ||++++...  |.  ++.+++++.+.|+|+++||+|||.++|||+.|+.. .+    ...+|.++|||++|+|++.  ++
T Consensus         8 mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~~----~~~~p~~~g~e~~G~Vv~~--~v   80 (333)
T 1v3u_A            8 AKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-SK----RLKEGAVMMGQQVARVVES--KN   80 (333)
T ss_dssp             EEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-TT----TCCTTSBCCCCEEEEEEEE--SC
T ss_pred             ccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-cC----cCCCCcccccceEEEEEec--CC
Confidence            799999875  43  36799999999999999999999999999998732 21    1234778999999999995  57


Q ss_pred             CCCCCCCEEEEEcCCceeeeEEeecCCceeeCCCC----CCHHh-hccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCch
Q 020487           77 SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSG----VSLKD-AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG  151 (325)
Q Consensus        77 ~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~----~~~~~-aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~  151 (325)
                      ++|++||+|++.   |+|++|++++++.++++|++    +++++ +++++++++|||+++.+..++++|++++|+|++|+
T Consensus        81 ~~~~vGdrV~~~---g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~gg  157 (333)
T 1v3u_A           81 SAFPAGSIVLAQ---SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGA  157 (333)
T ss_dssp             TTSCTTCEEEEC---CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBH
T ss_pred             CCCCCCCEEEec---CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCc
Confidence            889999999986   88999999999999999997    88887 58899999999999988889999999999999999


Q ss_pred             HHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCC-chHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccC
Q 020487          152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI  230 (325)
Q Consensus       152 ~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~  230 (325)
                      +|++++++++..|++|+++++++++.+.++++|++.++|..+ .++.+.+.+.++ .++|++|||+|...+..+++++++
T Consensus       158 iG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~-~~~d~vi~~~g~~~~~~~~~~l~~  236 (333)
T 1v3u_A          158 VGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASP-DGYDCYFDNVGGEFLNTVLSQMKD  236 (333)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCT-TCEEEEEESSCHHHHHHHHTTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhC-CCCeEEEECCChHHHHHHHHHHhc
Confidence            999999999999999999999999999889999998888877 777777777776 489999999999888899999999


Q ss_pred             CCEEEEEeccCCc-----c-cccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhh
Q 020487          231 DGRLFIIGTQGGA-----K-TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCE  304 (325)
Q Consensus       231 ~g~~v~~g~~~~~-----~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~  304 (325)
                      +|+++.+|.....     . ...+...++.+++++.|+.......    ....+.++++++++.+|++++.+...+++++
T Consensus       237 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~----~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~  312 (333)
T 1v3u_A          237 FGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQG----DVREKALRDLMKWVLEGKIQYHEHVTKGFEN  312 (333)
T ss_dssp             EEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCT----HHHHHHHHHHHHHHHTTSSCCCEEEEECGGG
T ss_pred             CCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcch----HHHHHHHHHHHHHHHCCCccCccccccCHHH
Confidence            9999999876531     1 1135566778999999986543321    2234566779999999999987767789999


Q ss_pred             HHHHHHHHHhCCCceeEEEeC
Q 020487          305 AAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       305 ~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      +++|++.+++++..||+|+++
T Consensus       313 ~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          313 MPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             HHHHHHHHHTTCCSBEEEEEC
T ss_pred             HHHHHHHHHcCCCCceEEEeC
Confidence            999999999988889999875

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=1.7e-47  Score=341.41  Aligned_cols=301  Identities=17%  Similarity=0.211  Sum_probs=252.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCC-CeEEEEEeeeecChhhhhhhhC--CCCCCCCC---CCCCCCceeEEEEEecC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKG--SYPPPKGA---SPYPGLECSGTILSVGK   74 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~-~ev~v~v~~~~i~~~D~~~~~g--~~~~~~~~---p~~~G~e~~G~V~~vG~   74 (325)
                      |||+++..++++  +++++.|.|+|++ +||+|||.++|||++|++.+.|  .++. ..+   |.++|||++|+|++  +
T Consensus         1 MkA~~~~~~g~~--l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~~~~~p~v~G~E~~G~V~~--~   75 (366)
T 2cdc_A            1 MKAIIVKPPNAG--VQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLST-LPKGKDFLVLGHEAIGVVEE--S   75 (366)
T ss_dssp             CEEEEECTTSCC--CEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC--------CCSCEECCSEEEEEECS--C
T ss_pred             CeEEEEeCCCCc--eEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCC-CCcCCCCCcCCcceEEEEEe--C
Confidence            999999988863  8899999999999 9999999999999999999998  5542 234   78999999999999  7


Q ss_pred             CCCCCCCCCEEEEEc------------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchH
Q 020487           75 NVSRWKVGDQVCALL------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVA  124 (325)
Q Consensus        75 ~~~~~~~Gd~V~~~~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~  124 (325)
                      + ++|++||+|++..                              .+|+|+||++++++.++++|++++ ++|+ ++.++
T Consensus        76 ~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aa-l~~~~  152 (366)
T 2cdc_A           76 Y-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGI-LAQPL  152 (366)
T ss_dssp             C-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGG-GHHHH
T ss_pred             C-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhh-hcCcH
Confidence            7 8899999998631                              369999999999999999999999 7764 78899


Q ss_pred             HHHHHHHH--h--hcCCC--C-------CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh---hhHHHHHHcCCCEE
Q 020487          125 CTVWSTVF--M--TSHLS--P-------GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---EKLAVCKDLGADVC  188 (325)
Q Consensus       125 ~~a~~~l~--~--~~~~~--~-------~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~---~~~~~~~~~g~~~~  188 (325)
                      .|||+++.  +  ..+++  +       |++|||+|+ |++|++++|+++..|++|+++++++   ++.+.++++|++.+
T Consensus       153 ~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v  231 (366)
T 2cdc_A          153 ADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY  231 (366)
T ss_dssp             HHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE
T ss_pred             HHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee
Confidence            99999996  4  77888  8       999999999 9999999999999999999999998   88899999999888


Q ss_pred             EeCCCchHHHHHHHHhCCCcccEEEeCCChH-HH-HHhhccccCCCEEEEEeccCCcccccchHH---HHhhccEeeecc
Q 020487          189 INYKTEDFVARVKEETGGKGVDVILDCMGAS-YF-QRNLGSLNIDGRLFIIGTQGGAKTELNITS---LFAKRLTVQAAG  263 (325)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~-~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~---~~~~~~~i~~~~  263 (325)
                       + .. ++.+.+.+ ++ .++|++|||+|.. .+ ..+++.|+++|+++.+|........++...   ++.+++++.|+.
T Consensus       232 -~-~~-~~~~~~~~-~~-~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~  306 (366)
T 2cdc_A          232 -N-SS-NGYDKLKD-SV-GKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLV  306 (366)
T ss_dssp             -E-CT-TCSHHHHH-HH-CCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCEEEECC
T ss_pred             -c-hH-HHHHHHHH-hC-CCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcEEEEec
Confidence             7 55 65566666 54 5899999999985 67 889999999999999987654334566666   788999999875


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHCCc------cccccccccchhhHHHHHHHH-HhCCCceeEEEeC
Q 020487          264 LRSRSTENKALIVSEVEKNVWPAIAVGK------VKPVIYKYLPLCEAAEAHQLM-ESSQHIGKIMLVP  325 (325)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~------l~~~~~~~~~l~~~~~a~~~~-~~~~~~gkvvi~~  325 (325)
                      ...          .+.++++++++.+|+      ++++++++|+|+++++|++.+ .+++..+|+|+++
T Consensus       307 ~~~----------~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~  365 (366)
T 2cdc_A          307 NGQ----------KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILW  365 (366)
T ss_dssp             CCC----------HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEEC
T ss_pred             CCC----------HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEec
Confidence            431          133455889999998      567788999999999999994 3466688999875

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=4.3e-45  Score=323.71  Aligned_cols=314  Identities=22%  Similarity=0.271  Sum_probs=260.7

Q ss_pred             CEEEEEcCC--CCCc--ceEEE--eecCCC-CCCCeEEEEEeeeecChhhhhhhhCCCCCC---CCCCCCCCCceeEEEE
Q 020487            1 MKAIVITQP--GSPE--VLQLQ--EVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPPP---KGASPYPGLECSGTIL   70 (325)
Q Consensus         1 m~a~~~~~~--~~~~--~l~~~--~~~~~~-~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~---~~~p~~~G~e~~G~V~   70 (325)
                      ||++++...  +.+.  .++++  +.+.|. |+++||+|||.++|+++.|. ...|.....   ..+|.++|||++|+++
T Consensus         5 mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G~~~   83 (345)
T 2j3h_A            5 NKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQGYGV   83 (345)
T ss_dssp             EEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEEEEE
T ss_pred             ceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeecceE
Confidence            688888876  5555  68988  888886 89999999999999888775 444543211   1357899999999999


Q ss_pred             E--ecCCCCCCCCCCEEEEEcCCceeeeEEeecCCc--eeeCCC---CCCHHhhccCcchHHHHHHHHHhhcCCCCCCEE
Q 020487           71 S--VGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQ--VLPVPS---GVSLKDAAAFPEVACTVWSTVFMTSHLSPGESF  143 (325)
Q Consensus        71 ~--vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~--~~~~p~---~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~v  143 (325)
                      +  +|+++++|++||+|++.   |+|++|++++++.  ++++|+   +++++ +++++++++|||+++.+..++++|++|
T Consensus        84 ~GvV~~~v~~~~vGdrV~~~---g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~v  159 (345)
T 2j3h_A           84 SRIIESGHPDYKKGDLLWGI---VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETV  159 (345)
T ss_dssp             EEEEEECSTTCCTTCEEEEE---EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEE
T ss_pred             EEEEecCCCCCCCCCEEEee---cCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEE
Confidence            9  99999999999999987   8899999998876  999996   35555 678999999999999888899999999


Q ss_pred             EEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEEeCCC-chHHHHHHHHhCCCcccEEEeCCChHHH
Q 020487          144 LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASYF  221 (325)
Q Consensus       144 li~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~  221 (325)
                      ||+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|... .++.+.+.+.++ .++|++|||+|...+
T Consensus       160 lI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~-~~~d~vi~~~g~~~~  238 (345)
T 2j3h_A          160 YVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFP-NGIDIYFENVGGKML  238 (345)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCT-TCEEEEEESSCHHHH
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhC-CCCcEEEECCCHHHH
Confidence            99999999999999999999999999999999999998 799999888765 366667777665 589999999999888


Q ss_pred             HHhhccccCCCEEEEEeccCCc-----ccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccccc
Q 020487          222 QRNLGSLNIDGRLFIIGTQGGA-----KTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVI  296 (325)
Q Consensus       222 ~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~  296 (325)
                      ..++++++++|+++.+|.....     ...++...++.+++++.++......     ....+.++++++++.+|++++.+
T Consensus       239 ~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~l~~~g~i~~~~  313 (345)
T 2j3h_A          239 DAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFY-----DKYSKFLEFVLPHIREGKITYVE  313 (345)
T ss_dssp             HHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGG-----GGHHHHHHHHHHHHHTTSSCCCE
T ss_pred             HHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhh-----hhHHHHHHHHHHHHHCCCCcCcc
Confidence            8999999999999999875531     2235556777899999887554321     11345567799999999999877


Q ss_pred             ccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487          297 YKYLPLCEAAEAHQLMESSQHIGKIMLVP  325 (325)
Q Consensus       297 ~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  325 (325)
                      ..+|+|+++++|++.+++++..||+|+.+
T Consensus       314 ~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (345)
T 2j3h_A          314 DVADGLEKAPEALVGLFHGKNVGKQVVVV  342 (345)
T ss_dssp             EEEESGGGSHHHHHHHHTTCCSSEEEEES
T ss_pred             cccCCHHHHHHHHHHHHcCCCceEEEEEe
Confidence            78899999999999999999899999875

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=6.5e-37  Score=323.50  Aligned_cols=309  Identities=27%  Similarity=0.378  Sum_probs=259.6

Q ss_pred             EcCCCCCcceEEEeecCCC-CC--CCeEEEEEeeeecChhhhhhhhCCCCCC------CCCCCCCCCceeEEEEEecCCC
Q 020487            6 ITQPGSPEVLQLQEVEDPQ-IK--DDEVLIKVEATALNRADTLQRKGSYPPP------KGASPYPGLECSGTILSVGKNV   76 (325)
Q Consensus         6 ~~~~~~~~~l~~~~~~~~~-~~--~~ev~v~v~~~~i~~~D~~~~~g~~~~~------~~~p~~~G~e~~G~V~~vG~~~   76 (325)
                      ...+|..+.+.+.+.+... +.  ++||+|+|.++|+|++|+++..|..+..      ...|.++|+|++|+|       
T Consensus      1535 ~~~~g~l~sl~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V------- 1607 (2512)
T 2vz8_A         1535 VLSRGDLSSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD------- 1607 (2512)
T ss_dssp             ESSTTCTTSEEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE-------
T ss_pred             ccCCCCcCceEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE-------
Confidence            3455666778888776543 33  7999999999999999999999876532      123568999999987       


Q ss_pred             CCCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHH
Q 020487           77 SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFA  156 (325)
Q Consensus        77 ~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~  156 (325)
                         .+||+|+++..+|+|++|++++++.++++|+++++++||++++.++|||+++.+.+++++|++|||+|++|++|+++
T Consensus      1608 ---~vGdrV~g~~~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aA 1684 (2512)
T 2vz8_A         1608 ---ASGRRVMGMVPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAA 1684 (2512)
T ss_dssp             ---TTSCCEEEECSSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHH
T ss_pred             ---ccCCEEEEeecCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHH
Confidence               37999999988899999999999999999999999999999999999999998889999999999999999999999


Q ss_pred             HHHHHHCCCEEEEEecChhhHHHHHH----cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCC
Q 020487          157 IQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG  232 (325)
Q Consensus       157 ~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g  232 (325)
                      +|+|+..|++|++++.++++++.+++    +|+++++++...++.+.+.+.++++++|+||||++++.+...+++++++|
T Consensus      1685 iqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~G 1764 (2512)
T 2vz8_A         1685 IAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHG 1764 (2512)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEE
T ss_pred             HHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCc
Confidence            99999999999999999999998885    78899999998888899999998889999999999888999999999999


Q ss_pred             EEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHH
Q 020487          233 RLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLM  312 (325)
Q Consensus       233 ~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~  312 (325)
                      +++.+|.............++.+++++.++.+..... ..+..+++.++.+.+++.+|.+.++++++|+++++++|++.+
T Consensus      1765 r~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~-~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~l~ei~eA~~~l 1843 (2512)
T 2vz8_A         1765 RFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFE-EGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYM 1843 (2512)
T ss_dssp             EEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTS-SCCHHHHHHHHHHHHHHTTTCSCCCCEEEEESSTHHHHHHHH
T ss_pred             EEEEeecccccccCcccccccccCCcEEEeeHHHHhh-hCHHHHHHHHHHHHHHHHcCCcCCCcceEecHHHHHHHHHhh
Confidence            9999985432111112234556889998876654321 112345566666777788899999999999999999999999


Q ss_pred             HhCCCceeEEEeC
Q 020487          313 ESSQHIGKIMLVP  325 (325)
Q Consensus       313 ~~~~~~gkvvi~~  325 (325)
                      .+++..||+|+.+
T Consensus      1844 ~~g~~~GKvVi~~ 1856 (2512)
T 2vz8_A         1844 AQGKHIGKVVIQV 1856 (2512)
T ss_dssp             HTTCCSSEEEEEC
T ss_pred             hccCccceEEEEC
Confidence            9999999999864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.92  E-value=2.5e-24  Score=175.30  Aligned_cols=195  Identities=26%  Similarity=0.445  Sum_probs=146.2

Q ss_pred             CceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH
Q 020487          103 GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD  182 (325)
Q Consensus       103 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~  182 (325)
                      +.++++|++++++++++++.++.|||+++.+..++++|++++|+|++|++|++++++++..|++|+++++++++.+.+++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~   81 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR   81 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            46889999999999999999999999999777899999999999998999999999999999999999999998888888


Q ss_pred             cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCc-ccccchHHHHhhccEeee
Q 020487          183 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQA  261 (325)
Q Consensus       183 ~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~  261 (325)
                      +|++.+++....+..+.+.+.+++.++|+++||+|...+...+++++++|+++.+|..... ...++.. .+.+++++.+
T Consensus        82 ~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~  160 (198)
T 1pqw_A           82 LGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLA-ALAKSASFSV  160 (198)
T ss_dssp             TCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGTTTCEEEE
T ss_pred             cCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcCcCcCChh-HhcCCcEEEE
Confidence            9998888887777777888877766899999999988888999999999999999875521 1223332 2457788776


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHCCccccccccc
Q 020487          262 AGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKY  299 (325)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~  299 (325)
                      ..+. ...........+.++++++++.+|++++.+.++
T Consensus       161 ~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  197 (198)
T 1pqw_A          161 VDLD-LNLKLQPARYRQLLQHILQHVADGKLEVLPVTA  197 (198)
T ss_dssp             CCHH-HHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC-
T ss_pred             EehH-HhhccCHHHHHHHHHHHHHHHHcCCccCCCCCc
Confidence            5431 110001222356677799999999998866444

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=99.02  E-value=1.1e-09  Score=96.78  Aligned_cols=144  Identities=11%  Similarity=0.070  Sum_probs=98.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCE--EEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV--CINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +++|+|+|+ |.+|+++++.++.+|++|+++++++++.+.++++++..  +++.+...+    .+...  ++|++|+|++
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~DvVI~~~~  239 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEI----ETAVA--EADLLIGAVL  239 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHH----HHHHH--TCSEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHH----HHHHc--CCCEEEECCC
Confidence            489999999 99999999999999999999999999998888765443  333332222    22222  6899999997


Q ss_pred             hHH-------HHHhhccccCCCEEEEEeccCCc------ccccchHHHHhhccEeeeccc-ccccchhHHHHH-HHHHHH
Q 020487          218 ASY-------FQRNLGSLNIDGRLFIIGTQGGA------KTELNITSLFAKRLTVQAAGL-RSRSTENKALIV-SEVEKN  282 (325)
Q Consensus       218 ~~~-------~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~-~~~~~~  282 (325)
                      .+.       ....++.|+++|+++.++...+.      ...++...+..+++++.+... ...........+ ...++.
T Consensus       240 ~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~~~  319 (361)
T 1pjc_A          240 VPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLPY  319 (361)
T ss_dssp             CTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHHHH
Confidence            643       45678899999999999765432      223333334457788777532 222222122222 455677


Q ss_pred             HHHHHHCC
Q 020487          283 VWPAIAVG  290 (325)
Q Consensus       283 ~~~~~~~g  290 (325)
                      +++++.+|
T Consensus       320 l~~l~~~G  327 (361)
T 1pjc_A          320 VVKLANQG  327 (361)
T ss_dssp             HHHHHHHG
T ss_pred             HHHHHhCC
Confidence            88888777

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.88  E-value=2.9e-08  Score=87.83  Aligned_cols=146  Identities=15%  Similarity=0.179  Sum_probs=90.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      ++++++|+|+ |.+|..+++.++..|++|+++++++++.+.+++ +|.....+....   ..+.+...  ++|++++|++
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~---~~l~~~~~--~~DvVi~~~g  238 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATE---ANIKKSVQ--HADLLIGAVL  238 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCH---HHHHHHHH--HCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCH---HHHHHHHh--CCCEEEECCC
Confidence            3689999999 999999999999999999999999988887765 676533332222   12333332  6899999998


Q ss_pred             hHH-------HHHhhccccCCCEEEEEeccCCcc------cccchHHHHhhccEeeeccc-ccccchhHHHHH-HHHHHH
Q 020487          218 ASY-------FQRNLGSLNIDGRLFIIGTQGGAK------TELNITSLFAKRLTVQAAGL-RSRSTENKALIV-SEVEKN  282 (325)
Q Consensus       218 ~~~-------~~~~~~~l~~~g~~v~~g~~~~~~------~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~-~~~~~~  282 (325)
                      ...       ....++.|+++|+++.++...+..      .+.+...+..+++++.+... ...........+ .+.++.
T Consensus       239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~  318 (369)
T 2eez_A          239 VPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPY  318 (369)
T ss_dssp             -------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHH
T ss_pred             CCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHH
Confidence            643       467788999999999997654321      11222223346777766532 222222122222 445566


Q ss_pred             HHHHHHCC
Q 020487          283 VWPAIAVG  290 (325)
Q Consensus       283 ~~~~~~~g  290 (325)
                      +.+++.+|
T Consensus       319 l~~l~~~g  326 (369)
T 2eez_A          319 VLKLAEKG  326 (369)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHhcC
Confidence            77777666

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.81  E-value=3.2e-08  Score=87.73  Aligned_cols=146  Identities=12%  Similarity=0.106  Sum_probs=94.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      ++++|+|+|+ |.+|..+++.++.+|++|++++++.++.+.+++ +|+....+....   ..+.+...  ++|++++|++
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~---~~l~~~l~--~aDvVi~~~~  240 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSA---YELEGAVK--RADLVIGAVL  240 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCH---HHHHHHHH--HCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCH---HHHHHHHc--CCCEEEECCC
Confidence            5789999998 999999999999999999999999999888876 676532222121   12333332  6899999987


Q ss_pred             hHH-------HHHhhccccCCCEEEEEeccCC------cccccchHHHHhhccEeeecccc-cccchhHHHHH-HHHHHH
Q 020487          218 ASY-------FQRNLGSLNIDGRLFIIGTQGG------AKTELNITSLFAKRLTVQAAGLR-SRSTENKALIV-SEVEKN  282 (325)
Q Consensus       218 ~~~-------~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~-~~~~~~  282 (325)
                      .+.       ....++.|+++|.++.++...+      ++.+.+...+..+++++.+...- ..........+ ...++.
T Consensus       241 ~p~~~t~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~~as~~~~~~~~~~  320 (377)
T 2vhw_A          241 VPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNATMPY  320 (377)
T ss_dssp             CTTSCCCCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHHHHHHHHHHHHHHH
T ss_pred             cCCCCCcceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecCCcchhhHHHHHHHHHHHHHHH
Confidence            543       4677889999999999985433      12222222233467776655332 22222222222 233455


Q ss_pred             HHHHHHCC
Q 020487          283 VWPAIAVG  290 (325)
Q Consensus       283 ~~~~~~~g  290 (325)
                      +.+++.+|
T Consensus       321 ~~~l~~~g  328 (377)
T 2vhw_A          321 VLELADHG  328 (377)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHhCC
Confidence            66666555

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.69  E-value=3.6e-08  Score=87.69  Aligned_cols=123  Identities=15%  Similarity=0.160  Sum_probs=86.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEE-EeCCC---------------c----hHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKT---------------E----DFVA  198 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~---------------~----~~~~  198 (325)
                      ++.+|+|+|+ |.+|+++++.++.+|++|++.+++.++.+.++++|++.+ ++...               .    ....
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            6899999998 999999999999999999999999999888888987654 12211               0    0122


Q ss_pred             HHHHHhCCCcccEEEeCC---ChHH----HHHhhccccCCCEEEEEeccCCccc--ccchHHHHhhccEeeeccc
Q 020487          199 RVKEETGGKGVDVILDCM---GASY----FQRNLGSLNIDGRLFIIGTQGGAKT--ELNITSLFAKRLTVQAAGL  264 (325)
Q Consensus       199 ~~~~~~~~~~~d~vi~~~---g~~~----~~~~~~~l~~~g~~v~~g~~~~~~~--~~~~~~~~~~~~~i~~~~~  264 (325)
                      .+.+...  ++|++|+|+   |.+.    ....++.|++++.++.++...+...  ..+...+..+++++.+...
T Consensus       250 ~l~~~~~--~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~  322 (384)
T 1l7d_A          250 AVLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTN  322 (384)
T ss_dssp             HHHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSS
T ss_pred             HHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeCC
Confidence            2445554  689999999   5322    2677889999999999985433221  1222334457788887643

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.59  E-value=1.2e-10  Score=104.31  Aligned_cols=171  Identities=15%  Similarity=0.219  Sum_probs=122.4

Q ss_pred             CCCCceeEEEEEecCCCCCCCCCCEEEE---------EcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHH
Q 020487           60 YPGLECSGTILSVGKNVSRWKVGDQVCA---------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST  130 (325)
Q Consensus        60 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~~---------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~  130 (325)
                      ..|++.++.|.++|+++..+.+|+.+..         ....|++++|+......++.+|+.++.+.++. ..+..++|.+
T Consensus        76 ~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~a  154 (404)
T 1gpj_A           76 KRGSEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSAA  154 (404)
T ss_dssp             EEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHHH
T ss_pred             ecCchHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHHH
Confidence            4789999999999999999999998621         11236788888777778888888877776553 4455677766


Q ss_pred             HHhhc---CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhH-HHHHHcCCCEEEeCCCchHHHHHHHHhC
Q 020487          131 VFMTS---HLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKL-AVCKDLGADVCINYKTEDFVARVKEETG  205 (325)
Q Consensus       131 l~~~~---~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~  205 (325)
                      +....   .-.+|++++|+|+ |.+|.++++.++..|+ +|+++.++.++. +.++++|++ +++.  .++    .+.. 
T Consensus       155 v~~a~~~~~~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~l----~~~l-  225 (404)
T 1gpj_A          155 VELAERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF--DEL----VDHL-  225 (404)
T ss_dssp             HHHHHHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG--GGH----HHHH-
T ss_pred             HHHHHHHhccccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-eecH--HhH----HHHh-
Confidence            53221   1247999999998 9999999999999999 999999998886 566778875 3332  122    2222 


Q ss_pred             CCcccEEEeCCChHH-H--HHhhcc--c--cCCCEEEEEeccC
Q 020487          206 GKGVDVILDCMGASY-F--QRNLGS--L--NIDGRLFIIGTQG  241 (325)
Q Consensus       206 ~~~~d~vi~~~g~~~-~--~~~~~~--l--~~~g~~v~~g~~~  241 (325)
                       .++|+|++|++... +  ...++.  +  ++++.++.++...
T Consensus       226 -~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~  267 (404)
T 1gpj_A          226 -ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN  267 (404)
T ss_dssp             -HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred             -cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence             26899999998643 1  133444  3  5577777776543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.56  E-value=4.5e-07  Score=80.86  Aligned_cols=122  Identities=17%  Similarity=0.198  Sum_probs=84.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEE-eCC-------------CchH----HHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-NYK-------------TEDF----VARV  200 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~-------------~~~~----~~~~  200 (325)
                      ++.+|+|+|+ |.+|+.++++++.+|++|++++++.++.+.++++|+..+. +..             ...+    ...+
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            4789999998 9999999999999999999999999998888888876431 110             0010    1124


Q ss_pred             HHHhCCCcccEEEeCCChH-----H--HHHhhccccCCCEEEEEeccCCcccccc--hH-HHHhhccEeeecc
Q 020487          201 KEETGGKGVDVILDCMGAS-----Y--FQRNLGSLNIDGRLFIIGTQGGAKTELN--IT-SLFAKRLTVQAAG  263 (325)
Q Consensus       201 ~~~~~~~~~d~vi~~~g~~-----~--~~~~~~~l~~~g~~v~~g~~~~~~~~~~--~~-~~~~~~~~i~~~~  263 (325)
                      .+...  ++|++|+|++.+     .  ....++.|++++.++.++...+...+..  .. .+..+++++.+..
T Consensus       250 ~e~~~--~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~  320 (401)
T 1x13_A          250 AAQAK--EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYT  320 (401)
T ss_dssp             HHHHH--HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCS
T ss_pred             HHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeC
Confidence            44443  589999995321     1  2567889999999999986433222221  11 1345788888764

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.53  E-value=1.4e-07  Score=85.71  Aligned_cols=164  Identities=17%  Similarity=0.128  Sum_probs=106.8

Q ss_pred             CceeEEEEEecCCCCCCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhc-CCCCCC
Q 020487           63 LECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS-HLSPGE  141 (325)
Q Consensus        63 ~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~-~~~~~~  141 (325)
                      .++.|+|+++|.++.++.      .+...|.+...+..-.+.+.+.   .- .   .+.....++|.++.+.. ...+|+
T Consensus       209 ~~i~GvveetgtGVd~l~------a~~~~Gilv~~~~~vn~sVae~---~~-r---~l~~~~~s~~~g~~r~~~~~l~Gk  275 (494)
T 3ce6_A          209 ESVKGVTEETTTGVLRLY------QFAAAGDLAFPAINVNDSVTKS---KF-D---NKYGTRHSLIDGINRGTDALIGGK  275 (494)
T ss_dssp             HHCCCEEECSHHHHHHHH------HHHHTTCCCSCEEECTTSHHHH---TT-H---HHHHHHHHHHHHHHHHHCCCCTTC
T ss_pred             cCeEEEEEEeCCChhHHH------HHHHcCCEEEecCCccHHHHHH---HH-h---hhhhhhhhhhHHHHhccCCCCCcC
Confidence            689999999998877651      1111233322222111122220   00 0   11122344555553322 267899


Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH-
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-  220 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-  220 (325)
                      +|+|+|. |.+|..+++.++.+|++|+++++++.+.+.++++|++ +.+     ..    +..  +++|+|++|++... 
T Consensus       276 tV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~-~~~-----l~----e~l--~~aDvVi~atgt~~~  342 (494)
T 3ce6_A          276 KVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFD-VVT-----VE----EAI--GDADIVVTATGNKDI  342 (494)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECC-----HH----HHG--GGCSEEEECSSSSCS
T ss_pred             EEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCE-Eec-----HH----HHH--hCCCEEEECCCCHHH
Confidence            9999998 9999999999999999999999999988888888885 321     11    222  36899999998755 


Q ss_pred             H-HHhhccccCCCEEEEEeccCCcccccchHHHHhh
Q 020487          221 F-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK  255 (325)
Q Consensus       221 ~-~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~  255 (325)
                      + ...++.|+++|+++.+|....   .++...+..+
T Consensus       343 i~~~~l~~mk~ggilvnvG~~~~---eId~~aL~~~  375 (494)
T 3ce6_A          343 IMLEHIKAMKDHAILGNIGHFDN---EIDMAGLERS  375 (494)
T ss_dssp             BCHHHHHHSCTTCEEEECSSSGG---GBCHHHHHHT
T ss_pred             HHHHHHHhcCCCcEEEEeCCCCC---ccCHHHHHHh
Confidence            3 367888999999999976432   3555555543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.40  E-value=1.1e-06  Score=77.47  Aligned_cols=122  Identities=16%  Similarity=0.108  Sum_probs=84.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeC-------------CC---ch----HHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-------------KT---ED----FVA  198 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-------------~~---~~----~~~  198 (325)
                      ++.+|+|+|+ |.+|+.+++.++.+|++|++.+++..+++.++++|++.+...             ..   ..    ...
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            5789999998 999999999999999999999999999999998887532110             00   00    122


Q ss_pred             HHHHHhCCCcccEEEeCCChH-------HHHHhhccccCCCEEEEEeccCCccccc--chHHHHhhccEeeecc
Q 020487          199 RVKEETGGKGVDVILDCMGAS-------YFQRNLGSLNIDGRLFIIGTQGGAKTEL--NITSLFAKRLTVQAAG  263 (325)
Q Consensus       199 ~~~~~~~~~~~d~vi~~~g~~-------~~~~~~~~l~~~g~~v~~g~~~~~~~~~--~~~~~~~~~~~i~~~~  263 (325)
                      .+.+...  ++|+||.|+..+       .....++.|++++.+|.++...+.....  +...+..+++++.+..
T Consensus       268 ~l~e~l~--~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~  339 (405)
T 4dio_A          268 LVAEHIA--KQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHL  339 (405)
T ss_dssp             HHHHHHH--TCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEEEECS
T ss_pred             HHHHHhc--CCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEEEEeC
Confidence            3444443  689999996321       1367889999999999997533322111  1112234677777663

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.39  E-value=1e-06  Score=77.12  Aligned_cols=151  Identities=12%  Similarity=0.049  Sum_probs=97.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeC---------CC-------chHHHHHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY---------KT-------EDFVARVKE  202 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~---------~~-------~~~~~~~~~  202 (325)
                      ++.+|+|+|+ |.+|..+++.++.+|++|++.+++.++.+.++++|++.+...         ..       ......+.+
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            5789999998 999999999999999999999999999999999887533100         00       011234444


Q ss_pred             HhCCCcccEEEeCCChH-------HHHHhhccccCCCEEEEEeccCCcccc--cchHHHHhhccEeeec-ccccccchhH
Q 020487          203 ETGGKGVDVILDCMGAS-------YFQRNLGSLNIDGRLFIIGTQGGAKTE--LNITSLFAKRLTVQAA-GLRSRSTENK  272 (325)
Q Consensus       203 ~~~~~~~d~vi~~~g~~-------~~~~~~~~l~~~g~~v~~g~~~~~~~~--~~~~~~~~~~~~i~~~-~~~~~~~~~~  272 (325)
                      ...  .+|+||.|+..+       .....++.|++++.+|.++...+....  .+...+..+++++.+. ++......+.
T Consensus       262 ~l~--~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~~~~~~~~~gV~~~~v~nlP~~vp~tA  339 (381)
T 3p2y_A          262 AIT--KFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEPGRTIVHHGVTITSPLNLPATMPEHA  339 (381)
T ss_dssp             HHT--TCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTCEEEETTEEEECCSCTGGGSHHHH
T ss_pred             HHh--cCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccccccCCCeEEECCEEEEeeCCCchhhHHHH
Confidence            443  689999986321       136788999999999999765443221  1111123356777665 3444444444


Q ss_pred             HHHHHHHHH-HHHHHHHCCcc
Q 020487          273 ALIVSEVEK-NVWPAIAVGKV  292 (325)
Q Consensus       273 ~~~~~~~~~-~~~~~~~~g~l  292 (325)
                      ...+.+.+- .+..++.+|.+
T Consensus       340 S~~~s~~l~~~l~~~~~~g~~  360 (381)
T 3p2y_A          340 SELYAKNVTALLDLLLTDDGV  360 (381)
T ss_dssp             HHHHHHHHHHHHHHHEETTEE
T ss_pred             HHHHHHHHHHHHHHHhhCCCc
Confidence            454444333 33333444544

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.21  E-value=3.4e-05  Score=64.84  Aligned_cols=102  Identities=25%  Similarity=0.426  Sum_probs=74.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH-HHcCCCE-EE--eCCCch----HHHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADV-CI--NYKTED----FVARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~-~~--~~~~~~----~~~~~~~~~~~~~~d  210 (325)
                      .|+++||+|+++++|.++++.+...|++|+++.+++++.+.+ ++++... .+  |-.+..    ..+.+.+..|  ++|
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G--~iD  105 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAG--RID  105 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS--CEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcC--CCC
Confidence            488999999999999999999999999999999999887654 4666542 22  333322    2334444555  699


Q ss_pred             EEEeCCChH--------------------------HHHHhhccccCCCEEEEEeccCC
Q 020487          211 VILDCMGAS--------------------------YFQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       211 ~vi~~~g~~--------------------------~~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                      ++++++|..                          ..+.++..|+++|++|.+++..+
T Consensus       106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~  163 (273)
T 4fgs_A          106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAG  163 (273)
T ss_dssp             EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhh
Confidence            999998741                          12355678888999999876553

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.20  E-value=1.9e-06  Score=71.58  Aligned_cols=98  Identities=12%  Similarity=0.105  Sum_probs=71.7

Q ss_pred             HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCC-C--EEEeCCCchHHHHHHHHh
Q 020487          132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA-D--VCINYKTEDFVARVKEET  204 (325)
Q Consensus       132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~-~--~~~~~~~~~~~~~~~~~~  204 (325)
                      .....+.++++||..|+ | .|..+..+++. +.+|++++.+++..+.+++    .+. .  .++..+...       ..
T Consensus        84 ~~~~~~~~~~~vldiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-------~~  153 (248)
T 2yvl_A           84 ALKLNLNKEKRVLEFGT-G-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKD-------AE  153 (248)
T ss_dssp             HHHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTT-------SC
T ss_pred             HHhcCCCCCCEEEEeCC-C-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhh-------cc
Confidence            35667889999999998 5 58888999988 8899999999998877764    332 1  222222111       12


Q ss_pred             -CCCcccEEEeCCChH--HHHHhhccccCCCEEEEEec
Q 020487          205 -GGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       205 -~~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g~  239 (325)
                       ....+|+|+.+.+..  .+..+.+.|+++|+++....
T Consensus       154 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          154 VPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             CCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             cCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence             234799999987753  46888899999999998754

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.02  E-value=3.4e-06  Score=63.96  Aligned_cols=93  Identities=13%  Similarity=0.113  Sum_probs=66.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHH-HHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV-CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      ..+.+++|+|+ |.+|..+++.+...|++|++..++.++.+. .++++.. +.....  ..+.+      .++|+|+.|+
T Consensus        19 ~~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~-~~~~~~--~~~~~------~~~Divi~at   88 (144)
T 3oj0_A           19 NGGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYE-YVLIND--IDSLI------KNNDVIITAT   88 (144)
T ss_dssp             HCCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCE-EEECSC--HHHHH------HTCSEEEECS
T ss_pred             ccCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCc-eEeecC--HHHHh------cCCCEEEEeC
Confidence            34899999998 999999999998899999999999888765 4566643 222222  22221      1589999999


Q ss_pred             ChHHHHHhhccccCCCEEEEEecc
Q 020487          217 GASYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       217 g~~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      +........+++++++.++.++.+
T Consensus        89 ~~~~~~~~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           89 SSKTPIVEERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             CCSSCSBCGGGCCTTCEEEECCSS
T ss_pred             CCCCcEeeHHHcCCCCEEEEccCC
Confidence            875422223678888888888754

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.89  E-value=0.0011  Score=55.45  Aligned_cols=78  Identities=28%  Similarity=0.400  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.++||+|++|.+|..+++.+...|++|++++++.++.+.+.    +.+... .+  |-.+...    .+.+.+..+  
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g--  105 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG--  105 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC--
Confidence            4789999999999999999999999999999999988765543    234322 22  3333222    222333344  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      .+|++++++|.
T Consensus       106 ~id~lv~~Ag~  116 (262)
T 3rkr_A          106 RCDVLVNNAGV  116 (262)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            68999999874

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.89  E-value=0.00013  Score=52.70  Aligned_cols=93  Identities=18%  Similarity=0.172  Sum_probs=64.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      +.+++|+|+ |.+|..+++.+...| .+|+++++++++.+.+...+...+. .+..+ ...+.+...  ++|++|+|++.
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~-~d~~~-~~~~~~~~~--~~d~vi~~~~~   79 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQ-VDAKD-EAGLAKALG--GFDAVISAAPF   79 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEE-CCTTC-HHHHHHHTT--TCSEEEECSCG
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEE-ecCCC-HHHHHHHHc--CCCEEEECCCc
Confidence            568999999 999999999999999 7999999999888877755554322 22222 234445443  68999999986


Q ss_pred             HHHHHhhcc-ccCCCEEEEE
Q 020487          219 SYFQRNLGS-LNIDGRLFII  237 (325)
Q Consensus       219 ~~~~~~~~~-l~~~g~~v~~  237 (325)
                      .......+. ...+-.++.+
T Consensus        80 ~~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           80 FLTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             GGHHHHHHHHHHTTCEEECC
T ss_pred             hhhHHHHHHHHHhCCCEEEe
Confidence            544333333 3444455443

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.85  E-value=0.00012  Score=61.07  Aligned_cols=102  Identities=21%  Similarity=0.320  Sum_probs=70.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE-EE--eCCCchH----HHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTEDF----VARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~~----~~~~~~~~~~~~~d  210 (325)
                      .+++++|+|+++.+|.++++.+...|++|+++++++++.+.+. +++... .+  |-.+...    .+.+.+..+  ++|
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~id   84 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLG--AID   84 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHS--SEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhC--CCC
Confidence            4789999999999999999999999999999999988876654 344322 22  3333222    223333444  699


Q ss_pred             EEEeCCChH-----------H---------------HHHhhccccCCCEEEEEeccCC
Q 020487          211 VILDCMGAS-----------Y---------------FQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       211 ~vi~~~g~~-----------~---------------~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                      +++++.|..           .               ++.++..++++|++|.+++...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~  142 (255)
T 4eso_A           85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD  142 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh
Confidence            999998631           0               1234456667899999876543

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.85  E-value=6.2e-05  Score=63.64  Aligned_cols=98  Identities=19%  Similarity=0.236  Sum_probs=72.0

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCCE--EEeCCCchHHHHHHHHhCC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV--CINYKTEDFVARVKEETGG  206 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~~~~  206 (325)
                      ..++++++++||.+|+ |+.|..++.+++..|++|++++.+++..+.+++    .|.+.  ++..+...+       . .
T Consensus       116 ~la~l~~g~rVLDIGc-G~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l-------~-d  186 (298)
T 3fpf_A          116 ALGRFRRGERAVFIGG-GPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI-------D-G  186 (298)
T ss_dssp             HHTTCCTTCEEEEECC-CSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG-------G-G
T ss_pred             HHcCCCCcCEEEEECC-CccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC-------C-C
Confidence            3467899999999998 766777777888889999999999998877764    34432  233332221       1 3


Q ss_pred             CcccEEEeCCCh----HHHHHhhccccCCCEEEEEec
Q 020487          207 KGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       207 ~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ..||+|+.+...    ..+..+.+.|+|||+++....
T Consensus       187 ~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~  223 (298)
T 3fpf_A          187 LEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY  223 (298)
T ss_dssp             CCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence            579999976543    346788899999999998753

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.82  E-value=0.00017  Score=59.66  Aligned_cols=77  Identities=19%  Similarity=0.199  Sum_probs=57.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCE-EE--eCCCch----HHHHHHHHhCCCcccEE
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CI--NYKTED----FVARVKEETGGKGVDVI  212 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~--~~~~~~----~~~~~~~~~~~~~~d~v  212 (325)
                      ++++||+|+++++|.++++.+...|++|+++++++++.+.+.+.+... .+  |-.+..    +.+.+.+..|  ++|++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g--~iDiL   79 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQ--RIDVL   79 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHS--CCCEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcC--CCCEE
Confidence            368999999999999999999999999999999998887776544432 22  322322    2333444555  69999


Q ss_pred             EeCCCh
Q 020487          213 LDCMGA  218 (325)
Q Consensus       213 i~~~g~  218 (325)
                      ++++|.
T Consensus        80 VNNAG~   85 (247)
T 3ged_A           80 VNNACR   85 (247)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999863

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.76  E-value=0.00011  Score=62.53  Aligned_cols=91  Identities=19%  Similarity=0.241  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      +|.+++|+|. |.+|..+++.++..|++|++..++.++.+.++++|+.. ++.  .    .+.+..  ..+|+|+.|++.
T Consensus       154 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-~~~--~----~l~~~l--~~aDvVi~~~p~  223 (293)
T 3d4o_A          154 HGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEP-FHI--S----KAAQEL--RDVDVCINTIPA  223 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEE-EEG--G----GHHHHT--TTCSEEEECCSS
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCee-cCh--h----hHHHHh--cCCCEEEECCCh
Confidence            5899999998 99999999999999999999999988777777777643 221  1    223333  268999999975


Q ss_pred             HHH-HHhhccccCCCEEEEEec
Q 020487          219 SYF-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 ~~~-~~~~~~l~~~g~~v~~g~  239 (325)
                      ..+ ...++.|++++.++.++.
T Consensus       224 ~~i~~~~l~~mk~~~~lin~ar  245 (293)
T 3d4o_A          224 LVVTANVLAEMPSHTFVIDLAS  245 (293)
T ss_dssp             CCBCHHHHHHSCTTCEEEECSS
T ss_pred             HHhCHHHHHhcCCCCEEEEecC
Confidence            432 345678999999999875

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.76  E-value=0.00014  Score=64.46  Aligned_cols=102  Identities=18%  Similarity=0.211  Sum_probs=75.0

Q ss_pred             HHHHHHhhcC-CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhC
Q 020487          127 VWSTVFMTSH-LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG  205 (325)
Q Consensus       127 a~~~l~~~~~-~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  205 (325)
                      .+.++.+... .-.|++++|.|. |.+|..+++.++.+|++|+++.+++.+...+...|+. +.+         +.+...
T Consensus       206 ~~~gi~rat~~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~-v~~---------Leeal~  274 (435)
T 3gvp_A          206 ILDGLKRTTDMMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFR-LVK---------LNEVIR  274 (435)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECC---------HHHHTT
T ss_pred             HHHHHHHhhCceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCE-ecc---------HHHHHh
Confidence            3344444333 347999999998 9999999999999999999999888776666666653 211         223333


Q ss_pred             CCcccEEEeCCChHH-H-HHhhccccCCCEEEEEeccC
Q 020487          206 GKGVDVILDCMGASY-F-QRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       206 ~~~~d~vi~~~g~~~-~-~~~~~~l~~~g~~v~~g~~~  241 (325)
                        ..|+++.|.|... + ...++.|++++.++.+|...
T Consensus       275 --~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~  310 (435)
T 3gvp_A          275 --QVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSN  310 (435)
T ss_dssp             --TCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTT
T ss_pred             --cCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCC
Confidence              6899999987654 3 46788999999999887544

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.75  E-value=0.00017  Score=55.22  Aligned_cols=81  Identities=12%  Similarity=0.224  Sum_probs=58.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      ...++.+++|+|+ |.+|..+++.++..|++|+++++++++.+.++ ..|.. ++..+..+ ...+.+ .+..++|++|.
T Consensus        15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~-~~~~d~~~-~~~l~~-~~~~~ad~Vi~   90 (155)
T 2g1u_A           15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGF-TVVGDAAE-FETLKE-CGMEKADMVFA   90 (155)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSE-EEESCTTS-HHHHHT-TTGGGCSEEEE
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCc-EEEecCCC-HHHHHH-cCcccCCEEEE
Confidence            3457889999998 99999999999999999999999988877666 55654 33333222 122222 22347999999


Q ss_pred             CCChHH
Q 020487          215 CMGASY  220 (325)
Q Consensus       215 ~~g~~~  220 (325)
                      |++...
T Consensus        91 ~~~~~~   96 (155)
T 2g1u_A           91 FTNDDS   96 (155)
T ss_dssp             CSSCHH
T ss_pred             EeCCcH
Confidence            999754

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.75  E-value=0.00022  Score=57.90  Aligned_cols=99  Identities=8%  Similarity=0.017  Sum_probs=66.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-HCCCEEEEEecChh-hHHHHHHcCCC-EEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEE-KLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~-~~g~~v~~~~~~~~-~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .+++|+|++|.+|..+++.+. ..|++|++++++++ +.+.+...+.. ..+..+-.+ .+.+.+...  ++|++|++.|
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~--~~d~vv~~ag   82 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQN-PGXLEQAVT--NAEVVFVGAM   82 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTC-HHHHHHHHT--TCSEEEESCC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCC-HHHHHHHHc--CCCEEEEcCC
Confidence            469999999999999999888 89999999999987 66555322222 233222222 334445443  6899999998


Q ss_pred             hHH--HHHhhccccC--CCEEEEEeccCC
Q 020487          218 ASY--FQRNLGSLNI--DGRLFIIGTQGG  242 (325)
Q Consensus       218 ~~~--~~~~~~~l~~--~g~~v~~g~~~~  242 (325)
                      ...  ...+++.++.  .+++|.++....
T Consensus        83 ~~n~~~~~~~~~~~~~~~~~iv~iSs~~~  111 (221)
T 3r6d_A           83 ESGSDMASIVKALSRXNIRRVIGVSMAGL  111 (221)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEEEEETTT
T ss_pred             CCChhHHHHHHHHHhcCCCeEEEEeecee
Confidence            522  3444555543  368988876553

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.71  E-value=0.00025  Score=60.06  Aligned_cols=102  Identities=25%  Similarity=0.377  Sum_probs=66.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh-HH----HHHHcCCCE-EE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LA----VCKDLGADV-CI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~-~~----~~~~~g~~~-~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++ .+    .+++.+... .+  |-.+...    .+.+.+..+ 
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-  106 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG-  106 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence            47899999999999999999999999999999987653 22    233445432 22  3222221    222333344 


Q ss_pred             CcccEEEeCCChH-----------H---------------HHHhhccccCCCEEEEEeccCC
Q 020487          207 KGVDVILDCMGAS-----------Y---------------FQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       207 ~~~d~vi~~~g~~-----------~---------------~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                       ++|+++++.|..           .               +..++..|+.+|++|.+++...
T Consensus       107 -~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  167 (283)
T 1g0o_A          107 -KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG  167 (283)
T ss_dssp             -CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred             -CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh
Confidence             689999998731           0               1233455566799999976543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.70  E-value=0.00018  Score=61.56  Aligned_cols=92  Identities=21%  Similarity=0.255  Sum_probs=70.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      ++.+++|+|+ |.+|..+++.++..|++|++.+++.++.+.+.++|.. .++.  .    .+.+..  +.+|+|+.+++.
T Consensus       156 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~-~~~~--~----~l~~~l--~~aDvVi~~~p~  225 (300)
T 2rir_A          156 HGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEMGLV-PFHT--D----ELKEHV--KDIDICINTIPS  225 (300)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCE-EEEG--G----GHHHHS--TTCSEEEECCSS
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCe-EEch--h----hHHHHh--hCCCEEEECCCh
Confidence            5889999998 9999999999999999999999998877766667653 3221  1    223333  268999999986


Q ss_pred             HHH-HHhhccccCCCEEEEEecc
Q 020487          219 SYF-QRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       219 ~~~-~~~~~~l~~~g~~v~~g~~  240 (325)
                      ..+ ...+..|++++.++.++..
T Consensus       226 ~~i~~~~~~~mk~g~~lin~a~g  248 (300)
T 2rir_A          226 MILNQTVLSSMTPKTLILDLASR  248 (300)
T ss_dssp             CCBCHHHHTTSCTTCEEEECSST
T ss_pred             hhhCHHHHHhCCCCCEEEEEeCC
Confidence            433 3457889999999998753

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.70  E-value=0.00039  Score=57.71  Aligned_cols=77  Identities=23%  Similarity=0.347  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCEE-E--eCCCch----HHHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC-I--NYKTED----FVARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~~-~--~~~~~~----~~~~~~~~~~~~  207 (325)
                      +|++++|+|+++++|.++++.+...|++|+++.+++++.+.+    ++.|.+.. +  |-.+..    +.+.+.+..|  
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G--   83 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS--   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence            488999999999999999999999999999999998876544    34555432 2  333322    2334444555  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|++++++|
T Consensus        84 ~iDiLVNNAG   93 (254)
T 4fn4_A           84 RIDVLCNNAG   93 (254)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            6999999987

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.69  E-value=0.00011  Score=60.39  Aligned_cols=99  Identities=15%  Similarity=0.207  Sum_probs=68.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .+.+|+|+|++|.+|..+++.+...|++|++++++.++.+.+...+...++..+-.   +.+.+..+  ++|++|.++|.
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~---~~~~~~~~--~~D~vi~~ag~   94 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE---EDFSHAFA--SIDAVVFAAGS   94 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT---SCCGGGGT--TCSEEEECCCC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH---HHHHHHHc--CCCEEEECCCC
Confidence            47899999999999999999999999999999999998887776665233322221   23333443  69999999984


Q ss_pred             HH--------------HHHhhcccc--CCCEEEEEeccCC
Q 020487          219 SY--------------FQRNLGSLN--IDGRLFIIGTQGG  242 (325)
Q Consensus       219 ~~--------------~~~~~~~l~--~~g~~v~~g~~~~  242 (325)
                      ..              ...+++.+.  ..+++|.++....
T Consensus        95 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  134 (236)
T 3e8x_A           95 GPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT  134 (236)
T ss_dssp             CTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             CCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence            21              122333332  2368998877554

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.67  E-value=0.00056  Score=51.25  Aligned_cols=95  Identities=9%  Similarity=0.076  Sum_probs=68.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      .++++|.|. |.+|..+++.++..|.+|+++++++++.+.+++.|...+. .+..+ . ...+..+-..+|.++.+++.+
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~-gd~~~-~-~~l~~a~i~~ad~vi~~~~~~   82 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVL-GNAAN-E-EIMQLAHLECAKWLILTIPNG   82 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEE-SCTTS-H-HHHHHTTGGGCSEEEECCSCH
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEE-CCCCC-H-HHHHhcCcccCCEEEEECCCh
Confidence            467999998 9999999999999999999999999999988887775433 22222 1 122333445789999999875


Q ss_pred             HH----HHhhccccCCCEEEEEe
Q 020487          220 YF----QRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       220 ~~----~~~~~~l~~~g~~v~~g  238 (325)
                      ..    ....+.+.++.+++...
T Consensus        83 ~~n~~~~~~a~~~~~~~~iiar~  105 (140)
T 3fwz_A           83 YEAGEIVASARAKNPDIEIIARA  105 (140)
T ss_dssp             HHHHHHHHHHHHHCSSSEEEEEE
T ss_pred             HHHHHHHHHHHHHCCCCeEEEEE
Confidence            42    23345566777777653

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.65  E-value=0.00048  Score=58.07  Aligned_cols=99  Identities=16%  Similarity=0.241  Sum_probs=69.7

Q ss_pred             HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHH----cCC-C--EEEeCCCchHHHHHHH
Q 020487          132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGA-D--VCINYKTEDFVARVKE  202 (325)
Q Consensus       132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~----~g~-~--~~~~~~~~~~~~~~~~  202 (325)
                      .....+.++++||-.|+ |. |..+..+++..  +.+|+.++.+++..+.+++    .+. +  .++..+...       
T Consensus       105 ~~~~~~~~~~~VLDiG~-G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------  175 (277)
T 1o54_A          105 AMMLDVKEGDRIIDTGV-GS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISE-------  175 (277)
T ss_dssp             HHHTTCCTTCEEEEECC-TT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGG-------
T ss_pred             HHHhCCCCCCEEEEECC-cC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH-------
Confidence            35667889999999997 54 88888889885  5699999999988776653    343 1  122221111       


Q ss_pred             HhCCCcccEEEeCCChH--HHHHhhccccCCCEEEEEec
Q 020487          203 ETGGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       203 ~~~~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ......||+|+......  .+..+.+.|+++|+++....
T Consensus       176 ~~~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  214 (277)
T 1o54_A          176 GFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP  214 (277)
T ss_dssp             CCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred             cccCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            12234699999876643  46788889999999998753

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.63  E-value=0.00071  Score=55.73  Aligned_cols=78  Identities=21%  Similarity=0.264  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhC-CCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETG-GKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~-~~~~d~vi~~~  216 (325)
                      ++.+++|+|++|.+|..+++.+...|++|++++++.++.+.+. ++....++..+-.+ .+.+.+... ..++|++|+++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~id~vi~~A   84 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGD-WEATERALGSVGPVDLLVNNA   84 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTC-HHHHHHHHTTCCCCCEEEECC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCC-HHHHHHHHHHcCCCCEEEECC
Confidence            4789999999999999999999999999999999987766543 33323344333222 223333332 23689999998


Q ss_pred             C
Q 020487          217 G  217 (325)
Q Consensus       217 g  217 (325)
                      |
T Consensus        85 g   85 (244)
T 3d3w_A           85 A   85 (244)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.63  E-value=0.00039  Score=56.21  Aligned_cols=92  Identities=17%  Similarity=0.259  Sum_probs=63.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH--
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS--  219 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~--  219 (325)
                      +|||+|++|.+|..+++.+...|++|++++++.++...+. .+. .++..+-.+...   +...  ++|+||.|+|..  
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~-~~~~~D~~d~~~---~~~~--~~d~vi~~ag~~~~   74 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDI-NILQKDIFDLTL---SDLS--DQNVVVDAYGISPD   74 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSS-EEEECCGGGCCH---HHHT--TCSEEEECCCSSTT
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCC-eEEeccccChhh---hhhc--CCCEEEECCcCCcc
Confidence            6999999999999999999999999999999987766543 233 333222211111   3333  689999999752  


Q ss_pred             -------HHHHhhccccC--CCEEEEEecc
Q 020487          220 -------YFQRNLGSLNI--DGRLFIIGTQ  240 (325)
Q Consensus       220 -------~~~~~~~~l~~--~g~~v~~g~~  240 (325)
                             ....+++.++.  .++++.+++.
T Consensus        75 ~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           75 EAEKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             TTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             ccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence                   23455555554  3688887654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.62  E-value=0.0013  Score=55.54  Aligned_cols=101  Identities=18%  Similarity=0.249  Sum_probs=66.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC------------hhhHHHH----HHcCCCE-EE--eCCCchH---
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS------------EEKLAVC----KDLGADV-CI--NYKTEDF---  196 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~------------~~~~~~~----~~~g~~~-~~--~~~~~~~---  196 (325)
                      .+.++||+|+++.+|.++++.+...|++|++++++            .++.+..    +..+... .+  |-.+...   
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            47899999999999999999999999999999876            4443332    2344332 22  3333222   


Q ss_pred             -HHHHHHHhCCCcccEEEeCCCh---------HH---------------HHHhhccccCCCEEEEEeccC
Q 020487          197 -VARVKEETGGKGVDVILDCMGA---------SY---------------FQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       197 -~~~~~~~~~~~~~d~vi~~~g~---------~~---------------~~~~~~~l~~~g~~v~~g~~~  241 (325)
                       .+.+.+..+  ++|+++++.|.         +.               +..++..+..+|++|.+++..
T Consensus        89 ~~~~~~~~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  156 (287)
T 3pxx_A           89 ELANAVAEFG--KLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVA  156 (287)
T ss_dssp             HHHHHHHHHS--CCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHH
T ss_pred             HHHHHHHHcC--CCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccch
Confidence             223333344  68999999873         10               234456677789999886543

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.62  E-value=0.001  Score=56.66  Aligned_cols=102  Identities=17%  Similarity=0.190  Sum_probs=68.3

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCEEE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g--~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .+.+++|+|++|  .+|.++++.+...|++|++++++++..+.++    +.+....+  |-.+...    .+.+.+..+ 
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g-  107 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG-  107 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence            478999999976  9999999999999999999999876544333    33443444  3333222    233333344 


Q ss_pred             CcccEEEeCCChH---------------H---------------HHHhhccccCCCEEEEEeccCC
Q 020487          207 KGVDVILDCMGAS---------------Y---------------FQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       207 ~~~d~vi~~~g~~---------------~---------------~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                       ++|++++++|..               .               +..++..+.++|++|.+++...
T Consensus       108 -~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~  172 (296)
T 3k31_A          108 -SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGA  172 (296)
T ss_dssp             -CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             -CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhh
Confidence             689999998731               0               1234456677899999876543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.62  E-value=0.00053  Score=56.78  Aligned_cols=77  Identities=22%  Similarity=0.392  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEE---eCCCch----HHHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI---NYKTED----FVARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~---~~~~~~----~~~~~~~~~~~~~~d  210 (325)
                      .+++++|+|+++.+|.++++.+...|++|++++++.++.+... +++.....   |-.+..    +.+.+.+..+  ++|
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~id   82 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTG--GID   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHS--CCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCC--CCC
Confidence            4789999999999999999999999999999999988776543 45544322   222222    2233334444  699


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      +++++.|
T Consensus        83 ~lv~nAg   89 (247)
T 3rwb_A           83 ILVNNAS   89 (247)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999988

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.61  E-value=0.0013  Score=55.27  Aligned_cols=101  Identities=21%  Similarity=0.316  Sum_probs=66.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-hhhHHH----HHHcCCCE-EE--eCCCch----HHHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAV----CKDLGADV-CI--NYKTED----FVARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~~g~~~-~~--~~~~~~----~~~~~~~~~~~  206 (325)
                      .+.++||+|+++.+|.++++.+...|++|+++.+. .+..+.    +++.+... .+  |-.+..    ..+.+.+..+ 
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-   95 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG-   95 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence            47899999999999999999999999999997754 333332    33445433 22  322322    2233333444 


Q ss_pred             CcccEEEeCCChH--------------------------HHHHhhccccCCCEEEEEeccC
Q 020487          207 KGVDVILDCMGAS--------------------------YFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       207 ~~~d~vi~~~g~~--------------------------~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                       ++|+++++.|..                          .+..++..|.++|++|.+++..
T Consensus        96 -~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           96 -HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             -CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             -CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence             689999998731                          0234456677799999997755

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.60  E-value=0.0013  Score=54.95  Aligned_cols=102  Identities=18%  Similarity=0.249  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCCch--HHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCC--CEEE--eCCCchH----HHHHHHHh
Q 020487          139 PGESFLVHGGSSG--IGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA--DVCI--NYKTEDF----VARVKEET  204 (325)
Q Consensus       139 ~~~~vli~g~~g~--~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~--~~~~--~~~~~~~----~~~~~~~~  204 (325)
                      .+.+++|+|++|.  +|.++++.+...|++|+++.++++..+.++    +.+.  -..+  |-.+...    .+.+.+..
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            4789999999955  999999999999999999998876544433    2332  1222  3333222    23333334


Q ss_pred             CCCcccEEEeCCChH------------------------------HHHHhhccccCCCEEEEEeccCC
Q 020487          205 GGKGVDVILDCMGAS------------------------------YFQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       205 ~~~~~d~vi~~~g~~------------------------------~~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                      +  .+|++++++|..                              .+..++..++++|++|.+++...
T Consensus        86 g--~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  151 (266)
T 3oig_A           86 G--VIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGG  151 (266)
T ss_dssp             S--CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             C--CeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccc
Confidence            4  689999988621                              11244566777899999976543

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.60  E-value=0.00035  Score=57.86  Aligned_cols=79  Identities=25%  Similarity=0.397  Sum_probs=56.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEE---eCCCchHHHHHHHHhCCCcccEEE
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI---NYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~---~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                      .+++++||+|+++.+|..+++.+...|++|++++++.++.+.+. ++.....+   |..+......+.+..  .++|+++
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li   89 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLDILV   89 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCSEEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCCEEE
Confidence            46889999999999999999999999999999999988876654 34433222   222222223333322  3699999


Q ss_pred             eCCCh
Q 020487          214 DCMGA  218 (325)
Q Consensus       214 ~~~g~  218 (325)
                      +++|.
T Consensus        90 ~~Ag~   94 (249)
T 3f9i_A           90 CNAGI   94 (249)
T ss_dssp             ECCC-
T ss_pred             ECCCC
Confidence            99883

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.59  E-value=0.0011  Score=56.36  Aligned_cols=101  Identities=17%  Similarity=0.262  Sum_probs=66.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH-HH----HHHcCCCE-EE--eCCCch----HHHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AV----CKDLGADV-CI--NYKTED----FVARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~-~~----~~~~g~~~-~~--~~~~~~----~~~~~~~~~~~  206 (325)
                      .++++||+|+++.+|.++++.+...|++|++++++.++. +.    .++.+... .+  |-.+..    +.+.+.+..+ 
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g-  124 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG-  124 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC-
Confidence            478999999999999999999999999999999876532 22    22344432 22  333322    2233333444 


Q ss_pred             CcccEEEeCCChH---------------------------HHHHhhccccCCCEEEEEeccC
Q 020487          207 KGVDVILDCMGAS---------------------------YFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       207 ~~~d~vi~~~g~~---------------------------~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                       ++|++++++|..                           .+..++..++++|++|.+++..
T Consensus       125 -~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~  185 (291)
T 3ijr_A          125 -SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIV  185 (291)
T ss_dssp             -SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTH
T ss_pred             -CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechH
Confidence             689999987621                           0224456677789999886543

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.59  E-value=0.00097  Score=52.37  Aligned_cols=94  Identities=19%  Similarity=0.106  Sum_probs=67.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEE-eCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +++++|+|+ |.+|..+++.++.. |.+|+++++++++.+.+++.|...+. |..+.   +.+.+.++-.++|+++.|++
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~---~~l~~~~~~~~ad~vi~~~~  114 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDP---DFWERILDTGHVKLVLLAMP  114 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCH---HHHHTBCSCCCCCEEEECCS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCH---HHHHhccCCCCCCEEEEeCC
Confidence            568999997 99999999999998 99999999999998888888876543 32222   22222214457999999998


Q ss_pred             hHHH----HHhhccccCCCEEEEE
Q 020487          218 ASYF----QRNLGSLNIDGRLFII  237 (325)
Q Consensus       218 ~~~~----~~~~~~l~~~g~~v~~  237 (325)
                      +...    ....+.+.+..+++..
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          115 HHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             SHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             ChHHHHHHHHHHHHHCCCCEEEEE
Confidence            6432    2334455666677765

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=97.59  E-value=0.00015  Score=59.05  Aligned_cols=88  Identities=19%  Similarity=0.227  Sum_probs=62.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .+++++|+|+++.+|.++++.+...|++|+++.++.+             .|-.+....+.+.+..+  ++|+++++.|.
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------~D~~~~~~v~~~~~~~g--~id~lv~nAg~   69 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-------------LDISDEKSVYHYFETIG--AFDHLIVTAGS   69 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------CCTTCHHHHHHHHHHHC--SEEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------cCCCCHHHHHHHHHHhC--CCCEEEECCCC
Confidence            3678999999999999999999999999999997754             23334333344444443  68999998873


Q ss_pred             H---------------------------HHHHhhccccCCCEEEEEeccC
Q 020487          219 S---------------------------YFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       219 ~---------------------------~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      .                           .++.++..++++|+++.+++..
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~  119 (223)
T 3uce_A           70 YAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGML  119 (223)
T ss_dssp             CCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGG
T ss_pred             CCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchh
Confidence            1                           1224455667789999987654

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.59  E-value=0.0001  Score=60.67  Aligned_cols=102  Identities=22%  Similarity=0.213  Sum_probs=70.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC-EEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .|++++|+|+++++|.++++.+...|++|+++.+++++.+....-... ...|-.+....+.+.+..+  ++|+++++.|
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g--~iDiLVNNAG   87 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALP--RLDVLVNNAG   87 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCS--CCSEEEECCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcC--CCCEEEECCC
Confidence            589999999999999999999999999999999987765432211111 1224444444555566665  6999999987


Q ss_pred             hH---------H---------------HHHhhcccc-CCCEEEEEeccCC
Q 020487          218 AS---------Y---------------FQRNLGSLN-IDGRLFIIGTQGG  242 (325)
Q Consensus       218 ~~---------~---------------~~~~~~~l~-~~g~~v~~g~~~~  242 (325)
                      ..         .               .+.++..|+ .+|++|.+++..+
T Consensus        88 i~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  137 (242)
T 4b79_A           88 ISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYS  137 (242)
T ss_dssp             CCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGG
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccc
Confidence            31         0               123334443 4799999976553

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.55  E-value=0.0019  Score=54.25  Aligned_cols=101  Identities=24%  Similarity=0.393  Sum_probs=66.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh-hhHHH----HHHcCCCE-EE--eCCCch----HHHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAV----CKDLGADV-CI--NYKTED----FVARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~-~~~~~----~~~~g~~~-~~--~~~~~~----~~~~~~~~~~~  206 (325)
                      .++++||+|+++.+|.++++.+...|++|+++.++. ++.+.    +++.+... .+  |-.+..    ..+.+.+..+ 
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g-  108 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG-  108 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC-
Confidence            478999999999999999999999999999986543 33332    23345432 22  323322    2233333444 


Q ss_pred             CcccEEEeCCChH--------------------------HHHHhhccccCCCEEEEEeccC
Q 020487          207 KGVDVILDCMGAS--------------------------YFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       207 ~~~d~vi~~~g~~--------------------------~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                       ++|++++++|..                          .+..++..|+++|++|.+++..
T Consensus       109 -~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~  168 (271)
T 3v2g_A          109 -GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNL  168 (271)
T ss_dssp             -CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGG
T ss_pred             -CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChh
Confidence             689999998730                          0223445677789999986643

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.55  E-value=0.00046  Score=57.32  Aligned_cols=78  Identities=23%  Similarity=0.290  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCEEE---eCCCchHH----HHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVCI---NYKTEDFV----ARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~~~---~~~~~~~~----~~~~~~~~~~  207 (325)
                      .|++++|+|+++++|.++++.+...|++|+++.+++++.+..    ++.|.+...   |-.+....    +.+.+..|  
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G--   85 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI--   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC--
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC--
Confidence            489999999999999999999999999999999998876543    344544322   22232222    22333333  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|++++++|.
T Consensus        86 ~iDiLVNNAG~   96 (255)
T 4g81_D           86 HVDILINNAGI   96 (255)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            69999999874

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.54  E-value=0.00016  Score=59.61  Aligned_cols=77  Identities=19%  Similarity=0.342  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh--hHHHHHHcCCCEE-E--eCCCchHHHHHHHHhCCCcccEEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KLAVCKDLGADVC-I--NYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~--~~~~~~~~g~~~~-~--~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                      .|++++|+|+++++|.++++.+...|++|+++.++..  ..+.+++.|.... +  |-.+..   .+.+.....++|+++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~---~v~~~~~~g~iDiLV   84 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPL---AAKDSFTDAGFDILV   84 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTT---TTTTSSTTTCCCEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHH---HHHHHHHhCCCCEEE
Confidence            3889999999999999999999999999999998753  3455566665432 2  222222   122222234799999


Q ss_pred             eCCCh
Q 020487          214 DCMGA  218 (325)
Q Consensus       214 ~~~g~  218 (325)
                      ++.|.
T Consensus        85 NNAGi   89 (247)
T 4hp8_A           85 NNAGI   89 (247)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99874

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.53  E-value=0.0011  Score=56.43  Aligned_cols=102  Identities=17%  Similarity=0.195  Sum_probs=66.7

Q ss_pred             CCCEEEEEcCCch--HHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCEEE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSG--IGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~--~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .+++++|+|++|.  +|.++++.+...|++|+++.++++..+.++    +.+....+  |-.+...    .+.+.+..+ 
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g-  108 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG-  108 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS-
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC-
Confidence            5789999999855  999999999999999999998865443332    23432333  3333222    223333333 


Q ss_pred             CcccEEEeCCChH------------------------------HHHHhhccccCCCEEEEEeccCC
Q 020487          207 KGVDVILDCMGAS------------------------------YFQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       207 ~~~d~vi~~~g~~------------------------------~~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                       ++|++++++|..                              .+..++..+.++|++|.+++...
T Consensus       109 -~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~  173 (293)
T 3grk_A          109 -KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA  173 (293)
T ss_dssp             -CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred             -CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence             699999998731                              01233455667899999876543

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.53  E-value=0.0019  Score=54.85  Aligned_cols=102  Identities=22%  Similarity=0.308  Sum_probs=67.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh--hHHH----HHHcCCCEEE---eCCCch----HHHHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KLAV----CKDLGADVCI---NYKTED----FVARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~--~~~~----~~~~g~~~~~---~~~~~~----~~~~~~~~~~  205 (325)
                      .+.++||+|+++.+|.++++.+...|++|+++.++.+  ..+.    .++.+....+   |-.+..    +.+.+.+..+
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999987632  2222    2334543322   222222    2233333444


Q ss_pred             CCcccEEEeCCChH---------------------------HHHHhhccccCCCEEEEEeccCC
Q 020487          206 GKGVDVILDCMGAS---------------------------YFQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       206 ~~~~d~vi~~~g~~---------------------------~~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                        ++|+++++.|..                           .+..++..+.++|++|.+++...
T Consensus       128 --~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~  189 (294)
T 3r3s_A          128 --GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA  189 (294)
T ss_dssp             --CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG
T ss_pred             --CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh
Confidence              689999998730                           01244566777899999876543

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.52  E-value=0.00048  Score=58.56  Aligned_cols=78  Identities=18%  Similarity=0.335  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE-EE--eCCCchHHHHHHHHhCCCcccEEEe
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      .|.+++|+|++|.+|.++++.+...|++|++++++.++.+.+. +++... .+  |-.+......+.+..  .++|++++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv~   92 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLIN   92 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEEE
Confidence            4789999999999999999999999999999999998877665 344322 22  333333333333333  36899999


Q ss_pred             CCCh
Q 020487          215 CMGA  218 (325)
Q Consensus       215 ~~g~  218 (325)
                      ++|.
T Consensus        93 nAg~   96 (291)
T 3rd5_A           93 NAGI   96 (291)
T ss_dssp             CCCC
T ss_pred             CCcC
Confidence            9873

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.52  E-value=0.00089  Score=59.45  Aligned_cols=106  Identities=19%  Similarity=0.163  Sum_probs=77.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+++|.|. |.+|..+++.++.+|++|+++++++.+...+...|....          .+.+...  ..|+++.+.++
T Consensus       210 ~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~----------sL~eal~--~ADVVilt~gt  276 (436)
T 3h9u_A          210 AGKTACVCGY-GDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVL----------LVEDVVE--EAHIFVTTTGN  276 (436)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC----------CHHHHTT--TCSEEEECSSC
T ss_pred             cCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeec----------CHHHHHh--hCCEEEECCCC
Confidence            6899999997 999999999999999999999988877766666665321          1233333  58999998876


Q ss_pred             HH-H-HHhhccccCCCEEEEEeccCCcccccchHHHHhhccEee
Q 020487          219 SY-F-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ  260 (325)
Q Consensus       219 ~~-~-~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~  260 (325)
                      .. + ...++.|+++..++.+|..   ...++...+.....+..
T Consensus       277 ~~iI~~e~l~~MK~gAIVINvgRg---~vEID~~~L~~~~~~~~  317 (436)
T 3h9u_A          277 DDIITSEHFPRMRDDAIVCNIGHF---DTEIQVAWLKANAKERV  317 (436)
T ss_dssp             SCSBCTTTGGGCCTTEEEEECSSS---GGGBCHHHHHHHCSEEE
T ss_pred             cCccCHHHHhhcCCCcEEEEeCCC---CCccCHHHHHhhcCceE
Confidence            44 2 4668889999998888632   23456666555444333

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.52  E-value=0.00023  Score=63.25  Aligned_cols=92  Identities=16%  Similarity=0.133  Sum_probs=70.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      .-.|++++|+|. |.+|..+++.++.+|++|+++.+++.+...+...|.. +.+         +.+...  ..|+++.|.
T Consensus       244 ~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~-vv~---------LeElL~--~ADIVv~at  310 (464)
T 3n58_A          244 MMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFE-VVT---------LDDAAS--TADIVVTTT  310 (464)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCE-ECC---------HHHHGG--GCSEEEECC
T ss_pred             cccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCce-ecc---------HHHHHh--hCCEEEECC
Confidence            347899999998 9999999999999999999999887765555556653 221         122232  689999998


Q ss_pred             ChHHH--HHhhccccCCCEEEEEeccC
Q 020487          217 GASYF--QRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       217 g~~~~--~~~~~~l~~~g~~v~~g~~~  241 (325)
                      ++..+  ...+..|++++.++.+|...
T Consensus       311 gt~~lI~~e~l~~MK~GAILINvGRgd  337 (464)
T 3n58_A          311 GNKDVITIDHMRKMKDMCIVGNIGHFD  337 (464)
T ss_dssp             SSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred             CCccccCHHHHhcCCCCeEEEEcCCCC
Confidence            86542  57788999999999887544

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.49  E-value=0.00091  Score=56.40  Aligned_cols=77  Identities=23%  Similarity=0.379  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE-EE--eCCCchH----HHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTEDF----VARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~~----~~~~~~~~~~~~~d  210 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++++++.++.+.+. +++... .+  |-.+...    .+.+.+..+  ++|
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~iD  103 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWG--RVD  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcC--CCC
Confidence            4789999999999999999999999999999999988776554 455432 22  3333222    233333344  689


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      ++++++|
T Consensus       104 ~lv~nAg  110 (277)
T 4dqx_A          104 VLVNNAG  110 (277)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999988

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.48  E-value=0.00044  Score=57.93  Aligned_cols=77  Identities=22%  Similarity=0.220  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEecChhhHHHH----HHcCCC-EEE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVC----KDLGAD-VCI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~-~g~~v~~~~~~~~~~~~~----~~~g~~-~~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .+.+++|+|++|.+|..+++.+.. .|++|++++++.++.+..    +..+.. ..+  |-.+...    .+.+.+..+ 
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g-   81 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG-   81 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC-
Confidence            468899999999999999998888 899999999987765433    222322 233  3233222    222223333 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|++|.++|
T Consensus        82 -~id~li~~Ag   91 (276)
T 1wma_A           82 -GLDVLVNNAG   91 (276)
T ss_dssp             -SEEEEEECCC
T ss_pred             -CCCEEEECCc
Confidence             6999999987

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.47  E-value=0.0016  Score=53.49  Aligned_cols=78  Identities=18%  Similarity=0.221  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhC-CCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETG-GKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-~~~~d~vi~~~  216 (325)
                      ++.+++|+|++|.+|..+++.+...|++|++++++.++.+.+.+ ......+..+-.+ .+.+.+... ..++|+++++.
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~id~vi~~A   84 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGD-WDATEKALGGIGPVDLLVNNA   84 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTC-HHHHHHHHTTCCCCSEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCC-HHHHHHHHHHcCCCCEEEECC
Confidence            46789999999999999999999999999999999877655443 3222333333222 223334332 23689999998


Q ss_pred             C
Q 020487          217 G  217 (325)
Q Consensus       217 g  217 (325)
                      |
T Consensus        85 g   85 (244)
T 1cyd_A           85 A   85 (244)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.47  E-value=0.00096  Score=56.38  Aligned_cols=77  Identities=26%  Similarity=0.414  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE-EE--eCCCch----HHHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTED----FVARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~----~~~~~~~~~~~~~~d  210 (325)
                      .+++++|+|+++.+|.++++.+...|++|+++.++.++.+.+. .++... .+  |-.+..    ..+.+.+..+  ++|
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~iD   81 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFG--KID   81 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC--CCC
Confidence            3789999999999999999999999999999999988876654 444332 22  323322    2233333444  689


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      +++++.|
T Consensus        82 ~lvnnAg   88 (281)
T 3zv4_A           82 TLIPNAG   88 (281)
T ss_dssp             EEECCCC
T ss_pred             EEEECCC
Confidence            9999987

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.46  E-value=0.00088  Score=56.12  Aligned_cols=78  Identities=29%  Similarity=0.437  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE-EE--eCCCchH----HHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTEDF----VARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~~----~~~~~~~~~~~~~d  210 (325)
                      .+.++||+|+++.+|.++++.+...|++|+++.++.++.+.+. +++... .+  |-.+...    .+.+.+..+  ++|
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~iD  103 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREME--GID  103 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHT--SCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcC--CCC
Confidence            4789999999999999999999999999999999988776543 455443 22  3233222    223333344  699


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      ++++++|.
T Consensus       104 ~lvnnAg~  111 (266)
T 3grp_A          104 ILVNNAGI  111 (266)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999883

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.46  E-value=0.00029  Score=63.59  Aligned_cols=90  Identities=18%  Similarity=0.169  Sum_probs=69.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      -.|++++|+|+ |.+|.++++.++..|++|+++++++.+...+...+++ +.+.  .       +.  ...+|+++++.|
T Consensus       263 L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~d-v~~l--e-------e~--~~~aDvVi~atG  329 (488)
T 3ond_A          263 IAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQ-VLTL--E-------DV--VSEADIFVTTTG  329 (488)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCG--G-------GT--TTTCSEEEECSS
T ss_pred             ccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCc-cCCH--H-------HH--HHhcCEEEeCCC
Confidence            36899999998 7999999999999999999999988887777666653 2211  1       11  126899999998


Q ss_pred             hHH-H-HHhhccccCCCEEEEEecc
Q 020487          218 ASY-F-QRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       218 ~~~-~-~~~~~~l~~~g~~v~~g~~  240 (325)
                      ... + ...++.+++++.++.+|..
T Consensus       330 ~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          330 NKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             CSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             ChhhhhHHHHHhcCCCeEEEEcCCC
Confidence            643 2 4468889999999888754

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.45  E-value=0.0011  Score=55.05  Aligned_cols=78  Identities=19%  Similarity=0.321  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----c--C--CCEEE--eCCCch----HHHHHHHHh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----L--G--ADVCI--NYKTED----FVARVKEET  204 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~--g--~~~~~--~~~~~~----~~~~~~~~~  204 (325)
                      .+.++||+|+++.+|.++++.+...|++|++++++.++.+.+.+    .  +  ....+  |-.+..    ..+.+.+..
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY   85 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence            46889999999999999999999899999999999887655432    1  2  12233  333322    223333344


Q ss_pred             CCCcccEEEeCCCh
Q 020487          205 GGKGVDVILDCMGA  218 (325)
Q Consensus       205 ~~~~~d~vi~~~g~  218 (325)
                      +  ++|++++++|.
T Consensus        86 g--~iD~lvnnAg~   97 (250)
T 3nyw_A           86 G--AVDILVNAAAM   97 (250)
T ss_dssp             C--CEEEEEECCCC
T ss_pred             C--CCCEEEECCCc
Confidence            4  69999999874

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.45  E-value=0.00054  Score=57.16  Aligned_cols=78  Identities=22%  Similarity=0.387  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE-EE--eCCCchH----HHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTEDF----VARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~~----~~~~~~~~~~~~~d  210 (325)
                      .++++||+|+++.+|.++++.+...|++|++++++.++.+... +++... .+  |-.+...    .+.+.+..+  ++|
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g--~id   84 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAG--GLD   84 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSS--SCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcC--CCC
Confidence            4789999999999999999999999999999999988766543 454432 22  3333222    223333333  699


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      ++++++|.
T Consensus        85 ~lv~~Ag~   92 (259)
T 4e6p_A           85 ILVNNAAL   92 (259)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999873

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.44  E-value=0.00091  Score=54.79  Aligned_cols=77  Identities=25%  Similarity=0.330  Sum_probs=53.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-----HcCCCE-EE--eCCCchHH----HHHHHHhCCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-----DLGADV-CI--NYKTEDFV----ARVKEETGGK  207 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-----~~g~~~-~~--~~~~~~~~----~~~~~~~~~~  207 (325)
                      +.+++|+|+++.+|.++++.+...|++|++++++.++.+.+.     ..+... .+  |-.+....    +.+.+..+  
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g--   79 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG--   79 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC--
Confidence            578999999999999999999999999999999988765442     234332 22  22222211    12223333  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|++++++|.
T Consensus        80 ~id~li~~Ag~   90 (235)
T 3l77_A           80 DVDVVVANAGL   90 (235)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            68999999873

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.44  E-value=0.0015  Score=53.85  Aligned_cols=76  Identities=20%  Similarity=0.308  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEE--eCCCchH----HHHHHHHhCCCcccE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI--NYKTEDF----VARVKEETGGKGVDV  211 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~--~~~~~~~----~~~~~~~~~~~~~d~  211 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++.+.+. +++. ..+  |-.+...    .+.+.+..+  ++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g--~id~   80 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGA-HPVVMDVADPASVERGFAEALAHLG--RLDG   80 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTC-EEEECCTTCHHHHHHHHHHHHHHHS--SCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC-EEEEecCCCHHHHHHHHHHHHHHcC--CCCE
Confidence            3678999999999999999999999999999999988766554 3453 333  3333222    222333343  6899


Q ss_pred             EEeCCC
Q 020487          212 ILDCMG  217 (325)
Q Consensus       212 vi~~~g  217 (325)
                      ++++.|
T Consensus        81 lvn~Ag   86 (245)
T 1uls_A           81 VVHYAG   86 (245)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.44  E-value=0.00077  Score=55.34  Aligned_cols=77  Identities=22%  Similarity=0.261  Sum_probs=54.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEE--eCCCchH----HHHHHHHhCCCcccE
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDF----VARVKEETGGKGVDV  211 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~----~~~~~~~~~~~~~d~  211 (325)
                      +.+++|+|+++.+|.+++..+...|++|++++++.++.+.+. +++.. ..+  |-.+...    .+.+.+..+  ++|+
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g--~id~   80 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGG--LPEL   80 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHC--SCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC--CCcE
Confidence            578999999999999999999999999999999988776554 33322 122  3333222    223333344  6899


Q ss_pred             EEeCCCh
Q 020487          212 ILDCMGA  218 (325)
Q Consensus       212 vi~~~g~  218 (325)
                      ++++.|.
T Consensus        81 lvnnAg~   87 (235)
T 3l6e_A           81 VLHCAGT   87 (235)
T ss_dssp             EEEECCC
T ss_pred             EEECCCC
Confidence            9999873

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.43  E-value=0.00057  Score=56.99  Aligned_cols=77  Identities=19%  Similarity=0.319  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE-EE--eCCCchH----HHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTEDF----VARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~~----~~~~~~~~~~~~~d  210 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++++++.++.+.+. +++... .+  |-.+...    .+.+.+..+  ++|
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id   85 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFG--KVD   85 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHS--CCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcC--CCC
Confidence            4789999999999999999999999999999999998876654 455432 22  3233222    233333344  689


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      ++++++|
T Consensus        86 ~li~~Ag   92 (261)
T 3n74_A           86 ILVNNAG   92 (261)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999987

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.43  E-value=0.0022  Score=53.93  Aligned_cols=77  Identities=22%  Similarity=0.324  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCC-CE--EE--eCCCchHH----HHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA-DV--CI--NYKTEDFV----ARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~-~~--~~--~~~~~~~~----~~~~~~~~  205 (325)
                      .+.++||+|++|.+|..+++.+...|++|++++++.++.+.+.    ..+. ..  .+  |-.+....    +.+.+..+
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999999999887665432    2332 11  22  33332222    22223333


Q ss_pred             CCcccEEEeCCC
Q 020487          206 GKGVDVILDCMG  217 (325)
Q Consensus       206 ~~~~d~vi~~~g  217 (325)
                        ++|++|+++|
T Consensus       111 --~iD~vi~~Ag  120 (279)
T 1xg5_A          111 --GVDICINNAG  120 (279)
T ss_dssp             --CCSEEEECCC
T ss_pred             --CCCEEEECCC
Confidence              6899999987

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.42  E-value=0.0012  Score=53.45  Aligned_cols=92  Identities=14%  Similarity=0.146  Sum_probs=63.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEE-eCCCchHHHHHHHHhCCCcccEEEeCCChH-
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGKGVDVILDCMGAS-  219 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-  219 (325)
                      +|||+|++|.+|..+++.+...|++|++++++.++...+...+...+. |..+...     +...  ++|+||.|+|.. 
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~-----~~~~--~~d~vi~~ag~~~   74 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE-----ADLD--SVDAVVDALSVPW   74 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-----HHHT--TCSEEEECCCCCT
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH-----hhcc--cCCEEEECCccCC
Confidence            599999999999999999999999999999998877655433333221 2222222     3333  689999999751 


Q ss_pred             ----------HHHHhhccccC-CCEEEEEecc
Q 020487          220 ----------YFQRNLGSLNI-DGRLFIIGTQ  240 (325)
Q Consensus       220 ----------~~~~~~~~l~~-~g~~v~~g~~  240 (325)
                                ....+++.++. ++++|.+++.
T Consensus        75 ~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  106 (224)
T 3h2s_A           75 GSGRGYLHLDFATHLVSLLRNSDTLAVFILGS  106 (224)
T ss_dssp             TSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred             CcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence                      13445555543 4788888543

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.42  E-value=0.001  Score=55.09  Aligned_cols=74  Identities=24%  Similarity=0.278  Sum_probs=52.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      -.+.+++|+|++|.+|.++++.+...|++|++++++++..   ++++....+ .+-....+.+.+...  ++|++++++|
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~-~D~~~~~~~~~~~~~--~iD~lv~~Ag   90 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL---KRSGHRYVV-CDLRKDLDLLFEKVK--EVDILVLNAG   90 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH---HHTCSEEEE-CCTTTCHHHHHHHSC--CCSEEEECCC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH---HhhCCeEEE-eeHHHHHHHHHHHhc--CCCEEEECCC
Confidence            3578999999999999999999999999999999987433   344422222 222222334444443  6999999987

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.42  E-value=0.0014  Score=54.61  Aligned_cols=100  Identities=18%  Similarity=0.297  Sum_probs=64.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cChhhHHH----HHHcCCC-EEE--eCCCch----HHHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAV----CKDLGAD-VCI--NYKTED----FVARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~-~~~~~~~~----~~~~g~~-~~~--~~~~~~----~~~~~~~~~~~  206 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++. ++.+..+.    +++.+.. ..+  |-.+..    +.+.+.+..+ 
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-   85 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG-   85 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC-
Confidence            478999999999999999999999999999984 44443332    2233432 233  333322    2233333444 


Q ss_pred             CcccEEEeCCChH---------------------------HHHHhhccccCCCEEEEEecc
Q 020487          207 KGVDVILDCMGAS---------------------------YFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       207 ~~~d~vi~~~g~~---------------------------~~~~~~~~l~~~g~~v~~g~~  240 (325)
                       ++|+++++.|..                           .+..++..+.++|++|.+++.
T Consensus        86 -~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~  145 (259)
T 3edm_A           86 -EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQ  145 (259)
T ss_dssp             -SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             -CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCH
Confidence             689999988631                           012344566668899988654

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.41  E-value=0.0014  Score=54.08  Aligned_cols=78  Identities=31%  Similarity=0.436  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcC--CCEEE--eC--CCch----HHHHHHHHh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLG--ADVCI--NY--KTED----FVARVKEET  204 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g--~~~~~--~~--~~~~----~~~~~~~~~  204 (325)
                      .+.+++|+|+++.+|..+++.+...|++|++++++.++.+.+.    ..+  ...++  +.  .+..    +.+.+.+..
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~   92 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEF   92 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhC
Confidence            4789999999999999999999999999999999988765543    233  12232  22  2211    223333344


Q ss_pred             CCCcccEEEeCCCh
Q 020487          205 GGKGVDVILDCMGA  218 (325)
Q Consensus       205 ~~~~~d~vi~~~g~  218 (325)
                      +  ++|+++++.|.
T Consensus        93 g--~id~lv~nAg~  104 (247)
T 3i1j_A           93 G--RLDGLLHNASI  104 (247)
T ss_dssp             S--CCSEEEECCCC
T ss_pred             C--CCCEEEECCcc
Confidence            4  68999999873

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.40  E-value=0.00084  Score=56.21  Aligned_cols=78  Identities=23%  Similarity=0.354  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc-----CCC-EEE--eCCCchH----HHHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL-----GAD-VCI--NYKTEDF----VARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~-~~~--~~~~~~~----~~~~~~~~~  205 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++.+.+. ++     +.. ..+  |-.+...    .+.+.+..+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999887655432 22     111 222  3333222    222223333


Q ss_pred             CCcccEEEeCCCh
Q 020487          206 GKGVDVILDCMGA  218 (325)
Q Consensus       206 ~~~~d~vi~~~g~  218 (325)
                        ++|++++++|.
T Consensus        86 --~id~lv~~Ag~   96 (267)
T 2gdz_A           86 --RLDILVNNAGV   96 (267)
T ss_dssp             --CCCEEEECCCC
T ss_pred             --CCCEEEECCCC
Confidence              68999999873

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.40  E-value=0.00094  Score=56.10  Aligned_cols=77  Identities=19%  Similarity=0.279  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEE--eCCCch----HHHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTED----FVARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~----~~~~~~~~~~~~~~d  210 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++++++++.+... +++.. ..+  |-.+..    ..+.+.+..+  ++|
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~id   87 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFG--RLD   87 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcC--CCC
Confidence            4789999999999999999999999999999999988776543 44433 222  333322    2233333444  689


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      +++++.|
T Consensus        88 ~lv~nAg   94 (271)
T 3tzq_B           88 IVDNNAA   94 (271)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.40  E-value=0.00087  Score=55.51  Aligned_cols=77  Identities=30%  Similarity=0.450  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EE--EeCCCchH----HHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VC--INYKTEDF----VARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~--~~~~~~~~----~~~~~~~~~~~~~d  210 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++.+++++.+.+. .++.. ..  .|-.+...    .+.+.+..+  ++|
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~iD   85 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFG--GVD   85 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHC--CCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcC--CCC
Confidence            4789999999999999999999999999999999988776554 33322 22  23333222    233333444  689


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      +++++.|
T Consensus        86 ~lv~nAg   92 (248)
T 3op4_A           86 ILVNNAG   92 (248)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.40  E-value=0.00091  Score=56.24  Aligned_cols=78  Identities=23%  Similarity=0.373  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEE--eCCCchH----HHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDF----VARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~----~~~~~~~~~~~~~d  210 (325)
                      .+.++||+|+++.+|.++++.+...|++|++++++.++.+.+. +++.. ..+  |-.+...    .+.+.+..+  ++|
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~iD  104 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFG--RVD  104 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHS--CCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC--CCC
Confidence            4788999999999999999999999999999999988776554 44432 233  3333222    233333444  689


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      ++++++|.
T Consensus       105 ~lVnnAg~  112 (272)
T 4dyv_A          105 VLFNNAGT  112 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.40  E-value=0.00026  Score=57.35  Aligned_cols=96  Identities=10%  Similarity=0.217  Sum_probs=63.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH-
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-  220 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-  220 (325)
                      +|+|+|++|.+|..+++.+...|++|++++++.++....   ..-.++..+-.+..+.+.+...  ++|+||.|+|... 
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~--~~d~vi~~ag~~~~   76 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLH--GMDAIINVSGSGGK   76 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTT--TCSEEEECCCCTTS
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHc--CCCEEEECCcCCCC
Confidence            699999999999999999999999999999998754322   1112333332221334455444  6999999998521 


Q ss_pred             ---------HHHhhccccC-C-CEEEEEeccCC
Q 020487          221 ---------FQRNLGSLNI-D-GRLFIIGTQGG  242 (325)
Q Consensus       221 ---------~~~~~~~l~~-~-g~~v~~g~~~~  242 (325)
                               ...+++.++. + +++|.++....
T Consensus        77 ~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  109 (219)
T 3dqp_A           77 SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS  109 (219)
T ss_dssp             SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred             CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccc
Confidence                     2333444333 2 58888876543

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.40  E-value=0.0013  Score=54.78  Aligned_cols=77  Identities=23%  Similarity=0.459  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H---cCCCE-EE--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LGADV-CI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g~~~-~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.++||+|+++.+|.++++.+...|++|++++++.++.+.+. +   .+... .+  |-.+...    .+.+.+..+  
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--   82 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG--   82 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence            4789999999999999999999999999999999988776554 2   23222 22  3333222    233333344  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|+++++.|
T Consensus        83 ~id~lv~nAg   92 (257)
T 3imf_A           83 RIDILINNAA   92 (257)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899999988

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.39  E-value=0.0015  Score=54.05  Aligned_cols=77  Identities=18%  Similarity=0.319  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh-hhHH-HHHHcCCCE-EE--eCCCchHH----HHHHHHhCCCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLA-VCKDLGADV-CI--NYKTEDFV----ARVKEETGGKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~-~~~~-~~~~~g~~~-~~--~~~~~~~~----~~~~~~~~~~~~  209 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++. ++.+ .+++.+... .+  |-.+....    +.+.+..+  ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~i   83 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFG--RC   83 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--CC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcC--CC
Confidence            468899999999999999999999999999999887 5543 344555432 22  33332222    22223343  68


Q ss_pred             cEEEeCCC
Q 020487          210 DVILDCMG  217 (325)
Q Consensus       210 d~vi~~~g  217 (325)
                      |+++++.|
T Consensus        84 d~lv~nAg   91 (249)
T 2ew8_A           84 DILVNNAG   91 (249)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.39  E-value=0.00096  Score=55.57  Aligned_cols=78  Identities=19%  Similarity=0.189  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH---HHcCCC-EEE--eCCCch----HHHHHHHHhCCCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC---KDLGAD-VCI--NYKTED----FVARVKEETGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~---~~~g~~-~~~--~~~~~~----~~~~~~~~~~~~~  208 (325)
                      .|++++|+|+++++|.++++.+...|++|++..+++++.+.+   .+.+.. ..+  |-.+..    ..+.+.+..|  +
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G--~   83 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG--R   83 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS--C
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC--C
Confidence            488999999999999999999999999999999887755433   333432 222  333322    2334444455  6


Q ss_pred             ccEEEeCCCh
Q 020487          209 VDVILDCMGA  218 (325)
Q Consensus       209 ~d~vi~~~g~  218 (325)
                      +|+++++.|.
T Consensus        84 iDiLVNnAGi   93 (258)
T 4gkb_A           84 LDGLVNNAGV   93 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.39  E-value=0.0015  Score=54.29  Aligned_cols=76  Identities=26%  Similarity=0.340  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeC--CCchH----HHHHHHHhCCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY--KTEDF----VARVKEETGGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~----~~~~~~~~~~~~~d~v  212 (325)
                      .+.+++|+|++|.+|.++++.+...|++|+++++++++.+..+++.. ..+..  .+...    .+.+.+..+  ++|++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g--~iD~l   81 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALG--RVDVL   81 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHS--CCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcC--CCCEE
Confidence            36889999999999999999999999999999988776333334432 44332  23221    222223333  68999


Q ss_pred             EeCCC
Q 020487          213 LDCMG  217 (325)
Q Consensus       213 i~~~g  217 (325)
                      +++.|
T Consensus        82 v~~Ag   86 (256)
T 2d1y_A           82 VNNAA   86 (256)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.38  E-value=0.0016  Score=54.59  Aligned_cols=77  Identities=26%  Similarity=0.362  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H----cCCCE-EE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D----LGADV-CI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~----~g~~~-~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++.+.+. +    .+... .+  |-.+...    .+.+.+..+ 
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g-   98 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG-   98 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence            4789999999999999999999999999999999987655432 2    24432 22  3333222    222333344 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|++|+++|
T Consensus        99 -~iD~lvnnAg  108 (267)
T 1vl8_A           99 -KLDTVVNAAG  108 (267)
T ss_dssp             -CCCEEEECCC
T ss_pred             -CCCEEEECCC
Confidence             6899999987

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.38  E-value=0.0011  Score=55.52  Aligned_cols=78  Identities=18%  Similarity=0.341  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-E--EeCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.++||+|+++++|.++++.+...|++|++++++.++.+.+.    +.+... .  .|-.+...    .+.+.+..+  
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--   80 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWG--   80 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC--
Confidence            3678999999999999999999999999999999988765543    234322 2  23333222    223333344  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|++++++|.
T Consensus        81 ~iD~lVnnAG~   91 (264)
T 3tfo_A           81 RIDVLVNNAGV   91 (264)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999873

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.37  E-value=0.00097  Score=56.25  Aligned_cols=78  Identities=21%  Similarity=0.320  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEE--eCCCchH----HHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDF----VARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~----~~~~~~~~~~~~~d  210 (325)
                      .+.++||+|+++.+|.++++.+...|++|++++++.++.+.+. +++.. ..+  |-.+...    .+.+.+..+  ++|
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~iD  105 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFG--GVD  105 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHS--SCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcC--CCC
Confidence            4789999999999999999999999999999999988776543 44432 233  3333222    233333444  689


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      +++++.|.
T Consensus       106 ~lvnnAg~  113 (277)
T 3gvc_A          106 KLVANAGV  113 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.37  E-value=0.00082  Score=56.04  Aligned_cols=78  Identities=22%  Similarity=0.345  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHH----HHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFV----ARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~----~~~~~~~~~~  207 (325)
                      .+.+++|+|++|.+|.++++.+...|++|+++++++++.+.+.    ..+... .+  |-.+....    +.+.+..+ .
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-g   86 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH-G   86 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT-T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC-C
Confidence            4789999999999999999999999999999999987665432    234321 22  33332222    22222331 2


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|+++++.|
T Consensus        87 ~id~lv~~Ag   96 (260)
T 2ae2_A           87 KLNILVNNAG   96 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.37  E-value=0.0017  Score=53.62  Aligned_cols=77  Identities=31%  Similarity=0.452  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++.+.+.    ..+... .+  |-.+...    .+.+.+..+  
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g--   83 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG--   83 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC--
Confidence            3688999999999999999999999999999999987765433    234332 22  3333222    222233343  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|+++++.|
T Consensus        84 ~id~lv~nAg   93 (247)
T 2jah_A           84 GLDILVNNAG   93 (247)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899999987

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.37  E-value=0.00039  Score=58.37  Aligned_cols=79  Identities=24%  Similarity=0.397  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEecChhh-HHHHH-HcCCC-EEE--eCCCchHH----HHHHHHhC-C
Q 020487          139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCK-DLGAD-VCI--NYKTEDFV----ARVKEETG-G  206 (325)
Q Consensus       139 ~~~~vli~g~--~g~~G~~~~~~a~~~g~~v~~~~~~~~~-~~~~~-~~g~~-~~~--~~~~~~~~----~~~~~~~~-~  206 (325)
                      .+.+++|+|+  ++.+|.++++.+...|++|++++++.++ .+.+. +++.. ..+  |-.+....    +.+.+..+ .
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4688999998  8999999999999999999999988765 24443 34422 122  33332222    22333333 1


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                      .++|+++++.|
T Consensus        86 ~~iD~lv~nAg   96 (269)
T 2h7i_A           86 NKLDGVVHSIG   96 (269)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCceEEEECCc
Confidence            26899999987

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.37  E-value=0.00097  Score=56.06  Aligned_cols=79  Identities=24%  Similarity=0.384  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHH----HHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFV----ARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~----~~~~~~~~~~  207 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++++++++.+.+.    +.+... .+  |-.+....    +.+.+..+ .
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-g   98 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD-G   98 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT-S
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC-C
Confidence            4789999999999999999999999999999999987665432    234332 22  33332222    22222331 2


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|+++++.|.
T Consensus        99 ~id~lv~nAg~  109 (273)
T 1ae1_A           99 KLNILVNNAGV  109 (273)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            69999999873

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.36  E-value=0.0017  Score=54.42  Aligned_cols=77  Identities=26%  Similarity=0.384  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEE--eCCCchH----HHHHHHHhCCCcccE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI--NYKTEDF----VARVKEETGGKGVDV  211 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~--~~~~~~~----~~~~~~~~~~~~~d~  211 (325)
                      .+.+++|+|++|.+|.++++.+...|++|+++++++++.+.+. ++.....+  |-.+...    .+.+.+..+  ++|+
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~iD~   85 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFG--RLDC   85 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHS--CCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcC--CCCE
Confidence            4789999999999999999999999999999999988766554 33322233  3223222    222233343  6899


Q ss_pred             EEeCCC
Q 020487          212 ILDCMG  217 (325)
Q Consensus       212 vi~~~g  217 (325)
                      +|++.|
T Consensus        86 lv~nAg   91 (270)
T 1yde_A           86 VVNNAG   91 (270)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999986

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.35  E-value=0.0014  Score=55.06  Aligned_cols=77  Identities=21%  Similarity=0.237  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecChh---hHHHHHH-cCCCEEE--eCCCchHH----HHHHHHhCC
Q 020487          139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVCKD-LGADVCI--NYKTEDFV----ARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~~---~~~~~~~-~g~~~~~--~~~~~~~~----~~~~~~~~~  206 (325)
                      .+.+++|+|++  |.+|.++++.+...|++|++++++.+   ..+.+.+ .+....+  |-.+....    +.+.+..+ 
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-   83 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG-   83 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS-
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence            46889999998  99999999999999999999998875   3333332 3422233  33332222    22223333 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|+++++.|
T Consensus        84 -~id~lv~nAg   93 (275)
T 2pd4_A           84 -SLDFIVHSVA   93 (275)
T ss_dssp             -CEEEEEECCC
T ss_pred             -CCCEEEECCc
Confidence             6899999987

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.35  E-value=0.00075  Score=55.75  Aligned_cols=77  Identities=19%  Similarity=0.279  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEE--eCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      .+.+++|+|++|.+|.++++.+...|++|+++++++++.+.+.++.....+  |-.+....+.+.+..+  ++|+++++.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~id~lv~~A   82 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVE--RLDVLFNVA   82 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCS--CCSEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhC--CCCEEEECC
Confidence            478899999999999999999999999999999988766544333211222  3333333333434343  689999998


Q ss_pred             C
Q 020487          217 G  217 (325)
Q Consensus       217 g  217 (325)
                      |
T Consensus        83 g   83 (246)
T 2ag5_A           83 G   83 (246)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.35  E-value=0.0013  Score=54.89  Aligned_cols=77  Identities=30%  Similarity=0.491  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcC-CC-EEE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLG-AD-VCI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g-~~-~~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++++++.++.+.+.    +.+ .. ..+  |-.+...    .+.+.+..+ 
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-   87 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG-   87 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC-
Confidence            4789999999999999999999999999999999988765443    233 22 222  3333222    223333444 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|+++++.|
T Consensus        88 -~id~lvnnAg   97 (262)
T 3pk0_A           88 -GIDVVCANAG   97 (262)
T ss_dssp             -CCSEEEECCC
T ss_pred             -CCCEEEECCC
Confidence             6999999987

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.35  E-value=0.00085  Score=56.03  Aligned_cols=77  Identities=26%  Similarity=0.422  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc----CCCE-EE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----GADV-CI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~----g~~~-~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+. ++    +... .+  |-.+...    .+.+.+..+ 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-   84 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG-   84 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence            4688999999999999999999999999999999987665432 22    4332 22  3333222    222333343 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|+++++.|
T Consensus        85 -~id~lv~~Ag   94 (263)
T 3ai3_A           85 -GADILVNNAG   94 (263)
T ss_dssp             -SCSEEEECCC
T ss_pred             -CCCEEEECCC
Confidence             6899999987

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.35  E-value=0.00075  Score=55.94  Aligned_cols=79  Identities=20%  Similarity=0.306  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC--EEE--eCCCchHHHHHHH-HhCCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD--VCI--NYKTEDFVARVKE-ETGGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~--~~~--~~~~~~~~~~~~~-~~~~~~~d~v  212 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+. +++..  ..+  |-.+......+.+ .....++|++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            4688999999999999999999999999999999987765443 34332  222  3333222222211 1101268999


Q ss_pred             EeCCC
Q 020487          213 LDCMG  217 (325)
Q Consensus       213 i~~~g  217 (325)
                      |+++|
T Consensus        90 i~~Ag   94 (254)
T 2wsb_A           90 VNSAG   94 (254)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.34  E-value=0.0013  Score=55.04  Aligned_cols=77  Identities=26%  Similarity=0.503  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----H-cCCCE-EE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----D-LGADV-CI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~-~g~~~-~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .+.++||+|+++.+|.++++.+...|++|++++++.++.+.+.    + .+... .+  |-.+...    .+.+.+..+ 
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-   97 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG-   97 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-
Confidence            4789999999999999999999999999999999988765442    1 34332 22  3333222    333344444 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|+++++.|
T Consensus        98 -~id~lv~nAg  107 (266)
T 4egf_A           98 -GLDVLVNNAG  107 (266)
T ss_dssp             -SCSEEEEECC
T ss_pred             -CCCEEEECCC
Confidence             6999999987

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.34  E-value=0.0013  Score=55.57  Aligned_cols=77  Identities=30%  Similarity=0.457  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc---CCCEE-E--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL---GADVC-I--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~~~-~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.++||+|+++.+|.++++.+...|++|++++++.++.+.+. ++   +.... +  |-.+...    .+.+.+..+  
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--   84 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG--   84 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC--
Confidence            4789999999999999999999999999999999988766554 22   33322 2  2223222    223333344  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|++++++|
T Consensus        85 ~iD~lvnnAg   94 (280)
T 3tox_A           85 GLDTAFNNAG   94 (280)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.33  E-value=0.00089  Score=56.06  Aligned_cols=77  Identities=25%  Similarity=0.353  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H---c--CCCE-EE--eCCCchH----HHHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---L--GADV-CI--NYKTEDF----VARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~--g~~~-~~--~~~~~~~----~~~~~~~~~  205 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++.+.+. +   .  +... .+  |-.+...    .+.+.+..+
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999987665432 2   1  4332 22  3333222    222233343


Q ss_pred             CCcccEEEeCCC
Q 020487          206 GKGVDVILDCMG  217 (325)
Q Consensus       206 ~~~~d~vi~~~g  217 (325)
                        ++|+++++.|
T Consensus        92 --~id~lv~nAg  101 (267)
T 1iy8_A           92 --RIDGFFNNAG  101 (267)
T ss_dssp             --CCSEEEECCC
T ss_pred             --CCCEEEECCC
Confidence              6899999986

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.33  E-value=0.0016  Score=53.92  Aligned_cols=78  Identities=19%  Similarity=0.298  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCch----HHHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTED----FVARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~----~~~~~~~~~~~~  207 (325)
                      .+.+++|+|+++.+|..+++.+...|++|++++++.++.+.+.    +.+.. ..+  |-.+..    +.+.+.+..+  
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--   85 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFG--   85 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence            4789999999999999999999999999999999988765543    22332 222  323322    2233333444  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|+++++.|.
T Consensus        86 ~id~li~~Ag~   96 (253)
T 3qiv_A           86 GIDYLVNNAAI   96 (253)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            69999999874

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.33  E-value=0.0019  Score=54.42  Aligned_cols=78  Identities=24%  Similarity=0.361  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCch----HHHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED----FVARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~----~~~~~~~~~~~~  207 (325)
                      .+.++||+|+++.+|.++++.+...|++|++++++.++.+.+.    ..+... .+  |-.+..    ..+.+.+..+  
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--  100 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG--  100 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC--
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC--
Confidence            5789999999999999999999999999999999988765443    234332 22  333322    2233333444  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|++++++|.
T Consensus       101 ~id~lv~nAg~  111 (279)
T 3sju_A          101 PIGILVNSAGR  111 (279)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            68999999873

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.33  E-value=0.00081  Score=55.97  Aligned_cols=77  Identities=27%  Similarity=0.336  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEE--eCCCchH----HHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDF----VARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~----~~~~~~~~~~~~~d  210 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++++++.++.+... +++.. ..+  |-.+...    .+.+.+..+  ++|
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~id   83 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFG--HVH   83 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC--CCC
Confidence            4789999999999999999999999999999999887665443 34332 222  3233222    233333444  689


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      +++++.|
T Consensus        84 ~lv~nAg   90 (257)
T 3tpc_A           84 GLVNCAG   90 (257)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.33  E-value=0.0018  Score=54.46  Aligned_cols=78  Identities=27%  Similarity=0.415  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.++||+|+++.+|.++++.+...|++|++++++.++.+.+.    +.+.. ..+  |-.+...    .+.+.+..+  
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g--  108 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG--  108 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC--
Confidence            4789999999999999999999999999999999887665443    33332 233  3333222    233333444  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|++++++|.
T Consensus       109 ~iD~lvnnAg~  119 (276)
T 3r1i_A          109 GIDIAVCNAGI  119 (276)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999873

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.33  E-value=0.002  Score=53.77  Aligned_cols=78  Identities=19%  Similarity=0.281  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.++||+|+++.+|.++++.+...|++|++++++.++.+.+.    +.+... .+  |-.+...    .+.+.+..+  
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--   87 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG--   87 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS--
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC--
Confidence            5789999999999999999999999999999999988765443    334332 22  3333222    223333343  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|+++++.|.
T Consensus        88 ~id~lv~nAg~   98 (264)
T 3ucx_A           88 RVDVVINNAFR   98 (264)
T ss_dssp             CCSEEEECCCS
T ss_pred             CCcEEEECCCC
Confidence            68999999853

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.33  E-value=0.0019  Score=54.59  Aligned_cols=78  Identities=21%  Similarity=0.306  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H---cCCCE-EE--eCCCch----HHHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LGADV-CI--NYKTED----FVARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g~~~-~~--~~~~~~----~~~~~~~~~~~~  207 (325)
                      ++.++||+|+++.+|.++++.+...|++|++++++.++.+.+. +   .+... .+  |-.+..    ..+.+.+..+  
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--  104 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFG--  104 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC--
Confidence            4789999999999999999999999999999999988766543 2   23332 22  333322    2233333444  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|++++++|.
T Consensus       105 ~iD~lVnnAg~  115 (283)
T 3v8b_A          105 HLDIVVANAGI  115 (283)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999873

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.33  E-value=0.00062  Score=56.55  Aligned_cols=77  Identities=22%  Similarity=0.255  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++++++.++.+.+.    +.+... .+  |-.+...    .+.+.+.   .
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~---g   82 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH---A   82 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH---S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh---C
Confidence            4788999999999999999999999999999999988765443    334322 22  3333222    2222233   3


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|+++++.|.
T Consensus        83 ~id~lv~nAg~   93 (252)
T 3h7a_A           83 PLEVTIFNVGA   93 (252)
T ss_dssp             CEEEEEECCCC
T ss_pred             CceEEEECCCc
Confidence            69999999883

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.32  E-value=0.0018  Score=53.74  Aligned_cols=78  Identities=24%  Similarity=0.385  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE-EE--eCCCchH----HHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTEDF----VARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~~----~~~~~~~~~~~~~d  210 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++.+.+. +++... .+  |-.+...    .+.+.+..+  .+|
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g--~id   82 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLG--TLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHC--SCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcC--CCC
Confidence            4678999999999999999999999999999999987765543 444332 22  2222221    222333343  689


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      +++++.|.
T Consensus        83 ~lv~~Ag~   90 (253)
T 1hxh_A           83 VLVNNAGI   90 (253)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.32  E-value=0.0021  Score=53.48  Aligned_cols=102  Identities=12%  Similarity=0.203  Sum_probs=69.0

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCC--CEEE--eCCCch----HHHHHHHHh
Q 020487          139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA--DVCI--NYKTED----FVARVKEET  204 (325)
Q Consensus       139 ~~~~vli~g~~g--~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~--~~~~--~~~~~~----~~~~~~~~~  204 (325)
                      .|++++|+|++|  ++|.++++.+...|++|+++.++++..+.+.    +++.  ...+  |-.+..    ..+.+.+..
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            488999999865  8999999999999999999999987766554    3342  2233  323322    233344455


Q ss_pred             CCCcccEEEeCCChH---------------HH---------------HHhhccccCCCEEEEEeccCC
Q 020487          205 GGKGVDVILDCMGAS---------------YF---------------QRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       205 ~~~~~d~vi~~~g~~---------------~~---------------~~~~~~l~~~g~~v~~g~~~~  242 (325)
                      |  ++|+++++.|..               .+               ......++.+|++|.+++..+
T Consensus        85 G--~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~  150 (256)
T 4fs3_A           85 G--NIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGG  150 (256)
T ss_dssp             C--CCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGG
T ss_pred             C--CCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccc
Confidence            5  699999987620               01               123455678899999976554

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.32  E-value=0.00067  Score=56.42  Aligned_cols=77  Identities=27%  Similarity=0.429  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEE--eCCCchHH----HHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDFV----ARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~~----~~~~~~~~~~~~d  210 (325)
                      .+.+++|+|++|.+|.++++.+...|++|+++++++++.+.+. +++.. ..+  |-.+....    +.+.+..+  ++|
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~iD   81 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFG--SVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcC--CCC
Confidence            4678999999999999999999999999999999987766543 34432 222  33332222    22223333  689


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      +++++.|
T Consensus        82 ~lv~nAg   88 (254)
T 1hdc_A           82 GLVNNAG   88 (254)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.31  E-value=0.0026  Score=47.44  Aligned_cols=93  Identities=20%  Similarity=0.237  Sum_probs=64.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      ..+++|+|+ |.+|..+++.+...|.+|+++++++++.+.+++.+...+ ..+..+ ...+. ..+-.++|.++.+.++.
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~-~gd~~~-~~~l~-~~~~~~~d~vi~~~~~~   81 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAV-IADPTD-ESFYR-SLDLEGVSAVLITGSDD   81 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEE-ECCTTC-HHHHH-HSCCTTCSEEEECCSCH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEE-ECCCCC-HHHHH-hCCcccCCEEEEecCCH
Confidence            457999998 999999999999999999999999999888887775433 222222 22222 23445799999999964


Q ss_pred             HH----HHhhccccCCCEEEEE
Q 020487          220 YF----QRNLGSLNIDGRLFII  237 (325)
Q Consensus       220 ~~----~~~~~~l~~~g~~v~~  237 (325)
                      ..    ....+.+. ..+++..
T Consensus        82 ~~n~~~~~~a~~~~-~~~iia~  102 (141)
T 3llv_A           82 EFNLKILKALRSVS-DVYAIVR  102 (141)
T ss_dssp             HHHHHHHHHHHHHC-CCCEEEE
T ss_pred             HHHHHHHHHHHHhC-CceEEEE
Confidence            32    23334444 5566554

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.31  E-value=0.00093  Score=57.09  Aligned_cols=77  Identities=26%  Similarity=0.376  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHH----HHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFV----ARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~----~~~~~~~~~~  207 (325)
                      .+.++||+|++|.+|.++++.+...|++|++++++.++.+.+.    ..+... .+  |-.+....    +.+.+..+  
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--  107 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG--  107 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC--
Confidence            5789999999999999999999999999999999988765543    234332 22  33332222    22333333  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|++|+++|
T Consensus       108 ~id~lvnnAg  117 (301)
T 3tjr_A          108 GVDVVFSNAG  117 (301)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999988

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.30  E-value=0.0023  Score=53.94  Aligned_cols=77  Identities=23%  Similarity=0.436  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC------------hhhHHH----HHHcCCCE-EE--eCCCch----
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS------------EEKLAV----CKDLGADV-CI--NYKTED----  195 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~------------~~~~~~----~~~~g~~~-~~--~~~~~~----  195 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++++++            .++.+.    ++..+... .+  |-.+..    
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            47899999999999999999999999999999986            333322    23344432 22  333322    


Q ss_pred             HHHHHHHHhCCCcccEEEeCCC
Q 020487          196 FVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       196 ~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +.+.+.+..+  ++|++++++|
T Consensus        89 ~~~~~~~~~g--~id~lv~nAg  108 (281)
T 3s55_A           89 FVAEAEDTLG--GIDIAITNAG  108 (281)
T ss_dssp             HHHHHHHHHT--CCCEEEECCC
T ss_pred             HHHHHHHhcC--CCCEEEECCC
Confidence            2233334444  6999999987

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.30  E-value=0.0021  Score=54.07  Aligned_cols=77  Identities=35%  Similarity=0.427  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.+++|+|++|.+|.++++.+...|++|+++++++++.+.+.    +.+... .+  |-.+...    .+.+.+..+  
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--   98 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG--   98 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC--
Confidence            4688999999999999999999999999999999987654432    234332 22  3333222    222233333  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|++|++.|
T Consensus        99 ~iD~lv~~Ag  108 (277)
T 2rhc_B           99 PVDVLVNNAG  108 (277)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899999987

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.30  E-value=0.0017  Score=53.93  Aligned_cols=78  Identities=21%  Similarity=0.291  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++++++.++.+.+.    ..+... .+  |-.+...    .+.+.+..+  
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--   88 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG--   88 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC--
Confidence            4789999999999999999999889999999999988765443    334332 22  3333222    233333444  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|+++++.|.
T Consensus        89 ~id~lv~nAg~   99 (256)
T 3gaf_A           89 KITVLVNNAGG   99 (256)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            68999999873

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.29  E-value=0.0013  Score=55.85  Aligned_cols=77  Identities=27%  Similarity=0.401  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H---cC-CC-EEE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LG-AD-VCI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g-~~-~~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .+.++||+|+++.+|.++++.+...|++|++++++.++.+.+. +   .+ .. ..+  |-.+...    .+.+.+..+ 
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g-  118 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG-  118 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC-
Confidence            4789999999999999999999999999999999988765443 2   23 12 222  3333222    233334444 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|+++++.|
T Consensus       119 -~iD~lvnnAg  128 (293)
T 3rih_A          119 -ALDVVCANAG  128 (293)
T ss_dssp             -CCCEEEECCC
T ss_pred             -CCCEEEECCC
Confidence             6899999987

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.29  E-value=0.0019  Score=53.51  Aligned_cols=78  Identities=26%  Similarity=0.272  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----c-C-CCEEE--eC--CCchH----HHHHHHHh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----L-G-ADVCI--NY--KTEDF----VARVKEET  204 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~-g-~~~~~--~~--~~~~~----~~~~~~~~  204 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++++++++.+.+.+    . + ....+  |-  .+...    .+.+.+..
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNY   90 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999887654431    1 2 11222  32  22221    22233333


Q ss_pred             CCCcccEEEeCCCh
Q 020487          205 GGKGVDVILDCMGA  218 (325)
Q Consensus       205 ~~~~~d~vi~~~g~  218 (325)
                      +  ++|+++++.|.
T Consensus        91 g--~id~lv~nAg~  102 (252)
T 3f1l_A           91 P--RLDGVLHNAGL  102 (252)
T ss_dssp             S--CCSEEEECCCC
T ss_pred             C--CCCEEEECCcc
Confidence            3  68999999873

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.29  E-value=0.0022  Score=53.43  Aligned_cols=77  Identities=21%  Similarity=0.331  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.+++|+|++|.+|.++++.+...|++|+++.++.++.+.+.    +.+... .+  |-.+...    .+.+.+..+  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--   83 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG--   83 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC--
Confidence            4688999999999999999999999999999999987665432    234332 22  3333221    223333344  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|+++++.|
T Consensus        84 ~id~lv~nAg   93 (262)
T 1zem_A           84 KIDFLFNNAG   93 (262)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899999986

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.29  E-value=0.0017  Score=54.11  Aligned_cols=79  Identities=23%  Similarity=0.365  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc-----CCC-EEE--eCCCchHHHH-HHHHhCCCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL-----GAD-VCI--NYKTEDFVAR-VKEETGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~-~~~--~~~~~~~~~~-~~~~~~~~~  208 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++.+.+. ++     +.. ..+  |-.+...... +.+.....+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999999999999987665432 22     212 222  3333222222 222222223


Q ss_pred             ccEEEeCCC
Q 020487          209 VDVILDCMG  217 (325)
Q Consensus       209 ~d~vi~~~g  217 (325)
                      +|+++++.|
T Consensus        86 id~lv~~Ag   94 (260)
T 2z1n_A           86 ADILVYSTG   94 (260)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.28  E-value=0.0018  Score=54.64  Aligned_cols=78  Identities=24%  Similarity=0.374  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H---c-CCC-EEE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---L-GAD-VCI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~-g~~-~~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .|.++||+|+++.+|.++++.+...|++|++++++.++.+.+. +   . +.. ..+  |-.+...    .+.+.+..+ 
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g-  110 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA-  110 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence            4789999999999999999999999999999999988765443 2   1 222 233  3333222    233333444 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       ++|++++++|.
T Consensus       111 -~iD~lvnnAG~  121 (281)
T 4dry_A          111 -RLDLLVNNAGS  121 (281)
T ss_dssp             -CCSEEEECCCC
T ss_pred             -CCCEEEECCCC
Confidence             68999999873

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.28  E-value=0.0015  Score=55.78  Aligned_cols=78  Identities=19%  Similarity=0.250  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCC-C-EEE--eCCCc-hH----HHHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA-D-VCI--NYKTE-DF----VARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~-~-~~~--~~~~~-~~----~~~~~~~~~  205 (325)
                      .+.+++|+|+++++|.++++.+...|++|++++++.++.+.+.    +.+. . ..+  |-.+. ..    .+.+.+..+
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g   90 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG   90 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999999999999988764432    2222 1 222  33333 22    233333344


Q ss_pred             CCcccEEEeCCCh
Q 020487          206 GKGVDVILDCMGA  218 (325)
Q Consensus       206 ~~~~d~vi~~~g~  218 (325)
                        ++|++|+++|.
T Consensus        91 --~iD~lv~nAg~  101 (311)
T 3o26_A           91 --KLDILVNNAGV  101 (311)
T ss_dssp             --SCCEEEECCCC
T ss_pred             --CCCEEEECCcc
Confidence              69999999984

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.28  E-value=0.0014  Score=57.21  Aligned_cols=78  Identities=19%  Similarity=0.390  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh-----------HHHHHHcCCCEE-E--eCCCch----HHHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-----------LAVCKDLGADVC-I--NYKTED----FVARV  200 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~-----------~~~~~~~g~~~~-~--~~~~~~----~~~~~  200 (325)
                      .|.++||+|+++.+|.++++.+...|++|++++++.++           .+.++..+.... +  |-.+..    +.+.+
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~  123 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA  123 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            47899999999999999999999999999999988763           223344454322 2  333322    22333


Q ss_pred             HHHhCCCcccEEEeCCCh
Q 020487          201 KEETGGKGVDVILDCMGA  218 (325)
Q Consensus       201 ~~~~~~~~~d~vi~~~g~  218 (325)
                      .+..+  ++|++|+++|.
T Consensus       124 ~~~~g--~iDilVnnAG~  139 (346)
T 3kvo_A          124 IKKFG--GIDILVNNASA  139 (346)
T ss_dssp             HHHHS--CCCEEEECCCC
T ss_pred             HHHcC--CCCEEEECCCC
Confidence            33444  69999999883

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.26  E-value=0.00098  Score=55.72  Aligned_cols=78  Identities=26%  Similarity=0.385  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEE--eCCCchH----HHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDF----VARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~----~~~~~~~~~~~~~d  210 (325)
                      .+.+++|+|++|.+|.++++.+...|++|+++++++++.+.+. +++.. ..+  |-.+...    .+.+.+..+  .+|
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g--~iD   82 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFG--RLH   82 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHS--CCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcC--CCc
Confidence            4678999999999999999999999999999999988776554 34322 222  3333222    222333343  689


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      +++++.|.
T Consensus        83 ~lvnnAg~   90 (263)
T 2a4k_A           83 GVAHFAGV   90 (263)
T ss_dssp             EEEEGGGG
T ss_pred             EEEECCCC
Confidence            99999873

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.26  E-value=0.0026  Score=54.15  Aligned_cols=77  Identities=18%  Similarity=0.264  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC------------hhhHHH----HHHcCCCEE-E--eCCCchH---
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS------------EEKLAV----CKDLGADVC-I--NYKTEDF---  196 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~------------~~~~~~----~~~~g~~~~-~--~~~~~~~---  196 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++++++            .++.+.    ++..+.... +  |-.+...   
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  106 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA  106 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            47899999999999999999999999999999876            343332    234454332 2  3333222   


Q ss_pred             -HHHHHHHhCCCcccEEEeCCC
Q 020487          197 -VARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       197 -~~~~~~~~~~~~~d~vi~~~g  217 (325)
                       .+.+.+..+  ++|+++++.|
T Consensus       107 ~~~~~~~~~g--~iD~lv~nAg  126 (299)
T 3t7c_A          107 AVDDGVTQLG--RLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHS--CCCEEEECCC
T ss_pred             HHHHHHHHhC--CCCEEEECCC
Confidence             233333444  6899999887

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.26  E-value=0.00086  Score=56.56  Aligned_cols=77  Identities=27%  Similarity=0.324  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE-EE--eCCCchH----HHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTEDF----VARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~~----~~~~~~~~~~~~~d  210 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++.+.+. +++... .+  |-.+...    .+.+.+..+  ++|
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g--~id   81 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYG--RVD   81 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHS--CCS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCC--CCC
Confidence            3678999999999999999999999999999999988776554 444332 22  3333222    222333333  689


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      ++++++|
T Consensus        82 ~lv~~Ag   88 (281)
T 3m1a_A           82 VLVNNAG   88 (281)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.26  E-value=0.0017  Score=54.33  Aligned_cols=78  Identities=23%  Similarity=0.334  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcC-CCE--EE--eCCCchHHHHHHHHhCCCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLG-ADV--CI--NYKTEDFVARVKEETGGKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g-~~~--~~--~~~~~~~~~~~~~~~~~~~~  209 (325)
                      .+.++||+|+++.+|.++++.+...|++|++++++.++.+...    ..+ ...  .+  |..+....+.+.+..+  ++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g--~i   86 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYP--KV   86 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCC--CC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcC--CC
Confidence            4789999999999999999999999999999999987665432    222 111  22  3333333444444443  68


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |+++++.|.
T Consensus        87 d~lv~nAg~   95 (267)
T 3t4x_A           87 DILINNLGI   95 (267)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.25  E-value=0.00098  Score=55.60  Aligned_cols=77  Identities=25%  Similarity=0.341  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE-EE--eCCCchH----HHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTEDF----VARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~~----~~~~~~~~~~~~~d  210 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+. +++... .+  |-.+...    .+.+.+..+  ++|
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g--~id   88 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFG--RVD   88 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCC--CCC
Confidence            4789999999999999999999999999999999887665443 444332 22  3333222    222223333  689


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      ++|+++|
T Consensus        89 ~li~~Ag   95 (265)
T 2o23_A           89 VAVNCAG   95 (265)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999986

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.25  E-value=0.0035  Score=52.24  Aligned_cols=77  Identities=19%  Similarity=0.296  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEE--eCCCchH----HHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDF----VARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~----~~~~~~~~~~~~~d  210 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++.+.+. ++... ..+  |-.+...    .+.+.+..+  ++|
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g--~iD   88 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALG--GFD   88 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHT--CCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcC--CCC
Confidence            4789999999999999999999999999999999987766554 33221 222  3333222    222333343  689


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      +++++.|
T Consensus        89 ~lv~~Ag   95 (263)
T 3ak4_A           89 LLCANAG   95 (263)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.24  E-value=0.003  Score=51.57  Aligned_cols=76  Identities=25%  Similarity=0.406  Sum_probs=53.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEE--eCCCchH----HHHHHHHhCCCcccEE
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI--NYKTEDF----VARVKEETGGKGVDVI  212 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~--~~~~~~~----~~~~~~~~~~~~~d~v  212 (325)
                      +.+++|+|++|.+|..+++.+...|++|++++++.++.+.+. +++....+  |-.+...    .+.+.+..+  ++|++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id~l   82 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFG--ELSAL   82 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHS--CCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcC--CCCEE
Confidence            568999999999999999999999999999999987766544 34322333  3233222    222233333  68999


Q ss_pred             EeCCC
Q 020487          213 LDCMG  217 (325)
Q Consensus       213 i~~~g  217 (325)
                      +++.|
T Consensus        83 i~~Ag   87 (234)
T 2ehd_A           83 VNNAG   87 (234)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.24  E-value=0.0018  Score=54.27  Aligned_cols=77  Identities=23%  Similarity=0.245  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.++||+|+++.+|.++++.+...|++|+++.+++++.+.+.    +.+.. ..+  |-.+...    .+.+.+..+  
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--  104 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG--  104 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC--
Confidence            4789999999999999999999999999999999988765442    23332 222  3333222    233333444  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|++++++|
T Consensus       105 ~iD~lvnnAg  114 (270)
T 3ftp_A          105 ALNVLVNNAG  114 (270)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899999987

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.24  E-value=0.0028  Score=53.33  Aligned_cols=78  Identities=18%  Similarity=0.341  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC------------hhhHHHH----HHcCCCE-EE--eCCCchH---
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS------------EEKLAVC----KDLGADV-CI--NYKTEDF---  196 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~------------~~~~~~~----~~~g~~~-~~--~~~~~~~---  196 (325)
                      .+.++||+|+++.+|.++++.+...|++|++++++            .++.+..    +..+... .+  |-.+...   
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            47899999999999999999999999999999876            4443322    2344432 22  3333222   


Q ss_pred             -HHHHHHHhCCCcccEEEeCCCh
Q 020487          197 -VARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       197 -~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                       .+.+.+..+  ++|+++++.|.
T Consensus        92 ~~~~~~~~~g--~id~lv~nAg~  112 (278)
T 3sx2_A           92 ALQAGLDELG--RLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHC--CCCEEEECCCC
T ss_pred             HHHHHHHHcC--CCCEEEECCCC
Confidence             233333444  68999999873

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.24  E-value=0.0021  Score=53.98  Aligned_cols=78  Identities=24%  Similarity=0.416  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCEE-E--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC-I--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~~-~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .|.++||+|+++.+|.++++.+...|++|++++++.++.+.+.    +.+.... +  |-.+...    .+.+.+..+  
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--  102 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI--  102 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC--
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC--
Confidence            4789999999999999999999999999999999988765432    3344332 2  2222222    222233333  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|++++++|.
T Consensus       103 ~iD~lv~nAg~  113 (271)
T 4ibo_A          103 DVDILVNNAGI  113 (271)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            68999999873

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.23  E-value=0.0013  Score=54.77  Aligned_cols=77  Identities=21%  Similarity=0.361  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh-HHHHH-Hc----CCCE-EE--eCCCchH----HHHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCK-DL----GADV-CI--NYKTEDF----VARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~-~~~~~-~~----g~~~-~~--~~~~~~~----~~~~~~~~~  205 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++ .+.+. ++    +... .+  |-.+...    .+.+.+..+
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            36789999999999999999999999999999988766 44332 22    4332 22  3223222    222233333


Q ss_pred             CCcccEEEeCCC
Q 020487          206 GKGVDVILDCMG  217 (325)
Q Consensus       206 ~~~~d~vi~~~g  217 (325)
                        ++|++|++.|
T Consensus        83 --~iD~lv~~Ag   92 (260)
T 1x1t_A           83 --RIDILVNNAG   92 (260)
T ss_dssp             --CCSEEEECCC
T ss_pred             --CCCEEEECCC
Confidence              6899999987

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.23  E-value=0.0012  Score=55.13  Aligned_cols=79  Identities=24%  Similarity=0.342  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHHH----HHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVA----RVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~----~~~~~~~~~  207 (325)
                      .+.+++|+|++|.+|..+++.+...|++|+++.+++++.+.+.    ..+... .+  |-.+.....    .+.+..+ .
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~   91 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG-G   91 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT-T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhC-C
Confidence            4688999999999999999999999999999999887655432    234332 22  222222122    2222221 2


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|++|+++|.
T Consensus        92 ~id~li~~Ag~  102 (266)
T 1xq1_A           92 KLDILINNLGA  102 (266)
T ss_dssp             CCSEEEEECCC
T ss_pred             CCcEEEECCCC
Confidence            68999999873

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.23  E-value=0.0016  Score=55.12  Aligned_cols=78  Identities=28%  Similarity=0.454  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh-----------HHHHHHcCCCE-EE--eCCCch----HHHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-----------LAVCKDLGADV-CI--NYKTED----FVARV  200 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~-----------~~~~~~~g~~~-~~--~~~~~~----~~~~~  200 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++++++.++           .+.++..+... .+  |-.+..    +.+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   87 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT   87 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            47899999999999999999999999999999988752           22233344332 22  333322    23333


Q ss_pred             HHHhCCCcccEEEeCCCh
Q 020487          201 KEETGGKGVDVILDCMGA  218 (325)
Q Consensus       201 ~~~~~~~~~d~vi~~~g~  218 (325)
                      .+..+  ++|++++++|.
T Consensus        88 ~~~~g--~id~lvnnAg~  103 (285)
T 3sc4_A           88 VEQFG--GIDICVNNASA  103 (285)
T ss_dssp             HHHHS--CCSEEEECCCC
T ss_pred             HHHcC--CCCEEEECCCC
Confidence            34444  69999999873

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.23  E-value=0.0033  Score=52.47  Aligned_cols=78  Identities=19%  Similarity=0.265  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----H-cCCC--EEE--eCCCchH----HHHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----D-LGAD--VCI--NYKTEDF----VARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~-~g~~--~~~--~~~~~~~----~~~~~~~~~  205 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++++++.++.+.+.    + .+..  ..+  |-.+...    .+.+.+..+
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999988765443    2 3322  222  3333222    233333444


Q ss_pred             CCcccEEEeCCCh
Q 020487          206 GKGVDVILDCMGA  218 (325)
Q Consensus       206 ~~~~d~vi~~~g~  218 (325)
                        ++|+++++.|.
T Consensus        87 --~id~lvnnAg~   97 (265)
T 3lf2_A           87 --CASILVNNAGQ   97 (265)
T ss_dssp             --SCSEEEECCCC
T ss_pred             --CCCEEEECCCC
Confidence              68999999873

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.22  E-value=0.00094  Score=55.95  Aligned_cols=77  Identities=21%  Similarity=0.292  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEE--eCCCchH----HHHHHHHhCCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDF----VARVKEETGGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~----~~~~~~~~~~~~~d~v  212 (325)
                      .+.++||+|+++.+|.++++.+...|++|++++++.++.+.+..... ..+  |-.+...    .+.+.+..+  ++|++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~~~~~~g--~iD~l   91 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNT-LCAQVDVTDKYTFDTAITRAEKIYG--PADAI   91 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTE-EEEECCTTCHHHHHHHHHHHHHHHC--SEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCc-eEEEecCCCHHHHHHHHHHHHHHCC--CCCEE
Confidence            36889999999999999999999999999999998776554322111 222  3333222    233333444  69999


Q ss_pred             EeCCCh
Q 020487          213 LDCMGA  218 (325)
Q Consensus       213 i~~~g~  218 (325)
                      ++++|.
T Consensus        92 vnnAg~   97 (266)
T 3p19_A           92 VNNAGM   97 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999873

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.22  E-value=0.0025  Score=52.57  Aligned_cols=77  Identities=30%  Similarity=0.410  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhHHHH----HHcCCCE-EE--eCCCchHH----HHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADV-CI--NYKTEDFV----ARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~~~~----~~~g~~~-~~--~~~~~~~~----~~~~~~~~~  206 (325)
                      .+.+++|+|++|.+|.++++.+...|++|+++++ ++++.+.+    +..+... .+  |-.+....    +.+.+..+ 
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-   81 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG-   81 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence            3678999999999999999999999999999998 66655433    2334332 22  33332222    22233343 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|+++++.|
T Consensus        82 -~id~lv~nAg   91 (246)
T 2uvd_A           82 -QVDILVNNAG   91 (246)
T ss_dssp             -CCCEEEECCC
T ss_pred             -CCCEEEECCC
Confidence             6899999987

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.22  E-value=0.0027  Score=53.48  Aligned_cols=77  Identities=18%  Similarity=0.366  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H----cCCCE-EE--eCCCch----HHHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D----LGADV-CI--NYKTED----FVARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~----~g~~~-~~--~~~~~~----~~~~~~~~~~~  206 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++++++.++.+... +    .+... .+  |-.+..    ..+.+.+..+ 
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-  104 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG-  104 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence            4789999999999999999999999999999999987654432 2    24332 22  333322    2233333444 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|+++++.|
T Consensus       105 -~id~lv~nAg  114 (277)
T 4fc7_A          105 -RIDILINCAA  114 (277)
T ss_dssp             -CCCEEEECCC
T ss_pred             -CCCEEEECCc
Confidence             6899999997

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.20  E-value=0.0026  Score=52.89  Aligned_cols=77  Identities=23%  Similarity=0.321  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecChhhHHHHH----HcCCCE-EE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVCK----DLGADV-CI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~-~~~~~~~~~~~----~~g~~~-~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .+.++||+|+++.+|.++++.+...|++|+++ .++.++.+.+.    +.+... .+  |-.+...    .+.+.+..+ 
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG-   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence            57899999999999999999999999999997 77776654433    234332 22  3333222    233333444 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|+++++.|
T Consensus        82 -~id~lv~nAg   91 (258)
T 3oid_A           82 -RLDVFVNNAA   91 (258)
T ss_dssp             -CCCEEEECCC
T ss_pred             -CCCEEEECCC
Confidence             6899999987

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.20  E-value=0.00098  Score=54.14  Aligned_cols=96  Identities=15%  Similarity=0.266  Sum_probs=62.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH-
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-  219 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-  219 (325)
                      .+|||+|++|.+|..+++.+...|.+|++++++..+...+.  ..-.++..+-.+ .+.+.+...  ++|+||.++|.. 
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d-~~~~~~~~~--~~d~vi~~a~~~~   79 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSS-LDEVCEVCK--GADAVISAFNPGW   79 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTC-HHHHHHHHT--TCSEEEECCCC--
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCC-HHHHHHHhc--CCCEEEEeCcCCC
Confidence            57999999999999999999999999999999877643221  111222222222 334555554  689999998753 


Q ss_pred             -----------HHHHhhccccCC--CEEEEEeccC
Q 020487          220 -----------YFQRNLGSLNID--GRLFIIGTQG  241 (325)
Q Consensus       220 -----------~~~~~~~~l~~~--g~~v~~g~~~  241 (325)
                                 ....+++.+...  .++|.++...
T Consensus        80 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  114 (227)
T 3dhn_A           80 NNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG  114 (227)
T ss_dssp             ----CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence                       123344444433  4888876544

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.19  E-value=0.0012  Score=54.35  Aligned_cols=77  Identities=23%  Similarity=0.421  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-----cCCCE-EE--eCCCchHHH----HHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LGADV-CI--NYKTEDFVA----RVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-----~g~~~-~~--~~~~~~~~~----~~~~~~~~  206 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+.+     .+... .+  |-.+.....    .+.+..+ 
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   84 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD-   84 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC-
Confidence            46789999999999999999999999999999998876654332     24332 22  323322222    2222233 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|++|.+.|
T Consensus        85 -~~d~vi~~Ag   94 (248)
T 2pnf_A           85 -GIDILVNNAG   94 (248)
T ss_dssp             -CCSEEEECCC
T ss_pred             -CCCEEEECCC
Confidence             6899999987

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.19  E-value=0.0013  Score=54.27  Aligned_cols=80  Identities=21%  Similarity=0.255  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHHHHHHHHh--CCCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVARVKEET--GGKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~~~~~~~--~~~~~  209 (325)
                      .+.+++|+|+++.+|..+++.+...|++|+++.++.++.+.+.    +.+... .+  |-.+....+.+.+..  ...++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            3678999999999999999999999999999999988765443    334432 22  333322222222211  12368


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |++++++|.
T Consensus        84 d~li~~Ag~   92 (247)
T 3lyl_A           84 DILVNNAGI   92 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.19  E-value=0.002  Score=53.52  Aligned_cols=77  Identities=25%  Similarity=0.419  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCC-EEE--eCCCchHH----HHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGAD-VCI--NYKTEDFV----ARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~-~~~--~~~~~~~~----~~~~~~~~~~  207 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+    +..+.. ..+  |-.+....    +.+.+..+  
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--   89 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEG--   89 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC--
Confidence            478899999999999999999999999999999988765433    223433 222  32332222    22222233  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|++|.++|
T Consensus        90 ~id~vi~~Ag   99 (260)
T 3awd_A           90 RVDILVACAG   99 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899999986

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.19  E-value=0.00031  Score=57.70  Aligned_cols=98  Identities=14%  Similarity=0.140  Sum_probs=64.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      ..+|||+|++|.+|..+++.+...| ++|+++++++++.......+. .++..+-.+ .+.+.+...  ++|++|.+.+.
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~-~~~~~Dl~d-~~~~~~~~~--~~D~vv~~a~~   98 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNS-QIIMGDVLN-HAALKQAMQ--GQDIVYANLTG   98 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTE-EEEECCTTC-HHHHHHHHT--TCSEEEEECCS
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCc-EEEEecCCC-HHHHHHHhc--CCCEEEEcCCC
Confidence            3579999999999999999999999 899999998876543221122 222222222 334445444  68999999886


Q ss_pred             HH----HHHhhccccC--CCEEEEEeccC
Q 020487          219 SY----FQRNLGSLNI--DGRLFIIGTQG  241 (325)
Q Consensus       219 ~~----~~~~~~~l~~--~g~~v~~g~~~  241 (325)
                      ..    ...+++.++.  .+++|.++...
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           99 EDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             TTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             CchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            32    3444555543  36898886644

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.19  E-value=0.0014  Score=54.76  Aligned_cols=77  Identities=17%  Similarity=0.229  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH-HHHHHcCCCEE-EeCCCchH----HHHHHHHhCCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVC-INYKTEDF----VARVKEETGGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~~g~~~~-~~~~~~~~----~~~~~~~~~~~~~d~v  212 (325)
                      .+.++||+|+++.+|.++++.+...|++|+++++++++. +.+++.+...+ .|-.+...    .+.+.+..+  ++|++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~iD~l  103 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTS--SLRAV  103 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCS--CCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcC--CCCEE
Confidence            367899999999999999999999999999999887654 34445554322 23333222    222333333  68999


Q ss_pred             EeCCC
Q 020487          213 LDCMG  217 (325)
Q Consensus       213 i~~~g  217 (325)
                      ++++|
T Consensus       104 v~nAg  108 (260)
T 3gem_A          104 VHNAS  108 (260)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.19  E-value=0.0014  Score=55.81  Aligned_cols=77  Identities=17%  Similarity=0.400  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc----CCCE-EE--eCCCchHH----HHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----GADV-CI--NYKTEDFV----ARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~----g~~~-~~--~~~~~~~~----~~~~~~~~~  206 (325)
                      .+.+++|+|++|.+|.+++..+...|++|++++++.++.+... ++    +... .+  |-.+....    +.+.+..+ 
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g-  103 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG-  103 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC-
Confidence            4688999999999999999999999999999999987665432 22    4332 22  33332222    22222333 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       .+|++|+++|
T Consensus       104 -~id~li~~Ag  113 (302)
T 1w6u_A          104 -HPNIVINNAA  113 (302)
T ss_dssp             -SCSEEEECCC
T ss_pred             -CCCEEEECCC
Confidence             6899999987

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.19  E-value=0.0015  Score=54.77  Aligned_cols=77  Identities=23%  Similarity=0.367  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHH----HHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFV----ARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~----~~~~~~~~~~  207 (325)
                      .+.+++|+|++|.+|..++..+...|++|++++++.++.+.+.    +.+... .+  |-.+....    +.+.+..+  
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g--  107 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG--  107 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC--
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCC--
Confidence            4789999999999999999999999999999999887665432    334332 22  33332222    22222333  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|++|+++|
T Consensus       108 ~iD~li~~Ag  117 (272)
T 1yb1_A          108 DVSILVNNAG  117 (272)
T ss_dssp             CCSEEEECCC
T ss_pred             CCcEEEECCC
Confidence            6899999987

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.19  E-value=0.0012  Score=55.03  Aligned_cols=77  Identities=21%  Similarity=0.346  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEE--eCCCchH----HHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDF----VARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~----~~~~~~~~~~~~~d  210 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++.+.+. ++... ..+  |-.+...    .+.+.+..+  ++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g--~iD   83 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFG--GLH   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcC--CCC
Confidence            4688999999999999999999999999999999987765543 33321 222  3333222    222333343  689


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      +++++.|
T Consensus        84 ~lv~~Ag   90 (260)
T 1nff_A           84 VLVNNAG   90 (260)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.18  E-value=0.0033  Score=51.56  Aligned_cols=73  Identities=32%  Similarity=0.520  Sum_probs=51.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEE--eCCCch---HHHHHHHHhCCCcccEEEe
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTED---FVARVKEETGGKGVDVILD  214 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~~---~~~~~~~~~~~~~~d~vi~  214 (325)
                      +.+++|+|++|.+|.++++.+...|++|++++++.++  ..++++. ..+  |-.+..   ..+.+.+..+  ++|++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~g--~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQSLGA-VPLPTDLEKDDPKGLVKRALEALG--GLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHTC-EEEECCTTTSCHHHHHHHHHHHHT--SCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHhhCc-EEEecCCchHHHHHHHHHHHHHcC--CCCEEEE
Confidence            5689999999999999999999999999999988766  2334453 222  322222   2233333444  6899999


Q ss_pred             CCC
Q 020487          215 CMG  217 (325)
Q Consensus       215 ~~g  217 (325)
                      +.|
T Consensus        77 ~Ag   79 (239)
T 2ekp_A           77 AAA   79 (239)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.18  E-value=0.00097  Score=54.96  Aligned_cols=78  Identities=23%  Similarity=0.318  Sum_probs=54.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHHHc-CCC-EEE--eCCCchH----HHHHHHHhCCCcc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKDL-GAD-VCI--NYKTEDF----VARVKEETGGKGV  209 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~~~-g~~-~~~--~~~~~~~----~~~~~~~~~~~~~  209 (325)
                      +.+++|+|++|.+|..+++.+...|  ++|++++++.++.+.++++ +.. ..+  |-.+...    .+.+.+..+..++
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~i   82 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCC
Confidence            5789999999999999999999999  9999999998877766655 222 222  3223222    2222333332268


Q ss_pred             cEEEeCCC
Q 020487          210 DVILDCMG  217 (325)
Q Consensus       210 d~vi~~~g  217 (325)
                      |++|.++|
T Consensus        83 d~li~~Ag   90 (250)
T 1yo6_A           83 SLLINNAG   90 (250)
T ss_dssp             CEEEECCC
T ss_pred             cEEEECCc
Confidence            99999886

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.18  E-value=0.0016  Score=54.05  Aligned_cols=76  Identities=22%  Similarity=0.342  Sum_probs=52.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHH----HHHHHHhCCCc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFV----ARVKEETGGKG  208 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~----~~~~~~~~~~~  208 (325)
                      +.+++|+|++|.+|.++++.+...|++|+++++++++.+.+.    ..+... .+  |-.+....    +.+.+..+  +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g--~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLG--G   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTT--C
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC--C
Confidence            468999999999999999999999999999999887655432    234332 22  33332222    22223333  6


Q ss_pred             ccEEEeCCC
Q 020487          209 VDVILDCMG  217 (325)
Q Consensus       209 ~d~vi~~~g  217 (325)
                      +|++|++.|
T Consensus        80 id~lv~nAg   88 (256)
T 1geg_A           80 FDVIVNNAG   88 (256)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=97.17  E-value=0.0014  Score=55.28  Aligned_cols=77  Identities=23%  Similarity=0.323  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE-EE--eCCCchHHHHHHHHhC-CCcccEEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTEDFVARVKEETG-GKGVDVIL  213 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~~~~~~~~~~~-~~~~d~vi  213 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++++++.++.+.+. +++... .+  |-.+......+.+... ..++|+++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            4788999999999999999999999999999999988776654 455432 22  3333332333333222 23689999


Q ss_pred             eC
Q 020487          214 DC  215 (325)
Q Consensus       214 ~~  215 (325)
                      .+
T Consensus       109 ~~  110 (281)
T 3ppi_A          109 VA  110 (281)
T ss_dssp             EC
T ss_pred             Ec
Confidence            88

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.17  E-value=0.0019  Score=55.68  Aligned_cols=77  Identities=18%  Similarity=0.346  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCC--C-EEE--eCCCchH----HHHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA--D-VCI--NYKTEDF----VARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~--~-~~~--~~~~~~~----~~~~~~~~~  205 (325)
                      .+.++||+|++|.+|..++..+...|++|++++++.++.+.+.    ..+.  . .++  |-.+...    .+.+.+..+
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999999999999988765443    2232  1 222  3333222    222223333


Q ss_pred             CCcccEEEeCCC
Q 020487          206 GKGVDVILDCMG  217 (325)
Q Consensus       206 ~~~~d~vi~~~g  217 (325)
                        ++|++|++.|
T Consensus        87 --~id~lv~nAg   96 (319)
T 3ioy_A           87 --PVSILCNNAG   96 (319)
T ss_dssp             --CEEEEEECCC
T ss_pred             --CCCEEEECCC
Confidence              6899999998

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.17  E-value=0.004  Score=52.44  Aligned_cols=78  Identities=22%  Similarity=0.288  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-------------ChhhHHHHH----HcCCCEE-E--eCCCchH--
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-------------SEEKLAVCK----DLGADVC-I--NYKTEDF--  196 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-------------~~~~~~~~~----~~g~~~~-~--~~~~~~~--  196 (325)
                      .+++++|+|+++.+|.++++.+...|++|+++++             +.++.+.+.    ..+.... +  |-.+...  
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   93 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALR   93 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            4789999999999999999999999999999987             455444332    3343322 2  3333222  


Q ss_pred             --HHHHHHHhCCCcccEEEeCCCh
Q 020487          197 --VARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       197 --~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                        .+.+.+..+  ++|+++++.|.
T Consensus        94 ~~~~~~~~~~g--~id~lvnnAg~  115 (280)
T 3pgx_A           94 ELVADGMEQFG--RLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHC--CCCEEEECCCC
T ss_pred             HHHHHHHHHcC--CCCEEEECCCC
Confidence              233333444  69999999873

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.17  E-value=0.0023  Score=54.58  Aligned_cols=77  Identities=23%  Similarity=0.374  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H--------cCCC-EEE--eCCCchH----HHHHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D--------LGAD-VCI--NYKTEDF----VARVKE  202 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~--------~g~~-~~~--~~~~~~~----~~~~~~  202 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+. +        .+.. ..+  |-.+...    .+.+.+
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999987665432 2        1222 222  3223222    222223


Q ss_pred             HhCCCcccEEEeCCC
Q 020487          203 ETGGKGVDVILDCMG  217 (325)
Q Consensus       203 ~~~~~~~d~vi~~~g  217 (325)
                      ..+  ++|++|+++|
T Consensus        97 ~~g--~id~li~~Ag  109 (303)
T 1yxm_A           97 TFG--KINFLVNNGG  109 (303)
T ss_dssp             HHS--CCCEEEECCC
T ss_pred             HcC--CCCEEEECCC
Confidence            333  6899999987

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.17  E-value=0.0017  Score=53.80  Aligned_cols=76  Identities=21%  Similarity=0.330  Sum_probs=52.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEE--eCCCchHHHHHHHHhC--CCcccEEEeC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDFVARVKEETG--GKGVDVILDC  215 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~~~~~~~~~~--~~~~d~vi~~  215 (325)
                      +++|+|+++.+|.++++.+...|++|++++++.++.+.+. +++.. ..+  |-.+......+.+...  ..++|+++++
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnn   81 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN   81 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEEC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            6899999999999999999999999999999988766554 34432 222  3333332333333221  1268999998


Q ss_pred             CC
Q 020487          216 MG  217 (325)
Q Consensus       216 ~g  217 (325)
                      .|
T Consensus        82 Ag   83 (248)
T 3asu_A           82 AG   83 (248)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.16  E-value=0.0037  Score=52.82  Aligned_cols=77  Identities=21%  Similarity=0.252  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC----------------hhhHHHHH----HcCCCE-EE--eCCCch
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS----------------EEKLAVCK----DLGADV-CI--NYKTED  195 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~----------------~~~~~~~~----~~g~~~-~~--~~~~~~  195 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++++++                .++.+.+.    ..+... .+  |-.+..
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD   89 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            47899999999999999999999999999999876                44443332    234332 22  333322


Q ss_pred             H----HHHHHHHhCCCcccEEEeCCC
Q 020487          196 F----VARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       196 ~----~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .    .+.+.+..+  ++|+++++.|
T Consensus        90 ~v~~~~~~~~~~~g--~id~lv~nAg  113 (286)
T 3uve_A           90 ALKAAVDSGVEQLG--RLDIIVANAG  113 (286)
T ss_dssp             HHHHHHHHHHHHHS--CCCEEEECCC
T ss_pred             HHHHHHHHHHHHhC--CCCEEEECCc
Confidence            2    233333444  6999999987

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.16  E-value=0.0015  Score=54.43  Aligned_cols=77  Identities=22%  Similarity=0.283  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCE-EE--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-CI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++.+..    ++.+... .+  |-.+...    .+.+.+..+  
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--   90 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG--   90 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence            478999999999999999999999999999999988765433    2234332 22  3223221    222233343  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|+++++.|
T Consensus        91 ~iD~lv~~Ag  100 (260)
T 2zat_A           91 GVDILVSNAA  100 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899999987

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.15  E-value=0.0031  Score=52.95  Aligned_cols=78  Identities=24%  Similarity=0.431  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh-------HH----HHHHcCCCE-EE--eCCCch----HHHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-------LA----VCKDLGADV-CI--NYKTED----FVARV  200 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~-------~~----~~~~~g~~~-~~--~~~~~~----~~~~~  200 (325)
                      .+++++|+|+++.+|.++++.+...|++|++++++.++       .+    .++..+... .+  |-.+..    +.+.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            47899999999999999999999999999999988653       22    222334322 22  333322    22333


Q ss_pred             HHHhCCCcccEEEeCCCh
Q 020487          201 KEETGGKGVDVILDCMGA  218 (325)
Q Consensus       201 ~~~~~~~~~d~vi~~~g~  218 (325)
                      .+..+  ++|+++++.|.
T Consensus        85 ~~~~g--~iD~lvnnAG~  100 (274)
T 3e03_A           85 VDTFG--GIDILVNNASA  100 (274)
T ss_dssp             HHHHS--CCCEEEECCCC
T ss_pred             HHHcC--CCCEEEECCCc
Confidence            33444  69999999873

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=97.15  E-value=0.0059  Score=53.03  Aligned_cols=76  Identities=18%  Similarity=0.148  Sum_probs=52.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh----hHHHHHHc------CCCEEEeCCCchHHHHHHHHhCCCcc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE----KLAVCKDL------GADVCINYKTEDFVARVKEETGGKGV  209 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~----~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~~  209 (325)
                      +.+|||+|++|.+|..+++.+...|.+|++++++..    ....++..      ..-.++..+-.+ .+.+.+...  ++
T Consensus        25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~--~~  101 (351)
T 3ruf_A           25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRD-LTTCEQVMK--GV  101 (351)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTC-HHHHHHHTT--TC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCC-HHHHHHHhc--CC
Confidence            678999999999999999999999999999998543    23333332      222333333222 334555554  79


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |+||.|++.
T Consensus       102 d~Vih~A~~  110 (351)
T 3ruf_A          102 DHVLHQAAL  110 (351)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999873

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.15  E-value=0.0035  Score=52.80  Aligned_cols=78  Identities=29%  Similarity=0.422  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCC---C-EEE--eCCCch----HHHHHHHHh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA---D-VCI--NYKTED----FVARVKEET  204 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~---~-~~~--~~~~~~----~~~~~~~~~  204 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++++++++.+...    +.+.   . ..+  |-.+..    ..+.+.+..
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999988765432    3332   1 122  333322    223333334


Q ss_pred             CCCcccEEEeCCCh
Q 020487          205 GGKGVDVILDCMGA  218 (325)
Q Consensus       205 ~~~~~d~vi~~~g~  218 (325)
                      +  ++|++++++|.
T Consensus        90 g--~id~lv~nAg~  101 (281)
T 3svt_A           90 G--RLHGVVHCAGG  101 (281)
T ss_dssp             S--CCCEEEECCCC
T ss_pred             C--CCCEEEECCCc
Confidence            4  68999999884

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.14  E-value=0.0018  Score=48.31  Aligned_cols=93  Identities=16%  Similarity=0.218  Sum_probs=61.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      +.+++|+|+ |.+|..+++.+...|++|+++++++++.+.+++.+.. .+..+..+ .+.+.+. +-.++|+++.|++..
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~-~~~~d~~~-~~~l~~~-~~~~~d~vi~~~~~~   81 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATH-AVIANATE-ENELLSL-GIRNFEYVIVAIGAN   81 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSE-EEECCTTC-HHHHHTT-TGGGCSEEEECCCSC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCE-EEEeCCCC-HHHHHhc-CCCCCCEEEECCCCc
Confidence            467999998 9999999999999999999999988777666555543 33222222 2223222 224789999999863


Q ss_pred             -HH----HHhhccccCCCEEEEE
Q 020487          220 -YF----QRNLGSLNIDGRLFII  237 (325)
Q Consensus       220 -~~----~~~~~~l~~~g~~v~~  237 (325)
                       ..    ....+.+.+. +++..
T Consensus        82 ~~~~~~~~~~~~~~~~~-~ii~~  103 (144)
T 2hmt_A           82 IQASTLTTLLLKELDIP-NIWVK  103 (144)
T ss_dssp             HHHHHHHHHHHHHTTCS-EEEEE
T ss_pred             hHHHHHHHHHHHHcCCC-eEEEE
Confidence             21    2223344453 66554

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.14  E-value=0.0041  Score=52.43  Aligned_cols=78  Identities=18%  Similarity=0.315  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhHHHHH----Hc-CCCE-EE--eCCCchH----HHHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCK----DL-GADV-CI--NYKTEDF----VARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~~~~~----~~-g~~~-~~--~~~~~~~----~~~~~~~~~  205 (325)
                      .+.++||+|+++.+|.++++.+...|++|+++++ +.++.+.+.    .. +... .+  |-.+...    .+.+.+..+
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  103 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG  103 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence            3689999999999999999999999999999998 444443332    22 3222 22  2223222    223333333


Q ss_pred             CCcccEEEeCCCh
Q 020487          206 GKGVDVILDCMGA  218 (325)
Q Consensus       206 ~~~~d~vi~~~g~  218 (325)
                        ++|++++++|.
T Consensus       104 --~iD~lv~nAg~  114 (281)
T 3v2h_A          104 --GADILVNNAGV  114 (281)
T ss_dssp             --SCSEEEECCCC
T ss_pred             --CCCEEEECCCC
Confidence              68999999874

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.13  E-value=0.0028  Score=54.65  Aligned_cols=78  Identities=24%  Similarity=0.359  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC----------hhhHH----HHHHcCCCEEE---eCCCch----HH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS----------EEKLA----VCKDLGADVCI---NYKTED----FV  197 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~----------~~~~~----~~~~~g~~~~~---~~~~~~----~~  197 (325)
                      .+.++||+|+++.+|.++++.+...|++|++++++          .++.+    .++..+.....   |-.+..    +.
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  105 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI  105 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            47899999999999999999999999999999876          33332    23334433222   222222    22


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 020487          198 ARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       198 ~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      +.+.+..+  ++|++|+++|.
T Consensus       106 ~~~~~~~g--~iD~lv~nAg~  124 (322)
T 3qlj_A          106 QTAVETFG--GLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHS--CCCEEECCCCC
T ss_pred             HHHHHHcC--CCCEEEECCCC
Confidence            33333444  68999999873

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.13  E-value=0.00069  Score=57.31  Aligned_cols=96  Identities=10%  Similarity=0.076  Sum_probs=64.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh--
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA--  218 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~--  218 (325)
                      +|||+|++|.+|..+++.+... |.+|++++++.++...+...+.. ++..+-.+ .+.+.+...  ++|+||.+.+.  
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~-~~~~D~~d-~~~l~~~~~--~~d~vi~~a~~~~   77 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVS-VRQLDYFN-QESMVEAFK--GMDTVVFIPSIIH   77 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBE-EEECCTTC-HHHHHHHTT--TCSEEEECCCCCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCE-EEEcCCCC-HHHHHHHHh--CCCEEEEeCCCCc
Confidence            5899999999999999998887 89999999998765444333332 33222222 334555554  68999999874  


Q ss_pred             ------HHHHHhhccccCC--CEEEEEeccC
Q 020487          219 ------SYFQRNLGSLNID--GRLFIIGTQG  241 (325)
Q Consensus       219 ------~~~~~~~~~l~~~--g~~v~~g~~~  241 (325)
                            .....+++.++..  +++|.++...
T Consensus        78 ~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           78 PSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             SHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             cchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence                  1233445555443  5888887654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.13  E-value=0.0036  Score=53.80  Aligned_cols=77  Identities=17%  Similarity=0.267  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC------------hhhHHH----HHHcCCCEE-E--eCCCchH---
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS------------EEKLAV----CKDLGADVC-I--NYKTEDF---  196 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~------------~~~~~~----~~~~g~~~~-~--~~~~~~~---  196 (325)
                      .+.++||+|+++.+|.++++.+...|++|++++++            .++.+.    +++.+.... +  |-.+...   
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  124 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA  124 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            47899999999999999999999999999999865            333332    233444332 2  3333222   


Q ss_pred             -HHHHHHHhCCCcccEEEeCCC
Q 020487          197 -VARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       197 -~~~~~~~~~~~~~d~vi~~~g  217 (325)
                       .+.+.+..+  ++|++|+++|
T Consensus       125 ~~~~~~~~~g--~iD~lVnnAg  144 (317)
T 3oec_A          125 VVDEALAEFG--HIDILVSNVG  144 (317)
T ss_dssp             HHHHHHHHHS--CCCEEEECCC
T ss_pred             HHHHHHHHcC--CCCEEEECCC
Confidence             223333344  6999999987

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.12  E-value=0.0016  Score=54.27  Aligned_cols=72  Identities=25%  Similarity=0.451  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEE--EeCCCch----HHHHHHHHhCCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTED----FVARVKEETGGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~--~~~~~~~----~~~~~~~~~~~~~~d~v  212 (325)
                      .|+++||+|+++++|.++++.+...|++|+++.+++++.     +.....  .|-.+..    ..+.+.+..|  ++|++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G--~iDil   82 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-----LPEELFVEADLTTKEGCAIVAEATRQRLG--GVDVI   82 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----SCTTTEEECCTTSHHHHHHHHHHHHHHTS--SCSEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-----CCcEEEEEcCCCCHHHHHHHHHHHHHHcC--CCCEE
Confidence            489999999999999999999999999999999875421     111112  2333322    2334444454  69999


Q ss_pred             EeCCC
Q 020487          213 LDCMG  217 (325)
Q Consensus       213 i~~~g  217 (325)
                      +++.|
T Consensus        83 VnnAG   87 (261)
T 4h15_A           83 VHMLG   87 (261)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99876

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.12  E-value=0.00059  Score=56.33  Aligned_cols=75  Identities=16%  Similarity=0.127  Sum_probs=52.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-e--cChhhHHHHH-Hc-CCCEEEeCCC-chHHHHHHHHhCCCcccEEE
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-A--GSEEKLAVCK-DL-GADVCINYKT-EDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~-~--~~~~~~~~~~-~~-g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi  213 (325)
                      +.+++|+|+++.+|.++++.+...|++|+++ .  ++.++.+.+. ++ +. .+.+... ....+.+.+..+  ++|+++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~g--~iD~lv   77 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-IALAEQKPERLVDATLQHGE--AIDTIV   77 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCGGGHHHHHGGGSS--CEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHHHHHHHHHHHHcC--CCCEEE
Confidence            4679999999999999999999999999999 6  8887766544 44 32 2333222 223333333333  699999


Q ss_pred             eCCC
Q 020487          214 DCMG  217 (325)
Q Consensus       214 ~~~g  217 (325)
                      ++.|
T Consensus        78 ~~Ag   81 (244)
T 1zmo_A           78 SNDY   81 (244)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.12  E-value=0.0052  Score=51.06  Aligned_cols=43  Identities=21%  Similarity=0.112  Sum_probs=37.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  181 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~  181 (325)
                      .+.+++|+|++|.+|..++..+...|++|++++++.++.+.+.
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~   48 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETV   48 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Confidence            4678999999999999999999999999999999988765543

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.12  E-value=0.0028  Score=53.27  Aligned_cols=78  Identities=17%  Similarity=0.238  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-------------ChhhHHHH----HHcCCCEE-E--eCCCchH--
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-------------SEEKLAVC----KDLGADVC-I--NYKTEDF--  196 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-------------~~~~~~~~----~~~g~~~~-~--~~~~~~~--  196 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++++             +.++.+..    +..+.... +  |-.+...  
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR   89 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            4789999999999999999999999999999987             44444332    23343322 2  3333222  


Q ss_pred             --HHHHHHHhCCCcccEEEeCCCh
Q 020487          197 --VARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       197 --~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                        .+.+.+..+  ++|+++++.|.
T Consensus        90 ~~~~~~~~~~g--~id~lvnnAg~  111 (277)
T 3tsc_A           90 KVVDDGVAALG--RLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHS--CCCEEEECCCC
T ss_pred             HHHHHHHHHcC--CCCEEEECCCC
Confidence              223333344  69999999873

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.11  E-value=0.0031  Score=52.69  Aligned_cols=78  Identities=15%  Similarity=0.206  Sum_probs=53.5

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCEEE--eCCCchH----HHHHHHHhC
Q 020487          138 SPGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTEDF----VARVKEETG  205 (325)
Q Consensus       138 ~~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~~----~~~~~~~~~  205 (325)
                      .++.+++|+|++  +.+|.++++.+...|++|+++++++...+.++    +.+....+  |-.+...    .+.+.+..+
T Consensus        12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   91 (271)
T 3ek2_A           12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWD   91 (271)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            468899999998  99999999999999999999998865444333    33432333  3333222    223333333


Q ss_pred             CCcccEEEeCCC
Q 020487          206 GKGVDVILDCMG  217 (325)
Q Consensus       206 ~~~~d~vi~~~g  217 (325)
                        ++|++|+++|
T Consensus        92 --~id~lv~nAg  101 (271)
T 3ek2_A           92 --SLDGLVHSIG  101 (271)
T ss_dssp             --CEEEEEECCC
T ss_pred             --CCCEEEECCc
Confidence              6999999987

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.11  E-value=0.0026  Score=53.50  Aligned_cols=77  Identities=31%  Similarity=0.403  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc---CCCEEE--eCCCchHH----HHHHHHhCCCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL---GADVCI--NYKTEDFV----ARVKEETGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~~~~--~~~~~~~~----~~~~~~~~~~~  208 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++.+... ++   +.-..+  |-.+....    +.+.+..+  +
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~  105 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSA--R  105 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCS--C
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcC--C
Confidence            4788999999999999999999999999999999987665433 22   211122  22222222    22223333  6


Q ss_pred             ccEEEeCCC
Q 020487          209 VDVILDCMG  217 (325)
Q Consensus       209 ~d~vi~~~g  217 (325)
                      +|++|+++|
T Consensus       106 iD~lvnnAg  114 (276)
T 2b4q_A          106 LDILVNNAG  114 (276)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999987

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.11  E-value=0.004  Score=52.13  Aligned_cols=78  Identities=26%  Similarity=0.327  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhHHHH----HHcCCCE-EE--eCCCch----HHHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADV-CI--NYKTED----FVARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~~~~----~~~g~~~-~~--~~~~~~----~~~~~~~~~~~  206 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++.+ +.++.+.+    ++.+... .+  |-.+..    +.+.+.+..+ 
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g-  105 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG-  105 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC-
Confidence            4789999999999999999999999999999887 44444332    2344432 22  333322    2233334444 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       ++|++++++|.
T Consensus       106 -~id~lv~nAg~  116 (269)
T 4dmm_A          106 -RLDVLVNNAGI  116 (269)
T ss_dssp             -CCCEEEECCCC
T ss_pred             -CCCEEEECCCC
Confidence             68999999873

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.10  E-value=0.0055  Score=48.97  Aligned_cols=98  Identities=12%  Similarity=0.146  Sum_probs=69.1

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHHhC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEETG  205 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~  205 (325)
                      ....+.++++||-+|+ |. |..++.+++. +.+|++++.+++..+.+++    .+..   .++..+.....      ..
T Consensus        49 ~~l~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~------~~  119 (204)
T 3njr_A           49 AALAPRRGELLWDIGG-GS-GSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL------AD  119 (204)
T ss_dssp             HHHCCCTTCEEEEETC-TT-CHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG------TT
T ss_pred             HhcCCCCCCEEEEecC-CC-CHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc------cc
Confidence            4556788999999997 43 8888888888 8999999999998776653    4443   23333332211      11


Q ss_pred             CCcccEEEeCCCh--HHHHHhhccccCCCEEEEEec
Q 020487          206 GKGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       206 ~~~~d~vi~~~g~--~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ...||+|+...+.  ..+..+.+.|+|+|+++....
T Consensus       120 ~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  155 (204)
T 3njr_A          120 LPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAV  155 (204)
T ss_dssp             SCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred             CCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence            2369999976543  246777889999999998754

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.10  E-value=0.0025  Score=51.98  Aligned_cols=75  Identities=20%  Similarity=0.301  Sum_probs=53.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EE--EeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VC--INYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      ++||+|+++.+|.+++..+...|++|+++++++++.+.+. +++.. ..  .|-.+......+.+.... .+|+++++.|
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~d~lv~~Ag   81 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDS-IPSTVVHSAG   81 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSS-CCSEEEECCC
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhh-cCCEEEEeCC
Confidence            5899999999999999999999999999999998877665 34322 12  233333333333333332 3599999987

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.09  E-value=0.0033  Score=52.42  Aligned_cols=100  Identities=18%  Similarity=0.327  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh---HHHH----HHcCCCE-EE--eCCCchH----HHHHHHHh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK---LAVC----KDLGADV-CI--NYKTEDF----VARVKEET  204 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~---~~~~----~~~g~~~-~~--~~~~~~~----~~~~~~~~  204 (325)
                      .+.+++|+|+++++|.++++.+...|++|+++.++...   .+.+    +..+... .+  |-.+...    .+.+.+..
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999998765433   2222    2233322 22  3333222    23333334


Q ss_pred             CCCcccEEEeCCCh-----------HH---------------HHHhhccccCCCEEEEEecc
Q 020487          205 GGKGVDVILDCMGA-----------SY---------------FQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       205 ~~~~~d~vi~~~g~-----------~~---------------~~~~~~~l~~~g~~v~~g~~  240 (325)
                      +  ++|+++++.|.           +.               +..++..|+++|++|.+++.
T Consensus        90 g--~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~  149 (262)
T 3ksu_A           90 G--KVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATS  149 (262)
T ss_dssp             C--SEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred             C--CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEech
Confidence            4  69999999882           00               12334556678999988653

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.08  E-value=0.0037  Score=53.91  Aligned_cols=76  Identities=21%  Similarity=0.405  Sum_probs=50.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-----hhhHHHH----HHcCCC-EEE--eCCCchH----HHHHHHH
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-----EEKLAVC----KDLGAD-VCI--NYKTEDF----VARVKEE  203 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~-----~~~~~~~----~~~g~~-~~~--~~~~~~~----~~~~~~~  203 (325)
                      +.+++|+|++|.+|.++++.+...|++|++++++     .++.+.+    +..+.. ..+  |-.+...    .+.+.+.
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~   84 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE   84 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999998775     2333322    223433 222  3333222    2233333


Q ss_pred             hCCCcccEEEeCCC
Q 020487          204 TGGKGVDVILDCMG  217 (325)
Q Consensus       204 ~~~~~~d~vi~~~g  217 (325)
                      .+  ++|++++++|
T Consensus        85 ~g--~iD~lVnnAG   96 (324)
T 3u9l_A           85 DG--RIDVLIHNAG   96 (324)
T ss_dssp             HS--CCSEEEECCC
T ss_pred             cC--CCCEEEECCC
Confidence            44  6999999998

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.08  E-value=0.0013  Score=55.26  Aligned_cols=77  Identities=21%  Similarity=0.201  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhHHHHH-Hc----CCCE-EE--eCCCc----hHH----HHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCK-DL----GADV-CI--NYKTE----DFV----ARVK  201 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~~~~~-~~----g~~~-~~--~~~~~----~~~----~~~~  201 (325)
                      .+.+++|+|++|.+|.++++.+...|++|+++++ ++++.+.+. ++    +... .+  |-.+.    ...    +.+.
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999 776655432 22    4332 22  33333    222    2222


Q ss_pred             HHhCCCcccEEEeCCC
Q 020487          202 EETGGKGVDVILDCMG  217 (325)
Q Consensus       202 ~~~~~~~~d~vi~~~g  217 (325)
                      +..+  ++|++|++.|
T Consensus        90 ~~~g--~id~lv~nAg  103 (276)
T 1mxh_A           90 RAFG--RCDVLVNNAS  103 (276)
T ss_dssp             HHHS--CCCEEEECCC
T ss_pred             HhcC--CCCEEEECCC
Confidence            3333  6899999987

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.08  E-value=0.0043  Score=51.95  Aligned_cols=78  Identities=22%  Similarity=0.408  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-hhhHHHH----HHcCCCE-EE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVC----KDLGADV-CI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~-~~~~~~~----~~~g~~~-~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++++++ ++..+.+    ++.+... ++  |-.+...    .+.+.+..+ 
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-  106 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG-  106 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC-
Confidence            47899999999999999999999999999999984 4333332    3344332 23  2222221    222333333 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       ++|++|+++|.
T Consensus       107 -~id~li~nAg~  117 (271)
T 4iin_A          107 -GLSYLVNNAGV  117 (271)
T ss_dssp             -SCCEEEECCCC
T ss_pred             -CCCEEEECCCc
Confidence             69999999874

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.08  E-value=0.0019  Score=53.92  Aligned_cols=79  Identities=22%  Similarity=0.315  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC---CEEEEEecChhhHHHHHHc---CCC-EEE--eCCCchH----HHHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQG---VRVFVTAGSEEKLAVCKDL---GAD-VCI--NYKTEDF----VARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g---~~v~~~~~~~~~~~~~~~~---g~~-~~~--~~~~~~~----~~~~~~~~~  205 (325)
                      .+.+++|+|++|.+|..+++.+...|   ++|++++++.++.+.++++   +.. ..+  |-.+...    .+.+.+..+
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   99 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK   99 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcC
Confidence            46789999999999999999999999   9999999987654433322   322 222  3333222    223333333


Q ss_pred             CCcccEEEeCCC
Q 020487          206 GKGVDVILDCMG  217 (325)
Q Consensus       206 ~~~~d~vi~~~g  217 (325)
                      ..++|++|.++|
T Consensus       100 ~~~id~li~~Ag  111 (267)
T 1sny_A          100 DQGLNVLFNNAG  111 (267)
T ss_dssp             GGCCSEEEECCC
T ss_pred             CCCccEEEECCC
Confidence            225899999987

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.08  E-value=0.0039  Score=51.43  Aligned_cols=77  Identities=19%  Similarity=0.292  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcC--CC-EEE--eCCCchHH----HHHHHHhCCCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG--AD-VCI--NYKTEDFV----ARVKEETGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g--~~-~~~--~~~~~~~~----~~~~~~~~~~~  208 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++.+... ++.  .. ..+  |..+....    +.+.+..+  +
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~   82 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG--P   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS--S
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhC--C
Confidence            4678999999999999999999999999999999887665443 332  11 223  33332222    22222333  6


Q ss_pred             ccEEEeCCC
Q 020487          209 VDVILDCMG  217 (325)
Q Consensus       209 ~d~vi~~~g  217 (325)
                      +|++|++.|
T Consensus        83 id~li~~Ag   91 (251)
T 1zk4_A           83 VSTLVNNAG   91 (251)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999987

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.07  E-value=0.0035  Score=52.79  Aligned_cols=77  Identities=25%  Similarity=0.404  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H---cCC---C-EEE--eCCCchH----HHHHHHHh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LGA---D-VCI--NYKTEDF----VARVKEET  204 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g~---~-~~~--~~~~~~~----~~~~~~~~  204 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++++++.++.+.+. +   .+.   . ..+  |-.+...    .+.+.+..
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999987765443 2   232   2 222  3333222    22233334


Q ss_pred             CCCcccEEEeCCC
Q 020487          205 GGKGVDVILDCMG  217 (325)
Q Consensus       205 ~~~~~d~vi~~~g  217 (325)
                      +  ++|++|++.|
T Consensus        85 g--~iD~lv~nAg   95 (280)
T 1xkq_A           85 G--KIDVLVNNAG   95 (280)
T ss_dssp             S--CCCEEEECCC
T ss_pred             C--CCCEEEECCC
Confidence            3  6899999987

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.07  E-value=0.0017  Score=53.85  Aligned_cols=77  Identities=26%  Similarity=0.359  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh--HHHHHHcCCCEE-E--eCCCchH----HHHHHHHhCCCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGADVC-I--NYKTEDF----VARVKEETGGKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~--~~~~~~~g~~~~-~--~~~~~~~----~~~~~~~~~~~~~  209 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++  .+.+++.+.... +  |-.+...    .+.+.+..+  ++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g--~i   80 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG--GV   80 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS--SC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC--CC
Confidence            36789999999999999999999999999999987652  122333343322 2  2222222    222223333  68


Q ss_pred             cEEEeCCC
Q 020487          210 DVILDCMG  217 (325)
Q Consensus       210 d~vi~~~g  217 (325)
                      |+++++.|
T Consensus        81 d~lv~~Ag   88 (255)
T 2q2v_A           81 DILVNNAG   88 (255)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.07  E-value=0.0023  Score=54.12  Aligned_cols=77  Identities=18%  Similarity=0.261  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHHHHH----HHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVARV----KEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~~~----~~~~~~~  207 (325)
                      .+.+++|+|++|.+|..+++.+...|++|+++.++.++.+.+.    +.+... .+  |-.+....+.+    .+..+  
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~--  120 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK--  120 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS--
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcC--
Confidence            3678999999999999999999999999999888877654432    234332 22  33332222222    22223  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|++|.++|
T Consensus       121 ~id~li~~Ag  130 (285)
T 2c07_A          121 NVDILVNNAG  130 (285)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899999987

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.06  E-value=0.0038  Score=51.89  Aligned_cols=76  Identities=20%  Similarity=0.301  Sum_probs=51.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh--HHHHH-H---cCCCE-EE--eCCCchH----HHHHHHHhCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCK-D---LGADV-CI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~--~~~~~-~---~g~~~-~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      +.+++|+|++|.+|.++++.+...|++|++++++.++  .+.+. +   .+... .+  |-.+...    .+.+.+..+ 
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-   80 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG-   80 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT-
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC-
Confidence            5789999999999999999998889999999988766  43322 2   24332 22  3333222    223333344 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|++|++.|
T Consensus        81 -~iD~lv~nAg   90 (258)
T 3a28_C           81 -GFDVLVNNAG   90 (258)
T ss_dssp             -CCCEEEECCC
T ss_pred             -CCCEEEECCC
Confidence             6899999987

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.06  E-value=0.0018  Score=53.53  Aligned_cols=77  Identities=19%  Similarity=0.312  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHHH----HHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVA----RVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~----~~~~~~~~~  207 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+.    ..+... .+  |-.+.....    .+.+..+  
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--   87 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG--   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC--
Confidence            4689999999999999999999999999999999987654332    234332 22  323322222    2222333  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|++|.+.|
T Consensus        88 ~~d~vi~~Ag   97 (255)
T 1fmc_A           88 KVDILVNNAG   97 (255)
T ss_dssp             SCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899999987

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.06  E-value=0.0022  Score=54.00  Aligned_cols=77  Identities=21%  Similarity=0.233  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHH----HHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFV----ARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~----~~~~~~~~~~  207 (325)
                      .+++++|+|+++.+|.++++.+...|++|+++++++++.+.+.    ..+... .+  |-.+....    +.+.+.   .
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~---g  108 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI---A  108 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH---S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh---C
Confidence            4789999999999999999999999999999999887654432    334332 22  33332222    222222   3


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|++++++|.
T Consensus       109 ~iD~lvnnAg~  119 (275)
T 4imr_A          109 PVDILVINASA  119 (275)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999883

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.05  E-value=0.003  Score=52.57  Aligned_cols=79  Identities=25%  Similarity=0.307  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHHHHHHHh-C--CCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVARVKEET-G--GKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~~~~~~~-~--~~~  208 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++.+.+.    ..+.. ..+  |-.+......+.+.. .  ...
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            3678999999999999999999999999999999887665432    22432 222  333322222222211 0  126


Q ss_pred             ccEEEeCCC
Q 020487          209 VDVILDCMG  217 (325)
Q Consensus       209 ~d~vi~~~g  217 (325)
                      +|+++++.|
T Consensus        84 id~lvnnAg   92 (260)
T 2qq5_A           84 LDVLVNNAY   92 (260)
T ss_dssp             CCEEEECCC
T ss_pred             ceEEEECCc
Confidence            899999994

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.04  E-value=0.0038  Score=53.14  Aligned_cols=77  Identities=23%  Similarity=0.419  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCC---C-EEE--eCCCchH----HHHHHHHh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA---D-VCI--NYKTEDF----VARVKEET  204 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~---~-~~~--~~~~~~~----~~~~~~~~  204 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++.+.+.    +.+.   . ..+  |-.+...    .+.+.+..
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            4788999999999999999999999999999999987665432    2232   2 222  3333222    22233334


Q ss_pred             CCCcccEEEeCCC
Q 020487          205 GGKGVDVILDCMG  217 (325)
Q Consensus       205 ~~~~~d~vi~~~g  217 (325)
                      +  ++|++|+++|
T Consensus       105 g--~iD~lvnnAG  115 (297)
T 1xhl_A          105 G--KIDILVNNAG  115 (297)
T ss_dssp             S--CCCEEEECCC
T ss_pred             C--CCCEEEECCC
Confidence            4  6899999987

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.04  E-value=0.005  Score=51.85  Aligned_cols=78  Identities=26%  Similarity=0.339  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhHHHH----HHcCCCE-EE--eCCCch----HHHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADV-CI--NYKTED----FVARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~~~~----~~~g~~~-~~--~~~~~~----~~~~~~~~~~~  206 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++++ +.++.+.+    +..+... .+  |-.+..    ..+.+.+..+ 
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g-  106 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG-  106 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS-
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-
Confidence            5789999999999999999999999999999985 55544332    2344432 22  333322    2333444444 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       ++|++++++|.
T Consensus       107 -~iD~lvnnAg~  117 (280)
T 4da9_A          107 -RIDCLVNNAGI  117 (280)
T ss_dssp             -CCCEEEEECC-
T ss_pred             -CCCEEEECCCc
Confidence             68999999875

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.03  E-value=0.0019  Score=53.75  Aligned_cols=77  Identities=22%  Similarity=0.390  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhHHHH----HHcCCC-EEE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGAD-VCI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~~~~----~~~g~~-~~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .+.+++|+|++|.+|..+++.+...|++|+++++ +.++.+.+    ++.+.. ..+  |-.+...    .+.+.+..+ 
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-   84 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG-   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC-
Confidence            3678999999999999999999999999999998 66654433    223432 222  3222222    222222333 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|++|+++|
T Consensus        85 -~id~li~~Ag   94 (261)
T 1gee_A           85 -KLDVMINNAG   94 (261)
T ss_dssp             -CCCEEEECCC
T ss_pred             -CCCEEEECCC
Confidence             6899999987

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.00  E-value=0.003  Score=53.09  Aligned_cols=80  Identities=24%  Similarity=0.320  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH---cCCC-EEE--eCCCchHHHHHHHHh-CCCcccE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD---LGAD-VCI--NYKTEDFVARVKEET-GGKGVDV  211 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~---~g~~-~~~--~~~~~~~~~~~~~~~-~~~~~d~  211 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++++++...+..++   .+.. ..+  |-.+......+.+.. ...++|+
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~  109 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDV  109 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcE
Confidence            47899999999999999999999999999999976554443333   3322 122  333322222222211 1126899


Q ss_pred             EEeCCCh
Q 020487          212 ILDCMGA  218 (325)
Q Consensus       212 vi~~~g~  218 (325)
                      +++++|.
T Consensus       110 lv~nAg~  116 (273)
T 3uf0_A          110 LVNNAGI  116 (273)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999873

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.00  E-value=0.0047  Score=51.49  Aligned_cols=77  Identities=23%  Similarity=0.467  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCc-hHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcC-CC-EEE--eCCCchH----HHHHHHHhC
Q 020487          139 PGESFLVHGGSS-GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLG-AD-VCI--NYKTEDF----VARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g-~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g-~~-~~~--~~~~~~~----~~~~~~~~~  205 (325)
                      .+++++|+|++| ++|..+++.+...|++|++++++.++.+...    +.+ .. ..+  |-.+...    .+.+.+..+
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  100 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG  100 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence            478999999975 7999999999999999999999988765443    222 12 222  3333222    233333344


Q ss_pred             CCcccEEEeCCC
Q 020487          206 GKGVDVILDCMG  217 (325)
Q Consensus       206 ~~~~d~vi~~~g  217 (325)
                        .+|++|++.|
T Consensus       101 --~id~li~~Ag  110 (266)
T 3o38_A          101 --RLDVLVNNAG  110 (266)
T ss_dssp             --CCCEEEECCC
T ss_pred             --CCcEEEECCC
Confidence              6899999987

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.00  E-value=0.0012  Score=54.72  Aligned_cols=75  Identities=13%  Similarity=0.023  Sum_probs=52.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH---HcCCCE-EEeCCC-chHHHHHHHHhCCCcccEEEeC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK---DLGADV-CINYKT-EDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~---~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .+++|+|+++.+|.++++.+...|++|++++++.++.+.+.   ..+.+. .++... ....+.+.+..+  ++|+++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g--~iD~lv~n   79 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYG--QVDVLVSN   79 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHS--CCCEEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhC--CCCEEEEC
Confidence            36899999999999999999999999999998877665443   234332 222222 223344444444  68999998


Q ss_pred             CC
Q 020487          216 MG  217 (325)
Q Consensus       216 ~g  217 (325)
                      .|
T Consensus        80 Ag   81 (254)
T 1zmt_A           80 DI   81 (254)
T ss_dssp             CC
T ss_pred             CC
Confidence            86

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.99  E-value=0.0044  Score=52.35  Aligned_cols=75  Identities=32%  Similarity=0.423  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE--EE--eCCCchHH----HHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV--CI--NYKTEDFV----ARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~--~~--~~~~~~~~----~~~~~~~~~  206 (325)
                      .+.+++|+|++|.+|..+++.+...|++|+++++++++.+.+.    +.+...  .+  |-.+....    +.+.+..+ 
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g-  105 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG-  105 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC-
Confidence            3688999999999999999999999999999999988765443    334322  22  33332222    22223333 


Q ss_pred             CcccEEEeC
Q 020487          207 KGVDVILDC  215 (325)
Q Consensus       207 ~~~d~vi~~  215 (325)
                       ++|++|++
T Consensus       106 -~iD~li~n  113 (286)
T 1xu9_A          106 -GLDMLILN  113 (286)
T ss_dssp             -SCSEEEEC
T ss_pred             -CCCEEEEC
Confidence             68999988

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.98  E-value=0.0018  Score=53.39  Aligned_cols=76  Identities=25%  Similarity=0.269  Sum_probs=52.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc----CCC-EEE--eCCCchH----HHHHHHHhCCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----GAD-VCI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~----g~~-~~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      +.+++|+|++|.+|..++..+...|++|++++++.++.+.+. ++    +.. ..+  |-.+...    .+.+.+..+  
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFG--   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC--
Confidence            568999999999999999999999999999999987765443 22    222 222  3233222    222223333  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|++|++.|
T Consensus        80 ~id~li~~Ag   89 (250)
T 2cfc_A           80 AIDVLVNNAG   89 (250)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899999986

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.97  E-value=0.0018  Score=53.61  Aligned_cols=78  Identities=23%  Similarity=0.408  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-hhhHHHH----HHcCCC-EEE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVC----KDLGAD-VCI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~-~~~~~~~----~~~g~~-~~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++ .++.+.+    +..+.. ..+  |-.+...    .+.+.+..+ 
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-   84 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG-   84 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC-
Confidence            36789999999999999999999999999999988 5554433    222332 222  3222221    122223333 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       ++|++|+++|.
T Consensus        85 -~id~vi~~Ag~   95 (258)
T 3afn_B           85 -GIDVLINNAGG   95 (258)
T ss_dssp             -SCSEEEECCCC
T ss_pred             -CCCEEEECCCC
Confidence             68999999874

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.97  E-value=0.00018  Score=60.43  Aligned_cols=74  Identities=23%  Similarity=0.347  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCch----HHHHHHHHhCCCcccEEEe
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED----FVARVKEETGGKGVDVILD  214 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~d~vi~  214 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++++++.+..+....+    ..|-.+..    ..+.+.+..+  ++|++++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~Dv~~~~~~~~~~~~~~~~~g--~iD~lvn  100 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHL----PGDLREAAYADGLPGAVAAGLG--RLDIVVN  100 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEEC----CCCTTSHHHHHHHHHHHHHHHS--CCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhcc----CcCCCCHHHHHHHHHHHHHhcC--CCCEEEE
Confidence            478999999999999999999999999999999876543221111    11222222    1223333444  6899999


Q ss_pred             CCCh
Q 020487          215 CMGA  218 (325)
Q Consensus       215 ~~g~  218 (325)
                      ++|.
T Consensus       101 nAg~  104 (266)
T 3uxy_A          101 NAGV  104 (266)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9873

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=96.97  E-value=0.0061  Score=50.72  Aligned_cols=77  Identities=23%  Similarity=0.327  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecChh---hHHHHH-HcCCCEEE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVCK-DLGADVCI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~~---~~~~~~-~~g~~~~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .+.+++|+|++  |.+|.++++.+...|++|++++++++   ..+.+. ..+....+  |-.+...    .+.+.+..+ 
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-   85 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG-   85 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC-
Confidence            36789999998  89999999998888999999998875   223332 23433333  3333222    222333343 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|+++++.|
T Consensus        86 -~iD~lv~~Ag   95 (261)
T 2wyu_A           86 -GLDYLVHAIA   95 (261)
T ss_dssp             -SEEEEEECCC
T ss_pred             -CCCEEEECCC
Confidence             6899999987

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.96  E-value=0.0035  Score=52.52  Aligned_cols=74  Identities=22%  Similarity=0.322  Sum_probs=50.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEE--eCCCchH----HHHHHHHhCCCcccE
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDF----VARVKEETGGKGVDV  211 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~----~~~~~~~~~~~~~d~  211 (325)
                      ..++++||+|+++.+|.++++.+...|++|++++++++...     +....+  |-.+...    .+.+.+..+  ++|+
T Consensus        12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~iD~   84 (269)
T 3vtz_A           12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-----NVSDHFKIDVTNEEEVKEAVEKTTKKYG--RIDI   84 (269)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-----TSSEEEECCTTCHHHHHHHHHHHHHHHS--CCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-----CceeEEEecCCCHHHHHHHHHHHHHHcC--CCCE
Confidence            46899999999999999999999999999999998765431     111222  3333222    233333344  6899


Q ss_pred             EEeCCCh
Q 020487          212 ILDCMGA  218 (325)
Q Consensus       212 vi~~~g~  218 (325)
                      +++++|.
T Consensus        85 lv~nAg~   91 (269)
T 3vtz_A           85 LVNNAGI   91 (269)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999873

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=96.96  E-value=0.0013  Score=54.57  Aligned_cols=93  Identities=16%  Similarity=0.278  Sum_probs=58.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCC--CcccEEEeCCCh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG--KGVDVILDCMGA  218 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~d~vi~~~g~  218 (325)
                      .+++|+|++|.+|.++++.+...|++|+++++++++.+.      .  +. .+..-.+.+.+....  .++|++|+++|.
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------~--~~-~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~   72 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------D--LS-TAEGRKQAIADVLAKCSKGMDGLVLCAGL   72 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------C--TT-SHHHHHHHHHHHHTTCTTCCSEEEECCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------c--cc-cCCCCHHHHHHHHHHhCCCCCEEEECCCC
Confidence            368999999999999999999999999999987654221      1  10 011112233333321  368999999874


Q ss_pred             HH-------------------HHHhhccccC--CCEEEEEeccCC
Q 020487          219 SY-------------------FQRNLGSLNI--DGRLFIIGTQGG  242 (325)
Q Consensus       219 ~~-------------------~~~~~~~l~~--~g~~v~~g~~~~  242 (325)
                      ..                   +..++..|..  .|++|.+++...
T Consensus        73 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  117 (257)
T 1fjh_A           73 GPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS  117 (257)
T ss_dssp             CTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             CCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh
Confidence            21                   2233444433  389999876543

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.95  E-value=0.0056  Score=51.20  Aligned_cols=100  Identities=22%  Similarity=0.346  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cChhhHHHH----HHcCCCEE-E--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADVC-I--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~-~~~~~~~~~----~~~g~~~~-~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++. ++.+..+.+    +..+.... +  |-.+...    .+.+.+..+ 
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g-  104 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG-  104 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence            478999999999999999999988899999874 444443332    33444322 2  3333222    233333444 


Q ss_pred             CcccEEEeCCChH-----------H---------------HHHhhccccCCCEEEEEecc
Q 020487          207 KGVDVILDCMGAS-----------Y---------------FQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       207 ~~~d~vi~~~g~~-----------~---------------~~~~~~~l~~~g~~v~~g~~  240 (325)
                       ++|++++++|..           .               +..++..++++|++|.+++.
T Consensus       105 -~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~  163 (267)
T 3u5t_A          105 -GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTS  163 (267)
T ss_dssp             -CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCT
T ss_pred             -CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeCh
Confidence             699999998731           0               12344556678999988654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.94  E-value=0.002  Score=54.19  Aligned_cols=78  Identities=21%  Similarity=0.387  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc---C---CC-EEE--eCCCchH----HHHHHHHh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL---G---AD-VCI--NYKTEDF----VARVKEET  204 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g---~~-~~~--~~~~~~~----~~~~~~~~  204 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++.+.+. ++   .   .. ..+  |-.+...    .+.+.+..
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999987765443 22   2   11 222  3333222    22233334


Q ss_pred             CCCcccEEEeCCCh
Q 020487          205 GGKGVDVILDCMGA  218 (325)
Q Consensus       205 ~~~~~d~vi~~~g~  218 (325)
                      +  ++|+++++.|.
T Consensus        85 g--~id~lv~~Ag~   96 (278)
T 1spx_A           85 G--KLDILVNNAGA   96 (278)
T ss_dssp             S--CCCEEEECCC-
T ss_pred             C--CCCEEEECCCC
Confidence            3  68999999874

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.93  E-value=0.0008  Score=57.45  Aligned_cols=100  Identities=21%  Similarity=0.185  Sum_probs=71.1

Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHH
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEE  203 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~  203 (325)
                      +.....++++++||-+|+ | .|..+..+++..|++|+.++.+++..+.+++    .+..   .++..+...+       
T Consensus        64 ~~~~~~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-------  134 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGC-G-WGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-------  134 (302)
T ss_dssp             HHHTTCCCTTCEEEEETC-T-TSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-------
T ss_pred             HHHHcCCCCcCEEEEeec-c-CcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-------
Confidence            446667899999999997 4 4888999999888999999999988777653    3322   2222222211       


Q ss_pred             hCCCcccEEEeCCC----------------hHHHHHhhccccCCCEEEEEeccC
Q 020487          204 TGGKGVDVILDCMG----------------ASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       204 ~~~~~~d~vi~~~g----------------~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                        ...||+|+....                ...+..+.+.|+|||+++......
T Consensus       135 --~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~  186 (302)
T 3hem_A          135 --DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI  186 (302)
T ss_dssp             --CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred             --CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence              357999987432                133577788999999999875543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.93  E-value=0.0064  Score=54.21  Aligned_cols=96  Identities=11%  Similarity=0.214  Sum_probs=72.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      +..|+|+|. |.+|..+++.++..|..|++++.++++.+.+++.|...++ .+..+ . .+.+..+-..+|+++-|++.+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~-GDat~-~-~~L~~agi~~A~~viv~~~~~   79 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFY-GDATR-M-DLLESAGAAKAEVLINAIDDP   79 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEE-SCTTC-H-HHHHHTTTTTCSEEEECCSSH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEE-cCCCC-H-HHHHhcCCCccCEEEECCCCh
Confidence            456999998 9999999999999999999999999999999988876443 33322 1 234445556899999999875


Q ss_pred             H----HHHhhccccCCCEEEEEec
Q 020487          220 Y----FQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       220 ~----~~~~~~~l~~~g~~v~~g~  239 (325)
                      .    +....+.+.++-+++....
T Consensus        80 ~~n~~i~~~ar~~~p~~~Iiara~  103 (413)
T 3l9w_A           80 QTNLQLTEMVKEHFPHLQIIARAR  103 (413)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEEES
T ss_pred             HHHHHHHHHHHHhCCCCeEEEEEC
Confidence            4    2344566777778876643

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.92  E-value=0.0061  Score=52.26  Aligned_cols=99  Identities=24%  Similarity=0.331  Sum_probs=69.8

Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHc----CCC---EEEeCCCchHHHHHHHH
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GAD---VCINYKTEDFVARVKEE  203 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~  203 (325)
                      +.....+.++.+||-+|+ |. |..+..+++..|++|+.++.+++..+.+++.    +..   .+...+....       
T Consensus        82 ~~~~~~~~~~~~vLDiGc-G~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-------  152 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGC-GW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF-------  152 (318)
T ss_dssp             HHTTSCCCTTCEEEEESC-TT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC-------
T ss_pred             HHHhcCCCCcCEEEEEcc-cc-hHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC-------
Confidence            446667889999999997 44 8888888888799999999999988777642    321   2222222111       


Q ss_pred             hCCCcccEEEeC-----CCh----HHHHHhhccccCCCEEEEEecc
Q 020487          204 TGGKGVDVILDC-----MGA----SYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       204 ~~~~~~d~vi~~-----~g~----~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                       . ..||+|+..     .+.    ..+..+.+.|+|||+++.....
T Consensus       153 -~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  196 (318)
T 2fk8_A          153 -A-EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV  196 (318)
T ss_dssp             -C-CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred             -C-CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence             1 479999876     432    2356778899999999976543

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=96.92  E-value=0.0049  Score=51.20  Aligned_cols=79  Identities=23%  Similarity=0.264  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH---CCCEEEEEecChhhHHHHH-Hc-----CCC-EEE--eCCCchHHHHHHHHh--
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKC---QGVRVFVTAGSEEKLAVCK-DL-----GAD-VCI--NYKTEDFVARVKEET--  204 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~---~g~~v~~~~~~~~~~~~~~-~~-----g~~-~~~--~~~~~~~~~~~~~~~--  204 (325)
                      .+.+++|+|+++.+|.++++.+..   .|++|+++++++++.+.+. ++     +.. ..+  |-.+......+.+..  
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            367899999999999999988887   8999999999987765443 22     322 222  333333223333222  


Q ss_pred             --CCCccc--EEEeCCC
Q 020487          205 --GGKGVD--VILDCMG  217 (325)
Q Consensus       205 --~~~~~d--~vi~~~g  217 (325)
                        ....+|  +++++.|
T Consensus        85 ~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             SCCCTTCCEEEEEECCC
T ss_pred             ccccccCCccEEEECCc
Confidence              223577  9999876

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.92  E-value=0.0033  Score=51.70  Aligned_cols=74  Identities=16%  Similarity=0.062  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      .+.+++|+|++|.+|..+++.+...  |++|++++++..+.+.+ ..+.. .+..+-.+ .+.+.+...  ++|++|.++
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~-~~~~D~~d-~~~~~~~~~--~~d~vi~~a   77 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEAD-VFIGDITD-ADSINPAFQ--GIDALVILT   77 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTT-EEECCTTS-HHHHHHHHT--TCSEEEECC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCee-EEEecCCC-HHHHHHHHc--CCCEEEEec
Confidence            4678999999999999999999888  89999999987665433 11222 22222222 234445443  589999988


Q ss_pred             C
Q 020487          217 G  217 (325)
Q Consensus       217 g  217 (325)
                      |
T Consensus        78 ~   78 (253)
T 1xq6_A           78 S   78 (253)
T ss_dssp             C
T ss_pred             c
Confidence            7

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.92  E-value=0.0039  Score=52.30  Aligned_cols=77  Identities=16%  Similarity=0.336  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCC--C-EEE--eCCCchHH----HHHHHHhCCCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--D-VCI--NYKTEDFV----ARVKEETGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~--~-~~~--~~~~~~~~----~~~~~~~~~~~  208 (325)
                      .+.+++|+|++|.+|..+++.+...|++|+++.++.++.+.+. +++.  . ..+  |-.+....    +.+.+..+  +
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~   92 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG--K   92 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS--C
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcC--C
Confidence            4688999999999999999999999999999999877654433 3332  1 222  33332222    22223333  6


Q ss_pred             ccEEEeCCC
Q 020487          209 VDVILDCMG  217 (325)
Q Consensus       209 ~d~vi~~~g  217 (325)
                      +|++|++.|
T Consensus        93 id~li~~Ag  101 (278)
T 2bgk_A           93 LDIMFGNVG  101 (278)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            899999887

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=96.91  E-value=0.0068  Score=52.13  Aligned_cols=77  Identities=22%  Similarity=0.337  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec---------ChhhHHH----HHHcCCCEEEeCCCch----HHHHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG---------SEEKLAV----CKDLGADVCINYKTED----FVARVK  201 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~---------~~~~~~~----~~~~g~~~~~~~~~~~----~~~~~~  201 (325)
                      .+.+++|+|+++.+|..+++.+...|++|++.++         +.++.+.    ++..+.....|.....    +.+.+.
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            4789999999999999999999999999999743         4444332    2334444445555433    223333


Q ss_pred             HHhCCCcccEEEeCCC
Q 020487          202 EETGGKGVDVILDCMG  217 (325)
Q Consensus       202 ~~~~~~~~d~vi~~~g  217 (325)
                      +..+  ++|++|++.|
T Consensus        88 ~~~g--~iD~lVnnAG  101 (319)
T 1gz6_A           88 DTFG--RIDVVVNNAG  101 (319)
T ss_dssp             HHTS--CCCEEEECCC
T ss_pred             HHcC--CCCEEEECCC
Confidence            3443  6899999987

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=96.91  E-value=0.0056  Score=51.05  Aligned_cols=79  Identities=16%  Similarity=0.217  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCh---hhHHHHH-HcCCCEEE--eCCCchHHHHHHH-HhC-CCc
Q 020487          139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSE---EKLAVCK-DLGADVCI--NYKTEDFVARVKE-ETG-GKG  208 (325)
Q Consensus       139 ~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~---~~~~~~~-~~g~~~~~--~~~~~~~~~~~~~-~~~-~~~  208 (325)
                      .+.+++|+|++  |.+|.++++.+...|++|++++++.   +..+.+. ..+....+  |-.+......+.+ ... ..+
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46789999998  8999999999999999999999886   2233332 23333333  3333332222222 211 126


Q ss_pred             ccEEEeCCC
Q 020487          209 VDVILDCMG  217 (325)
Q Consensus       209 ~d~vi~~~g  217 (325)
                      +|++++++|
T Consensus        88 iD~lv~~Ag   96 (265)
T 1qsg_A           88 FDGFVHSIG   96 (265)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999987

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=96.91  E-value=0.007  Score=49.84  Aligned_cols=78  Identities=32%  Similarity=0.393  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhHHHH----HHcCCCE-EE--eCCCch----HHHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADV-CI--NYKTED----FVARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~~~~----~~~g~~~-~~--~~~~~~----~~~~~~~~~~~  206 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++.+ +.++.+.+    +..+... .+  |-.+..    ..+.+.+..+ 
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g-   81 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG-   81 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC-
Confidence            3678999999999999999999999999999876 43443332    3344432 22  322322    2233333444 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       ++|+++++.|.
T Consensus        82 -~id~lv~nAg~   92 (246)
T 3osu_A           82 -SLDVLVNNAGI   92 (246)
T ss_dssp             -CCCEEEECCCC
T ss_pred             -CCCEEEECCCC
Confidence             68999999873

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=96.91  E-value=0.0029  Score=52.93  Aligned_cols=77  Identities=27%  Similarity=0.361  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhHHHH----HHcCCCE-EE--eCCCchHH----HHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADV-CI--NYKTEDFV----ARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~~~~----~~~g~~~-~~--~~~~~~~~----~~~~~~~~~  206 (325)
                      .+.+++|+|++|.+|..+++.+...|++|+++++ +.++.+.+    +..+... .+  |-.+....    +.+.+..+ 
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   98 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG-   98 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC-
Confidence            4689999999999999999999999999999998 66554432    2335432 22  32332222    22222333 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|++|++.|
T Consensus        99 -~~d~vi~~Ag  108 (274)
T 1ja9_A           99 -GLDFVMSNSG  108 (274)
T ss_dssp             -CEEEEECCCC
T ss_pred             -CCCEEEECCC
Confidence             6899999987

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=96.91  E-value=0.0075  Score=50.74  Aligned_cols=77  Identities=12%  Similarity=0.182  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCh--hhHHHHHH-cCCCEEE--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVCKD-LGADVCI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~--~~~~~~~~-~g~~~~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .+.+++|+|++  +++|.++++.+...|++|++++++.  +..+.+.+ .+....+  |-.+...    .+.+.+..+  
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g--  102 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD--  102 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS--
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC--
Confidence            47899999988  5599999999999999999999887  44444443 3333333  3333222    222333333  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      .+|++|+++|
T Consensus       103 ~id~li~nAg  112 (280)
T 3nrc_A          103 GLDAIVHSIA  112 (280)
T ss_dssp             SCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            6899999987

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=96.90  E-value=0.0067  Score=51.18  Aligned_cols=77  Identities=16%  Similarity=0.295  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecChh---hHHHHH-HcCCCEEE--eCCCchHH----HHHHHHhCC
Q 020487          139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVCK-DLGADVCI--NYKTEDFV----ARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~~---~~~~~~-~~g~~~~~--~~~~~~~~----~~~~~~~~~  206 (325)
                      .+.+++|+|++  |.+|.++++.+...|++|++++++.+   ..+.+. ..+....+  |-.+....    +.+.+..+ 
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g-   98 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG-   98 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS-
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence            47889999998  89999999999999999999998875   223332 23322233  33332222    22223333 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|++|++.|
T Consensus        99 -~iD~lv~~Ag  108 (285)
T 2p91_A           99 -SLDIIVHSIA  108 (285)
T ss_dssp             -CCCEEEECCC
T ss_pred             -CCCEEEECCC
Confidence             6899999987

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.88  E-value=0.01  Score=47.17  Aligned_cols=99  Identities=11%  Similarity=0.080  Sum_probs=69.1

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHH----cCCC--EEEeCCCchHHHHHHHHhC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVARVKEETG  205 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~~  205 (325)
                      ....++++++||-+|+ | .|..+..+++.. +.+|++++.+++..+.+++    .+.+  .++..+.....      ..
T Consensus        34 ~~l~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------~~  105 (204)
T 3e05_A           34 SKLRLQDDLVMWDIGA-G-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGL------DD  105 (204)
T ss_dssp             HHTTCCTTCEEEEETC-T-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTC------TT
T ss_pred             HHcCCCCCCEEEEECC-C-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhh------hc
Confidence            5567889999999997 4 488888888886 3699999999998777653    3432  23332221110      11


Q ss_pred             CCcccEEEeCCCh----HHHHHhhccccCCCEEEEEec
Q 020487          206 GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       206 ~~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ...+|+|+.....    ..+..+.+.|+++|+++....
T Consensus       106 ~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (204)
T 3e05_A          106 LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV  143 (204)
T ss_dssp             SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence            1369999987652    346788889999999998753

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=96.88  E-value=0.0029  Score=52.08  Aligned_cols=78  Identities=21%  Similarity=0.348  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecChhhHHHH----HHcCCCE-EE--eCCCchHH----HHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVC----KDLGADV-CI--NYKTEDFV----ARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~-~~~~~~~~~~----~~~g~~~-~~--~~~~~~~~----~~~~~~~~~  206 (325)
                      .+.+++|+|++|.+|..+++.+...|++|+++ .+++++.+..    +..+... .+  |-.+....    +.+.+..+ 
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   82 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG-   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS-
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC-
Confidence            36789999999999999999999999999998 5555444332    2334332 22  32232222    22223333 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       ++|++|++.|.
T Consensus        83 -~~d~vi~~Ag~   93 (247)
T 2hq1_A           83 -RIDILVNNAGI   93 (247)
T ss_dssp             -CCCEEEECC--
T ss_pred             -CCCEEEECCCC
Confidence             68999999874

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=96.87  E-value=0.0014  Score=53.99  Aligned_cols=97  Identities=16%  Similarity=0.182  Sum_probs=62.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEecChh-hHHHHHHcCCCEEE--eCCCchHHHHHHHHhCCCcccEEEe
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEE-KLAVCKDLGADVCI--NYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~-~g~~v~~~~~~~~-~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      .+.++||+|+++.+|.++++.+.. .|++|++..++++ ..+.      -..+  |-.+......+.+.....++|++++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~------~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~   76 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAEN------LKFIKADLTKQQDITNVLDIIKNVSFDGIFL   76 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTT------EEEEECCTTCHHHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccccc------ceEEecCcCCHHHHHHHHHHHHhCCCCEEEE
Confidence            467899999999999999987776 6889999887654 2111      1222  3333333334444444447999999


Q ss_pred             CCChH-----------H---------------HHHhhccccCCCEEEEEeccC
Q 020487          215 CMGAS-----------Y---------------FQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       215 ~~g~~-----------~---------------~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      +.|..           .               +..++..+.++|++|.+++..
T Consensus        77 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~  129 (244)
T 4e4y_A           77 NAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQ  129 (244)
T ss_dssp             CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGG
T ss_pred             CCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHH
Confidence            98741           0               123345566678999886654

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.87  E-value=0.0054  Score=51.21  Aligned_cols=77  Identities=18%  Similarity=0.202  Sum_probs=58.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+++|+|.++.+|..+++++...|++|++..+..                   .+    +.+.+  +.+|++|.++|.
T Consensus       160 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------------~~----L~~~~--~~ADIVI~Avg~  214 (285)
T 3l07_A          160 EGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT-------------------TD----LKSHT--TKADILIVAVGK  214 (285)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------------SS----HHHHH--TTCSEEEECCCC
T ss_pred             CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-------------------hh----HHHhc--ccCCEEEECCCC
Confidence            689999999977799999999999999998775321                   11    22223  268999999997


Q ss_pred             HHHHHhhccccCCCEEEEEeccC
Q 020487          219 SYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       219 ~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      +.+ --.++++++..++++|...
T Consensus       215 p~~-I~~~~vk~GavVIDvgi~~  236 (285)
T 3l07_A          215 PNF-ITADMVKEGAVVIDVGINH  236 (285)
T ss_dssp             TTC-BCGGGSCTTCEEEECCCEE
T ss_pred             CCC-CCHHHcCCCcEEEEecccC
Confidence            654 2246789999999987653

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=96.87  E-value=0.0022  Score=54.00  Aligned_cols=77  Identities=22%  Similarity=0.258  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHH----HHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFV----ARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~----~~~~~~~~~~  207 (325)
                      .+.+++|+|++|.+|..++..+...|++|++++++.++.+.+.    ..+... .+  |-.+....    +.+.+..+  
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g--  110 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFG--  110 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhC--
Confidence            3789999999999999999988888999999998876544332    234332 22  32332222    22222333  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      .+|++|+++|
T Consensus       111 ~id~li~~Ag  120 (279)
T 3ctm_A          111 TIDVFVANAG  120 (279)
T ss_dssp             CCSEEEECGG
T ss_pred             CCCEEEECCc
Confidence            5899999876

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.86  E-value=0.0028  Score=53.66  Aligned_cols=77  Identities=14%  Similarity=0.144  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh-hhHHHHH-----HcCCCE-EE--eCCC----chHH----HHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAVCK-----DLGADV-CI--NYKT----EDFV----ARVK  201 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~-~~~~~~~-----~~g~~~-~~--~~~~----~~~~----~~~~  201 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++++++. ++.+.+.     ..+... .+  |-.+    ....    +.+.
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            468899999999999999999999999999999887 5543332     234322 22  3233    2212    2222


Q ss_pred             HHhCCCcccEEEeCCC
Q 020487          202 EETGGKGVDVILDCMG  217 (325)
Q Consensus       202 ~~~~~~~~d~vi~~~g  217 (325)
                      +..+  ++|++|+++|
T Consensus       102 ~~~g--~iD~lvnnAG  115 (288)
T 2x9g_A          102 RAFG--RCDVLVNNAS  115 (288)
T ss_dssp             HHHS--CCCEEEECCC
T ss_pred             HhcC--CCCEEEECCC
Confidence            3333  6899999987

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.86  E-value=0.0012  Score=53.94  Aligned_cols=97  Identities=14%  Similarity=0.132  Sum_probs=66.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHHhCCC
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      ...++.+||-+|+ | .|..+..+++.. +.+|+.++.+++..+.+++    .|..   .++..+....   +.......
T Consensus        51 ~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~~~  125 (233)
T 2gpy_A           51 KMAAPARILEIGT-A-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQL---GEKLELYP  125 (233)
T ss_dssp             HHHCCSEEEEECC-T-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGS---HHHHTTSC
T ss_pred             hccCCCEEEEecC-C-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH---HHhcccCC
Confidence            3457889999997 4 688888999887 6799999999988776654    3432   2222222221   12222234


Q ss_pred             cccEEEeCCCh----HHHHHhhccccCCCEEEEE
Q 020487          208 GVDVILDCMGA----SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       208 ~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~  237 (325)
                      .||+|+.....    ..+..+.+.|++||+++..
T Consensus       126 ~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  159 (233)
T 2gpy_A          126 LFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD  159 (233)
T ss_dssp             CEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            79999876653    3467788999999999875

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.85  E-value=0.023  Score=41.89  Aligned_cols=93  Identities=13%  Similarity=0.142  Sum_probs=60.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      +.+++|+|+ |.+|..+++.+...|.+|+++++++++.+.+++ .+.. .+..+... ...+.+ .+-.++|+++.|++.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~-~~~~d~~~-~~~l~~-~~~~~~d~vi~~~~~   79 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDCTK-IKTLED-AGIEDADMYIAVTGK   79 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCTTS-HHHHHH-TTTTTCSEEEECCSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcE-EEEcCCCC-HHHHHH-cCcccCCEEEEeeCC
Confidence            457999998 999999999999999999999998888776653 4543 33222222 122222 223468999999987


Q ss_pred             HHH----HHhhccccCCCEEEEE
Q 020487          219 SYF----QRNLGSLNIDGRLFII  237 (325)
Q Consensus       219 ~~~----~~~~~~l~~~g~~v~~  237 (325)
                      ...    ....+.+.+ ++++..
T Consensus        80 ~~~~~~~~~~~~~~~~-~~ii~~  101 (140)
T 1lss_A           80 EEVNLMSSLLAKSYGI-NKTIAR  101 (140)
T ss_dssp             HHHHHHHHHHHHHTTC-CCEEEE
T ss_pred             chHHHHHHHHHHHcCC-CEEEEE
Confidence            542    233344554 355543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.84  E-value=0.0026  Score=52.85  Aligned_cols=77  Identities=23%  Similarity=0.326  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCE-EE--eCCCchHHHHHHHHh-CCCcccEEEe
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CI--NYKTEDFVARVKEET-GGKGVDVILD  214 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~--~~~~~~~~~~~~~~~-~~~~~d~vi~  214 (325)
                      .+.++||+|+++.+|.++++.+...|++|+++++..++.  .++++... .+  |-.+......+.+.. ...++|++++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~   85 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV--VADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVN   85 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH--HHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH--HHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence            367899999999999999999999999999999855433  33444432 22  333322222222111 1126999999


Q ss_pred             CCC
Q 020487          215 CMG  217 (325)
Q Consensus       215 ~~g  217 (325)
                      ++|
T Consensus        86 nAg   88 (257)
T 3tl3_A           86 CAG   88 (257)
T ss_dssp             CGG
T ss_pred             CCC
Confidence            998

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=96.84  E-value=0.007  Score=52.61  Aligned_cols=77  Identities=16%  Similarity=0.261  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC-CC-EEEEEecChhhHHHHH-HcCC-C-EEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQ-GV-RVFVTAGSEEKLAVCK-DLGA-D-VCINYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~-g~-~v~~~~~~~~~~~~~~-~~g~-~-~~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                      .+.+|||+|++|.+|..+++.+... |+ +|+++++++.+...+. .+.. . ..+..+-.+ .+.+.+...  ++|+||
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~l~~~~~--~~D~Vi   96 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRD-LERLNYALE--GVDICI   96 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTC-HHHHHHHTT--TCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCC-HHHHHHHHh--cCCEEE
Confidence            4789999999999999999988887 98 9999999987765544 2321 1 223222222 334555554  689999


Q ss_pred             eCCCh
Q 020487          214 DCMGA  218 (325)
Q Consensus       214 ~~~g~  218 (325)
                      .+++.
T Consensus        97 h~Aa~  101 (344)
T 2gn4_A           97 HAAAL  101 (344)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99873

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.83  E-value=0.0052  Score=51.31  Aligned_cols=77  Identities=18%  Similarity=0.167  Sum_probs=58.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+++|+|.++.+|..+++++...|++|++..+...                   +    +.+.+  +.+|++|.++|.
T Consensus       159 ~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~-------------------~----L~~~~--~~ADIVI~Avg~  213 (285)
T 3p2o_A          159 EGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK-------------------D----LSLYT--RQADLIIVAAGC  213 (285)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS-------------------C----HHHHH--TTCSEEEECSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch-------------------h----HHHHh--hcCCEEEECCCC
Confidence            6899999999778999999999999999988764321                   1    12223  268999999997


Q ss_pred             HHHHHhhccccCCCEEEEEeccC
Q 020487          219 SYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       219 ~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      +.+ ---++++++..++++|...
T Consensus       214 p~~-I~~~~vk~GavVIDVgi~~  235 (285)
T 3p2o_A          214 VNL-LRSDMVKEGVIVVDVGINR  235 (285)
T ss_dssp             TTC-BCGGGSCTTEEEEECCCEE
T ss_pred             CCc-CCHHHcCCCeEEEEeccCc
Confidence            654 1246789998999998654

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=96.83  E-value=0.0091  Score=50.09  Aligned_cols=100  Identities=17%  Similarity=0.166  Sum_probs=69.4

Q ss_pred             HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHH----c-C--CCE--EEeCCCchHHHHH
Q 020487          132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----L-G--ADV--CINYKTEDFVARV  200 (325)
Q Consensus       132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~----~-g--~~~--~~~~~~~~~~~~~  200 (325)
                      .....++++++||-.|+ | .|..+..+++..  +.+|+.++.+++..+.+++    . |  ...  +...+....    
T Consensus        92 ~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~----  165 (280)
T 1i9g_A           92 VHEGDIFPGARVLEAGA-G-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS----  165 (280)
T ss_dssp             HHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC----
T ss_pred             HHHcCCCCCCEEEEEcc-c-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc----
Confidence            35567899999999997 4 688888888875  5699999999988776653    2 4  222  222221111    


Q ss_pred             HHHhCCCcccEEEeCCCh--HHHHHhhccccCCCEEEEEec
Q 020487          201 KEETGGKGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       201 ~~~~~~~~~d~vi~~~g~--~~~~~~~~~l~~~g~~v~~g~  239 (325)
                        ......+|+|+.....  ..+..+.+.|+++|+++....
T Consensus       166 --~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  204 (280)
T 1i9g_A          166 --ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  204 (280)
T ss_dssp             --CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             --CCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence              1123469999986654  346788899999999998754

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=96.83  E-value=0.0068  Score=49.68  Aligned_cols=76  Identities=22%  Similarity=0.312  Sum_probs=51.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecChhhHHHHH----HcCCC-EE-E--eCCCchHH----HHHHHHhCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVCK----DLGAD-VC-I--NYKTEDFV----ARVKEETGG  206 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~-~~~~~~~~~~~----~~g~~-~~-~--~~~~~~~~----~~~~~~~~~  206 (325)
                      +.+++|+|++|.+|..+++.+...|++|+++ .++.++.+.+.    ..+.. .. +  |-.+....    +.+.+..+ 
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG-   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT-
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC-
Confidence            3579999999999999999999999999998 77776654432    23433 22 3  33332222    22222333 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|++|.++|
T Consensus        80 -~~d~li~~Ag   89 (245)
T 2ph3_A           80 -GLDTLVNNAG   89 (245)
T ss_dssp             -CCCEEEECCC
T ss_pred             -CCCEEEECCC
Confidence             6899999987

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=96.83  E-value=0.0046  Score=51.25  Aligned_cols=77  Identities=25%  Similarity=0.346  Sum_probs=52.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHH-HcCCCE-EE--eCCCchH----HHHHHHHhCCCcc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTEDF----VARVKEETGGKGV  209 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~~----~~~~~~~~~~~~~  209 (325)
                      +++++|+|+++.+|.++++.+...  |++|+.+.+++++.+.+. +++... .+  |-.+...    .+.+.+..+  ++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHG--KI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHS--CC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcC--Cc
Confidence            578999999999999998877665  579999999988776654 344322 22  3333222    233333344  68


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |+++++.|.
T Consensus        80 d~lvnnAg~   88 (254)
T 3kzv_A           80 DSLVANAGV   88 (254)
T ss_dssp             CEEEEECCC
T ss_pred             cEEEECCcc
Confidence            999998873

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=96.83  E-value=0.0027  Score=53.77  Aligned_cols=79  Identities=22%  Similarity=0.305  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEecChhhHHHHHH-c-----CCCE-EE--eCCCchHHHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV---RVFVTAGSEEKLAVCKD-L-----GADV-CI--NYKTEDFVARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~---~v~~~~~~~~~~~~~~~-~-----g~~~-~~--~~~~~~~~~~~~~~~~~  206 (325)
                      .+.++||+|+++.+|.++++.+...|+   +|+++.++.++.+.+.+ +     +... .+  |-.+....+.+.+....
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            378999999999999999988777776   99999999887765432 1     3221 22  33343333333332211


Q ss_pred             --CcccEEEeCCC
Q 020487          207 --KGVDVILDCMG  217 (325)
Q Consensus       207 --~~~d~vi~~~g  217 (325)
                        .++|++++++|
T Consensus       112 ~~g~iD~lVnnAG  124 (287)
T 3rku_A          112 EFKDIDILVNNAG  124 (287)
T ss_dssp             GGCSCCEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence              26899999987

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.83  E-value=0.0059  Score=50.52  Aligned_cols=77  Identities=13%  Similarity=0.197  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChh--hHHHHHHc--CCC-EEE--eCCCc-hH----HHHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEE--KLAVCKDL--GAD-VCI--NYKTE-DF----VARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~--~~~~~~~~--g~~-~~~--~~~~~-~~----~~~~~~~~~  205 (325)
                      .+.+++|+|++|.+|..+++.+...|++ |++++++..  ..+.+.+.  +.. ..+  |-.+. ..    .+.+.+..+
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            3678999999999999999999999996 999888753  33444332  221 122  33332 21    222333333


Q ss_pred             CCcccEEEeCCC
Q 020487          206 GKGVDVILDCMG  217 (325)
Q Consensus       206 ~~~~d~vi~~~g  217 (325)
                        ++|++|+++|
T Consensus        84 --~id~lv~~Ag   93 (254)
T 1sby_A           84 --TVDILINGAG   93 (254)
T ss_dssp             --CCCEEEECCC
T ss_pred             --CCCEEEECCc
Confidence              6899999987

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.82  E-value=0.0026  Score=53.96  Aligned_cols=42  Identities=17%  Similarity=0.122  Sum_probs=36.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cChhhHHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC  180 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~-~~~~~~~~~  180 (325)
                      .+.+++|+|+++.+|.++++.+...|++|++++ ++.++.+.+
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~   50 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANAL   50 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHH
Confidence            468899999999999999999999999999999 888765543

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=96.82  E-value=0.008  Score=50.29  Aligned_cols=78  Identities=28%  Similarity=0.388  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecChhhHHHHH----HcCCCE-EE--eCCCchH----HHHHHHHhC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVCK----DLGADV-CI--NYKTEDF----VARVKEETG  205 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~-~~~~~~~~~~~----~~g~~~-~~--~~~~~~~----~~~~~~~~~  205 (325)
                      ..+.+++|+|+++.+|.++++.+...|++|+++ .++.++.+.+.    +.+... .+  |-.+...    .+.+.+..+
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999999887 66666554432    334322 22  3333222    233333344


Q ss_pred             CCcccEEEeCCC
Q 020487          206 GKGVDVILDCMG  217 (325)
Q Consensus       206 ~~~~d~vi~~~g  217 (325)
                        ++|++|+++|
T Consensus       104 --~id~li~nAg  113 (272)
T 4e3z_A          104 --RLDGLVNNAG  113 (272)
T ss_dssp             --CCCEEEECCC
T ss_pred             --CCCEEEECCC
Confidence              6899999987

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.82  E-value=0.0028  Score=54.87  Aligned_cols=79  Identities=13%  Similarity=0.128  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHH----HHHH-cCC-CEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA----VCKD-LGA-DVCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~----~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      .+.+|||+|++|.+|..+++.+...|++|++++++..+..    .+.. .+. ...+..+-.+ .+.+.+.....++|+|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~v   82 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSD-ERALARIFDAHPITAA   82 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTC-HHHHHHHHHHSCCCEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCC-HHHHHHHHhccCCcEE
Confidence            4578999999999999999999999999999997655332    2221 122 2233222211 2233333322369999


Q ss_pred             EeCCCh
Q 020487          213 LDCMGA  218 (325)
Q Consensus       213 i~~~g~  218 (325)
                      |.+++.
T Consensus        83 ih~A~~   88 (341)
T 3enk_A           83 IHFAAL   88 (341)
T ss_dssp             EECCCC
T ss_pred             EECccc
Confidence            999873

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=96.81  E-value=0.005  Score=51.67  Aligned_cols=77  Identities=16%  Similarity=0.261  Sum_probs=52.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCC--C-EEE--eCCCchHHHHHHHHhC--CCcccEE
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--D-VCI--NYKTEDFVARVKEETG--GKGVDVI  212 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~--~-~~~--~~~~~~~~~~~~~~~~--~~~~d~v  212 (325)
                      .+++|+|++|.+|.++++.+...|++|++++++.++.+.+. ++..  . ..+  |-.+......+.+...  ..++|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            68999999999999999999999999999999988766543 3321  1 222  3333322223322211  1258999


Q ss_pred             EeCCC
Q 020487          213 LDCMG  217 (325)
Q Consensus       213 i~~~g  217 (325)
                      +++.|
T Consensus       102 vnnAG  106 (272)
T 2nwq_A          102 INNAG  106 (272)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99986

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.81  E-value=0.0073  Score=50.43  Aligned_cols=77  Identities=17%  Similarity=0.126  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+++|.|.++.+|..+++++...|++|++..+..                   .+..    +.+  +.+|++|.++|.
T Consensus       160 ~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T-------------------~~L~----~~~--~~ADIVI~Avg~  214 (286)
T 4a5o_A          160 YGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT-------------------RDLA----DHV--SRADLVVVAAGK  214 (286)
T ss_dssp             TTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC-------------------SCHH----HHH--HTCSEEEECCCC
T ss_pred             CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC-------------------cCHH----HHh--ccCCEEEECCCC
Confidence            689999999978899999999999999999876322                   1122    222  158999999997


Q ss_pred             HHHHHhhccccCCCEEEEEeccC
Q 020487          219 SYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       219 ~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      +.+ ---++++++..++.+|...
T Consensus       215 p~~-I~~~~vk~GavVIDvgi~~  236 (286)
T 4a5o_A          215 PGL-VKGEWIKEGAIVIDVGINR  236 (286)
T ss_dssp             TTC-BCGGGSCTTCEEEECCSCS
T ss_pred             CCC-CCHHHcCCCeEEEEecccc
Confidence            653 1236789999999998654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=96.80  E-value=0.013  Score=49.45  Aligned_cols=75  Identities=13%  Similarity=0.218  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc----CCC-EEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----GAD-VCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~----g~~-~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      ++.+++|+|++|++|.+++..+...|++|+++.++.++.+.+. ++    +.. ...|..+.   +.+.+...  .+|++
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~~Dvl  192 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD---ASRAEAVK--GAHFV  192 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH---HHHHHHTT--TCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCH---HHHHHHHH--hCCEE
Confidence            5789999998899999999999999999999999877665432 22    222 22333332   23344433  48999


Q ss_pred             EeCCCh
Q 020487          213 LDCMGA  218 (325)
Q Consensus       213 i~~~g~  218 (325)
                      ++|+|.
T Consensus       193 Vn~ag~  198 (287)
T 1lu9_A          193 FTAGAI  198 (287)
T ss_dssp             EECCCT
T ss_pred             EECCCc
Confidence            999973

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.80  E-value=0.0056  Score=48.63  Aligned_cols=63  Identities=21%  Similarity=0.331  Sum_probs=45.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +++|+|++|.+|..+++.+. .|++|++++++.+          ....|-.+....+.+.+..  .++|++|.+.|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------~~~~D~~~~~~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------DVTVDITNIDSIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------SEECCTTCHHHHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------ceeeecCCHHHHHHHHHHh--CCCCEEEECCC
Confidence            79999999999999999998 8999999998754          1223333333333333333  26899999987

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.80  E-value=0.00035  Score=58.10  Aligned_cols=71  Identities=27%  Similarity=0.337  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEE--eCCCchHH----HHHHHHhCCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDFV----ARVKEETGGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~----~~~~~~~~~~~~d~v  212 (325)
                      .+.+++|+|++|.+|.++++.+...|++|+++.++.++.+.      -..+  |-.+....    +.+.+..+  .+|++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~~~g--~iD~l   91 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEETHG--PVEVL   91 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHHHTC--SCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHHHcC--CCCEE
Confidence            36789999999999999999999999999999987654321      1222  33332222    22223333  68999


Q ss_pred             EeCCC
Q 020487          213 LDCMG  217 (325)
Q Consensus       213 i~~~g  217 (325)
                      +++.|
T Consensus        92 v~nAg   96 (253)
T 2nm0_A           92 IANAG   96 (253)
T ss_dssp             EEECS
T ss_pred             EECCC
Confidence            99887

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=96.80  E-value=0.004  Score=51.11  Aligned_cols=76  Identities=18%  Similarity=0.233  Sum_probs=51.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-------EEEEEecChhhHHHHH-H---cCCC-EEE--eCCCchHH----HHHH
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGV-------RVFVTAGSEEKLAVCK-D---LGAD-VCI--NYKTEDFV----ARVK  201 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~-------~v~~~~~~~~~~~~~~-~---~g~~-~~~--~~~~~~~~----~~~~  201 (325)
                      +.+++|+|++|.+|..+++.+...|+       +|+++.++.++.+.+. +   .+.. ..+  |-.+....    +.+.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            56799999999999999998888899       9999999887765443 2   2322 222  32332222    2222


Q ss_pred             HHhCCCcccEEEeCCC
Q 020487          202 EETGGKGVDVILDCMG  217 (325)
Q Consensus       202 ~~~~~~~~d~vi~~~g  217 (325)
                      +..+  ++|++|+++|
T Consensus        82 ~~~g--~id~li~~Ag   95 (244)
T 2bd0_A           82 ERYG--HIDCLVNNAG   95 (244)
T ss_dssp             HHTS--CCSEEEECCC
T ss_pred             HhCC--CCCEEEEcCC
Confidence            2333  6899999987

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=96.79  E-value=0.0045  Score=51.43  Aligned_cols=78  Identities=21%  Similarity=0.377  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHH-HHH----HcCCCE-EE--eCCCchHHH----HHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-VCK----DLGADV-CI--NYKTEDFVA----RVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~-~~~----~~g~~~-~~--~~~~~~~~~----~~~~~~~~  206 (325)
                      .+.+++|+|++|.+|..+++.+...|++|++++++.++.. ..+    ..+... .+  |-.+.....    .+.+..+ 
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-   91 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG-   91 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC-
Confidence            3678999999999999999999999999999998654432 222    224332 22  333322222    2222232 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       .+|+++.++|.
T Consensus        92 -~id~li~~Ag~  102 (265)
T 1h5q_A           92 -PISGLIANAGV  102 (265)
T ss_dssp             -SEEEEEECCCC
T ss_pred             -CCCEEEECCCc
Confidence             69999999873

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=96.79  E-value=0.0052  Score=54.52  Aligned_cols=84  Identities=20%  Similarity=0.201  Sum_probs=55.7

Q ss_pred             hcCC-CCCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEecChhhH----------------HHHHHcCCCE-EEeCC--
Q 020487          134 TSHL-SPGESFLVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKL----------------AVCKDLGADV-CINYK--  192 (325)
Q Consensus       134 ~~~~-~~~~~vli~g~~g~~G~~~~~~a~~-~g~~v~~~~~~~~~~----------------~~~~~~g~~~-~~~~~--  192 (325)
                      ...+ +.++++||+|+++++|++++..+.. .|++|+++.++.+..                +.+++.|... .+..+  
T Consensus        54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAF  133 (422)
T ss_dssp             TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCC
Confidence            3455 3578899999999999999988888 999999998764421                3345566543 23222  


Q ss_pred             Cch----HHHHHHHHhCCCcccEEEeCCCh
Q 020487          193 TED----FVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       193 ~~~----~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      +..    ..+.+.+..+ .++|++++++|.
T Consensus       134 d~~~v~~~v~~i~~~~~-G~IDiLVNNAG~  162 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMG-GQVDLVVYSLAS  162 (422)
T ss_dssp             SHHHHHHHHHHHHHHSC-SCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcC-CCCCEEEEcCcc
Confidence            222    2333444441 269999999875

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.79  E-value=0.0046  Score=51.20  Aligned_cols=78  Identities=29%  Similarity=0.341  Sum_probs=50.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cChhhHH----HHHHcCCC-EEEe--CCCch----HHHHHHHHhC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLA----VCKDLGAD-VCIN--YKTED----FVARVKEETG  205 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~-~~~~~~~----~~~~~g~~-~~~~--~~~~~----~~~~~~~~~~  205 (325)
                      .++.++||+|+++.+|.+++..+...|++|++++ ++.++..    ..+..+.. ..+.  -.+..    ..+.+.+..+
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            5678999999999999999999999999999987 4444332    23334433 2332  22222    2233333343


Q ss_pred             CCcccEEEeCCC
Q 020487          206 GKGVDVILDCMG  217 (325)
Q Consensus       206 ~~~~d~vi~~~g  217 (325)
                        ++|++++++|
T Consensus        91 --~id~lv~~Ag  100 (256)
T 3ezl_A           91 --EIDVLVNNAG  100 (256)
T ss_dssp             --CEEEEEECCC
T ss_pred             --CCCEEEECCC
Confidence              6999999987

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.78  E-value=0.0023  Score=53.88  Aligned_cols=96  Identities=10%  Similarity=0.105  Sum_probs=62.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      +|+|+|++|.+|..+++.+...  |++|++++++..+...+...+.. ++..+-.+ .+.+.+...  ++|+||.+.+..
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~d-~~~~~~~~~--~~d~vi~~a~~~   76 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGIT-VRQADYGD-EAALTSALQ--GVEKLLLISSSE   76 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCE-EEECCTTC-HHHHHHHTT--TCSEEEECC---
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCe-EEEcCCCC-HHHHHHHHh--CCCEEEEeCCCC
Confidence            4899999999999999999887  89999999987766555444443 33222222 234455553  689999998742


Q ss_pred             ------HHHHhhccccC-C-CEEEEEeccC
Q 020487          220 ------YFQRNLGSLNI-D-GRLFIIGTQG  241 (325)
Q Consensus       220 ------~~~~~~~~l~~-~-g~~v~~g~~~  241 (325)
                            ....+++.+.. + +++|.++...
T Consensus        77 ~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~  106 (286)
T 2zcu_A           77 VGQRAPQHRNVINAAKAAGVKFIAYTSLLH  106 (286)
T ss_dssp             -----CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred             chHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence                  23344444433 3 5888876644

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.78  E-value=0.008  Score=50.11  Aligned_cols=71  Identities=20%  Similarity=0.266  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEE--eCCCchH----HHHHHHHhCCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDF----VARVKEETGGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~----~~~~~~~~~~~~~d~v  212 (325)
                      .+.++||+|++|.+|.++++.+...|++|+++++++++     .... ..+  |-.+...    .+.+.+..+  ++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~-~~~~~Dl~~~~~v~~~~~~~~~~~g--~iD~l   78 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----EAKY-DHIECDVTNPDQVKASIDHIFKEYG--SISVL   78 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----SCSS-EEEECCTTCHHHHHHHHHHHHHHHS--CCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----CCce-EEEEecCCCHHHHHHHHHHHHHHcC--CCCEE
Confidence            36789999999999999999999999999999987654     1111 222  3333222    222333343  68999


Q ss_pred             EeCCC
Q 020487          213 LDCMG  217 (325)
Q Consensus       213 i~~~g  217 (325)
                      +++.|
T Consensus        79 v~~Ag   83 (264)
T 2dtx_A           79 VNNAG   83 (264)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=96.78  E-value=0.0037  Score=51.30  Aligned_cols=76  Identities=24%  Similarity=0.316  Sum_probs=50.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecChhhHHHHH----HcCCCE-EE--eCCCchHHH----HHHHHhCCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVCK----DLGADV-CI--NYKTEDFVA----RVKEETGGK  207 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~-~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~----~~~~~~~~~  207 (325)
                      |.+++|+|++|.+|..+++.+...|++|+++ .++.++.+.+.    ..+... .+  |-.+.....    .+.+..+  
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG--   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS--
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC--
Confidence            4689999999999999999999999999995 77776654332    234321 22  323322222    2222233  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|++|++.|
T Consensus        79 ~id~li~~Ag   88 (244)
T 1edo_A           79 TIDVVVNNAG   88 (244)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899999987

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.78  E-value=0.00054  Score=53.30  Aligned_cols=100  Identities=21%  Similarity=0.222  Sum_probs=68.8

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHH----cCCC-E-EEeCCCchHHHHHHHHhC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGAD-V-CINYKTEDFVARVKEETG  205 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~----~g~~-~-~~~~~~~~~~~~~~~~~~  205 (325)
                      ....+.++++||-+|+ | .|..+..+++.. +.+|++++.+++..+.+++    .+.. . .+..+...   .+..  .
T Consensus        19 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~---~~~~--~   91 (178)
T 3hm2_A           19 SALAPKPHETLWDIGG-G-SGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPR---AFDD--V   91 (178)
T ss_dssp             HHHCCCTTEEEEEEST-T-TTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTG---GGGG--C
T ss_pred             HHhcccCCCeEEEeCC-C-CCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHh---hhhc--c
Confidence            4556788999999997 5 388899999887 5699999999988777663    3433 2 22222211   1111  1


Q ss_pred             CCcccEEEeCCChH---HHHHhhccccCCCEEEEEec
Q 020487          206 GKGVDVILDCMGAS---YFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       206 ~~~~d~vi~~~g~~---~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ...||+|+......   .+..+.+.|+++|+++....
T Consensus        92 ~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           92 PDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             CSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             CCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence            14799999766543   46888899999999997653

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=96.78  E-value=0.011  Score=46.50  Aligned_cols=97  Identities=19%  Similarity=0.144  Sum_probs=63.6

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHCC----------CEEEEEecChhhHHHHHHcCCCEEE-eCCC--chHHHHHH
Q 020487          135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQG----------VRVFVTAGSEEKLAVCKDLGADVCI-NYKT--EDFVARVK  201 (325)
Q Consensus       135 ~~~~~~~~vli~g~~g~~G~~~~~~a~~~g----------~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~--~~~~~~~~  201 (325)
                      ..++++++||.+|+ |. |..+..+++..|          .+|++++.++...     +.....+ ..+.  ......+.
T Consensus        18 ~~~~~~~~vLDlGc-G~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~~   90 (196)
T 2nyu_A           18 QILRPGLRVLDCGA-AP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRIL   90 (196)
T ss_dssp             CCCCTTCEEEEETC-CS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHHH
T ss_pred             CCCCCCCEEEEeCC-CC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHHH
Confidence            34688999999998 65 889999999876          7899999887421     1112233 2222  22233334


Q ss_pred             HHhCCCcccEEEe-----CCCh-------------HHHHHhhccccCCCEEEEEe
Q 020487          202 EETGGKGVDVILD-----CMGA-------------SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       202 ~~~~~~~~d~vi~-----~~g~-------------~~~~~~~~~l~~~g~~v~~g  238 (325)
                      +.+.+..||+|+.     +.+.             ..+..+.+.|+|||+++...
T Consensus        91 ~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  145 (196)
T 2nyu_A           91 EVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT  145 (196)
T ss_dssp             HHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             HhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence            4454557999994     3332             23456778999999998764

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.78  E-value=0.01  Score=47.16  Aligned_cols=143  Identities=14%  Similarity=0.153  Sum_probs=84.5

Q ss_pred             CCCCCEEEEEcCCceeeeEEe-ecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHH
Q 020487           79 WKVGDQVCALLGGGGYAEKVA-VPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAI  157 (325)
Q Consensus        79 ~~~Gd~V~~~~~~g~~~~~~~-~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~  157 (325)
                      ++.|+.+....   .|.+|.. .+....+.++..+.+..+..  .........+..  .+.++.+||-+|+ |. |..+.
T Consensus         6 ~~~~~~~~~~p---~w~~~~~~~~~~~~~~~~~~~~f~~~~~--~~~~~~~~~l~~--~~~~~~~vLDiG~-G~-G~~~~   76 (205)
T 3grz_A            6 INLSRHLAIVP---EWEDYQPVFKDQEIIRLDPGLAFGTGNH--QTTQLAMLGIER--AMVKPLTVADVGT-GS-GILAI   76 (205)
T ss_dssp             EEEETTEEEEE---TTCCCCCSSTTCEEEEESCC-----CCH--HHHHHHHHHHHH--HCSSCCEEEEETC-TT-SHHHH
T ss_pred             EEECCcEEEec---cccccccCCCCceeEEecCCcccCCCCC--ccHHHHHHHHHH--hccCCCEEEEECC-CC-CHHHH
Confidence            45566665553   3666666 56677777777766554321  111111112211  2568899999997 43 77777


Q ss_pred             HHHHHCCC-EEEEEecChhhHHHHHH----cCCC--EEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH----HHHhhc
Q 020487          158 QMGKCQGV-RVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVARVKEETGGKGVDVILDCMGASY----FQRNLG  226 (325)
Q Consensus       158 ~~a~~~g~-~v~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~----~~~~~~  226 (325)
                      .+++. +. +|++++.++...+.+++    .+..  .++..+....        ..+.||+|+.......    +..+.+
T Consensus        77 ~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--------~~~~fD~i~~~~~~~~~~~~l~~~~~  147 (205)
T 3grz_A           77 AAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD--------VDGKFDLIVANILAEILLDLIPQLDS  147 (205)
T ss_dssp             HHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT--------CCSCEEEEEEESCHHHHHHHGGGSGG
T ss_pred             HHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc--------CCCCceEEEECCcHHHHHHHHHHHHH
Confidence            77664 55 99999999987776653    3432  3333332221        1247999998766543    355567


Q ss_pred             cccCCCEEEEEec
Q 020487          227 SLNIDGRLFIIGT  239 (325)
Q Consensus       227 ~l~~~g~~v~~g~  239 (325)
                      .|+++|+++..+.
T Consensus       148 ~L~~gG~l~~~~~  160 (205)
T 3grz_A          148 HLNEDGQVIFSGI  160 (205)
T ss_dssp             GEEEEEEEEEEEE
T ss_pred             hcCCCCEEEEEec
Confidence            8899999998643

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=96.77  E-value=0.0015  Score=54.62  Aligned_cols=95  Identities=8%  Similarity=0.062  Sum_probs=70.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCC-EEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .++.+||.+|+ |. |..+..+++.. |.+|++++.++...+.+++.+.. .+...+.....      .....||+|+..
T Consensus        84 ~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~------~~~~~fD~v~~~  155 (269)
T 1p91_A           84 DKATAVLDIGC-GE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLP------FSDTSMDAIIRI  155 (269)
T ss_dssp             TTCCEEEEETC-TT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCS------BCTTCEEEEEEE
T ss_pred             CCCCEEEEECC-CC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCC------CCCCceeEEEEe
Confidence            57899999998 65 99999999886 78999999999988888765533 33332222110      123479999976


Q ss_pred             CChHHHHHhhccccCCCEEEEEecc
Q 020487          216 MGASYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       216 ~g~~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      .....+..+.+.|+|||+++.....
T Consensus       156 ~~~~~l~~~~~~L~pgG~l~~~~~~  180 (269)
T 1p91_A          156 YAPCKAEELARVVKPGGWVITATPG  180 (269)
T ss_dssp             SCCCCHHHHHHHEEEEEEEEEEEEC
T ss_pred             CChhhHHHHHHhcCCCcEEEEEEcC
Confidence            5555678888999999999987543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=96.76  E-value=0.006  Score=56.02  Aligned_cols=78  Identities=18%  Similarity=0.299  Sum_probs=52.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhh---H----HHHHHcCCCE-EE--eCCCchHHHHHHHHhC
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK---L----AVCKDLGADV-CI--NYKTEDFVARVKEETG  205 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~---~----~~~~~~g~~~-~~--~~~~~~~~~~~~~~~~  205 (325)
                      ++++.++||+|++|.+|..++..+...|+ +|+++.++...   .    +.++..|... ++  |-.+......+.+.  
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~--  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA--  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH--
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc--
Confidence            46789999999999999999999988999 69999887632   1    2333445432 22  22232222222222  


Q ss_pred             CCcccEEEeCCC
Q 020487          206 GKGVDVILDCMG  217 (325)
Q Consensus       206 ~~~~d~vi~~~g  217 (325)
                       ..+|+||.+.|
T Consensus       334 -~~ld~VVh~AG  344 (511)
T 2z5l_A          334 -YPPNAVFHTAG  344 (511)
T ss_dssp             -SCCSEEEECCC
T ss_pred             -CCCcEEEECCc
Confidence             36999999987

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.75  E-value=0.0033  Score=51.67  Aligned_cols=75  Identities=25%  Similarity=0.300  Sum_probs=49.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCC--Cch----HHHHHHHHhCCCcccE
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK--TED----FVARVKEETGGKGVDV  211 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~----~~~~~~~~~~~~~~d~  211 (325)
                      ..+.+++|+|++|.+|.++++.+...|++|+++++++++..     +....+..+  +..    ..+.+.+..+..++|+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~   79 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   79 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            34788999999999999999999999999999998865432     111222112  111    1222233332237999


Q ss_pred             EEeCCC
Q 020487          212 ILDCMG  217 (325)
Q Consensus       212 vi~~~g  217 (325)
                      ++++.|
T Consensus        80 lv~~Ag   85 (241)
T 1dhr_A           80 ILCVAG   85 (241)
T ss_dssp             EEECCC
T ss_pred             EEEccc
Confidence            999987

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.74  E-value=0.00034  Score=57.95  Aligned_cols=74  Identities=31%  Similarity=0.368  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHH----HHHHHHhCCCcccEEEe
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV----ARVKEETGGKGVDVILD  214 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~d~vi~  214 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.++.+.+.  +  ...|-.+....    +.+.+..+  ++|++++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~--~~~D~~~~~~~~~~~~~~~~~~g--~id~lv~   87 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF--G--VEVDVTDSDAVDRAFTAVEEHQG--PVEVLVS   87 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE--E--EECCTTCHHHHHHHHHHHHHHHS--SCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc--C--eeccCCCHHHHHHHHHHHHHHcC--CCCEEEE
Confidence            4688999999999999999999999999999998765433211  1  22333332222    22333333  6899999


Q ss_pred             CCCh
Q 020487          215 CMGA  218 (325)
Q Consensus       215 ~~g~  218 (325)
                      +.|.
T Consensus        88 ~Ag~   91 (247)
T 1uzm_A           88 NAGL   91 (247)
T ss_dssp             ECSC
T ss_pred             CCCC
Confidence            9873

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.73  E-value=0.0017  Score=53.47  Aligned_cols=78  Identities=15%  Similarity=0.133  Sum_probs=49.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHH--HHHHHHh-CCCcccEEEeCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV--ARVKEET-GGKGVDVILDCM  216 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~-~~~~~d~vi~~~  216 (325)
                      +.+++|+|++|.+|.++++.+.. |++|+++.++.++.+.+.+......+..+..+..  ..+.+.. .-.++|++++++
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~A   83 (245)
T 3e9n_A            5 KKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAA   83 (245)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEECC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEECC
Confidence            67899999999999999988876 9999999999888877665432223222211110  0000111 112689999998


Q ss_pred             Ch
Q 020487          217 GA  218 (325)
Q Consensus       217 g~  218 (325)
                      |.
T Consensus        84 g~   85 (245)
T 3e9n_A           84 AV   85 (245)
T ss_dssp             --
T ss_pred             Cc
Confidence            74

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.72  E-value=0.0026  Score=54.95  Aligned_cols=82  Identities=18%  Similarity=0.128  Sum_probs=49.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH--HHHHHcC--CC-EEEeCCCchHHHHHHHHhCCCccc
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL--AVCKDLG--AD-VCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~--~~~~~~g--~~-~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      .-+++.+|||+|++|.+|..+++.+...|++|++++++..+.  ..++.+.  .. .++..+-.+ .+.+.+...+..+|
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d   88 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD-ACSVQRAVIKAQPQ   88 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTC-HHHHHHHHHHHCCS
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCC-HHHHHHHHHHcCCC
Confidence            347889999999999999999999998999999999876531  2223321  11 222222211 22233322211579


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      +||.|++.
T Consensus        89 ~Vih~A~~   96 (335)
T 1rpn_A           89 EVYNLAAQ   96 (335)
T ss_dssp             EEEECCSC
T ss_pred             EEEECccc
Confidence            99999873

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=96.71  E-value=0.011  Score=49.44  Aligned_cols=77  Identities=22%  Similarity=0.352  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cChhhHHHH----HHcCCC-EEE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGAD-VCI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~-~~~~~~~~~----~~~g~~-~~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++. ++.+..+..    +..+.. ..+  |-.+...    .+.+.+..+ 
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g-  102 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG-  102 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC-
Confidence            467899999999999999999999999999998 554444332    223332 233  3333222    233333444 


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                       ++|++|+++|
T Consensus       103 -~id~li~nAg  112 (269)
T 3gk3_A          103 -KVDVLINNAG  112 (269)
T ss_dssp             -CCSEEEECCC
T ss_pred             -CCCEEEECCC
Confidence             6899999987

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=96.71  E-value=0.0089  Score=50.99  Aligned_cols=70  Identities=14%  Similarity=0.160  Sum_probs=50.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .+|||+|++|.+|..+++.+...|.+|++++++..... ++  +. .++..+-.  .+.+.+...  ++|+||.|++.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~--~~-~~~~~Dl~--~~~~~~~~~--~~d~Vih~a~~   72 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN--DY-EYRVSDYT--LEDLINQLN--DVDAVVHLAAT   72 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CC-EEEECCCC--HHHHHHHTT--TCSEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC--ce-EEEEcccc--HHHHHHhhc--CCCEEEEcccc
Confidence            58999999999999999999999999999999844444 33  32 33333322  455666654  79999999873

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.71  E-value=0.0042  Score=51.42  Aligned_cols=98  Identities=20%  Similarity=0.212  Sum_probs=63.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHH-Hh-CCCcccEEEeCCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE-ET-GGKGVDVILDCMG  217 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~-~~~~~d~vi~~~g  217 (325)
                      +.+++|+|++|.+|.++++.+...|++|++++++.++...     ....++-.+......+.+ .. ...++|++++++|
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~-----~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag   96 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-----HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAG   96 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS-----EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-----cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            6789999999999999999999999999999988765321     111222223222222222 21 1236899999987


Q ss_pred             h------------HH---------------HHHhhccccCCCEEEEEeccCC
Q 020487          218 A------------SY---------------FQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       218 ~------------~~---------------~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                      .            +.               +..+...++++|++|.+++...
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  148 (251)
T 3orf_A           97 GWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAA  148 (251)
T ss_dssp             CCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             cCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhh
Confidence            2            00               1233445666789999876543

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.70  E-value=0.0074  Score=50.10  Aligned_cols=94  Identities=13%  Similarity=0.088  Sum_probs=65.2

Q ss_pred             CcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHH
Q 020487          120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR  199 (325)
Q Consensus       120 l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  199 (325)
                      +|+........|.+..  -.|.+++|.|.++.+|..+++++...|++|++..+..                   .+..+.
T Consensus       132 ~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t-------------------~~L~~~  190 (276)
T 3ngx_A          132 VPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT-------------------KDIGSM  190 (276)
T ss_dssp             CCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------------SCHHHH
T ss_pred             CCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc-------------------ccHHHh
Confidence            3433334444454443  5699999999977899999999999999999886421                   222222


Q ss_pred             HHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487          200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       200 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      ++      .+|++|.++|.+.+ ---+++++|..++++|...
T Consensus       191 ~~------~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  225 (276)
T 3ngx_A          191 TR------SSKIVVVAVGRPGF-LNREMVTPGSVVIDVGINY  225 (276)
T ss_dssp             HH------HSSEEEECSSCTTC-BCGGGCCTTCEEEECCCEE
T ss_pred             hc------cCCEEEECCCCCcc-ccHhhccCCcEEEEeccCc
Confidence            22      57999999997653 1236689999999998654

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=96.70  E-value=0.0056  Score=52.45  Aligned_cols=76  Identities=21%  Similarity=0.185  Sum_probs=48.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      .++..+|||+|++|.+|..+++.+...|++|++++++... +.   ++. ..+..+-.+ .+.+.+...+.++|+||.|+
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~---l~~-~~~~~Dl~d-~~~~~~~~~~~~~d~vih~A   82 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL---PNV-EMISLDIMD-SQRVKKVISDIKPDYIFHLA   82 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC---TTE-EEEECCTTC-HHHHHHHHHHHCCSEEEECC
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc---cee-eEEECCCCC-HHHHHHHHHhcCCCEEEEcC
Confidence            3566889999999999999999999899999999987654 21   222 222222211 22233322222589999998


Q ss_pred             Ch
Q 020487          217 GA  218 (325)
Q Consensus       217 g~  218 (325)
                      +.
T Consensus        83 ~~   84 (321)
T 2pk3_A           83 AK   84 (321)
T ss_dssp             SC
T ss_pred             cc
Confidence            73

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.69  E-value=0.01  Score=49.93  Aligned_cols=79  Identities=14%  Similarity=0.165  Sum_probs=58.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      -.|.+++|+|.++.+|..+++++...|++|++..+.....+                     +.+.+.  .+|++|.++|
T Consensus       163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~---------------------l~~~~~--~ADIVI~Avg  219 (300)
T 4a26_A          163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED---------------------MIDYLR--TADIVIAAMG  219 (300)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH---------------------HHHHHH--TCSEEEECSC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch---------------------hhhhhc--cCCEEEECCC
Confidence            36899999999778999999999999999998875322111                     002221  5899999999


Q ss_pred             hHHHHHhhccccCCCEEEEEecc
Q 020487          218 ASYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       218 ~~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      .+.+ ---++++++..++++|..
T Consensus       220 ~p~~-I~~~~vk~GavVIDvgi~  241 (300)
T 4a26_A          220 QPGY-VKGEWIKEGAAVVDVGTT  241 (300)
T ss_dssp             CTTC-BCGGGSCTTCEEEECCCE
T ss_pred             CCCC-CcHHhcCCCcEEEEEecc
Confidence            7643 123668999999999864

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.68  E-value=0.0039  Score=53.82  Aligned_cols=76  Identities=18%  Similarity=0.146  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHc-----CCC-EEE---eCCCchHHHHHHHHhCCCc
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-----GAD-VCI---NYKTEDFVARVKEETGGKG  208 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~-----g~~-~~~---~~~~~~~~~~~~~~~~~~~  208 (325)
                      -++.+|||+|++|.+|..++..+...|++|++++++..+.+.+.+.     +.. ..+   |..+..   .+.+...  +
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~   83 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQG---AYDEVIK--G   83 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTT---TTTTTTT--T
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChH---HHHHHHc--C
Confidence            4578999999999999999999988999999999987765544321     222 222   222211   1222222  6


Q ss_pred             ccEEEeCCCh
Q 020487          209 VDVILDCMGA  218 (325)
Q Consensus       209 ~d~vi~~~g~  218 (325)
                      +|+||.+++.
T Consensus        84 ~d~vih~A~~   93 (342)
T 1y1p_A           84 AAGVAHIASV   93 (342)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEEeCCC
Confidence            8999999863

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.68  E-value=0.004  Score=52.40  Aligned_cols=96  Identities=16%  Similarity=0.154  Sum_probs=63.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      +|||+|++|.+|..+++.+...  |++|++++++..+...+...+.. ++..+-.+ .+.+.+...  ++|+||.+.+..
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~-~~~~D~~d-~~~l~~~~~--~~d~vi~~a~~~   77 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVE-VRHGDYNQ-PESLQKAFA--GVSKLLFISGPH   77 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCE-EEECCTTC-HHHHHHHTT--TCSEEEECCCCC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCe-EEEeccCC-HHHHHHHHh--cCCEEEEcCCCC
Confidence            5899999999999999988887  89999999987766555444443 33222222 234555554  589999998731


Q ss_pred             --------HHHHhhccccC-C-CEEEEEeccC
Q 020487          220 --------YFQRNLGSLNI-D-GRLFIIGTQG  241 (325)
Q Consensus       220 --------~~~~~~~~l~~-~-g~~v~~g~~~  241 (325)
                              ....+++.+.. + +++|.++...
T Consensus        78 ~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           78 YDNTLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             cCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence                    12334444433 3 4888876644

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=96.68  E-value=0.0037  Score=54.02  Aligned_cols=42  Identities=17%  Similarity=0.122  Sum_probs=37.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cChhhHHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC  180 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~-~~~~~~~~~  180 (325)
                      .+.++||+|+++.+|.++++.+...|++|++++ ++.++.+.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~   87 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANAL   87 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence            468899999999999999999999999999999 888766543

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=96.67  E-value=0.01  Score=52.20  Aligned_cols=82  Identities=18%  Similarity=0.232  Sum_probs=54.0

Q ss_pred             cCC-CCCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEecChhh----------------HHHHHHcCCCE-EEeCC--C
Q 020487          135 SHL-SPGESFLVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEK----------------LAVCKDLGADV-CINYK--T  193 (325)
Q Consensus       135 ~~~-~~~~~vli~g~~g~~G~~~~~~a~~-~g~~v~~~~~~~~~----------------~~~~~~~g~~~-~~~~~--~  193 (325)
                      ..+ ..++++||+|+++++|++++..+.. .|++|+++.++.+.                .+.+++.|... .+..+  +
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd  120 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFS  120 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTS
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCC
Confidence            344 4578889999999999999888888 89999998765432                12334555442 23222  2


Q ss_pred             ch----HHHHHHHHhCCCcccEEEeCCCh
Q 020487          194 ED----FVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       194 ~~----~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      ..    ..+.+.+..|  ++|++++++|.
T Consensus       121 ~~~v~~~v~~i~~~~G--~IDiLVNNAG~  147 (405)
T 3zu3_A          121 DEIKQLTIDAIKQDLG--QVDQVIYSLAS  147 (405)
T ss_dssp             HHHHHHHHHHHHHHTS--CEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcC--CCCEEEEcCcc
Confidence            22    2334444454  69999999875

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.67  E-value=0.0058  Score=51.96  Aligned_cols=92  Identities=15%  Similarity=0.089  Sum_probs=64.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHH-HHcCCC--EEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC-KDLGAD--VCINYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~-~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      .+.+++|+|+ |.+|.+++..+...|+ +|++..++.++.+.+ ++++..  .+.+      ...+.+..  ..+|+||+
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~------~~~~~~~~--~~aDivIn  210 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS------LAEAETRL--AEYDIIIN  210 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC------HHHHHHTG--GGCSEEEE
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee------HHHHHhhh--ccCCEEEE
Confidence            5789999998 8999999999999998 999999998876544 455542  2221      12333333  26899999


Q ss_pred             CCChHHHH------HhhccccCCCEEEEEec
Q 020487          215 CMGASYFQ------RNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       215 ~~g~~~~~------~~~~~l~~~g~~v~~g~  239 (325)
                      |++.....      .....++++..++++..
T Consensus       211 ~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          211 TTSVGMHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             CSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             CCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            99864321      11345677777777753

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.66  E-value=0.0077  Score=49.72  Aligned_cols=73  Identities=21%  Similarity=0.223  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEE--eCCCchHHH----HHHHHhCCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDFVA----RVKEETGGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~----~~~~~~~~~~~d~v  212 (325)
                      .+.+++|+|++|.+|.++++.+...|++|++++++.+.    ++.+. ..+  |-.+.....    .+.+..+  ++|++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~-~~~~~D~~d~~~~~~~~~~~~~~~g--~id~l   78 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----EQYPF-ATEVMDVADAAQVAQVCQRLLAETE--RLDAL   78 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----SCCSS-EEEECCTTCHHHHHHHHHHHHHHCS--CCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----hcCCc-eEEEcCCCCHHHHHHHHHHHHHHcC--CCCEE
Confidence            36789999999999999999999999999999987652    12332 222  333322222    2222333  68999


Q ss_pred             EeCCCh
Q 020487          213 LDCMGA  218 (325)
Q Consensus       213 i~~~g~  218 (325)
                      +++.|.
T Consensus        79 v~~Ag~   84 (250)
T 2fwm_X           79 VNAAGI   84 (250)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999873

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.65  E-value=0.0036  Score=52.12  Aligned_cols=73  Identities=21%  Similarity=0.251  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEE--eCCCchH----HHHHHHHhCCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDF----VARVKEETGGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~----~~~~~~~~~~~~~d~v  212 (325)
                      .+.++||+|+++.+|.++++.+...|++|++++++.++....   .. ..+  |-.+...    .+.+.+..+  ++|++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~-~~~~~Dv~d~~~v~~~~~~~~~~~g--~iD~l  100 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP---DI-HTVAGDISKPETADRIVREGIERFG--RIDSL  100 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST---TE-EEEESCTTSHHHHHHHHHHHHHHHS--CCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC---ce-EEEEccCCCHHHHHHHHHHHHHHCC--CCCEE
Confidence            478999999999999999999999999999999876543211   11 222  3233222    223333444  69999


Q ss_pred             EeCCC
Q 020487          213 LDCMG  217 (325)
Q Consensus       213 i~~~g  217 (325)
                      ++++|
T Consensus       101 v~nAg  105 (260)
T 3un1_A          101 VNNAG  105 (260)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.64  E-value=0.0052  Score=55.48  Aligned_cols=90  Identities=18%  Similarity=0.186  Sum_probs=68.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      -.|.+++|+|. |.+|..+++.++.+|++|++..++..+.......|+. +.         .+.+...  ..|+|+.+.+
T Consensus       255 l~GktVgIIG~-G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~-~~---------~l~ell~--~aDiVi~~~~  321 (479)
T 1v8b_A          255 ISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFN-VV---------TLDEIVD--KGDFFITCTG  321 (479)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCE-EC---------CHHHHTT--TCSEEEECCS
T ss_pred             cCCCEEEEEee-CHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCE-ec---------CHHHHHh--cCCEEEECCC
Confidence            36889999997 9999999999999999999999988765444455552 21         1233332  5899999976


Q ss_pred             hHH-H-HHhhccccCCCEEEEEecc
Q 020487          218 ASY-F-QRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       218 ~~~-~-~~~~~~l~~~g~~v~~g~~  240 (325)
                      ... + ...++.|+++..++.+|..
T Consensus       322 t~~lI~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          322 NVDVIKLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             SSSSBCHHHHTTCCTTCEEEECSST
T ss_pred             hhhhcCHHHHhhcCCCcEEEEeCCC
Confidence            544 2 4667889999999998753

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.64  E-value=0.018  Score=49.29  Aligned_cols=89  Identities=15%  Similarity=0.097  Sum_probs=65.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHHHcCCC-EEEeCCCc-hHHHHHHHHhCCCcccEEEeCC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGAD-VCINYKTE-DFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      .+|.|+|. |.+|.+.++.++..|.  +|++.++++++.+.+++.|.. ........ ..          ...|+||-|+
T Consensus        34 ~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~----------~~aDvVilav  102 (314)
T 3ggo_A           34 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVED----------FSPDFVMLSS  102 (314)
T ss_dssp             SEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGG----------GCCSEEEECS
T ss_pred             CEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhh----------ccCCEEEEeC
Confidence            68999997 9999999999999998  999999999998888888863 23222111 11          2689999999


Q ss_pred             ChHHH----HHhhccccCCCEEEEEecc
Q 020487          217 GASYF----QRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       217 g~~~~----~~~~~~l~~~g~~v~~g~~  240 (325)
                      .....    ..+...++++..++++++.
T Consensus       103 p~~~~~~vl~~l~~~l~~~~iv~d~~Sv  130 (314)
T 3ggo_A          103 PVRTFREIAKKLSYILSEDATVTDQGSV  130 (314)
T ss_dssp             CGGGHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             CHHHHHHHHHHHhhccCCCcEEEECCCC
Confidence            87543    3444556777777776543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.64  E-value=0.0033  Score=49.91  Aligned_cols=97  Identities=12%  Similarity=0.142  Sum_probs=62.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  220 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~  220 (325)
                      .+++|+|++|.+|..+++.+...|.+|++++++..+.......+. .++..+-.+ .+.+.+...  ++|++|.+.+...
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~-~~~~~~~~~--~~d~vi~~a~~~~   79 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPA-HVVVGDVLQ-AADVDKTVA--GQDAVIVLLGTRN   79 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCS-EEEESCTTS-HHHHHHHHT--TCSEEEECCCCTT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCce-EEEEecCCC-HHHHHHHHc--CCCEEEECccCCC
Confidence            689999999999999999999999999999998765432111112 233333222 234455543  5899999987421


Q ss_pred             -----------HHHhhccccC--CCEEEEEeccC
Q 020487          221 -----------FQRNLGSLNI--DGRLFIIGTQG  241 (325)
Q Consensus       221 -----------~~~~~~~l~~--~g~~v~~g~~~  241 (325)
                                 ...+++.+..  -++++.++...
T Consensus        80 ~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~  113 (206)
T 1hdo_A           80 DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAF  113 (206)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred             CCCccchHHHHHHHHHHHHHHhCCCeEEEEeeee
Confidence                       2333333332  35888776543

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.64  E-value=0.0036  Score=50.08  Aligned_cols=98  Identities=12%  Similarity=-0.010  Sum_probs=67.5

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC--EEEeCCCchHHHHHHHHhCC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~~~  206 (325)
                      ....++++++||-+|+ | .|..+..+++. +.+|+.++.+++..+.+++    .+..  .++..+....      ....
T Consensus        71 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~------~~~~  141 (210)
T 3lbf_A           71 ELLELTPQSRVLEIGT-G-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQG------WQAR  141 (210)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC------CGGG
T ss_pred             HhcCCCCCCEEEEEcC-C-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccC------CccC
Confidence            5567789999999997 4 48888888887 8899999999988776653    3433  2222222111      0112


Q ss_pred             CcccEEEeCCChHHH-HHhhccccCCCEEEEEec
Q 020487          207 KGVDVILDCMGASYF-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       207 ~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~g~  239 (325)
                      ..||+|+.+.....+ ..+.+.|++||+++..-.
T Consensus       142 ~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~~  175 (210)
T 3lbf_A          142 APFDAIIVTAAPPEIPTALMTQLDEGGILVLPVG  175 (210)
T ss_dssp             CCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEEC
T ss_pred             CCccEEEEccchhhhhHHHHHhcccCcEEEEEEc
Confidence            479999987654332 456789999999987643

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.62  E-value=0.0047  Score=56.00  Aligned_cols=91  Identities=15%  Similarity=0.157  Sum_probs=68.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      -.|.+++|+|. |.+|..+++.++.+|++|++.+++..+.......|.. +.         .+.+...  ..|+|+.+++
T Consensus       275 L~GktVgIIG~-G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~-~~---------~l~ell~--~aDiVi~~~~  341 (494)
T 3d64_A          275 IAGKIAVVAGY-GDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYR-VV---------TMEYAAD--KADIFVTATG  341 (494)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCE-EC---------CHHHHTT--TCSEEEECSS
T ss_pred             cCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCE-eC---------CHHHHHh--cCCEEEECCC
Confidence            35889999997 9999999999999999999999988765344445543 21         1233333  5899999986


Q ss_pred             hHH-H-HHhhccccCCCEEEEEeccC
Q 020487          218 ASY-F-QRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       218 ~~~-~-~~~~~~l~~~g~~v~~g~~~  241 (325)
                      ... + ...++.|+++..++.+|...
T Consensus       342 t~~lI~~~~l~~MK~gAilINvgrg~  367 (494)
T 3d64_A          342 NYHVINHDHMKAMRHNAIVCNIGHFD  367 (494)
T ss_dssp             SSCSBCHHHHHHCCTTEEEEECSSSS
T ss_pred             cccccCHHHHhhCCCCcEEEEcCCCc
Confidence            543 2 46678899999999887643

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.62  E-value=0.0033  Score=51.46  Aligned_cols=73  Identities=18%  Similarity=0.269  Sum_probs=49.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCch------HHHHHHHHhCCCcccEEE
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED------FVARVKEETGGKGVDVIL  213 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~d~vi  213 (325)
                      +.+++|+|++|.+|.++++.+...|++|+++++++++.+     +....+..+-.+      ..+.+.+..+..++|+++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv   77 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF   77 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence            568999999999999999999999999999998876532     111222222111      122223333323799999


Q ss_pred             eCCC
Q 020487          214 DCMG  217 (325)
Q Consensus       214 ~~~g  217 (325)
                      ++.|
T Consensus        78 ~~Ag   81 (236)
T 1ooe_A           78 CVAG   81 (236)
T ss_dssp             ECCC
T ss_pred             ECCc
Confidence            9987

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.62  E-value=0.032  Score=44.91  Aligned_cols=92  Identities=11%  Similarity=0.029  Sum_probs=63.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  220 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~  220 (325)
                      +|+|+|+ |.+|..+++.+...|.+|+++++++++.+.+. ..+.. ++..+..+ ...+. ..+-..+|+++-+++.+.
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~-~i~gd~~~-~~~l~-~a~i~~ad~vi~~~~~d~   77 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKAT-IIHGDGSH-KEILR-DAEVSKNDVVVILTPRDE   77 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSE-EEESCTTS-HHHHH-HHTCCTTCEEEECCSCHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCe-EEEcCCCC-HHHHH-hcCcccCCEEEEecCCcH
Confidence            5899998 99999999999999999999999999887765 45553 44333333 22233 334457999999999765


Q ss_pred             HH----HhhccccCCCEEEEE
Q 020487          221 FQ----RNLGSLNIDGRLFII  237 (325)
Q Consensus       221 ~~----~~~~~l~~~g~~v~~  237 (325)
                      ..    ...+.+.+..+++..
T Consensus        78 ~n~~~~~~a~~~~~~~~iia~   98 (218)
T 3l4b_C           78 VNLFIAQLVMKDFGVKRVVSL   98 (218)
T ss_dssp             HHHHHHHHHHHTSCCCEEEEC
T ss_pred             HHHHHHHHHHHHcCCCeEEEE
Confidence            32    223334455566653

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=96.61  E-value=0.00067  Score=56.32  Aligned_cols=98  Identities=15%  Similarity=0.143  Sum_probs=70.6

Q ss_pred             HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHH
Q 020487          132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKE  202 (325)
Q Consensus       132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~  202 (325)
                      .....++++++||-.|+ |. |..+..+++..  +.+|+.++.+++..+.+++    .|..   .++..+..       +
T Consensus        86 ~~~~~~~~~~~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~-------~  156 (255)
T 3mb5_A           86 VAYAGISPGDFIVEAGV-GS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIY-------E  156 (255)
T ss_dssp             HHHTTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGG-------G
T ss_pred             HHhhCCCCCCEEEEecC-Cc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchh-------h
Confidence            35667889999999997 43 88888888885  5799999999887776653    3432   22222211       1


Q ss_pred             HhCCCcccEEEeCCChH--HHHHhhccccCCCEEEEEe
Q 020487          203 ETGGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       203 ~~~~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g  238 (325)
                      ......+|+|+...+..  .+..+.+.|+++|+++...
T Consensus       157 ~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          157 GIEEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             CCCCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ccCCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            13344699999877754  5788889999999999874

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=96.59  E-value=0.0051  Score=53.18  Aligned_cols=78  Identities=15%  Similarity=0.197  Sum_probs=50.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH--HHHHHcCC--C-EEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL--AVCKDLGA--D-VCINYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~--~~~~~~g~--~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      +.+|||+|++|.+|..+++.+...|++|++++++..+.  ..++.++.  . ..+..+-.+ .+.+.+...+.++|+||.
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLE-FSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTC-HHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCC-HHHHHHHHHhcCCCEEEE
Confidence            57899999999999999999988999999999876542  23344321  1 222222111 122222222115799999


Q ss_pred             CCCh
Q 020487          215 CMGA  218 (325)
Q Consensus       215 ~~g~  218 (325)
                      +++.
T Consensus        82 ~A~~   85 (345)
T 2z1m_A           82 LAAQ   85 (345)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9873

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.59  E-value=0.012  Score=55.34  Aligned_cols=78  Identities=18%  Similarity=0.265  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh---------hhHH----HHHHcCCCEEEeCCCc----hHHHHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---------EKLA----VCKDLGADVCINYKTE----DFVARVK  201 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~---------~~~~----~~~~~g~~~~~~~~~~----~~~~~~~  201 (325)
                      .+++++|+|+++++|.+++..+...|++|++.+++.         ++.+    .+++.|...+.|..+.    ...+.+.
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            478899999999999999999999999999987653         2222    2333454444454432    2334444


Q ss_pred             HHhCCCcccEEEeCCCh
Q 020487          202 EETGGKGVDVILDCMGA  218 (325)
Q Consensus       202 ~~~~~~~~d~vi~~~g~  218 (325)
                      +..|  .+|+++++.|.
T Consensus        87 ~~~G--~iDiLVnNAGi  101 (604)
T 2et6_A           87 KNFG--TVHVIINNAGI  101 (604)
T ss_dssp             HHHS--CCCEEEECCCC
T ss_pred             HHcC--CCCEEEECCCC
Confidence            5555  69999999873

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.59  E-value=0.011  Score=48.88  Aligned_cols=101  Identities=14%  Similarity=0.128  Sum_probs=71.1

Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC----EEEeCCCchHHHHHHHHhCC
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD----VCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~  206 (325)
                      +.....++++.+||-+|+ | .|..+..+++..+++|++++.++...+.+++....    .++..+....      ....
T Consensus        47 ~~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~------~~~~  118 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIGS-G-LGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTK------EFPE  118 (266)
T ss_dssp             HTTTCCCCTTCEEEEETC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTC------CCCT
T ss_pred             HHHhcCCCCCCEEEEECC-C-CCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccC------CCCC
Confidence            446667889999999997 3 68888888887789999999999998888865422    2222222111      0123


Q ss_pred             CcccEEEeCCCh---------HHHHHhhccccCCCEEEEEec
Q 020487          207 KGVDVILDCMGA---------SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       207 ~~~d~vi~~~g~---------~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ..||+|+.+..-         ..+..+.+.|+|||+++....
T Consensus       119 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          119 NNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             TCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            479999976432         125677889999999998754

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.59  E-value=0.012  Score=49.59  Aligned_cols=77  Identities=16%  Similarity=0.116  Sum_probs=58.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+++|+|++..+|..+++++...|++|++..+.                   ..+    +.+.+.  .+|+||.++|.
T Consensus       164 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~-------------------t~~----L~~~~~--~ADIVI~Avg~  218 (301)
T 1a4i_A          164 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK-------------------TAH----LDEEVN--KGDILVVATGQ  218 (301)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT-------------------CSS----HHHHHT--TCSEEEECCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC-------------------ccc----HHHHhc--cCCEEEECCCC
Confidence            68899999996679999999999999999987532                   112    223332  68999999998


Q ss_pred             HHHHHhhccccCCCEEEEEeccC
Q 020487          219 SYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       219 ~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      +.+ ---+++++|..+|++|...
T Consensus       219 p~~-I~~~~vk~GavVIDVgi~~  240 (301)
T 1a4i_A          219 PEM-VKGEWIKPGAIVIDCGINY  240 (301)
T ss_dssp             TTC-BCGGGSCTTCEEEECCCBC
T ss_pred             ccc-CCHHHcCCCcEEEEccCCC
Confidence            754 2235688999999998754

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=96.58  E-value=0.014  Score=50.89  Aligned_cols=99  Identities=10%  Similarity=0.031  Sum_probs=62.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH--HHHHHcCCCEEEeCC-CchHHHHHHHHhCCCcccEEEeCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL--AVCKDLGADVCINYK-TEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~--~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      +.+|+|+|++|.+|..+++.+...|++|++++++.++.  ..+.+...-.++..+ -.+ .+.+.+...  ++|.||.+.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d-~~~l~~~~~--~~d~Vi~~a   81 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN-VPLMDTLFE--GAHLAFINT   81 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTC-HHHHHHHHT--TCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCC-HHHHHHHHh--cCCEEEEcC
Confidence            46799999999999999999888899999999887654  333332112233333 212 234445443  589999776


Q ss_pred             ChH------HHHHhhccccC-C--CEEEEEeccC
Q 020487          217 GAS------YFQRNLGSLNI-D--GRLFIIGTQG  241 (325)
Q Consensus       217 g~~------~~~~~~~~l~~-~--g~~v~~g~~~  241 (325)
                      +..      ....+++.+.. +  +++|.++...
T Consensus        82 ~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~  115 (352)
T 1xgk_A           82 TSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD  115 (352)
T ss_dssp             CSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred             CCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence            532      12333444333 3  5888886643

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.58  E-value=0.011  Score=44.64  Aligned_cols=94  Identities=18%  Similarity=0.144  Sum_probs=61.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-hhhHHHHHH---cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVCKD---LGADVCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      ..+++|+|+ |.+|..+++.+...|.+|++++++ +++.+.+.+   .|. .++..+..+ .+.+.+ .+-.++|.++-+
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~-~~i~gd~~~-~~~l~~-a~i~~ad~vi~~   78 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNA-DVIPGDSND-SSVLKK-AGIDRCRAILAL   78 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTC-EEEESCTTS-HHHHHH-HTTTTCSEEEEC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCC-eEEEcCCCC-HHHHHH-cChhhCCEEEEe
Confidence            457899997 999999999999999999999986 455444432   233 344333322 223333 233478999999


Q ss_pred             CChHHH----HHhhccccCCCEEEEE
Q 020487          216 MGASYF----QRNLGSLNIDGRLFII  237 (325)
Q Consensus       216 ~g~~~~----~~~~~~l~~~g~~v~~  237 (325)
                      ++.+..    ....+.+.+..+++..
T Consensus        79 ~~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           79 SDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             SSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             cCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            987543    2334455566677764

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.57  E-value=0.011  Score=50.31  Aligned_cols=75  Identities=16%  Similarity=0.240  Sum_probs=52.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh-------hhHHHHH---HcCCCEEEeCCCchHHHHHHHHhCCCcc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-------EKLAVCK---DLGADVCINYKTEDFVARVKEETGGKGV  209 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~-------~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~  209 (325)
                      +.+|+|+|++|.+|..+++.+...|.+|++++++.       ++.+.++   ..+.. ++..+-.+ .+.+.+...  ++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~d-~~~l~~~~~--~~   77 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVI-LLEGDIND-HETLVKAIK--QV   77 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCE-EEECCTTC-HHHHHHHHT--TC
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCE-EEEeCCCC-HHHHHHHHh--CC
Confidence            35799999999999999999888899999999886       4443332   33443 33222222 234555554  69


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |+||.+++.
T Consensus        78 d~vi~~a~~   86 (307)
T 2gas_A           78 DIVICAAGR   86 (307)
T ss_dssp             SEEEECSSS
T ss_pred             CEEEECCcc
Confidence            999999884

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=96.56  E-value=0.0024  Score=53.33  Aligned_cols=71  Identities=20%  Similarity=0.219  Sum_probs=50.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC-EEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      +.+|+|+|++|.+|..+++.+...|++|+++++++.+..     +.. ..+..+-.+ .+.+.+...  ++|++|++.|.
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----~~~~~~~~~Dl~d-~~~~~~~~~--~~D~vi~~Ag~   74 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----GPNEECVQCDLAD-ANAVNAMVA--GCDGIVHLGGI   74 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----CTTEEEEECCTTC-HHHHHHHHT--TCSEEEECCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----CCCCEEEEcCCCC-HHHHHHHHc--CCCEEEECCCC
Confidence            467999999999999999999999999999998865433     222 222222222 334445444  68999999874

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.55  E-value=0.0033  Score=51.61  Aligned_cols=97  Identities=15%  Similarity=0.150  Sum_probs=65.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHHhC-
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEETG-  205 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~-  205 (325)
                      ...++.+||-+|+ | .|..+..+++..  +.+|+.++.+++..+.+++    .|..   .++..+   ..+.+.+... 
T Consensus        57 ~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d---~~~~~~~~~~~  131 (239)
T 2hnk_A           57 KISGAKRIIEIGT-F-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGS---ALETLQVLIDS  131 (239)
T ss_dssp             HHHTCSEEEEECC-T-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC---HHHHHHHHHHC
T ss_pred             HhhCcCEEEEEeC-C-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECC---HHHHHHHHHhh
Confidence            3457889999997 4 588899999987  5799999999987776653    3432   222222   1222222211 


Q ss_pred             ------------C-CcccEEEeCCChH----HHHHhhccccCCCEEEEE
Q 020487          206 ------------G-KGVDVILDCMGAS----YFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       206 ------------~-~~~d~vi~~~g~~----~~~~~~~~l~~~g~~v~~  237 (325)
                                  + ..||+|+......    .+..+.+.|++||.++..
T Consensus       132 ~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  180 (239)
T 2hnk_A          132 KSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIAD  180 (239)
T ss_dssp             SSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence                        1 4799999876643    356778899999999874

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.54  E-value=0.021  Score=47.94  Aligned_cols=87  Identities=15%  Similarity=0.111  Sum_probs=62.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHHHcCCCE-EEeCCCchHHHHHHHHhCCC-cccEEEeCCC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVARVKEETGGK-GVDVILDCMG  217 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~-~~d~vi~~~g  217 (325)
                      +|.|+|+ |.+|.+.++.+...|.  +|++.++++++.+.+++.|... ... +..       +..  . .+|+|+.|+.
T Consensus         3 ~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~-~~~-------~~~--~~~aDvVilavp   71 (281)
T 2g5c_A            3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT-SIA-------KVE--DFSPDFVMLSSP   71 (281)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES-CGG-------GGG--GTCCSEEEECSC
T ss_pred             EEEEEec-CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccC-CHH-------HHh--cCCCCEEEEcCC
Confidence            6899997 9999999999999898  9999999998888888877642 221 111       111  2 5899999999


Q ss_pred             hHHHHH----hhccccCCCEEEEEec
Q 020487          218 ASYFQR----NLGSLNIDGRLFIIGT  239 (325)
Q Consensus       218 ~~~~~~----~~~~l~~~g~~v~~g~  239 (325)
                      ......    +...++++..++.++.
T Consensus        72 ~~~~~~v~~~l~~~l~~~~iv~~~~~   97 (281)
T 2g5c_A           72 VRTFREIAKKLSYILSEDATVTDQGS   97 (281)
T ss_dssp             HHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             HHHHHHHHHHHHhhCCCCcEEEECCC
Confidence            765433    3345677776666544

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=96.53  E-value=0.012  Score=48.87  Aligned_cols=77  Identities=22%  Similarity=0.284  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecChhhH-----HHHH-HcCCCEE---EeCCCch----HHHHHHHH
Q 020487          139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKL-----AVCK-DLGADVC---INYKTED----FVARVKEE  203 (325)
Q Consensus       139 ~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~~~~-----~~~~-~~g~~~~---~~~~~~~----~~~~~~~~  203 (325)
                      .+.+++|+|++  +.+|.++++.+...|++|++++++..+.     +.+. ..+....   .|-.+..    +.+.+.+.
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            47899999998  8999999999999999999998775432     2222 2343322   1323322    22333333


Q ss_pred             hCCCcccEEEeCCC
Q 020487          204 TGGKGVDVILDCMG  217 (325)
Q Consensus       204 ~~~~~~d~vi~~~g  217 (325)
                      .+  .+|++|+++|
T Consensus        99 ~g--~id~li~nAg  110 (267)
T 3gdg_A           99 FG--QIDAFIANAG  110 (267)
T ss_dssp             TS--CCSEEEECCC
T ss_pred             cC--CCCEEEECCC
Confidence            43  6899999987

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=96.51  E-value=0.01  Score=51.50  Aligned_cols=94  Identities=16%  Similarity=0.225  Sum_probs=59.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh----hhHHHHH---HcCCCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE----EKLAVCK---DLGADVCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~----~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      ..+|||+|++|.+|..+++.+...|.+|++++|+.    ++.+.++   ..+.. ++..+-.+ .+.+.+.....++|+|
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~-~~~~Dl~d-~~~l~~~~~~~~~d~V   87 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAI-IVYGLINE-QEAMEKILKEHEIDIV   87 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCE-EEECCTTC-HHHHHHHHHHTTCCEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcE-EEEeecCC-HHHHHHHHhhCCCCEE
Confidence            35799999999999999999999999999999876    3443332   34443 33222222 2333443332369999


Q ss_pred             EeCCChHH---HHHhhccccCCC---EEE
Q 020487          213 LDCMGASY---FQRNLGSLNIDG---RLF  235 (325)
Q Consensus       213 i~~~g~~~---~~~~~~~l~~~g---~~v  235 (325)
                      |.+.+...   ...+++.++..|   +++
T Consensus        88 i~~a~~~n~~~~~~l~~aa~~~g~v~~~v  116 (346)
T 3i6i_A           88 VSTVGGESILDQIALVKAMKAVGTIKRFL  116 (346)
T ss_dssp             EECCCGGGGGGHHHHHHHHHHHCCCSEEE
T ss_pred             EECCchhhHHHHHHHHHHHHHcCCceEEe
Confidence            99998632   234444444333   555

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.51  E-value=0.011  Score=49.43  Aligned_cols=77  Identities=17%  Similarity=0.132  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+++|+|++..+|..+++++...|++|++..+..                   .+..+.++      .+|++|.++|.
T Consensus       158 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------------~~L~~~~~------~ADIVI~Avg~  212 (288)
T 1b0a_A          158 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT-------------------KNLRHHVE------NADLLIVAVGK  212 (288)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC-------------------SCHHHHHH------HCSEEEECSCC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc-------------------hhHHHHhc------cCCEEEECCCC
Confidence            689999999966789999999999999999986332                   22222222      58999999997


Q ss_pred             HHHHHhhccccCCCEEEEEeccC
Q 020487          219 SYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       219 ~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      +.+ ---+++++|..++++|...
T Consensus       213 p~l-I~~~~vk~GavVIDVgi~r  234 (288)
T 1b0a_A          213 PGF-IPGDWIKEGAIVIDVGINR  234 (288)
T ss_dssp             TTC-BCTTTSCTTCEEEECCCEE
T ss_pred             cCc-CCHHHcCCCcEEEEccCCc
Confidence            753 2235689999999998654

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.50  E-value=0.0033  Score=51.40  Aligned_cols=99  Identities=22%  Similarity=0.199  Sum_probs=67.7

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCCE--EEeCCCchHHHHHHHHhCC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV--CINYKTEDFVARVKEETGG  206 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~~~~  206 (325)
                      +...+.++++||.+|+ | .|..+..+++..+.+|+.++.+++..+.+++    .+...  +...+...      .....
T Consensus        85 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~------~~~~~  156 (235)
T 1jg1_A           85 EIANLKPGMNILEVGT-G-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK------GFPPK  156 (235)
T ss_dssp             HHHTCCTTCCEEEECC-T-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG------CCGGG
T ss_pred             HhcCCCCCCEEEEEeC-C-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCccc------CCCCC
Confidence            4456789999999997 4 6888888888876899999999887776653    44322  22222100      01112


Q ss_pred             CcccEEEeCCChHH-HHHhhccccCCCEEEEEec
Q 020487          207 KGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       207 ~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~  239 (325)
                      .+||+|+.+..... ...+.+.|++||+++..-.
T Consensus       157 ~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~  190 (235)
T 1jg1_A          157 APYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVG  190 (235)
T ss_dssp             CCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             CCccEEEECCcHHHHHHHHHHhcCCCcEEEEEEe
Confidence            35999998766543 3567789999999987643

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.50  E-value=0.0055  Score=49.20  Aligned_cols=99  Identities=19%  Similarity=0.081  Sum_probs=68.3

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHHH----cCCCE--EEeCCCchHHHHHHHHh
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGADV--CINYKTEDFVARVKEET  204 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~~  204 (325)
                      ....+.++++||.+|+ | .|..+..+++..|  .+|+.++.+++..+.+++    .+...  +...+....      ..
T Consensus        71 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~------~~  142 (215)
T 2yxe_A           71 ELLDLKPGMKVLEIGT-G-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLG------YE  142 (215)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGC------CG
T ss_pred             HhhCCCCCCEEEEECC-C-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC------CC
Confidence            4557789999999997 4 5888888888876  799999999887776653    33322  222221110      01


Q ss_pred             CCCcccEEEeCCChHHH-HHhhccccCCCEEEEEec
Q 020487          205 GGKGVDVILDCMGASYF-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       205 ~~~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~g~  239 (325)
                      ....||+|+.+.....+ ..+.+.|+++|+++..-.
T Consensus       143 ~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~  178 (215)
T 2yxe_A          143 PLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVG  178 (215)
T ss_dssp             GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             CCCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEEC
Confidence            12369999987665433 567789999999987743

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=96.49  E-value=0.014  Score=51.93  Aligned_cols=83  Identities=16%  Similarity=0.173  Sum_probs=52.4

Q ss_pred             hcCCCCCCEEEEEcCCchHHHH--HHHHHHHCCCEEEEEecChhh---------------H-HHHHHcCCCE-EE--eCC
Q 020487          134 TSHLSPGESFLVHGGSSGIGTF--AIQMGKCQGVRVFVTAGSEEK---------------L-AVCKDLGADV-CI--NYK  192 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~--~~~~a~~~g~~v~~~~~~~~~---------------~-~~~~~~g~~~-~~--~~~  192 (325)
                      ...+..+.++||+|+++++|++  .+......|++|+++.++...               . +..++.|... .+  |-.
T Consensus        54 ~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt  133 (418)
T 4eue_A           54 AIGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAF  133 (418)
T ss_dssp             SCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             cCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCC
Confidence            3445778999999999999999  665555669999999875322               1 2234455442 22  323


Q ss_pred             CchH----HHHHHHHhCCCcccEEEeCCCh
Q 020487          193 TEDF----VARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       193 ~~~~----~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      +...    .+.+.+..|  ++|++++++|.
T Consensus       134 d~~~v~~~v~~i~~~~G--~IDiLVnNAG~  161 (418)
T 4eue_A          134 SNETKDKVIKYIKDEFG--KIDLFVYSLAA  161 (418)
T ss_dssp             CHHHHHHHHHHHHHTTC--CEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcC--CCCEEEECCcc
Confidence            3222    223333333  69999999875

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.48  E-value=0.011  Score=50.38  Aligned_cols=87  Identities=13%  Similarity=0.186  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.++.|+|. |.+|..+++.++..|++|++.+++.++ +.+.+.|+.. .     +.. ++.+     ..|+|+.++..
T Consensus       141 ~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~-----~l~-ell~-----~aDvV~l~~p~  206 (307)
T 1wwk_A          141 EGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKF-V-----DLE-TLLK-----ESDVVTIHVPL  206 (307)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEE-C-----CHH-HHHH-----HCSEEEECCCC
T ss_pred             CCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCccc-c-----CHH-HHHh-----hCCEEEEecCC
Confidence            4789999998 999999999999999999999988766 4566677632 1     121 2221     57999998874


Q ss_pred             HH-----H-HHhhccccCCCEEEEEec
Q 020487          219 SY-----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 ~~-----~-~~~~~~l~~~g~~v~~g~  239 (325)
                      ..     + ...+..|++++.++.++.
T Consensus       207 ~~~t~~li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          207 VESTYHLINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             STTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             ChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence            21     2 345678999999998865

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.48  E-value=0.017  Score=48.65  Aligned_cols=98  Identities=20%  Similarity=0.231  Sum_probs=67.9

Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHc----CC--C-EEEeCCCchHHHHHHHH
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GA--D-VCINYKTEDFVARVKEE  203 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~----g~--~-~~~~~~~~~~~~~~~~~  203 (325)
                      +.....+.++.+||-+|+ | .|..+..+++..|++|+.++.+++..+.+++.    +.  . .+...+...+       
T Consensus        56 ~~~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-------  126 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVGC-G-WGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF-------  126 (287)
T ss_dssp             HHTTTTCCTTCEEEEETC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC-------
T ss_pred             HHHHcCCCCcCEEEEECC-c-ccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC-------
Confidence            345667889999999997 3 48888888877799999999999888777642    32  1 2222222111       


Q ss_pred             hCCCcccEEEeC-----CCh----HHHHHhhccccCCCEEEEEec
Q 020487          204 TGGKGVDVILDC-----MGA----SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       204 ~~~~~~d~vi~~-----~g~----~~~~~~~~~l~~~g~~v~~g~  239 (325)
                       . ..||+|+..     .+.    ..+..+.+.|+|||+++....
T Consensus       127 -~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  169 (287)
T 1kpg_A          127 -D-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  169 (287)
T ss_dssp             -C-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             -C-CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence             1 479999865     221    236777889999999987644

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.45  E-value=0.013  Score=49.90  Aligned_cols=75  Identities=24%  Similarity=0.368  Sum_probs=51.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh-----hhHHHHH---HcCCCEEEeCCCchHHHHHHHHhCCCcccE
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-----EKLAVCK---DLGADVCINYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~-----~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      ..+|+|+|++|.+|..+++.+...|.+|++++++.     ++.+.++   ..+. .++..+-.+ .+.+.+...  ++|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d-~~~l~~~~~--~~d~   79 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA-KLIEASLDD-HQRLVDALK--QVDV   79 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTC-EEECCCSSC-HHHHHHHHT--TCSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCe-EEEeCCCCC-HHHHHHHHh--CCCE
Confidence            35799999999999999999998999999999873     3433333   2333 333222222 334555554  6999


Q ss_pred             EEeCCCh
Q 020487          212 ILDCMGA  218 (325)
Q Consensus       212 vi~~~g~  218 (325)
                      ||.+++.
T Consensus        80 vi~~a~~   86 (313)
T 1qyd_A           80 VISALAG   86 (313)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999874

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=96.43  E-value=0.005  Score=54.03  Aligned_cols=76  Identities=16%  Similarity=0.017  Sum_probs=50.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +.+|||+|++|.+|..+++.+... |++|++++++..+...+.....-.++..+-..-...+.+...  ++|+||.|++
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~--~~d~Vih~A~  100 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK--KCDVILPLVA  100 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH--HCSEEEECBC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc--cCCEEEEcCc
Confidence            578999999999999999988887 899999999876654433222222332222201223333332  6899999877

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.43  E-value=0.0091  Score=49.34  Aligned_cols=98  Identities=16%  Similarity=0.065  Sum_probs=69.5

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHHc-----CCCE--EEeCCCchHHHHHHHH
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDL-----GADV--CINYKTEDFVARVKEE  203 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~-----g~~~--~~~~~~~~~~~~~~~~  203 (325)
                      ....+.++++||..|+ | .|..+..+++..  +.+|++++.+++..+.+++.     |.+.  +...+....      .
T Consensus        90 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~------~  161 (258)
T 2pwy_A           90 TLLDLAPGMRVLEAGT-G-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA------E  161 (258)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC------C
T ss_pred             HHcCCCCCCEEEEECC-C-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc------C
Confidence            5567889999999997 5 388888888885  57999999999888777642     5332  222221111      0


Q ss_pred             hCCCcccEEEeCCCh--HHHHHhhccccCCCEEEEEe
Q 020487          204 TGGKGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       204 ~~~~~~d~vi~~~g~--~~~~~~~~~l~~~g~~v~~g  238 (325)
                      .....+|+|+...+.  ..+..+.+.|+++|+++...
T Consensus       162 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  198 (258)
T 2pwy_A          162 LEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYL  198 (258)
T ss_dssp             CCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            223469999986664  34678889999999999875

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.43  E-value=0.018  Score=54.00  Aligned_cols=78  Identities=17%  Similarity=0.293  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh-h-hHHHHHHcCCCEEEeCCCc-----hHHHHHHHHhCCCcccE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-E-KLAVCKDLGADVCINYKTE-----DFVARVKEETGGKGVDV  211 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~-~-~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~d~  211 (325)
                      .|++++|+|+++++|.++++.+...|++|++..+.. + ..+.+++.|...+....+.     ...+.+.+..|  .+|+
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G--~iDi  398 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYG--TIDI  398 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHS--CCCE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcC--CCCE
Confidence            367899999999999999999999999999987432 2 2234445554333322222     12333444454  6999


Q ss_pred             EEeCCCh
Q 020487          212 ILDCMGA  218 (325)
Q Consensus       212 vi~~~g~  218 (325)
                      ++++.|.
T Consensus       399 LVnNAGi  405 (604)
T 2et6_A          399 LVNNAGI  405 (604)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999873

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=96.41  E-value=0.0083  Score=49.90  Aligned_cols=76  Identities=18%  Similarity=0.303  Sum_probs=50.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh-HHHHHH----cCCC-EEE--eCCCchH----HHHHHHHhCCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKD----LGAD-VCI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~-~~~~~~----~g~~-~~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      +.+++|+|+++.+|.++++.+...|++|+++.++.+. .+.+++    .+.. ..+  |-.+...    .+.+.+..+  
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g--   84 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG--   84 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS--
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC--
Confidence            5789999999999999999999999999999766543 333332    2222 222  3333222    223333333  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      ++|++|+++|
T Consensus        85 ~id~lv~~Ag   94 (264)
T 3i4f_A           85 KIDFLINNAG   94 (264)
T ss_dssp             CCCEEECCCC
T ss_pred             CCCEEEECCc
Confidence            6899999998

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.41  E-value=0.031  Score=47.52  Aligned_cols=87  Identities=13%  Similarity=-0.011  Sum_probs=62.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH-
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-  219 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-  219 (325)
                      .+|.|+|. |.+|...+..+...|.+|++.++++++.+.+.+.|.........+..          ...|+||-|+... 
T Consensus         8 ~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~----------~~aDvvi~~vp~~~   76 (303)
T 3g0o_A            8 FHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFA----------GVVDALVILVVNAA   76 (303)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTT----------TTCSEEEECCSSHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHH----------hcCCEEEEECCCHH
Confidence            57999998 99999999999999999999999999998888877654222211111          2578898888864 


Q ss_pred             HHHHhh-------ccccCCCEEEEEe
Q 020487          220 YFQRNL-------GSLNIDGRLFIIG  238 (325)
Q Consensus       220 ~~~~~~-------~~l~~~g~~v~~g  238 (325)
                      .+...+       ..++++..++.++
T Consensus        77 ~~~~v~~~~~~l~~~l~~g~ivv~~s  102 (303)
T 3g0o_A           77 QVRQVLFGEDGVAHLMKPGSAVMVSS  102 (303)
T ss_dssp             HHHHHHC--CCCGGGSCTTCEEEECS
T ss_pred             HHHHHHhChhhHHhhCCCCCEEEecC
Confidence            344333       3455666666553

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.40  E-value=0.0085  Score=51.79  Aligned_cols=87  Identities=13%  Similarity=0.042  Sum_probs=65.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.++.|+|. |.+|..+++.++..|++|++.+++..+ +.+.+.|+...      +    +.+...  ..|+|+.|++.
T Consensus       164 ~g~tvgIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~------~----l~ell~--~aDvV~l~~P~  229 (335)
T 2g76_A          164 NGKTLGILGL-GRIGREVATRMQSFGMKTIGYDPIISP-EVSASFGVQQL------P----LEEIWP--LCDFITVHTPL  229 (335)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTCEEC------C----HHHHGG--GCSEEEECCCC
T ss_pred             CcCEEEEEeE-CHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCceeC------C----HHHHHh--cCCEEEEecCC
Confidence            4789999998 999999999999999999999987655 35566776321      1    122222  58999999875


Q ss_pred             HH-----H-HHhhccccCCCEEEEEec
Q 020487          219 SY-----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 ~~-----~-~~~~~~l~~~g~~v~~g~  239 (325)
                      ..     + ...+..|++++.++.++.
T Consensus       230 t~~t~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          230 LPSTTGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             CTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred             CHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            32     2 356788999999998875

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=96.39  E-value=0.0037  Score=54.49  Aligned_cols=77  Identities=10%  Similarity=0.021  Sum_probs=49.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc--C-CCEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--G-ADVCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~--g-~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      +.+|||+|++|.+|..+++.+...|++|++++++..+...+. .+  + .-..+..+-.+ ...+.+...+..+|+||.+
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~vih~   87 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD-QNKLLESIREFQPEIVFHM   87 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC-HHHHHHHHHHHCCSEEEEC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccC-HHHHHHHHHhcCCCEEEEC
Confidence            578999999999999999999999999999998765433222 11  1 11233222211 1222222221148999999


Q ss_pred             CC
Q 020487          216 MG  217 (325)
Q Consensus       216 ~g  217 (325)
                      ++
T Consensus        88 A~   89 (357)
T 1rkx_A           88 AA   89 (357)
T ss_dssp             CS
T ss_pred             CC
Confidence            87

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.39  E-value=0.0013  Score=54.58  Aligned_cols=98  Identities=20%  Similarity=0.145  Sum_probs=67.8

Q ss_pred             HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHHh
Q 020487          132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEET  204 (325)
Q Consensus       132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~  204 (325)
                      .....+.++.+||-+|+ | .|..+..+++..|.+|++++.++...+.+++    .|..   .+...+.....      .
T Consensus        29 ~~~~~~~~~~~VLDiGc-G-~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~------~  100 (256)
T 1nkv_A           29 GRVLRMKPGTRILDLGS-G-SGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV------A  100 (256)
T ss_dssp             HHHTCCCTTCEEEEETC-T-TCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC------C
T ss_pred             HHhcCCCCCCEEEEECC-C-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC------c
Confidence            35567889999999997 3 3888889998889999999999987776653    3321   22222222210      1


Q ss_pred             CCCcccEEEeCCC-------hHHHHHhhccccCCCEEEEEe
Q 020487          205 GGKGVDVILDCMG-------ASYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       205 ~~~~~d~vi~~~g-------~~~~~~~~~~l~~~g~~v~~g  238 (325)
                       ...||+|+....       ...+..+.+.|+|||+++...
T Consensus       101 -~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          101 -NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             -SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             -CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence             347999986322       133678889999999998864

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.37  E-value=0.0062  Score=50.50  Aligned_cols=95  Identities=21%  Similarity=0.212  Sum_probs=63.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC-EEEeCCCchHHHHHHHHhCCCcccE
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      +.++++||-.|+ |. |..++.+++ .|++|++++.++...+.+++    .+.. .+...   +....    .....||+
T Consensus       118 ~~~~~~VLDiGc-G~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~---d~~~~----~~~~~fD~  187 (254)
T 2nxc_A          118 LRPGDKVLDLGT-GS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEG---SLEAA----LPFGPFDL  187 (254)
T ss_dssp             CCTTCEEEEETC-TT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEES---CHHHH----GGGCCEEE
T ss_pred             cCCCCEEEEecC-CC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEEC---Chhhc----CcCCCCCE
Confidence            578999999997 43 777777666 57799999999988776653    3332 22221   11111    22347999


Q ss_pred             EEeCCChH----HHHHhhccccCCCEEEEEeccC
Q 020487          212 ILDCMGAS----YFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       212 vi~~~g~~----~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      |+.+....    .+..+.+.|+|+|+++..+...
T Consensus       188 Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~~  221 (254)
T 2nxc_A          188 LVANLYAELHAALAPRYREALVPGGRALLTGILK  221 (254)
T ss_dssp             EEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEEG
T ss_pred             EEECCcHHHHHHHHHHHHHHcCCCCEEEEEeecc
Confidence            99765432    3566778899999999876543

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.37  E-value=0.0095  Score=47.03  Aligned_cols=98  Identities=14%  Similarity=0.131  Sum_probs=65.7

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHHH----cCC-C--EEEeCCCchHHHHHHHHhC
Q 020487          135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGA-D--VCINYKTEDFVARVKEETG  205 (325)
Q Consensus       135 ~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~~----~g~-~--~~~~~~~~~~~~~~~~~~~  205 (325)
                      ..++++++||-.|+ | .|..+..+++..+  .+|++++.+++..+.+++    .+. .  .++..+...+.    . ..
T Consensus        18 ~~~~~~~~vLDlGc-G-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~-~~   90 (197)
T 3eey_A           18 MFVKEGDTVVDATC-G-NGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD----K-YI   90 (197)
T ss_dssp             HHCCTTCEEEESCC-T-TSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG----G-TC
T ss_pred             hcCCCCCEEEEcCC-C-CCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh----h-hc
Confidence            35688999999997 4 3788888888753  699999999987776653    332 1  23332222211    1 12


Q ss_pred             CCcccEEEeCCCh----------------HHHHHhhccccCCCEEEEEec
Q 020487          206 GKGVDVILDCMGA----------------SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       206 ~~~~d~vi~~~g~----------------~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ...||+|+...+-                ..+..+.+.|+++|+++....
T Consensus        91 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           91 DCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             CSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            2479999866532                346778889999999987753

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=96.36  E-value=0.013  Score=48.86  Aligned_cols=76  Identities=17%  Similarity=0.191  Sum_probs=49.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cChhhHHHH----HHcCCC-EEE--eCCCchH----HHHHHHHhCCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGAD-VCI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~-~~~~~~~~~----~~~g~~-~~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      +.+++|+|+++.+|..+++.+...|++|++.. ++.++.+..    ++.+.. .++  |-.+...    .+.+.+..+  
T Consensus        26 ~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g--  103 (267)
T 4iiu_A           26 SRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG--  103 (267)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC--
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC--
Confidence            67899999999999999999999999997755 555444332    233333 233  3233222    222333333  


Q ss_pred             cccEEEeCCC
Q 020487          208 GVDVILDCMG  217 (325)
Q Consensus       208 ~~d~vi~~~g  217 (325)
                      .+|++++++|
T Consensus       104 ~id~li~nAg  113 (267)
T 4iiu_A          104 AWYGVVSNAG  113 (267)
T ss_dssp             CCSEEEECCC
T ss_pred             CccEEEECCC
Confidence            6899999987

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.36  E-value=0.017  Score=48.10  Aligned_cols=85  Identities=21%  Similarity=0.228  Sum_probs=60.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      +.+++|+|+ |.+|.+++..+...|.+|+++.|+.++.+.+.+++. ......+.            ..+|+||+|++..
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~-~~~~~~~l------------~~~DiVInaTp~G  183 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGC-DCFMEPPK------------SAFDLIINATSAS  183 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTC-EEESSCCS------------SCCSEEEECCTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCC-eEecHHHh------------ccCCEEEEcccCC
Confidence            889999998 999999999999999999999999988766556664 23322221            1689999997642


Q ss_pred             -----HH--HHhhccccCCCEEEEEe
Q 020487          220 -----YF--QRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       220 -----~~--~~~~~~l~~~g~~v~~g  238 (325)
                           .+  ..+.+.++++..++++.
T Consensus       184 m~~~~~l~~~~l~~~l~~~~~v~D~v  209 (269)
T 3phh_A          184 LHNELPLNKEVLKGYFKEGKLAYDLA  209 (269)
T ss_dssp             CCCSCSSCHHHHHHHHHHCSEEEESC
T ss_pred             CCCCCCCChHHHHhhCCCCCEEEEeC
Confidence                 11  11122566777777763

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.36  E-value=0.032  Score=47.69  Aligned_cols=93  Identities=10%  Similarity=0.095  Sum_probs=59.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC---hhhHHHHH-H----cCCC-EEEeCCCchHHHHHHHHhCCCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGS---EEKLAVCK-D----LGAD-VCINYKTEDFVARVKEETGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~---~~~~~~~~-~----~g~~-~~~~~~~~~~~~~~~~~~~~~~  208 (325)
                      .+.+++|+|+ |++|.+++..+...|+ +|+++.|+   .++.+.+. +    .+.. ...+..+.   +.+.+...  .
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~---~~l~~~l~--~  226 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDH---EQLRKEIA--E  226 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH---HHHHHHHH--T
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchH---HHHHhhhc--C
Confidence            5789999998 8999999999999999 89999999   55554432 2    2221 23333321   22233222  5


Q ss_pred             ccEEEeCCChHHH------HH-hhccccCCCEEEEE
Q 020487          209 VDVILDCMGASYF------QR-NLGSLNIDGRLFII  237 (325)
Q Consensus       209 ~d~vi~~~g~~~~------~~-~~~~l~~~g~~v~~  237 (325)
                      +|+||+|++....      .. ....++++..++++
T Consensus       227 aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~Dl  262 (315)
T 3tnl_A          227 SVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDV  262 (315)
T ss_dssp             CSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEES
T ss_pred             CCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEe
Confidence            8999999863211      11 23456666666665

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=96.35  E-value=0.022  Score=51.98  Aligned_cols=81  Identities=23%  Similarity=0.321  Sum_probs=52.6

Q ss_pred             CCC--CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhh-------HHHHHHcCCCEE-E--eCCCchHHHHHHHHh
Q 020487          138 SPG--ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-------LAVCKDLGADVC-I--NYKTEDFVARVKEET  204 (325)
Q Consensus       138 ~~~--~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~-------~~~~~~~g~~~~-~--~~~~~~~~~~~~~~~  204 (325)
                      +++  .++||+|++|.+|..+++.+...|+ +|+++.++...       .+.+++.|.... +  |-.+......+.+..
T Consensus       235 ~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i  314 (496)
T 3mje_A          235 RPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAEL  314 (496)
T ss_dssp             CCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            455  8999999999999999999988999 88888876321       233445665432 2  222322223333222


Q ss_pred             -CCCcccEEEeCCCh
Q 020487          205 -GGKGVDVILDCMGA  218 (325)
Q Consensus       205 -~~~~~d~vi~~~g~  218 (325)
                       ...++|++|++.|.
T Consensus       315 ~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          315 PEDAPLTAVFHSAGV  329 (496)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HHhCCCeEEEECCcc
Confidence             22368999999874

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=96.35  E-value=0.015  Score=53.04  Aligned_cols=81  Identities=17%  Similarity=0.272  Sum_probs=53.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhh---H----HHHHHcCCCE-EEeCC--CchHHHHHHHHh-
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK---L----AVCKDLGADV-CINYK--TEDFVARVKEET-  204 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~---~----~~~~~~g~~~-~~~~~--~~~~~~~~~~~~-  204 (325)
                      ++++.++||+|++|.+|..+++.+...|+ +|+++.++...   .    +.++..|... ++..+  +......+.+.. 
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~  302 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG  302 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence            56789999999999999999998888899 59999987642   1    2334456532 22222  222222222222 


Q ss_pred             CCCcccEEEeCCC
Q 020487          205 GGKGVDVILDCMG  217 (325)
Q Consensus       205 ~~~~~d~vi~~~g  217 (325)
                      ....+|.||.+.|
T Consensus       303 ~~g~ld~VIh~AG  315 (486)
T 2fr1_A          303 DDVPLSAVFHAAA  315 (486)
T ss_dssp             TTSCEEEEEECCC
T ss_pred             hcCCCcEEEECCc
Confidence            1236899999987

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.33  E-value=0.02  Score=48.91  Aligned_cols=101  Identities=16%  Similarity=0.072  Sum_probs=68.8

Q ss_pred             hhcC-CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHHh
Q 020487          133 MTSH-LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEET  204 (325)
Q Consensus       133 ~~~~-~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~  204 (325)
                      +... ++++++||-+|+ | .|..+..+++..|++|+.++.+++..+.+++    .+..   .++..+.....      .
T Consensus       110 ~~l~~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~  181 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAGC-G-RGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP------F  181 (312)
T ss_dssp             TTSCCCCTTCEEEEESC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC------C
T ss_pred             HHhccCCCCCEEEEecC-C-CCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC------C
Confidence            4444 789999999997 3 4888888888778999999999988776653    3322   22322222110      1


Q ss_pred             CCCcccEEEeCCC------hHHHHHhhccccCCCEEEEEeccC
Q 020487          205 GGKGVDVILDCMG------ASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       205 ~~~~~d~vi~~~g------~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      ....||+|+....      ...+..+.+.|+|||+++......
T Consensus       182 ~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~  224 (312)
T 3vc1_A          182 DKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCW  224 (312)
T ss_dssp             CTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred             CCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccc
Confidence            2347999986432      234678889999999999875433

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=96.32  E-value=0.012  Score=50.88  Aligned_cols=74  Identities=16%  Similarity=0.231  Sum_probs=50.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .+|||+|++|.+|..+++.+...|++|++++++..+.+.+...+.. ++..+-.+ .+.+.+...  ++|+||.+++.
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~-~~~~Dl~d-~~~~~~~~~--~~d~vih~a~~   87 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPE-CRVAEMLD-HAGLERALR--GLDGVIFSAGY   87 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCE-EEECCTTC-HHHHHHHTT--TCSEEEEC---
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeE-EEEecCCC-HHHHHHHHc--CCCEEEECCcc
Confidence            4799999999999999999999999999999887654433322332 33222222 234455553  68999999873

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=96.32  E-value=0.0058  Score=52.85  Aligned_cols=74  Identities=11%  Similarity=0.024  Sum_probs=47.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +|||+|++|.+|..+++.+... |++|++++++..+.+.+.....-.++..+-.+....+.+...  ++|+||.|++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~~d~vih~A~   76 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK--KCDVVLPLVA   76 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH--HCSEEEECBC
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc--CCCEEEEccc
Confidence            6999999999999999999887 899999998876543322111112232221111112222222  5899999876

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.32  E-value=0.012  Score=51.30  Aligned_cols=76  Identities=11%  Similarity=0.071  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH--CCCEEEEEecChhhHH-------------HHHHcCCCEEEeCCCchHHHHHHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKC--QGVRVFVTAGSEEKLA-------------VCKDLGADVCINYKTEDFVARVKEE  203 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~--~g~~v~~~~~~~~~~~-------------~~~~~g~~~~~~~~~~~~~~~~~~~  203 (325)
                      .+.+|||+|++|.+|..+++.+..  .|++|++++++.....             .....+. ..+..+-.+ .+.+.+.
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d-~~~~~~~   86 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKG-EVIAADINN-PLDLRRL   86 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCS-EEEECCTTC-HHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCc-eEEECCCCC-HHHHHHh
Confidence            468999999999999999999988  8999999998654111             0111111 233222222 2334444


Q ss_pred             hCCCcccEEEeCCC
Q 020487          204 TGGKGVDVILDCMG  217 (325)
Q Consensus       204 ~~~~~~d~vi~~~g  217 (325)
                       ...++|+||.|++
T Consensus        87 -~~~~~D~vih~A~   99 (362)
T 3sxp_A           87 -EKLHFDYLFHQAA   99 (362)
T ss_dssp             -TTSCCSEEEECCC
T ss_pred             -hccCCCEEEECCc
Confidence             2247999999987

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=96.30  E-value=0.012  Score=54.18  Aligned_cols=83  Identities=17%  Similarity=0.187  Sum_probs=52.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEE-ecCh-------------h----hHHHHHHcCCCEE-EeC--CC
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVT-AGSE-------------E----KLAVCKDLGADVC-INY--KT  193 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~-~~~~-------------~----~~~~~~~~g~~~~-~~~--~~  193 (325)
                      .++++.++||+|++|++|..+++.+...|++ |+.+ .++.             +    ..+.+++.|.... +..  .+
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd  326 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD  326 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC
Confidence            3567899999999999999999988888996 6666 6663             1    1233444565432 222  23


Q ss_pred             chHHHHHHHHh-CCCcccEEEeCCCh
Q 020487          194 EDFVARVKEET-GGKGVDVILDCMGA  218 (325)
Q Consensus       194 ~~~~~~~~~~~-~~~~~d~vi~~~g~  218 (325)
                      ......+.+.. ...++|.+|.+.|.
T Consensus       327 ~~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          327 AEAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             HHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHhcCCCcEEEECCcC
Confidence            22222332222 22368999999873

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=96.29  E-value=0.017  Score=48.14  Aligned_cols=77  Identities=13%  Similarity=0.177  Sum_probs=57.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      .|.+++|+|++..+|..+++++...  |++|++..+..                   .+    +.+.+.  .+|++|.++
T Consensus       157 ~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t-------------------~~----L~~~~~--~ADIVI~Av  211 (281)
T 2c2x_A          157 AGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT-------------------RD----LPALTR--QADIVVAAV  211 (281)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC-------------------SC----HHHHHT--TCSEEEECS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch-------------------hH----HHHHHh--hCCEEEECC
Confidence            6889999999667899999999999  89999875332                   12    223332  689999999


Q ss_pred             ChHHHHHhhccccCCCEEEEEeccC
Q 020487          217 GASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       217 g~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      |.+.+ ---++++++..++++|...
T Consensus       212 g~p~~-I~~~~vk~GavVIDVgi~r  235 (281)
T 2c2x_A          212 GVAHL-LTADMVRPGAAVIDVGVSR  235 (281)
T ss_dssp             CCTTC-BCGGGSCTTCEEEECCEEE
T ss_pred             CCCcc-cCHHHcCCCcEEEEccCCC
Confidence            98764 2245688998999888654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=96.28  E-value=0.014  Score=50.58  Aligned_cols=78  Identities=17%  Similarity=0.142  Sum_probs=48.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh----------hHHHHHH-cCC-CEEEeCCCchHHHHHHHHhCCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE----------KLAVCKD-LGA-DVCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~----------~~~~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      +.+|||+|++|.+|..+++.+...|++|++++++..          ..+.+++ .+. -..+..+-.+ .+.+.+.....
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILD-QGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTC-HHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCC-HHHHHHHHHhc
Confidence            368999999999999999999888999999986432          2333332 122 1233222222 12233322212


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|+||.+++.
T Consensus        81 ~~d~vih~A~~   91 (348)
T 1ek6_A           81 SFMAVIHFAGL   91 (348)
T ss_dssp             CEEEEEECCSC
T ss_pred             CCCEEEECCCC
Confidence            68999999873

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=96.28  E-value=0.0086  Score=56.37  Aligned_cols=78  Identities=22%  Similarity=0.314  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec---------ChhhHH----HHHHcCCCEEEeCCCchHHHHHH----
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG---------SEEKLA----VCKDLGADVCINYKTEDFVARVK----  201 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~---------~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~----  201 (325)
                      .|++++|+|+++++|.+++..+...|++|+++++         +.++.+    .++..+...+.|..+......+.    
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~   97 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI   97 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence            4789999999999999999999999999999876         433332    23345555555555433222222    


Q ss_pred             HHhCCCcccEEEeCCCh
Q 020487          202 EETGGKGVDVILDCMGA  218 (325)
Q Consensus       202 ~~~~~~~~d~vi~~~g~  218 (325)
                      +..+  .+|++|+++|.
T Consensus        98 ~~~g--~iDiLVnnAGi  112 (613)
T 3oml_A           98 KAFG--RVDILVNNAGI  112 (613)
T ss_dssp             ---------CEECCCCC
T ss_pred             HHCC--CCcEEEECCCC
Confidence            2222  68999999873

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=96.27  E-value=0.0073  Score=48.87  Aligned_cols=75  Identities=15%  Similarity=0.228  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCC-chHHHHHH
Q 020487          139 PGESFLVHGG----------------SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVK  201 (325)
Q Consensus       139 ~~~~vli~g~----------------~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~  201 (325)
                      .|.++||+|+                +|.+|.++++.+...|++|+++.++.. .+.  ..|. .+++-.. ....+.+.
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~--~~g~-~~~dv~~~~~~~~~v~   82 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPT--PPFV-KRVDVMTALEMEAAVN   82 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCC--CTTE-EEEECCSHHHHHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-ccc--CCCC-eEEccCcHHHHHHHHH
Confidence            4789999999                589999999999999999999876542 110  1122 2333332 22334444


Q ss_pred             HHhCCCcccEEEeCCChH
Q 020487          202 EETGGKGVDVILDCMGAS  219 (325)
Q Consensus       202 ~~~~~~~~d~vi~~~g~~  219 (325)
                      +..+  .+|+++.++|..
T Consensus        83 ~~~~--~~Dili~~Aav~   98 (226)
T 1u7z_A           83 ASVQ--QQNIFIGCAAVA   98 (226)
T ss_dssp             HHGG--GCSEEEECCBCC
T ss_pred             HhcC--CCCEEEECCccc
Confidence            4454  689999998853

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=96.26  E-value=0.0028  Score=54.83  Aligned_cols=35  Identities=11%  Similarity=0.073  Sum_probs=30.4

Q ss_pred             CCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecCh
Q 020487          140 GESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       140 ~~~vli~g~~g--~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      +++++|+|+++  ++|.++++.+...|++|+++++++
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~   38 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence            57899999864  899999999999999999887654

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.26  E-value=0.044  Score=45.86  Aligned_cols=86  Identities=9%  Similarity=-0.025  Sum_probs=61.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC-EEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMGASY  220 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~  220 (325)
                      +|.|+|+ |.+|.+.+..+...|.+|++.++++++.+.+.+.|.. .... +.       .+.   ..+|+|+-|+....
T Consensus         2 ~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~-~~-------~~~---~~~D~vi~av~~~~   69 (279)
T 2f1k_A            2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQ-DL-------SLL---QTAKIIFLCTPIQL   69 (279)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEES-CG-------GGG---TTCSEEEECSCHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccC-CH-------HHh---CCCCEEEEECCHHH
Confidence            6889997 9999999999988899999999999888887777753 2221 11       111   26899999999765


Q ss_pred             HHH----hhccccCCCEEEEEec
Q 020487          221 FQR----NLGSLNIDGRLFIIGT  239 (325)
Q Consensus       221 ~~~----~~~~l~~~g~~v~~g~  239 (325)
                      ...    +...++++..++.+++
T Consensus        70 ~~~~~~~l~~~~~~~~~vv~~~~   92 (279)
T 2f1k_A           70 ILPTLEKLIPHLSPTAIVTDVAS   92 (279)
T ss_dssp             HHHHHHHHGGGSCTTCEEEECCS
T ss_pred             HHHHHHHHHhhCCCCCEEEECCC
Confidence            433    3345666666666533

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=96.26  E-value=0.0044  Score=50.32  Aligned_cols=76  Identities=13%  Similarity=0.193  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCC-chHHHHHH
Q 020487          139 PGESFLVHGG----------------SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVK  201 (325)
Q Consensus       139 ~~~~vli~g~----------------~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~  201 (325)
                      .|.++||+|+                +|.+|.++++.+...|++|+.+.++...... ...+. .+++... ......+.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~-~~~~~-~~~~v~s~~em~~~v~   79 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE-PHPNL-SIREITNTKDLLIEMQ   79 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC-CCTTE-EEEECCSHHHHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-CCCCe-EEEEHhHHHHHHHHHH
Confidence            5789999999                7899999999999999999999976532110 00122 2333332 33344555


Q ss_pred             HHhCCCcccEEEeCCCh
Q 020487          202 EETGGKGVDVILDCMGA  218 (325)
Q Consensus       202 ~~~~~~~~d~vi~~~g~  218 (325)
                      +..+  ++|+++.+++.
T Consensus        80 ~~~~--~~Dili~aAAv   94 (232)
T 2gk4_A           80 ERVQ--DYQVLIHSMAV   94 (232)
T ss_dssp             HHGG--GCSEEEECSBC
T ss_pred             HhcC--CCCEEEEcCcc
Confidence            5554  68999999874

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=96.25  E-value=0.016  Score=47.73  Aligned_cols=104  Identities=23%  Similarity=0.357  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecChhhHHHH----HHcCCCE-EE--eCCCchH----HHHHHHH---
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVC----KDLGADV-CI--NYKTEDF----VARVKEE---  203 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~-~~~~~~~~~~----~~~g~~~-~~--~~~~~~~----~~~~~~~---  203 (325)
                      .+.+++|+|+++.+|.++++.+...|++|+++ .++.++.+..    +..+... .+  |-.+...    .+.+.+.   
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            47899999999999999999999999999886 4554444332    2333322 22  2222221    1222222   


Q ss_pred             -hCCCcccEEEeCCChH-----------H---------------HHHhhccccCCCEEEEEeccCC
Q 020487          204 -TGGKGVDVILDCMGAS-----------Y---------------FQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       204 -~~~~~~d~vi~~~g~~-----------~---------------~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                       .+...+|+++++.|..           .               +..++..++++|+++.+++...
T Consensus        86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~  151 (255)
T 3icc_A           86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  151 (255)
T ss_dssp             HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhh
Confidence             1223599999998731           0               1233445667889999876543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=96.24  E-value=0.016  Score=49.00  Aligned_cols=75  Identities=16%  Similarity=0.148  Sum_probs=52.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhH--HHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKL--AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      ..+|+|+|++|.+|..+++.+...| ++|++++++..+.  ..+...+.. ++..+-.+ .+.+.+...  ++|.||.+.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~-~~~~D~~d-~~~l~~~~~--~~d~vi~~a   80 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAE-VVQGDQDD-QVIMELALN--GAYATFIVT   80 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCE-EEECCTTC-HHHHHHHHT--TCSEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCE-EEEecCCC-HHHHHHHHh--cCCEEEEeC
Confidence            4689999999999999999888878 8999999987654  233344543 33222222 334455554  589999998


Q ss_pred             Ch
Q 020487          217 GA  218 (325)
Q Consensus       217 g~  218 (325)
                      +.
T Consensus        81 ~~   82 (299)
T 2wm3_A           81 NY   82 (299)
T ss_dssp             CH
T ss_pred             CC
Confidence            74

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.24  E-value=0.013  Score=50.69  Aligned_cols=69  Identities=16%  Similarity=0.185  Sum_probs=47.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEE-eCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      .++.+|||+|++|.+|..+++.+...|++|++++++..+      .+...+. |..+   ...+.+...  ++|+||.++
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d---~~~~~~~~~--~~d~vih~A   85 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLED---GQALSDAIM--GVSAVLHLG   85 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTC---HHHHHHHHT--TCSEEEECC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCC---HHHHHHHHh--CCCEEEECC
Confidence            356789999999999999999999999999999988655      2333222 2222   233444443  689999987


Q ss_pred             C
Q 020487          217 G  217 (325)
Q Consensus       217 g  217 (325)
                      +
T Consensus        86 ~   86 (347)
T 4id9_A           86 A   86 (347)
T ss_dssp             C
T ss_pred             c
Confidence            6

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.23  E-value=0.0083  Score=49.52  Aligned_cols=97  Identities=13%  Similarity=0.089  Sum_probs=64.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHHhCCC
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      ..++.+||-+|+ | .|..+..+++..  +.+|+.++.+++..+.+++    .|..   .++..+   ..+.+.......
T Consensus        61 ~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d---~~~~l~~~~~~~  135 (248)
T 3tfw_A           61 LTQAKRILEIGT-L-GGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGP---ALQSLESLGECP  135 (248)
T ss_dssp             HHTCSEEEEECC-T-TSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESC---HHHHHHTCCSCC
T ss_pred             hcCCCEEEEecC-C-chHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC---HHHHHHhcCCCC
Confidence            457889999997 3 488888999887  5799999999988776653    3433   222222   122222222234


Q ss_pred             cccEEEeCCCh----HHHHHhhccccCCCEEEEEe
Q 020487          208 GVDVILDCMGA----SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       208 ~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~g  238 (325)
                      .||+|+-....    ..+..+.+.|+|||.++.-.
T Consensus       136 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~  170 (248)
T 3tfw_A          136 AFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDN  170 (248)
T ss_dssp             CCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             CeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence            79999854433    23677789999999888753

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.22  E-value=0.0019  Score=52.99  Aligned_cols=99  Identities=14%  Similarity=0.151  Sum_probs=61.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +.+++|+|++|.+|..+++.+...|+  +|+++++++++.+.....+. ..+..+-.+ .+.+.+...  ++|++|+|+|
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~d-~~~~~~~~~--~~d~vi~~ag   93 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNV-NQEVVDFEK-LDDYASAFQ--GHDVGFCCLG   93 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGC-EEEECCGGG-GGGGGGGGS--SCSEEEECCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCc-eEEecCcCC-HHHHHHHhc--CCCEEEECCC
Confidence            67899999999999999999988899  99999988754332111122 222222111 112233332  6899999998


Q ss_pred             hHH---------------HHHhhccccC--CCEEEEEeccCC
Q 020487          218 ASY---------------FQRNLGSLNI--DGRLFIIGTQGG  242 (325)
Q Consensus       218 ~~~---------------~~~~~~~l~~--~g~~v~~g~~~~  242 (325)
                      ...               ...+++.+..  .+++|.++....
T Consensus        94 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~  135 (242)
T 2bka_A           94 TTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA  135 (242)
T ss_dssp             CCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             cccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC
Confidence            421               1223333332  368988876543

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=96.22  E-value=0.011  Score=51.74  Aligned_cols=36  Identities=14%  Similarity=0.147  Sum_probs=30.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK  176 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~  176 (325)
                      .+|||+|++|.+|..+++.+...|++|++++++..+
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASS   37 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            579999999999999999998899999999987653

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=96.21  E-value=0.0045  Score=53.45  Aligned_cols=78  Identities=21%  Similarity=0.224  Sum_probs=49.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH----HHHHHc------CCC-EEE--eCCCchHHHHHHHHhCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL----AVCKDL------GAD-VCI--NYKTEDFVARVKEETGG  206 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~----~~~~~~------g~~-~~~--~~~~~~~~~~~~~~~~~  206 (325)
                      +.+++|+|++|.+|.+++..+...|++|+++.++..+.    +..+..      +.. ..+  |-.+......+.+....
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            56899999999999999999999999988876544322    222222      122 222  33333333333332223


Q ss_pred             CcccEEEeCCC
Q 020487          207 KGVDVILDCMG  217 (325)
Q Consensus       207 ~~~d~vi~~~g  217 (325)
                      ..+|++|++.|
T Consensus        82 g~iD~lVnnAG   92 (327)
T 1jtv_A           82 GRVDVLVCNAG   92 (327)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            46999999986

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.21  E-value=0.027  Score=49.38  Aligned_cols=92  Identities=12%  Similarity=0.179  Sum_probs=65.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  220 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~  220 (325)
                      .+|+|+|+ |.+|..+++.+.. ..+|.+++++.++.+.+++......+|.++   .+.+.+...  +.|+|++|++...
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d---~~~l~~~~~--~~DvVi~~~p~~~   89 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASN---FDKLVEVMK--EFELVIGALPGFL   89 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTC---HHHHHHHHT--TCSEEEECCCGGG
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCC---HHHHHHHHh--CCCEEEEecCCcc
Confidence            47999998 9999999888754 578999999998888776554323334333   334555554  6899999998754


Q ss_pred             -HHHhhccccCCCEEEEEec
Q 020487          221 -FQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       221 -~~~~~~~l~~~g~~v~~g~  239 (325)
                       ...+-.|+..+-.++++..
T Consensus        90 ~~~v~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           90 GFKSIKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             HHHHHHHHHHHTCEEEECCC
T ss_pred             cchHHHHHHhcCcceEeeec
Confidence             3444567788888888753

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.21  E-value=0.0045  Score=48.42  Aligned_cols=97  Identities=12%  Similarity=0.132  Sum_probs=65.8

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCC-C--EEEeCCCchHHHHHHHHhC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA-D--VCINYKTEDFVARVKEETG  205 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~-~--~~~~~~~~~~~~~~~~~~~  205 (325)
                      ....+.++.+||-.|+ |. |..+..+++.. .+|++++.++...+.+++    .+. .  .++..   +....   ...
T Consensus        27 ~~~~~~~~~~vldiG~-G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~~---~~~   97 (192)
T 1l3i_A           27 CLAEPGKNDVAVDVGC-GT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG---DAPEA---LCK   97 (192)
T ss_dssp             HHHCCCTTCEEEEESC-TT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES---CHHHH---HTT
T ss_pred             HhcCCCCCCEEEEECC-CC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEec---CHHHh---ccc
Confidence            4456788999999997 44 88888888776 899999999887776653    333 1  22222   11111   111


Q ss_pred             CCcccEEEeCCC----hHHHHHhhccccCCCEEEEEe
Q 020487          206 GKGVDVILDCMG----ASYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       206 ~~~~d~vi~~~g----~~~~~~~~~~l~~~g~~v~~g  238 (325)
                      ...+|+|+....    ...+..+.+.|+++|+++...
T Consensus        98 ~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A           98 IPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            137999997654    234577788999999998764

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=96.21  E-value=0.0048  Score=53.20  Aligned_cols=76  Identities=13%  Similarity=0.140  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHH-HHHcCCCEEE--eCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV-CKDLGADVCI--NYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~-~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .+.+|||+|++|.+|..+++.+...|++|++++++...... .+.+..-..+  |..+......+.+..   ++|+||.|
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~---~~D~vih~   95 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF---KPTHVVHS   95 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH---CCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc---CCCEEEEC
Confidence            46789999999999999999999899999999986443211 1112111223  222222222222211   68999999


Q ss_pred             CC
Q 020487          216 MG  217 (325)
Q Consensus       216 ~g  217 (325)
                      ++
T Consensus        96 A~   97 (330)
T 2pzm_A           96 AA   97 (330)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=96.20  E-value=0.0055  Score=52.93  Aligned_cols=78  Identities=15%  Similarity=0.096  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH-HHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .+.+|||+|++|.+|..+++.+...|++|++++++.... +.+..+..-.++..+-.+ .+.+.+...+..+|+||.+++
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~D~vih~A~   98 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIAD-HALVNQLIGDLQPDAVVHTAA   98 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTC-HHHHHHHHHHHCCSEEEECCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCC-HHHHHHHHhccCCcEEEECce
Confidence            357899999999999999999988999999999875422 111111111223222221 122333222124899999987

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.20  E-value=0.026  Score=48.25  Aligned_cols=92  Identities=15%  Similarity=0.288  Sum_probs=59.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh------hhHHHH---HHcCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE------EKLAVC---KDLGADVCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~------~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      ..+|+|+|++|.+|..+++.+...|.+|++++++.      ++.+.+   ...+.. ++..+-.+ .+.+.+...  ++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~-~v~~D~~d-~~~l~~a~~--~~d   79 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVT-IIEGEMEE-HEKMVSVLK--QVD   79 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCE-EEECCTTC-HHHHHHHHT--TCS
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcE-EEEecCCC-HHHHHHHHc--CCC
Confidence            35799999999999999999998999999999875      233322   233443 33222222 334555554  589


Q ss_pred             EEEeCCChHH---HHHhhccccC-C--CEEE
Q 020487          211 VILDCMGASY---FQRNLGSLNI-D--GRLF  235 (325)
Q Consensus       211 ~vi~~~g~~~---~~~~~~~l~~-~--g~~v  235 (325)
                      +||.+++...   ...+++.+.. +  .++|
T Consensus        80 ~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           80 IVISALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             EEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             EEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence            9999998532   2333444433 2  4676

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.19  E-value=0.078  Score=44.56  Aligned_cols=92  Identities=11%  Similarity=0.123  Sum_probs=59.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-HcC----CCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLG----ADVCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      .+.+++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+. +++    ...+.........+.+.      .+|+|
T Consensus       126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~------~~DiV  198 (283)
T 3jyo_A          126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIA------AADGV  198 (283)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHH------HSSEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHh------cCCEE
Confidence            5789999998 9999999999999999 7999999988776442 322    11121112122222221      58999


Q ss_pred             EeCCChHHH-----HHhhccccCCCEEEEE
Q 020487          213 LDCMGASYF-----QRNLGSLNIDGRLFII  237 (325)
Q Consensus       213 i~~~g~~~~-----~~~~~~l~~~g~~v~~  237 (325)
                      |+|++....     ....+.++++..++++
T Consensus       199 InaTp~Gm~~~~~~pi~~~~l~~~~~v~Dl  228 (283)
T 3jyo_A          199 VNATPMGMPAHPGTAFDVSCLTKDHWVGDV  228 (283)
T ss_dssp             EECSSTTSTTSCSCSSCGGGCCTTCEEEEC
T ss_pred             EECCCCCCCCCCCCCCCHHHhCCCCEEEEe
Confidence            999863211     1123456677666665

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.18  E-value=0.038  Score=44.62  Aligned_cols=99  Identities=19%  Similarity=0.085  Sum_probs=66.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCC------CEEEEEecChhhHHHHHH----cC-----CC--EEEeCCCch-HH
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQG------VRVFVTAGSEEKLAVCKD----LG-----AD--VCINYKTED-FV  197 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g------~~v~~~~~~~~~~~~~~~----~g-----~~--~~~~~~~~~-~~  197 (325)
                      .++++++||-+|+ |. |..+..+++..+      .+|+.++.+++..+.+++    .+     ..  .++..+... +.
T Consensus        77 ~~~~~~~VLdiG~-G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~  154 (227)
T 2pbf_A           77 VLKPGSRAIDVGS-GS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNE  154 (227)
T ss_dssp             TSCTTCEEEEESC-TT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCH
T ss_pred             hCCCCCEEEEECC-CC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccc
Confidence            5788999999997 44 888888888876      599999999887776653    23     11  233222221 10


Q ss_pred             HHHHHHhCCCcccEEEeCCChHH-HHHhhccccCCCEEEEEec
Q 020487          198 ARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       198 ~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~  239 (325)
                      .....   ...||+|+....... +..+.+.|+++|+++..-.
T Consensus       155 ~~~~~---~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~  194 (227)
T 2pbf_A          155 EEKKE---LGLFDAIHVGASASELPEILVDLLAENGKLIIPIE  194 (227)
T ss_dssp             HHHHH---HCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred             ccCcc---CCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence            00011   236999988766543 4677889999999987744

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.17  E-value=0.034  Score=46.85  Aligned_cols=86  Identities=16%  Similarity=0.082  Sum_probs=59.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh-H
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-S  219 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~  219 (325)
                      .+|.|+|. |.+|...++.+...|.+|++.++++++.+.+.+.|....     .+..+.+ +     ..|+||.|+.. .
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~~~~~~-~-----~aDvvi~~vp~~~   69 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERA-----ATPCEVV-E-----SCPVTFAMLADPA   69 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEEC-----SSHHHHH-H-----HCSEEEECCSSHH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeec-----CCHHHHH-h-----cCCEEEEEcCCHH
Confidence            47899998 999999999999999999999999998888877665221     1111111 1     46888888884 3


Q ss_pred             HHHHhh-------ccccCCCEEEEEe
Q 020487          220 YFQRNL-------GSLNIDGRLFIIG  238 (325)
Q Consensus       220 ~~~~~~-------~~l~~~g~~v~~g  238 (325)
                      .+...+       ..++++..++.++
T Consensus        70 ~~~~v~~~~~~l~~~l~~~~~vi~~s   95 (287)
T 3pef_A           70 AAEEVCFGKHGVLEGIGEGRGYVDMS   95 (287)
T ss_dssp             HHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             HHHHHHcCcchHhhcCCCCCEEEeCC
Confidence            444333       4456666666553

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=96.16  E-value=0.03  Score=48.58  Aligned_cols=75  Identities=15%  Similarity=0.125  Sum_probs=50.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh----hHHHHH-Hc-----CCCEEEeCCCchHHHHHHHHhCCCcc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE----KLAVCK-DL-----GADVCINYKTEDFVARVKEETGGKGV  209 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~----~~~~~~-~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~  209 (325)
                      +.+|||+|++|.+|..+++.+...|++|++++++..    +.+.+. .+     ..-.++..+-.+ .+.+.+...  ++
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~--~~  103 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRN-LDDCNNACA--GV  103 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTS-HHHHHHHHT--TC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCC-HHHHHHHhc--CC
Confidence            578999999999999999999989999999998653    222222 11     111233222222 234444443  69


Q ss_pred             cEEEeCCC
Q 020487          210 DVILDCMG  217 (325)
Q Consensus       210 d~vi~~~g  217 (325)
                      |+||.|++
T Consensus       104 d~vih~A~  111 (352)
T 1sb8_A          104 DYVLHQAA  111 (352)
T ss_dssp             SEEEECCS
T ss_pred             CEEEECCc
Confidence            99999987

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=96.14  E-value=0.02  Score=48.61  Aligned_cols=76  Identities=22%  Similarity=0.321  Sum_probs=51.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh------hhHHHHH---HcCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE------EKLAVCK---DLGADVCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~------~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      ..+|+|+|++|.+|..+++.+...|.+|++++|+.      ++.+.++   ..+.. ++..+-.+ .+.+.+...  ++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~d-~~~l~~~~~--~~d   79 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGAN-IVHGSIDD-HASLVEAVK--NVD   79 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCE-EECCCTTC-HHHHHHHHH--TCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCE-EEEeccCC-HHHHHHHHc--CCC
Confidence            35799999999999999999999999999999873      2333232   23433 33222222 233444443  589


Q ss_pred             EEEeCCChH
Q 020487          211 VILDCMGAS  219 (325)
Q Consensus       211 ~vi~~~g~~  219 (325)
                      +||.+++..
T Consensus        80 ~vi~~a~~~   88 (308)
T 1qyc_A           80 VVISTVGSL   88 (308)
T ss_dssp             EEEECCCGG
T ss_pred             EEEECCcch
Confidence            999999853

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.13  E-value=0.051  Score=45.74  Aligned_cols=72  Identities=8%  Similarity=0.092  Sum_probs=51.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  220 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~  220 (325)
                      .+|.|+|++|.+|...+..+...|.+|++.++++++.+.+.+.|... .  +..       +..  ..+|+||.|+....
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~-~--~~~-------~~~--~~aDvVi~av~~~~   79 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPL-T--DGD-------GWI--DEADVVVLALPDNI   79 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCC-C--CSS-------GGG--GTCSEEEECSCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCc-C--CHH-------HHh--cCCCEEEEcCCchH
Confidence            47999998899999999999999999999999988887777666321 1  110       011  14678888777654


Q ss_pred             HHHh
Q 020487          221 FQRN  224 (325)
Q Consensus       221 ~~~~  224 (325)
                      +...
T Consensus        80 ~~~v   83 (286)
T 3c24_A           80 IEKV   83 (286)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4333

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=96.10  E-value=0.026  Score=48.24  Aligned_cols=74  Identities=20%  Similarity=0.326  Sum_probs=52.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh-hHHHH---HHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVC---KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~-~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      .+|+|+|++|.+|..+++.+...|.+|++++++.. +.+.+   ...+.. ++..+-.+ .+.+.+...  ++|+||.++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~-~v~~Dl~d-~~~l~~a~~--~~d~vi~~a   87 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAI-IVKGELDE-HEKLVELMK--KVDVVISAL   87 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCE-EEECCTTC-HHHHHHHHT--TCSEEEECC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCE-EEEecCCC-HHHHHHHHc--CCCEEEECC
Confidence            47999999999999999999999999999998874 33322   334543 33222222 334555554  599999998


Q ss_pred             Ch
Q 020487          217 GA  218 (325)
Q Consensus       217 g~  218 (325)
                      +.
T Consensus        88 ~~   89 (318)
T 2r6j_A           88 AF   89 (318)
T ss_dssp             CG
T ss_pred             ch
Confidence            85

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=96.10  E-value=0.028  Score=48.51  Aligned_cols=77  Identities=17%  Similarity=0.175  Sum_probs=47.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh--hh---HHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE--EK---LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~--~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .+|||+|++|.+|..+++.+...|++|+++++..  ..   ...+...+.-..+..+-.+ ...+.+...+..+|+||.+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~vih~   80 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN-KNDVTRLITKYMPDSCFHL   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHCCSEEEEC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCC-HHHHHHHHhccCCCEEEEC
Confidence            3699999999999999999999999999998642  11   1222222322333222211 1222332221248999999


Q ss_pred             CCh
Q 020487          216 MGA  218 (325)
Q Consensus       216 ~g~  218 (325)
                      ++.
T Consensus        81 A~~   83 (347)
T 1orr_A           81 AGQ   83 (347)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            873

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.06  E-value=0.048  Score=45.58  Aligned_cols=91  Identities=12%  Similarity=0.095  Sum_probs=60.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH-HHcCCC-EEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      ++.+++|+|+ |.+|.++++.+...|++|+++.++.++.+.+ ++++.. .+...+..    .+   .. ..+|++++|+
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~----~~---~~-~~~DivVn~t  188 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMD----EL---EG-HEFDLIINAT  188 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSG----GG---TT-CCCSEEEECC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHH----Hh---cc-CCCCEEEECC
Confidence            5789999998 8999999999999999999999998876544 344431 11111111    11   11 3799999999


Q ss_pred             ChHHHHH----hhccccCCCEEEEEe
Q 020487          217 GASYFQR----NLGSLNIDGRLFIIG  238 (325)
Q Consensus       217 g~~~~~~----~~~~l~~~g~~v~~g  238 (325)
                      +......    -.+.++++..++++.
T Consensus       189 ~~~~~~~~~~i~~~~l~~~~~v~D~~  214 (271)
T 1nyt_A          189 SSGISGDIPAIPSSLIHPGIYCYDMF  214 (271)
T ss_dssp             SCGGGTCCCCCCGGGCCTTCEEEESC
T ss_pred             CCCCCCCCCCCCHHHcCCCCEEEEec
Confidence            8644211    123456666667664

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.06  E-value=0.03  Score=46.78  Aligned_cols=88  Identities=15%  Similarity=0.166  Sum_probs=60.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-HcCC--CEEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGA--DVCINYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-~~g~--~~~~~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      .+.+++|+|+ |.+|.+++..+...|+ +|+++.|+.++.+.+. +++.  .......  +    +.    ...+|+||+
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~--~----l~----~~~~DivIn  187 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE--A----LE----GQSFDIVVN  187 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG--G----GT----TCCCSEEEE
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH--H----hc----ccCCCEEEE
Confidence            5789999998 8999999999999997 9999999998876543 4443  1222211  1    11    147999999


Q ss_pred             CCChHHHH----HhhccccCCCEEEEE
Q 020487          215 CMGASYFQ----RNLGSLNIDGRLFII  237 (325)
Q Consensus       215 ~~g~~~~~----~~~~~l~~~g~~v~~  237 (325)
                      |++.....    .-.+.++++..++++
T Consensus       188 aTp~gm~~~~~~i~~~~l~~~~~V~Dl  214 (272)
T 3pwz_A          188 ATSASLTADLPPLPADVLGEAALAYEL  214 (272)
T ss_dssp             CSSGGGGTCCCCCCGGGGTTCSEEEES
T ss_pred             CCCCCCCCCCCCCCHHHhCcCCEEEEe
Confidence            98753211    113456777777766

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=96.04  E-value=0.039  Score=48.64  Aligned_cols=36  Identities=19%  Similarity=0.176  Sum_probs=31.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-HCCCEEEEEecChhh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEK  176 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~-~~g~~v~~~~~~~~~  176 (325)
                      .+|||+|++|.+|..+++.+. ..|++|++++++...
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~   39 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGT   39 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcc
Confidence            579999999999999999888 899999999876543

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.03  E-value=0.011  Score=48.13  Aligned_cols=96  Identities=19%  Similarity=0.152  Sum_probs=64.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHHhC-C
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEETG-G  206 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~-~  206 (325)
                      ..++.+||-+|+ | .|..+..+++..  +.+|+.++.+++..+.+++    .|..   .++..   +..+.+.+... +
T Consensus        70 ~~~~~~vLdiG~-G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~---d~~~~l~~l~~~~  144 (232)
T 3cbg_A           70 LTGAKQVLEIGV-F-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLG---PALATLEQLTQGK  144 (232)
T ss_dssp             HHTCCEEEEECC-T-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES---CHHHHHHHHHTSS
T ss_pred             hcCCCEEEEecC-C-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc---CHHHHHHHHHhcC
Confidence            346789999996 3 788899999887  5699999999987776653    3432   12222   22222333322 1


Q ss_pred             --CcccEEEeCCCh----HHHHHhhccccCCCEEEEE
Q 020487          207 --KGVDVILDCMGA----SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       207 --~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~  237 (325)
                        ..||+|+-....    ..+..+.+.|+|||.++.-
T Consensus       145 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~  181 (232)
T 3cbg_A          145 PLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVID  181 (232)
T ss_dssp             SCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             CCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence              479999854432    2367778999999999875

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.03  E-value=0.028  Score=48.74  Aligned_cols=48  Identities=23%  Similarity=0.347  Sum_probs=39.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD  186 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~  186 (325)
                      -+|.++.|.|. |.+|..+++.++..|++|++.+.+..+.+..+++++.
T Consensus       173 L~GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~  220 (355)
T 1c1d_A          173 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHT  220 (355)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCE
Confidence            36899999997 9999999999999999999887776654555566654

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.03  E-value=0.0057  Score=49.83  Aligned_cols=100  Identities=16%  Similarity=0.093  Sum_probs=65.7

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHHHcCC--C--EEEeCCCchHHHHHHHHhCCC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGA--D--VCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~~g~--~--~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      ....++++++||-+|+ |. |..+..+++..| .+|++++.+++..+.+++...  .  ..+..+...... . .... .
T Consensus        68 ~~~~~~~~~~VLDlGc-G~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~-~~~~-~  142 (230)
T 1fbn_A           68 KVMPIKRDSKILYLGA-SA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQE-Y-ANIV-E  142 (230)
T ss_dssp             CCCCCCTTCEEEEESC-CS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGG-G-TTTS-C
T ss_pred             cccCCCCCCEEEEEcc-cC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCccc-c-cccC-c
Confidence            4456788999999997 44 888888888876 699999999987776654211  1  122222211000 0 0112 3


Q ss_pred             cccEEEeCCChH----H-HHHhhccccCCCEEEEE
Q 020487          208 GVDVILDCMGAS----Y-FQRNLGSLNIDGRLFII  237 (325)
Q Consensus       208 ~~d~vi~~~g~~----~-~~~~~~~l~~~g~~v~~  237 (325)
                      .+|+|+......    . +..+.+.|+|+|+++..
T Consensus       143 ~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          143 KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            699999665432    2 57778899999999886

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.02  E-value=0.056  Score=47.14  Aligned_cols=91  Identities=12%  Similarity=0.007  Sum_probs=63.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      ..+|.|+|. |.+|...+..+...|.+|++.++++++.+.+.+.|...     ..+.. ++.+..  ...|+||-|+...
T Consensus        22 ~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~-----~~s~~-e~~~~a--~~~DvVi~~vp~~   92 (358)
T 4e21_A           22 SMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAG-----ARSIE-EFCAKL--VKPRVVWLMVPAA   92 (358)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBC-----CSSHH-HHHHHS--CSSCEEEECSCGG
T ss_pred             CCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEE-----eCCHH-HHHhcC--CCCCEEEEeCCHH
Confidence            468999997 99999999999999999999999999888887766431     11222 222211  2359999998865


Q ss_pred             HH----HHhhccccCCCEEEEEec
Q 020487          220 YF----QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       220 ~~----~~~~~~l~~~g~~v~~g~  239 (325)
                      .+    ..+...++++..++.++.
T Consensus        93 ~v~~vl~~l~~~l~~g~iiId~st  116 (358)
T 4e21_A           93 VVDSMLQRMTPLLAANDIVIDGGN  116 (358)
T ss_dssp             GHHHHHHHHGGGCCTTCEEEECSS
T ss_pred             HHHHHHHHHHhhCCCCCEEEeCCC
Confidence            43    344455667767776643

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=96.02  E-value=0.0032  Score=51.98  Aligned_cols=36  Identities=19%  Similarity=0.259  Sum_probs=32.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK  176 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~  176 (325)
                      .++||+|++|.+|..++..+...|++|++++++.++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQAD   37 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            369999999999999999998899999999987654

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.02  E-value=0.019  Score=49.85  Aligned_cols=89  Identities=22%  Similarity=0.235  Sum_probs=66.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.++.|+|. |.+|..+++.++..|++|++..++....+.+++.|...+     .+    +.+...  ..|+|+-++..
T Consensus       163 ~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~----l~ell~--~aDvV~l~~Pl  230 (351)
T 3jtm_A          163 EGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFV-----ED----LNEMLP--KCDVIVINMPL  230 (351)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEEC-----SC----HHHHGG--GCSEEEECSCC
T ss_pred             cCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEc-----CC----HHHHHh--cCCEEEECCCC
Confidence            4789999998 999999999999999999999988766666667775322     11    222222  57999988873


Q ss_pred             H-H----H-HHhhccccCCCEEEEEec
Q 020487          219 S-Y----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 ~-~----~-~~~~~~l~~~g~~v~~g~  239 (325)
                      . .    + ...+..|+++..+|.++.
T Consensus       231 t~~t~~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          231 TEKTRGMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             CTTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             CHHHHHhhcHHHHhcCCCCCEEEECcC
Confidence            2 1    2 455778999999988764

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.98  E-value=0.024  Score=47.53  Aligned_cols=90  Identities=14%  Similarity=0.094  Sum_probs=62.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH-
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-  219 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-  219 (325)
                      .+|||+|+ |.+|..++..+...|++|++++++..+...+...+...+ ..+-.++.        -.++|+||.|++.. 
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~D~~d~~--------~~~~d~vi~~a~~~~   75 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPL-LWPGEEPS--------LDGVTHLLISTAPDS   75 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEE-ESSSSCCC--------CTTCCEEEECCCCBT
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEE-Eecccccc--------cCCCCEEEECCCccc
Confidence            57999998 999999999999999999999999988877766554333 22222211        24789999998742 


Q ss_pred             ----HHHHhhccccC----CCEEEEEecc
Q 020487          220 ----YFQRNLGSLNI----DGRLFIIGTQ  240 (325)
Q Consensus       220 ----~~~~~~~~l~~----~g~~v~~g~~  240 (325)
                          ....+++.+..    -.++|.++..
T Consensus        76 ~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~  104 (286)
T 3ius_A           76 GGDPVLAALGDQIAARAAQFRWVGYLSTT  104 (286)
T ss_dssp             TBCHHHHHHHHHHHHTGGGCSEEEEEEEG
T ss_pred             cccHHHHHHHHHHHhhcCCceEEEEeecc
Confidence                23334444332    2688877643

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.98  E-value=0.011  Score=50.95  Aligned_cols=88  Identities=13%  Similarity=0.006  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.++.|+|. |.+|..+++.++..|++|++..++..+.+...+.|....      +.. ++.+     ..|+|+-++..
T Consensus       144 ~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------~l~-ell~-----~aDvV~l~~P~  210 (330)
T 4e5n_A          144 DNATVGFLGM-GAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQV------ACS-ELFA-----SSDFILLALPL  210 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEEC------CHH-HHHH-----HCSEEEECCCC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeC------CHH-HHHh-----hCCEEEEcCCC
Confidence            4789999998 999999999999999999999988755555556664211      122 2221     47999988873


Q ss_pred             H-H----H-HHhhccccCCCEEEEEec
Q 020487          219 S-Y----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 ~-~----~-~~~~~~l~~~g~~v~~g~  239 (325)
                      . .    + ...+..|+++..+|.++.
T Consensus       211 t~~t~~li~~~~l~~mk~gailIN~ar  237 (330)
T 4e5n_A          211 NADTLHLVNAELLALVRPGALLVNPCR  237 (330)
T ss_dssp             STTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CHHHHHHhCHHHHhhCCCCcEEEECCC
Confidence            2 1    2 456788999999998864

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=95.97  E-value=0.013  Score=47.47  Aligned_cols=96  Identities=17%  Similarity=0.110  Sum_probs=64.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCC-------CEEEEEecChhhHHHHHH----cC-------CCEEEeCCCchHH
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQG-------VRVFVTAGSEEKLAVCKD----LG-------ADVCINYKTEDFV  197 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g-------~~v~~~~~~~~~~~~~~~----~g-------~~~~~~~~~~~~~  197 (325)
                      .++++++||-+|+ |. |..+..+++..+       .+|+.++.+++..+.+++    .+       .-.+...+.... 
T Consensus        81 ~~~~~~~VLdiG~-G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-  157 (227)
T 1r18_A           81 HLKPGARILDVGS-GS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG-  157 (227)
T ss_dssp             TCCTTCEEEEESC-TT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC-
T ss_pred             hCCCCCEEEEECC-Cc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccC-
Confidence            5788999999997 43 888888888766       499999999887766653    11       112222222110 


Q ss_pred             HHHHHHhCCCcccEEEeCCChHH-HHHhhccccCCCEEEEEec
Q 020487          198 ARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       198 ~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~  239 (325)
                           ......||+|+.+..... ...+.+.|+++|+++..-.
T Consensus       158 -----~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~~  195 (227)
T 1r18_A          158 -----YPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVG  195 (227)
T ss_dssp             -----CGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             -----CCcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEEe
Confidence                 011246999998776543 3677889999999987643

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.95  E-value=0.045  Score=45.50  Aligned_cols=101  Identities=16%  Similarity=0.152  Sum_probs=68.5

Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHH
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEE  203 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~  203 (325)
                      +.....+.++.+||-+|+ | .|..+..+++..+.+|+.++.++...+.+++    .+..   .+...+.....      
T Consensus        53 l~~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------  124 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVGC-G-IGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP------  124 (273)
T ss_dssp             HHHHSCCCTTCEEEEESC-T-TSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC------
T ss_pred             HHHhcCCCCCCEEEEeCC-C-CCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC------
Confidence            346667889999999997 3 4888888888889999999999987776653    2321   22322221110      


Q ss_pred             hCCCcccEEEeCC-----Ch--HHHHHhhccccCCCEEEEEec
Q 020487          204 TGGKGVDVILDCM-----GA--SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       204 ~~~~~~d~vi~~~-----g~--~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      .....||+|+...     ..  ..+..+.+.|+|||+++....
T Consensus       125 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~  167 (273)
T 3bus_A          125 FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADF  167 (273)
T ss_dssp             SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence            1234699998532     22  236778899999999987653

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=95.95  E-value=0.06  Score=45.90  Aligned_cols=93  Identities=11%  Similarity=0.139  Sum_probs=57.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC---hhhHHHHH-Hc----CCC-EEEeCCCchHHHHHHHHhCCCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGS---EEKLAVCK-DL----GAD-VCINYKTEDFVARVKEETGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~---~~~~~~~~-~~----g~~-~~~~~~~~~~~~~~~~~~~~~~  208 (325)
                      .+.+++|+|+ |++|.+++..+...|+ +|+++.|+   .++.+.+. ++    +.. ...+..+..+   +.+..  ..
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~---~~~~l--~~  220 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHA---FTEAL--AS  220 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHH---HHHHH--HH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhh---hHhhc--cC
Confidence            4789999998 9999999999999999 89999999   55544332 22    221 2233332111   11111  15


Q ss_pred             ccEEEeCCChHH--H-H-H---hhccccCCCEEEEE
Q 020487          209 VDVILDCMGASY--F-Q-R---NLGSLNIDGRLFII  237 (325)
Q Consensus       209 ~d~vi~~~g~~~--~-~-~---~~~~l~~~g~~v~~  237 (325)
                      +|+||+|++...  . . .   -.+.++++..++++
T Consensus       221 ~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~  256 (312)
T 3t4e_A          221 ADILTNGTKVGMKPLENESLIGDVSLLRPELLVTEC  256 (312)
T ss_dssp             CSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEEC
T ss_pred             ceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEe
Confidence            899999987432  1 1 1   12456666666665

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.95  E-value=0.045  Score=47.53  Aligned_cols=88  Identities=17%  Similarity=0.178  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.++.|+|. |.+|..+++.++..|++|++.+++. +.+...+.|...+     .+.. ++.+     ..|+|+-++..
T Consensus       159 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~~~~~g~~~~-----~~l~-ell~-----~aDiV~l~~Pl  225 (352)
T 3gg9_A          159 KGQTLGIFGY-GKIGQLVAGYGRAFGMNVLVWGREN-SKERARADGFAVA-----ESKD-ALFE-----QSDVLSVHLRL  225 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSHH-HHHHHHHTTCEEC-----SSHH-HHHH-----HCSEEEECCCC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEECCCC-CHHHHHhcCceEe-----CCHH-HHHh-----hCCEEEEeccC
Confidence            3779999998 9999999999999999999999775 3344556666321     1122 2211     47999988763


Q ss_pred             H-H-----HHHhhccccCCCEEEEEec
Q 020487          219 S-Y-----FQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 ~-~-----~~~~~~~l~~~g~~v~~g~  239 (325)
                      . .     ....+..|+++..+|.++.
T Consensus       226 t~~t~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          226 NDETRSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             cHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            2 1     1456788999999998874

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=95.94  E-value=0.024  Score=50.20  Aligned_cols=39  Identities=15%  Similarity=0.092  Sum_probs=31.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      .+.+.+|||+|++|-+|..++..+...|++|+++++...
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~   46 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVR   46 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCc
Confidence            356889999999999999999999888999999987643

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=95.93  E-value=0.013  Score=50.17  Aligned_cols=87  Identities=14%  Similarity=0.129  Sum_probs=64.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.++.|+|. |.+|..+++.++..|++|++.+++.++. .+.+.|+.. .     +.. ++.+     ..|+|+.++..
T Consensus       141 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~-~-----~l~-ell~-----~aDvVvl~~P~  206 (313)
T 2ekl_A          141 AGKTIGIVGF-GRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKA-V-----SLE-ELLK-----NSDVISLHVTV  206 (313)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEE-C-----CHH-HHHH-----HCSEEEECCCC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCcee-c-----CHH-HHHh-----hCCEEEEeccC
Confidence            5789999998 9999999999999999999999887664 455677542 1     121 2211     47999999874


Q ss_pred             HH-----H-HHhhccccCCCEEEEEec
Q 020487          219 SY-----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 ~~-----~-~~~~~~l~~~g~~v~~g~  239 (325)
                      ..     + ...+..|++++.++.++.
T Consensus       207 ~~~t~~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          207 SKDAKPIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             CTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred             ChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence            22     2 355678899988888765

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.92  E-value=0.059  Score=43.46  Aligned_cols=92  Identities=18%  Similarity=0.124  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh-hHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .|.+|||.|+ |.+|...++.+...|++|+++..... ....+.+.+.-..+...-..  ..      -.++|+||.+.+
T Consensus        30 ~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~--~d------L~~adLVIaAT~  100 (223)
T 3dfz_A           30 KGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGE--ED------LLNVFFIVVATN  100 (223)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCG--GG------SSSCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCH--hH------hCCCCEEEECCC
Confidence            4788999998 99999999999999999999986543 22333233322333211110  01      136899999999


Q ss_pred             hHHHHHhhccccCCCEEEEEec
Q 020487          218 ASYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       218 ~~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      .+..+..+......|..|....
T Consensus       101 d~~~N~~I~~~ak~gi~VNvvD  122 (223)
T 3dfz_A          101 DQAVNKFVKQHIKNDQLVNMAS  122 (223)
T ss_dssp             CTHHHHHHHHHSCTTCEEEC--
T ss_pred             CHHHHHHHHHHHhCCCEEEEeC
Confidence            8776555444444666665533

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=95.92  E-value=0.015  Score=49.32  Aligned_cols=86  Identities=15%  Similarity=0.049  Sum_probs=60.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh-H
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-S  219 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~  219 (325)
                      .+|.|+|+ |.+|...+..+...|.+|++.++++++.+.+.+.|.. ..    .+..+.+      ..+|+||.|++. .
T Consensus         6 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-~~----~~~~~~~------~~~D~vi~~v~~~~   73 (299)
T 1vpd_A            6 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAE-TA----STAKAIA------EQCDVIITMLPNSP   73 (299)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-EC----SSHHHHH------HHCSEEEECCSSHH
T ss_pred             ceEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCe-ec----CCHHHHH------hCCCEEEEECCCHH
Confidence            37999997 9999999999888899999999999888877766542 11    1111111      147999999984 3


Q ss_pred             HHHHhh-------ccccCCCEEEEEe
Q 020487          220 YFQRNL-------GSLNIDGRLFIIG  238 (325)
Q Consensus       220 ~~~~~~-------~~l~~~g~~v~~g  238 (325)
                      .+...+       ..++++..++.++
T Consensus        74 ~~~~~~~~~~~l~~~l~~~~~vv~~s   99 (299)
T 1vpd_A           74 HVKEVALGENGIIEGAKPGTVLIDMS   99 (299)
T ss_dssp             HHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             HHHHHHhCcchHhhcCCCCCEEEECC
Confidence            344333       4466777666653

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=95.92  E-value=0.029  Score=44.49  Aligned_cols=71  Identities=20%  Similarity=0.308  Sum_probs=48.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEEeCC--CchHHHHHHHHhCCCcccEEEeCCC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYK--TEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~--~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +++|+|++|.+|..+++.+...  +|++++++.++.+.+. +++. ..+..+  +......+.+..  .++|+++.+.|
T Consensus         2 ~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~--~~id~vi~~ag   75 (207)
T 2yut_A            2 RVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEA--GPLDLLVHAVG   75 (207)
T ss_dssp             EEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHH--CSEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence            6899999999999988887766  9999999987766554 3433 333222  222222222222  26999999987

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.91  E-value=0.0018  Score=53.15  Aligned_cols=69  Identities=32%  Similarity=0.411  Sum_probs=46.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEE--eCCCchHHHHHH---HHhCCCcccEEEe
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDFVARVK---EETGGKGVDVILD  214 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~---~~~~~~~~d~vi~  214 (325)
                      +.+++|+|++|.+|..+++.+...|++|++++++.+ .   .++   ..+  |-.+......+.   +..+  ++|+++.
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~---~~~---~~~~~D~~~~~~~~~~~~~~~~~~--~~d~li~   72 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G---EDL---IYVEGDVTREEDVRRAVARAQEEA--PLFAVVS   72 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S---SSS---EEEECCTTCHHHHHHHHHHHHHHS--CEEEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c---cce---EEEeCCCCCHHHHHHHHHHHHhhC--CceEEEE
Confidence            568999999999999999998888999999998765 1   111   223  333322222222   2222  6899999


Q ss_pred             CCC
Q 020487          215 CMG  217 (325)
Q Consensus       215 ~~g  217 (325)
                      +.|
T Consensus        73 ~ag   75 (242)
T 1uay_A           73 AAG   75 (242)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            876

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.89  E-value=0.029  Score=49.08  Aligned_cols=89  Identities=11%  Similarity=0.070  Sum_probs=65.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .|.+|.|+|. |.+|..+++.++..|++ |++.+++....+...+.|+..+     .+.. .+   ..  ..|+|+.|+.
T Consensus       163 ~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~-el---l~--~aDvV~l~~P  230 (364)
T 2j6i_A          163 EGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV-----ENIE-EL---VA--QADIVTVNAP  230 (364)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC-----SSHH-HH---HH--TCSEEEECCC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec-----CCHH-HH---Hh--cCCEEEECCC
Confidence            5789999998 99999999999999997 9999987766666666764321     1121 22   21  5799999887


Q ss_pred             hH-H----H-HHhhccccCCCEEEEEec
Q 020487          218 AS-Y----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       218 ~~-~----~-~~~~~~l~~~g~~v~~g~  239 (325)
                      .. .    + ...+..|++++.+|.++.
T Consensus       231 ~t~~t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          231 LHAGTKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence            53 1    2 345688999988888764

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=95.89  E-value=0.026  Score=43.90  Aligned_cols=98  Identities=16%  Similarity=0.160  Sum_probs=64.9

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC--EEEeCCCchHHHHHHHHhCCC
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      ...++++++||-.|+ | .|..+..+++. +.+|++++.+++..+.+++    .+..  .++......    +.... ..
T Consensus        17 ~~~~~~~~~vLDiGc-G-~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~----l~~~~-~~   88 (185)
T 3mti_A           17 AEVLDDESIVVDATM-G-NGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHEN----LDHYV-RE   88 (185)
T ss_dssp             HTTCCTTCEEEESCC-T-TSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGG----GGGTC-CS
T ss_pred             HHhCCCCCEEEEEcC-C-CCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHH----HHhhc-cC
Confidence            445788999999997 3 48888888887 8899999999988776653    3432  223222111    11112 34


Q ss_pred             cccEEEeCCCh----------------HHHHHhhccccCCCEEEEEec
Q 020487          208 GVDVILDCMGA----------------SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       208 ~~d~vi~~~g~----------------~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      .||+|+.+.+-                ..+..+.+.|+|||+++....
T Consensus        89 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           89 PIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             CEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             CcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            69999866321                124667789999999988753

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.89  E-value=0.005  Score=52.53  Aligned_cols=100  Identities=10%  Similarity=0.027  Sum_probs=62.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH-HHHHHcCC--CEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGA--DVCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .|.+++|+|++..+|..+++++...|++|+++.++..+. +....++.  +........ ....+.+.+.  .+|+||.+
T Consensus       176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t-~~~~L~e~l~--~ADIVIsA  252 (320)
T 1edz_A          176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEY-SEDLLKKCSL--DSDVVITG  252 (320)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEEC-CHHHHHHHHH--HCSEEEEC
T ss_pred             CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccc-cHhHHHHHhc--cCCEEEEC
Confidence            588999999955679999999999999999988763322 11112222  111000000 0123344332  58999999


Q ss_pred             CChHHHHHhhccccCCCEEEEEeccC
Q 020487          216 MGASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       216 ~g~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      +|.+.+----++++++..++++|...
T Consensus       253 tg~p~~vI~~e~vk~GavVIDVgi~r  278 (320)
T 1edz_A          253 VPSENYKFPTEYIKEGAVCINFACTK  278 (320)
T ss_dssp             CCCTTCCBCTTTSCTTEEEEECSSSC
T ss_pred             CCCCcceeCHHHcCCCeEEEEcCCCc
Confidence            99864212235678888888887643

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=95.87  E-value=0.027  Score=44.94  Aligned_cols=96  Identities=15%  Similarity=0.128  Sum_probs=66.9

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCE--EEeCCCchHHHHHHHHhCCCcccEE
Q 020487          135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV--CINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       135 ~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      ..+.++.+||-+|+ | .|..+..+++. |.+|++++.++...+.+++.+...  ++..+...+       .....||+|
T Consensus        42 ~~~~~~~~vLdiG~-G-~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-------~~~~~~D~v  111 (218)
T 3ou2_A           42 RAGNIRGDVLELAS-G-TGYWTRHLSGL-ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-------TPDRQWDAV  111 (218)
T ss_dssp             TTTTSCSEEEEESC-T-TSHHHHHHHHH-SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-------CCSSCEEEE
T ss_pred             hcCCCCCeEEEECC-C-CCHHHHHHHhc-CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-------CCCCceeEE
Confidence            34678889999997 3 37777777777 889999999999888888755322  222222211       234579999


Q ss_pred             EeCCC-----h----HHHHHhhccccCCCEEEEEecc
Q 020487          213 LDCMG-----A----SYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       213 i~~~g-----~----~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      +....     .    ..+..+.+.|+|||.++.....
T Consensus       112 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  148 (218)
T 3ou2_A          112 FFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT  148 (218)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             EEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence            86543     2    2256777899999999987543

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=95.87  E-value=0.043  Score=49.57  Aligned_cols=79  Identities=24%  Similarity=0.382  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH---HHHHHcCCCEE-EeCCCchHH----HHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL---AVCKDLGADVC-INYKTEDFV----ARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~---~~~~~~g~~~~-~~~~~~~~~----~~~~~~~~~~~~d  210 (325)
                      ++.+++|+|++|.+|..+++.+...|++|+++.++....   +..++.+...+ .|-.+....    +.+.+..+ ..+|
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g-~~id  290 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHG-GKVD  290 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHST-TCCS
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcC-CCce
Confidence            467999999999999999999989999999998764322   22234554322 233332222    22223333 2499


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      ++|++.|.
T Consensus       291 ~lV~nAGv  298 (454)
T 3u0b_A          291 ILVNNAGI  298 (454)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999874

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=95.86  E-value=0.012  Score=47.61  Aligned_cols=97  Identities=19%  Similarity=0.152  Sum_probs=64.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHH----cCC-C--EEEeCCCchHHHHHHHHhC-C
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGA-D--VCINYKTEDFVARVKEETG-G  206 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~----~g~-~--~~~~~~~~~~~~~~~~~~~-~  206 (325)
                      ..++.+||-+|+ | .|..+..+++..  +.+|+.++.+++..+.+++    .|. +  .++..+.   .+.+.+... +
T Consensus        67 ~~~~~~vLdiG~-G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~---~~~~~~~~~~~  141 (229)
T 2avd_A           67 LIQAKKALDLGT-F-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPA---LETLDELLAAG  141 (229)
T ss_dssp             HTTCCEEEEECC-T-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCH---HHHHHHHHHTT
T ss_pred             hcCCCEEEEEcC-C-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCH---HHHHHHHHhcC
Confidence            457889999997 3 788888999876  5799999999887776653    343 1  2222222   222222221 1


Q ss_pred             --CcccEEEeCCCh----HHHHHhhccccCCCEEEEEe
Q 020487          207 --KGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       207 --~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~g  238 (325)
                        ..||+|+.....    ..+..+.+.|++||.++...
T Consensus       142 ~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          142 EAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             CTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence              479998865443    34677789999999998753

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.86  E-value=0.038  Score=45.33  Aligned_cols=77  Identities=17%  Similarity=0.236  Sum_probs=52.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      +|+|.|++|.+|..+++.+... +.+++.+.+.....+.+...+++.++|.+.........+..-..+.++|+.+.|-
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~   79 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF   79 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence            6899999999999999988766 8898877755444443333456777777665544444433333467888877763

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=95.85  E-value=0.032  Score=48.07  Aligned_cols=75  Identities=23%  Similarity=0.272  Sum_probs=46.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh----hhHHHHHHc-CC-CEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE----EKLAVCKDL-GA-DVCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~----~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      +|||+|++|.+|..+++.+...|++|+++.+..    +..+.++.+ +. -..+..+-.+ .+.+.+...+.++|+||.+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN-EALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTC-HHHHHHHHHHTTCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCC-HHHHHHHhhccCCCEEEEC
Confidence            689999999999999999988999999987532    222333322 22 1233222221 1222222221258999999


Q ss_pred             CC
Q 020487          216 MG  217 (325)
Q Consensus       216 ~g  217 (325)
                      ++
T Consensus        81 A~   82 (338)
T 1udb_A           81 AG   82 (338)
T ss_dssp             CS
T ss_pred             Cc
Confidence            87

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=95.84  E-value=0.045  Score=47.25  Aligned_cols=101  Identities=15%  Similarity=0.160  Sum_probs=66.0

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHHH----cC------------CC-EEEeCCC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LG------------AD-VCINYKT  193 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~~----~g------------~~-~~~~~~~  193 (325)
                      ....+.++++||-.|+ |. |..+..+++..|  .+|+.++.++...+.+++    ++            .. .++..+.
T Consensus        99 ~~l~~~~g~~VLDiG~-G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~  176 (336)
T 2b25_A           99 SMMDINPGDTVLEAGS-GS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI  176 (336)
T ss_dssp             HHHTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT
T ss_pred             HhcCCCCCCEEEEeCC-Cc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECCh
Confidence            4457789999999997 44 888888888765  699999999987766653    11            11 2222222


Q ss_pred             chHHHHHHHHhCCCcccEEEeCCChH--HHHHhhccccCCCEEEEEec
Q 020487          194 EDFVARVKEETGGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       194 ~~~~~~~~~~~~~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ......+    ....||+|+-.....  .+..+.+.|+|||+++....
T Consensus       177 ~~~~~~~----~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          177 SGATEDI----KSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             TCCC-----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             HHccccc----CCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            2211011    123599998765543  36888999999999997753

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=95.82  E-value=0.014  Score=50.09  Aligned_cols=74  Identities=18%  Similarity=0.257  Sum_probs=47.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcC-CCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG-ADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .+|||+|++|.+|..+++.+...|++|++++++.....  +.+. .-..+..+-.+ .+.+.+.....++|+||.+++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~d~vih~a~   76 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE--DAITEGAKFYNGDLRD-KAFLRDVFTQENIEAVMHFAA   76 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG--GGSCTTSEEEECCTTC-HHHHHHHHHHSCEEEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch--hhcCCCcEEEECCCCC-HHHHHHHHhhcCCCEEEECCc
Confidence            36999999999999999999999999999987654321  1221 11233222222 122333222136999999987

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.82  E-value=0.0091  Score=52.67  Aligned_cols=89  Identities=11%  Similarity=-0.036  Sum_probs=64.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.++.|+|. |.+|..+++.++..|++|++..++....+..+++|....     .+.    .+...  ..|+|+.++..
T Consensus       190 ~gktvGIIGl-G~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~-----~~l----~ell~--~aDvV~l~~Pl  257 (393)
T 2nac_A          190 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWH-----ATR----EDMYP--VCDVVTLNCPL  257 (393)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEEC-----SSH----HHHGG--GCSEEEECSCC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceec-----CCH----HHHHh--cCCEEEEecCC
Confidence            4789999998 999999999999999999999988666666666675321     111    22222  57999988873


Q ss_pred             H-H----H-HHhhccccCCCEEEEEec
Q 020487          219 S-Y----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 ~-~----~-~~~~~~l~~~g~~v~~g~  239 (325)
                      . .    + ...+..|+++..+|.++.
T Consensus       258 t~~t~~li~~~~l~~mk~gailIN~aR  284 (393)
T 2nac_A          258 HPETEHMINDETLKLFKRGAYIVNTAR  284 (393)
T ss_dssp             CTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             chHHHHHhhHHHHhhCCCCCEEEECCC
Confidence            2 1    2 355678888888888764

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=95.82  E-value=0.069  Score=43.08  Aligned_cols=100  Identities=8%  Similarity=0.032  Sum_probs=64.6

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHH----cCCC--EEEeCCCchHHHHHHHHh
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVARVKEET  204 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~  204 (325)
                      ...+.+++.+||-+|+  +.|..+..+++.+  +.+|+.++.+++..+.+++    .|..  .+-- ...+..+.+ ...
T Consensus        50 ~~~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~-~~gda~~~l-~~~  125 (221)
T 3dr5_A           50 ATTNGNGSTGAIAITP--AAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRF-LLSRPLDVM-SRL  125 (221)
T ss_dssp             HHSCCTTCCEEEEEST--THHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEE-ECSCHHHHG-GGS
T ss_pred             HhhCCCCCCCEEEEcC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEE-EEcCHHHHH-HHh
Confidence            3334445669999985  5788899999876  6799999999987766653    4433  2211 111111111 112


Q ss_pred             CCCcccEEEeCCCh----HHHHHhhccccCCCEEEE
Q 020487          205 GGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFI  236 (325)
Q Consensus       205 ~~~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~  236 (325)
                      ....||+||-....    ..+..+.+.|+|||.++.
T Consensus       126 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~  161 (221)
T 3dr5_A          126 ANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVL  161 (221)
T ss_dssp             CTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEE
T ss_pred             cCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEE
Confidence            13479999865443    236777899999999986

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=95.81  E-value=0.014  Score=51.40  Aligned_cols=74  Identities=12%  Similarity=0.055  Sum_probs=50.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      ..+|||+|++|.+|..+++.+...|++|++++++..+.......+. .++..+-.+ .+.+.+...  ++|+||.+++
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v-~~~~~Dl~d-~~~~~~~~~--~~d~Vih~A~  102 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCD-EFHLVDLRV-MENCLKVTE--GVDHVFNLAA  102 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCS-EEEECCTTS-HHHHHHHHT--TCSEEEECCC
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCc-eEEECCCCC-HHHHHHHhC--CCCEEEECce
Confidence            4689999999999999999998899999999987654322111122 233222222 233444443  6999999987

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=95.79  E-value=0.02  Score=49.41  Aligned_cols=38  Identities=24%  Similarity=0.232  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK  176 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~  176 (325)
                      .+.+|||+|++|.+|..++..+...|++|++++++...
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~   41 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTN   41 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcch
Confidence            46789999999999999999998899999999887663

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=95.79  E-value=0.14  Score=45.34  Aligned_cols=109  Identities=11%  Similarity=0.149  Sum_probs=69.5

Q ss_pred             HHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-----------HcCC--CE--E
Q 020487          125 CTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-----------DLGA--DV--C  188 (325)
Q Consensus       125 ~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-----------~~g~--~~--~  188 (325)
                      ...+..+.....++++++|+=+|+  +.|..++++++..|+ +|+.++.++...+.++           ..|.  ..  +
T Consensus       159 ~~~i~~il~~l~l~~gd~VLDLGC--GtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVef  236 (438)
T 3uwp_A          159 FDLVAQMIDEIKMTDDDLFVDLGS--GVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTL  236 (438)
T ss_dssp             HHHHHHHHHHHCCCTTCEEEEESC--TTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEE
T ss_pred             HHHHHHHHHhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEE
Confidence            333444557778999999999986  568888999988888 5999999876443332           2332  22  3


Q ss_pred             EeCCCchHHHHHHHHhCCCcccEEEeCC---Ch---HHHHHhhccccCCCEEEEEec
Q 020487          189 INYKTEDFVARVKEETGGKGVDVILDCM---GA---SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~d~vi~~~---g~---~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      +..+.....  ......  .+|+|+-..   ..   ..+...++.|+|||++|+.-.
T Consensus       237 i~GD~~~lp--~~d~~~--~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~  289 (438)
T 3uwp_A          237 ERGDFLSEE--WRERIA--NTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKP  289 (438)
T ss_dssp             EECCTTSHH--HHHHHH--TCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred             EECcccCCc--cccccC--CccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeec
Confidence            333332221  111111  589988532   22   235667889999999998733

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=95.78  E-value=0.012  Score=49.43  Aligned_cols=89  Identities=12%  Similarity=0.039  Sum_probs=57.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .+.+++|+|+ |.+|.+++..+...|+ +|+++.|+.++.+.+.+ .. ...     . ...+.+..  ..+|+||+|++
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~-~~~-----~-~~~~~~~~--~~aDiVInaTp  184 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NI-NKI-----N-LSHAESHL--DEFDIIINTTP  184 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CC-EEE-----C-HHHHHHTG--GGCSEEEECCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hc-ccc-----c-HhhHHHHh--cCCCEEEECcc
Confidence            4778999998 9999999999999999 89999999876543321 11 111     1 22333322  26899999987


Q ss_pred             hHHHHH-----hhccccCCCEEEEEe
Q 020487          218 ASYFQR-----NLGSLNIDGRLFIIG  238 (325)
Q Consensus       218 ~~~~~~-----~~~~l~~~g~~v~~g  238 (325)
                      ......     -.+.++++..++++.
T Consensus       185 ~Gm~~~~~~~l~~~~l~~~~~V~D~v  210 (277)
T 3don_A          185 AGMNGNTDSVISLNRLASHTLVSDIV  210 (277)
T ss_dssp             -------CCSSCCTTCCSSCEEEESC
T ss_pred             CCCCCCCcCCCCHHHcCCCCEEEEec
Confidence            532111     235577777777764

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.77  E-value=0.027  Score=48.33  Aligned_cols=88  Identities=8%  Similarity=-0.012  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .|.++.|+|. |.+|..+++.++..|++|++.++ +.++ ....++|... .    .+.. ++..     ..|+|+.|+.
T Consensus       145 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~~g~~~-~----~~l~-ell~-----~aDvVil~~p  211 (320)
T 1gdh_A          145 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASS-SDEASYQATF-H----DSLD-SLLS-----VSQFFSLNAP  211 (320)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHHHHTCEE-C----SSHH-HHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhhhcCcEE-c----CCHH-HHHh-----hCCEEEEecc
Confidence            4789999998 99999999999999999999998 6655 3455666532 1    1121 2211     5799999887


Q ss_pred             hHH-----H-HHhhccccCCCEEEEEec
Q 020487          218 ASY-----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       218 ~~~-----~-~~~~~~l~~~g~~v~~g~  239 (325)
                      ...     + ...+..|+++..++.++.
T Consensus       212 ~~~~t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          212 STPETRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             CchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence            421     2 345678999998888865

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.77  E-value=0.036  Score=45.82  Aligned_cols=98  Identities=16%  Similarity=0.187  Sum_probs=65.2

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC--EEEeCCCchHHHHHHHHhCC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~~~  206 (325)
                      ......++.+||-+|+ | .|..+..+++. +.+|+.++.+++..+.+++    .+..  .+...+...+.      ...
T Consensus        31 ~~l~~~~~~~vLDiGc-G-~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~------~~~  101 (260)
T 1vl5_A           31 QIAALKGNEEVLDVAT-G-GGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP------FTD  101 (260)
T ss_dssp             HHHTCCSCCEEEEETC-T-TCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC------SCT
T ss_pred             HHhCCCCCCEEEEEeC-C-CCHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC------CCC
Confidence            4445678999999997 3 57777777766 4599999999987776653    2322  22222221110      223


Q ss_pred             CcccEEEeCCCh-------HHHHHhhccccCCCEEEEEec
Q 020487          207 KGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       207 ~~~d~vi~~~g~-------~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ..||+|+.+..-       ..+..+.+.|+|||+++....
T Consensus       102 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~  141 (260)
T 1vl5_A          102 ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN  141 (260)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence            479999976543       346788899999999988643

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=95.77  E-value=0.02  Score=48.77  Aligned_cols=37  Identities=11%  Similarity=0.041  Sum_probs=29.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK  176 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~  176 (325)
                      +.+|||+|++|.+|..+++.+...|++|++++++..+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   38 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR   38 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC
Confidence            4689999999999999999999899999999976543

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.76  E-value=0.064  Score=45.75  Aligned_cols=87  Identities=13%  Similarity=0.015  Sum_probs=61.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      -.+|.|+|. |.+|...++.+...|.+|++.++++++.+.+.+.|....     .+..+.+ +     ..|+||-|++.+
T Consensus        21 m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~-----~~~~~~~-~-----~aDvvi~~vp~~   88 (310)
T 3doj_A           21 MMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVC-----ESPAEVI-K-----KCKYTIAMLSDP   88 (310)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEEC-----SSHHHHH-H-----HCSEEEECCSSH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEc-----CCHHHHH-H-----hCCEEEEEcCCH
Confidence            357999998 999999999999999999999999999888887775321     1112122 1     468999998754


Q ss_pred             -HHHHhh-------ccccCCCEEEEEe
Q 020487          220 -YFQRNL-------GSLNIDGRLFIIG  238 (325)
Q Consensus       220 -~~~~~~-------~~l~~~g~~v~~g  238 (325)
                       .+...+       ..++++..++.++
T Consensus        89 ~~~~~v~~~~~~l~~~l~~g~~vv~~s  115 (310)
T 3doj_A           89 CAALSVVFDKGGVLEQICEGKGYIDMS  115 (310)
T ss_dssp             HHHHHHHHSTTCGGGGCCTTCEEEECS
T ss_pred             HHHHHHHhCchhhhhccCCCCEEEECC
Confidence             333333       4456666666654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=95.75  E-value=0.021  Score=48.01  Aligned_cols=36  Identities=19%  Similarity=0.168  Sum_probs=31.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      ++..+|||+|++|.+|..+++.+...|++|++++++
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   45 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ   45 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc
Confidence            456789999999999999999999999999999875

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.75  E-value=0.029  Score=48.15  Aligned_cols=87  Identities=13%  Similarity=0.179  Sum_probs=61.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      ..+|.|+|. |.+|...++.+...|.+|++.++++++.+.+.+.|.... .    +    ..+..  ...|+||.|+...
T Consensus        31 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~-~----~----~~e~~--~~aDvVi~~vp~~   98 (320)
T 4dll_A           31 ARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIH-E----Q----ARAAA--RDADIVVSMLENG   98 (320)
T ss_dssp             CSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEE-S----S----HHHHH--TTCSEEEECCSSH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEee-C----C----HHHHH--hcCCEEEEECCCH
Confidence            458999998 999999999999999999999999998888877665321 1    1    11222  2578888888853


Q ss_pred             -HHHHhh------ccccCCCEEEEEe
Q 020487          220 -YFQRNL------GSLNIDGRLFIIG  238 (325)
Q Consensus       220 -~~~~~~------~~l~~~g~~v~~g  238 (325)
                       .+...+      ..++++..++.++
T Consensus        99 ~~~~~v~~~~~~~~~l~~~~~vi~~s  124 (320)
T 4dll_A           99 AVVQDVLFAQGVAAAMKPGSLFLDMA  124 (320)
T ss_dssp             HHHHHHHTTTCHHHHCCTTCEEEECS
T ss_pred             HHHHHHHcchhHHhhCCCCCEEEecC
Confidence             333333      3456666666654

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=95.73  E-value=0.018  Score=50.58  Aligned_cols=75  Identities=15%  Similarity=0.069  Sum_probs=49.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHH-HHHHcCCC-EEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLA-VCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~-~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      +.+|||+|++|.+|..+++.+...| ++|++++++..... .+.. ... .++..+-.+ .+.+.+...  ++|+||.++
T Consensus        32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~-~~~v~~~~~Dl~d-~~~l~~~~~--~~d~Vih~A  107 (377)
T 2q1s_A           32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPD-HPAVRFSETSITD-DALLASLQD--EYDYVFHLA  107 (377)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCC-CTTEEEECSCTTC-HHHHHHCCS--CCSEEEECC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccC-CCceEEEECCCCC-HHHHHHHhh--CCCEEEECC
Confidence            5789999999999999999999999 99999998754321 1110 111 223222222 234444443  799999998


Q ss_pred             Ch
Q 020487          217 GA  218 (325)
Q Consensus       217 g~  218 (325)
                      +.
T Consensus       108 ~~  109 (377)
T 2q1s_A          108 TY  109 (377)
T ss_dssp             CC
T ss_pred             Cc
Confidence            73

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=95.73  E-value=0.029  Score=45.20  Aligned_cols=98  Identities=15%  Similarity=0.107  Sum_probs=63.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHHhCCC
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      ..++.+||-+|+  +.|..+..+++..  +.+|+.++.+++..+.+++    .|..   .++..+.......+.. .+..
T Consensus        56 ~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-~~~~  132 (223)
T 3duw_A           56 IQGARNILEIGT--LGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIEN-EKYE  132 (223)
T ss_dssp             HHTCSEEEEECC--TTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHH-TTCC
T ss_pred             hhCCCEEEEecC--CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh-cCCC
Confidence            356889999996  3688888889887  6799999999987766653    3432   2332222222112211 1113


Q ss_pred             cccEEEeCCCh----HHHHHhhccccCCCEEEEE
Q 020487          208 GVDVILDCMGA----SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       208 ~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~  237 (325)
                      .||+|+-....    ..+..+.+.|+|||.++.-
T Consensus       133 ~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~  166 (223)
T 3duw_A          133 PFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGD  166 (223)
T ss_dssp             CCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred             CcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEe
Confidence            69999855443    2367778999999988764

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.71  E-value=0.048  Score=47.15  Aligned_cols=91  Identities=15%  Similarity=0.089  Sum_probs=62.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  220 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~  220 (325)
                      .+|.|+|. |.+|.+.+..++..|.+|++.++++++.+.+++.|.....     +..+.+.+..  ...|+||-|+....
T Consensus         9 ~kIgIIG~-G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~-----~~~e~~~~a~--~~aDlVilavP~~~   80 (341)
T 3ktd_A            9 RPVCILGL-GLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSA-----DLEATLQRAA--AEDALIVLAVPMTA   80 (341)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEES-----CHHHHHHHHH--HTTCEEEECSCHHH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeC-----CHHHHHHhcc--cCCCEEEEeCCHHH
Confidence            57999997 9999999999999999999999999998888888874321     1122222211  14699999998755


Q ss_pred             HHHhhc---cccCCCEEEEEec
Q 020487          221 FQRNLG---SLNIDGRLFIIGT  239 (325)
Q Consensus       221 ~~~~~~---~l~~~g~~v~~g~  239 (325)
                      +...++   .++++..++++++
T Consensus        81 ~~~vl~~l~~~~~~~iv~Dv~S  102 (341)
T 3ktd_A           81 IDSLLDAVHTHAPNNGFTDVVS  102 (341)
T ss_dssp             HHHHHHHHHHHCTTCCEEECCS
T ss_pred             HHHHHHHHHccCCCCEEEEcCC
Confidence            433332   2355555555554

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=95.70  E-value=0.03  Score=46.89  Aligned_cols=98  Identities=14%  Similarity=0.089  Sum_probs=67.5

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHH----c-CCCE--EEeCCCchHHHHHHHH
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----L-GADV--CINYKTEDFVARVKEE  203 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~----~-g~~~--~~~~~~~~~~~~~~~~  203 (325)
                      ....++++++||-.|+ | .|..+..+++..  +.+|++++.+++..+.+++    . |.+.  +...+...       .
T Consensus       104 ~~~~~~~~~~VLD~G~-G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-------~  174 (275)
T 1yb2_A          104 MRCGLRPGMDILEVGV-G-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-------F  174 (275)
T ss_dssp             --CCCCTTCEEEEECC-T-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-------C
T ss_pred             HHcCCCCcCEEEEecC-C-CCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-------c
Confidence            5567889999999997 3 577778888773  6799999999988877664    2 4332  22222211       1


Q ss_pred             hCCCcccEEEeCCChH--HHHHhhccccCCCEEEEEec
Q 020487          204 TGGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       204 ~~~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g~  239 (325)
                      .....||+|+......  .+..+.+.|+++|+++....
T Consensus       175 ~~~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~  212 (275)
T 1yb2_A          175 ISDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP  212 (275)
T ss_dssp             CCSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             CcCCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            2234699999866543  46788899999999998753

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=95.69  E-value=0.079  Score=43.05  Aligned_cols=95  Identities=11%  Similarity=0.102  Sum_probs=64.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      ....+++|+|+ |.+|..+++.+...|. |+++++++++.+.++ .+. .++..+..+ .+. .+..+-.++|.++-+.+
T Consensus         7 ~~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~-~~i~gd~~~-~~~-l~~a~i~~ad~vi~~~~   80 (234)
T 2aef_A            7 AKSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGA-NFVHGDPTR-VSD-LEKANVRGARAVIVDLE   80 (234)
T ss_dssp             ---CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTC-EEEESCTTC-HHH-HHHTTCTTCSEEEECCS
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCC-eEEEcCCCC-HHH-HHhcCcchhcEEEEcCC
Confidence            34578999998 9999999999988898 999998888877776 554 344433332 122 23334457899999998


Q ss_pred             hHHH----HHhhccccCCCEEEEEe
Q 020487          218 ASYF----QRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       218 ~~~~----~~~~~~l~~~g~~v~~g  238 (325)
                      .+..    ....+.+.++.+++...
T Consensus        81 ~d~~n~~~~~~a~~~~~~~~iia~~  105 (234)
T 2aef_A           81 SDSETIHCILGIRKIDESVRIIAEA  105 (234)
T ss_dssp             CHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred             CcHHHHHHHHHHHHHCCCCeEEEEE
Confidence            7532    23345566766777653

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=95.68  E-value=0.084  Score=43.34  Aligned_cols=101  Identities=10%  Similarity=0.044  Sum_probs=68.4

Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHH
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEE  203 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~  203 (325)
                      +.....+.++.+||-+|+ | .|..+..+++..+.+|++++.++...+.+++    .+..   .++..+...+.      
T Consensus        38 l~~l~~~~~~~~vLDiG~-G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------  109 (257)
T 3f4k_A           38 VSFINELTDDAKIADIGC-G-TGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP------  109 (257)
T ss_dssp             HTTSCCCCTTCEEEEETC-T-TSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS------
T ss_pred             HHHHhcCCCCCeEEEeCC-C-CCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC------
Confidence            333446788999999997 3 4888899999887799999999987776653    3322   22322222211      


Q ss_pred             hCCCcccEEEeCC-----Ch-HHHHHhhccccCCCEEEEEec
Q 020487          204 TGGKGVDVILDCM-----GA-SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       204 ~~~~~~d~vi~~~-----g~-~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      .....||+|+...     +. ..+..+.+.|+|||+++....
T Consensus       110 ~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~  151 (257)
T 3f4k_A          110 FQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEA  151 (257)
T ss_dssp             SCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             CCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            1234799997532     22 236788899999999988753

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.67  E-value=0.028  Score=48.45  Aligned_cols=88  Identities=14%  Similarity=0.120  Sum_probs=62.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+|.|+|. |.+|..+++.++..|.+|++.+++.++.+...+.|....      +..+.+ +     ..|+|+.++..
T Consensus       154 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------~l~e~l-~-----~aDvVi~~vp~  220 (330)
T 2gcg_A          154 TQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV------STPELA-A-----QSDFIVVACSL  220 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC------CHHHHH-H-----HCSEEEECCCC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC------CHHHHH-h-----hCCEEEEeCCC
Confidence            3678999998 999999999999999999999987766555555554221      121112 1     47999998874


Q ss_pred             H-H----H-HHhhccccCCCEEEEEec
Q 020487          219 S-Y----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 ~-~----~-~~~~~~l~~~g~~v~~g~  239 (325)
                      . .    + ...+..|+++..++.++.
T Consensus       221 ~~~t~~~i~~~~~~~mk~gailIn~sr  247 (330)
T 2gcg_A          221 TPATEGLCNKDFFQKMKETAVFINISR  247 (330)
T ss_dssp             CTTTTTCBSHHHHHHSCTTCEEEECSC
T ss_pred             ChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            2 1    2 345567888888876643

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.66  E-value=0.075  Score=42.14  Aligned_cols=96  Identities=17%  Similarity=0.058  Sum_probs=61.4

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHc-CC-----------------CEEEeCCCch
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-GA-----------------DVCINYKTED  195 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~-g~-----------------~~~~~~~~~~  195 (325)
                      ...+.++.+||..|+  +.|..+..+++. |++|+.++.+++..+.+++. +.                 -.++..+...
T Consensus        17 ~l~~~~~~~vLD~GC--G~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~   93 (203)
T 1pjz_A           17 SLNVVPGARVLVPLC--GKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA   93 (203)
T ss_dssp             HHCCCTTCEEEETTT--CCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS
T ss_pred             hcccCCCCEEEEeCC--CCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcccc
Confidence            345678899999997  347777777776 89999999999988877642 11                 1222222222


Q ss_pred             HHHHHHHHhCCCcccEEEeCCC-----hH----HHHHhhccccCCCEEEEE
Q 020487          196 FVARVKEETGGKGVDVILDCMG-----AS----YFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       196 ~~~~~~~~~~~~~~d~vi~~~g-----~~----~~~~~~~~l~~~g~~v~~  237 (325)
                      ...  .. .  ..||+|++...     .+    .+..+.+.|+|||+++++
T Consensus        94 l~~--~~-~--~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           94 LTA--RD-I--GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             STH--HH-H--HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             CCc--cc-C--CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            110  00 0  26999997432     11    246778899999995444

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=95.65  E-value=0.073  Score=44.69  Aligned_cols=87  Identities=16%  Similarity=0.114  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-HcCC---CEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGA---DVCINYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-~~g~---~~~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                      .+.+++|+|+ |.+|.+++..+...|+ +|++..|+.++.+.+. +++.   ....+..+      +    . ..+|+||
T Consensus       125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~------l----~-~~aDiII  192 (281)
T 3o8q_A          125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ------L----K-QSYDVII  192 (281)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------C----C-SCEEEEE
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH------h----c-CCCCEEE
Confidence            5789999998 8999999999999997 9999999988765543 3432   12222111      1    1 3799999


Q ss_pred             eCCChHHHHH----hhccccCCCEEEEE
Q 020487          214 DCMGASYFQR----NLGSLNIDGRLFII  237 (325)
Q Consensus       214 ~~~g~~~~~~----~~~~l~~~g~~v~~  237 (325)
                      +|++......    -.+.++++..++++
T Consensus       193 naTp~gm~~~~~~l~~~~l~~~~~V~Dl  220 (281)
T 3o8q_A          193 NSTSASLDGELPAIDPVIFSSRSVCYDM  220 (281)
T ss_dssp             ECSCCCC----CSCCGGGEEEEEEEEES
T ss_pred             EcCcCCCCCCCCCCCHHHhCcCCEEEEe
Confidence            9987532111    12445666555655

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=95.65  E-value=0.032  Score=48.34  Aligned_cols=85  Identities=21%  Similarity=0.169  Sum_probs=57.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh-HHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      +.+|.|+|+ |.+|.+.++.++..|.+|++..++.++ .+.+++.|.. +.     +..+.+      ...|+|+-|+..
T Consensus        16 ~~~I~IIG~-G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~-~~-----~~~e~~------~~aDvVilavp~   82 (338)
T 1np3_A           16 GKKVAIIGY-GSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLK-VA-----DVKTAV------AAADVVMILTPD   82 (338)
T ss_dssp             TSCEEEECC-SHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCE-EE-----CHHHHH------HTCSEEEECSCH
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCE-Ec-----cHHHHH------hcCCEEEEeCCc
Confidence            357999998 999999999999999999998887655 5666677753 21     111111      147888888887


Q ss_pred             HHHHHhh-----ccccCCCEEEEE
Q 020487          219 SYFQRNL-----GSLNIDGRLFII  237 (325)
Q Consensus       219 ~~~~~~~-----~~l~~~g~~v~~  237 (325)
                      ......+     ..++++..++++
T Consensus        83 ~~~~~v~~~~i~~~l~~~~ivi~~  106 (338)
T 1np3_A           83 EFQGRLYKEEIEPNLKKGATLAFA  106 (338)
T ss_dssp             HHHHHHHHHHTGGGCCTTCEEEES
T ss_pred             HHHHHHHHHHHHhhCCCCCEEEEc
Confidence            5433333     345555555543

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=95.61  E-value=0.038  Score=50.33  Aligned_cols=40  Identities=13%  Similarity=0.143  Sum_probs=34.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC---CCEEEEEecChhhH
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQ---GVRVFVTAGSEEKL  177 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~---g~~v~~~~~~~~~~  177 (325)
                      ..+.+|||+|++|.+|..+++.+...   |.+|+++++++...
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~  113 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE  113 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH
Confidence            45789999999999999998888777   89999999886643

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.59  E-value=0.062  Score=48.64  Aligned_cols=93  Identities=12%  Similarity=0.162  Sum_probs=60.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHc-CCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDL-GADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +.+|+|+|+ |.+|.+++..+... |++|++++++.++.+.+.+. +. ..+..+..+. +.+.+...  ++|+|++|++
T Consensus        23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~-~~~~~D~~d~-~~l~~~l~--~~DvVIn~tp   97 (467)
T 2axq_A           23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGS-KAISLDVTDD-SALDKVLA--DNDVVISLIP   97 (467)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTC-EEEECCTTCH-HHHHHHHH--TSSEEEECSC
T ss_pred             CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCC-cEEEEecCCH-HHHHHHHc--CCCEEEECCc
Confidence            568999998 99999999888887 67999999998877665432 33 2222222221 23333332  6899999999


Q ss_pred             hHHH-HHhhccccCCCEEEEE
Q 020487          218 ASYF-QRNLGSLNIDGRLFII  237 (325)
Q Consensus       218 ~~~~-~~~~~~l~~~g~~v~~  237 (325)
                      .... .....++.++-.++..
T Consensus        98 ~~~~~~v~~a~l~~g~~vvd~  118 (467)
T 2axq_A           98 YTFHPNVVKSAIRTKTDVVTS  118 (467)
T ss_dssp             GGGHHHHHHHHHHHTCEEEEC
T ss_pred             hhhhHHHHHHHHhcCCEEEEe
Confidence            7532 2233456666666654

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=95.59  E-value=0.05  Score=43.44  Aligned_cols=87  Identities=13%  Similarity=0.023  Sum_probs=56.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cC-----CCEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LG-----ADVCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g-----~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      +|+|+|++|.+|...+..+...|.+|++.++++++.+.+.+ ++     .+...    .+..+.+      +++|+|+.|
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~------~~~D~Vi~~   71 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITG----MKNEDAA------EACDIAVLT   71 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEE----EEHHHHH------HHCSEEEEC
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCCh----hhHHHHH------hcCCEEEEe
Confidence            68899966999999999888889999999998887665543 23     12111    1222222      158999999


Q ss_pred             CChHHHHHhhcccc---CCCEEEEEe
Q 020487          216 MGASYFQRNLGSLN---IDGRLFIIG  238 (325)
Q Consensus       216 ~g~~~~~~~~~~l~---~~g~~v~~g  238 (325)
                      +........++.+.   ++..++++.
T Consensus        72 ~~~~~~~~~~~~l~~~~~~~~vi~~~   97 (212)
T 1jay_A           72 IPWEHAIDTARDLKNILREKIVVSPL   97 (212)
T ss_dssp             SCHHHHHHHHHHTHHHHTTSEEEECC
T ss_pred             CChhhHHHHHHHHHHHcCCCEEEEcC
Confidence            99765444433222   455555553

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=95.55  E-value=0.039  Score=47.15  Aligned_cols=36  Identities=25%  Similarity=0.248  Sum_probs=31.9

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       139 ~~~~vli~g~--~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      .+.+++|+|+  ++++|.++++.+...|++|+++++++
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~   45 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPP   45 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHH
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEeccc
Confidence            4789999998  79999999999999999999998653

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=95.54  E-value=0.029  Score=47.91  Aligned_cols=35  Identities=23%  Similarity=0.238  Sum_probs=31.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-Ch
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SE  174 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~  174 (325)
                      |.+|||+|++|.+|..++..+...|++|+++.+ +.
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~   36 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADP   36 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC-
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCc
Confidence            468999999999999999999889999999887 54

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=95.53  E-value=0.025  Score=48.37  Aligned_cols=86  Identities=14%  Similarity=0.055  Sum_probs=60.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC-hH
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-AS  219 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g-~~  219 (325)
                      .+|.|+|+ |.+|...+..+...|.+|++.++++++.+.+.+.|.. +.  .  +..+.+      ..+|+||.|+. ..
T Consensus        31 ~~I~iIG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-~~--~--~~~~~~------~~~DvVi~av~~~~   98 (316)
T 2uyy_A           31 KKIGFLGL-GLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGAR-LG--R--TPAEVV------STCDITFACVSDPK   98 (316)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCE-EC--S--CHHHHH------HHCSEEEECCSSHH
T ss_pred             CeEEEEcc-cHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCE-Ec--C--CHHHHH------hcCCEEEEeCCCHH
Confidence            57999998 9999999998888899999999998888777776642 21  1  111111      14799999998 44


Q ss_pred             HHHHhh-------ccccCCCEEEEEe
Q 020487          220 YFQRNL-------GSLNIDGRLFIIG  238 (325)
Q Consensus       220 ~~~~~~-------~~l~~~g~~v~~g  238 (325)
                      .+...+       ..+.++..++.++
T Consensus        99 ~~~~v~~~~~~~~~~l~~~~~vv~~s  124 (316)
T 2uyy_A           99 AAKDLVLGPSGVLQGIRPGKCYVDMS  124 (316)
T ss_dssp             HHHHHHHSTTCGGGGCCTTCEEEECS
T ss_pred             HHHHHHcCchhHhhcCCCCCEEEECC
Confidence            444333       3466666777664

>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A

Probab=95.49  E-value=0.046  Score=45.06  Aligned_cols=94  Identities=14%  Similarity=0.127  Sum_probs=63.8

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHc----CCC-EEEeCCCchHHHHHHHHhCCCcc
Q 020487          135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GAD-VCINYKTEDFVARVKEETGGKGV  209 (325)
Q Consensus       135 ~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~~~~~~~  209 (325)
                      ..+.++.+||-+|+ | .|..+..+++. +.+|++++.++...+.+++.    ... .+...+...+.      .....|
T Consensus        35 ~~~~~~~~vLDiG~-G-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~------~~~~~f  105 (263)
T 2yqz_A           35 HPKGEEPVFLELGV-G-TGRIALPLIAR-GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP------LPDESV  105 (263)
T ss_dssp             CCSSSCCEEEEETC-T-TSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC------SCTTCE
T ss_pred             cCCCCCCEEEEeCC-c-CCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC------CCCCCe
Confidence            35678999999997 3 37777777776 88999999999888877653    111 22222222110      123469


Q ss_pred             cEEEeCCC-------hHHHHHhhccccCCCEEEEE
Q 020487          210 DVILDCMG-------ASYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       210 d~vi~~~g-------~~~~~~~~~~l~~~g~~v~~  237 (325)
                      |+|+....       ...+..+.+.|+|||.++..
T Consensus       106 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~  140 (263)
T 2yqz_A          106 HGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG  140 (263)
T ss_dssp             EEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence            99997644       13357778899999999876

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.49  E-value=0.046  Score=47.67  Aligned_cols=85  Identities=12%  Similarity=0.128  Sum_probs=61.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      |.++.|+|. |.+|..+++.++..|++|++.+++. +.+...+.|+..      .++ +++   ..  ..|+|+-++...
T Consensus       176 gktvGIIGl-G~IG~~vA~~l~~fG~~V~~~d~~~-~~~~~~~~g~~~------~~l-~el---l~--~aDvV~l~~Plt  241 (365)
T 4hy3_A          176 GSEIGIVGF-GDLGKALRRVLSGFRARIRVFDPWL-PRSMLEENGVEP------ASL-EDV---LT--KSDFIFVVAAVT  241 (365)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHTTSCCEEEEECSSS-CHHHHHHTTCEE------CCH-HHH---HH--SCSEEEECSCSS
T ss_pred             CCEEEEecC-CcccHHHHHhhhhCCCEEEEECCCC-CHHHHhhcCeee------CCH-HHH---Hh--cCCEEEEcCcCC
Confidence            789999998 9999999999999999999999774 344455566531      111 122   21  579998887632


Q ss_pred             -H----H-HHhhccccCCCEEEEEe
Q 020487          220 -Y----F-QRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       220 -~----~-~~~~~~l~~~g~~v~~g  238 (325)
                       .    + ...+..|++++.+|.++
T Consensus       242 ~~T~~li~~~~l~~mk~gailIN~a  266 (365)
T 4hy3_A          242 SENKRFLGAEAFSSMRRGAAFILLS  266 (365)
T ss_dssp             CC---CCCHHHHHTSCTTCEEEECS
T ss_pred             HHHHhhcCHHHHhcCCCCcEEEECc
Confidence             1    2 45677899999998886

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=95.46  E-value=0.058  Score=43.89  Aligned_cols=100  Identities=15%  Similarity=0.079  Sum_probs=65.7

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHHHcCC--C--EEEeCCCchHHHHHHHHhCC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGA--D--VCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~~~g~--~--~~~~~~~~~~~~~~~~~~~~  206 (325)
                      +...++||++||=+|+  +.|..+..+++..|.  +|++++.+++..+.+++.-.  .  ..+..+.... ....  ...
T Consensus        71 ~~l~ikpG~~VldlG~--G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p-~~~~--~~~  145 (233)
T 4df3_A           71 IELPVKEGDRILYLGI--ASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFP-EKYR--HLV  145 (233)
T ss_dssp             SCCCCCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCG-GGGT--TTC
T ss_pred             hhcCCCCCCEEEEecC--cCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCc-cccc--ccc
Confidence            5567899999999997  458888899998764  89999999988877764221  1  1122222111 0111  112


Q ss_pred             CcccEEEeCCCh-----HHHHHhhccccCCCEEEEE
Q 020487          207 KGVDVILDCMGA-----SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       207 ~~~d~vi~~~g~-----~~~~~~~~~l~~~g~~v~~  237 (325)
                      ..+|+|+....-     ..+.++.+.|+|||+++..
T Consensus       146 ~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          146 EGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             CCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            368988765442     1356777889999999875

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=95.45  E-value=0.034  Score=44.98  Aligned_cols=98  Identities=14%  Similarity=0.025  Sum_probs=66.4

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHc----CCCEEEeCCCchHHHHHHHHhCCCc
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GADVCINYKTEDFVARVKEETGGKG  208 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~  208 (325)
                      ....+.++++||-+|+ |. |..+..+++. +.+|++++.+++..+.+++.    +.-.++..+....      ......
T Consensus        64 ~~~~~~~~~~vLdiG~-G~-G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~------~~~~~~  134 (231)
T 1vbf_A           64 DELDLHKGQKVLEIGT-GI-GYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLG------YEEEKP  134 (231)
T ss_dssp             HHTTCCTTCEEEEECC-TT-SHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGC------CGGGCC
T ss_pred             HhcCCCCCCEEEEEcC-CC-CHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccc------cccCCC
Confidence            4556789999999997 43 8888888877 48999999999888877643    2112232222110      011246


Q ss_pred             ccEEEeCCChHH-HHHhhccccCCCEEEEEec
Q 020487          209 VDVILDCMGASY-FQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       209 ~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~  239 (325)
                      ||+|+....-.. ...+.+.|++||+++..-.
T Consensus       135 fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~  166 (231)
T 1vbf_A          135 YDRVVVWATAPTLLCKPYEQLKEGGIMILPIG  166 (231)
T ss_dssp             EEEEEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             ccEEEECCcHHHHHHHHHHHcCCCcEEEEEEc
Confidence            999997765433 3567789999999987744

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=95.45  E-value=0.11  Score=44.86  Aligned_cols=87  Identities=21%  Similarity=0.242  Sum_probs=62.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC----------EEEeCCCchHHHHHHHHhCCCcc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD----------VCINYKTEDFVARVKEETGGKGV  209 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~----------~~~~~~~~~~~~~~~~~~~~~~~  209 (325)
                      ..+|.|+|+ |.+|.+.+..+...|.+|++.++++++.+.+++.|..          ...+  +      ..+ .  ...
T Consensus        14 ~~kI~iIG~-G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~--~------~~~-~--~~a   81 (335)
T 1z82_A           14 EMRFFVLGA-GSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATN--D------LEE-I--KKE   81 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEES--C------GGG-C--CTT
T ss_pred             CCcEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeC--C------HHH-h--cCC
Confidence            467999998 9999999998888899999999998888877765521          1111  0      111 1  267


Q ss_pred             cEEEeCCChHHHHHhhcccc-CCCEEEEEe
Q 020487          210 DVILDCMGASYFQRNLGSLN-IDGRLFIIG  238 (325)
Q Consensus       210 d~vi~~~g~~~~~~~~~~l~-~~g~~v~~g  238 (325)
                      |+||-|+....+..+++.+. ++..++++.
T Consensus        82 DvVil~vk~~~~~~v~~~l~~~~~~vv~~~  111 (335)
T 1z82_A           82 DILVIAIPVQYIREHLLRLPVKPSMVLNLS  111 (335)
T ss_dssp             EEEEECSCGGGHHHHHTTCSSCCSEEEECC
T ss_pred             CEEEEECCHHHHHHHHHHhCcCCCEEEEEe
Confidence            99999999877777777666 444566553

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=95.45  E-value=0.016  Score=50.84  Aligned_cols=35  Identities=14%  Similarity=0.142  Sum_probs=31.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      .+|||+|++|.+|..+++.+...|++|++++++..
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   59 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSS   59 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCcc
Confidence            57999999999999999999989999999998754

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=95.44  E-value=0.039  Score=44.48  Aligned_cols=96  Identities=17%  Similarity=0.067  Sum_probs=64.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHHH----cC-----CC--EEEeCCCchHHHHHHH
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LG-----AD--VCINYKTEDFVARVKE  202 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~~----~g-----~~--~~~~~~~~~~~~~~~~  202 (325)
                      .++++++||-+|+ | .|..+..+++..|  .+|++++.++...+.+++    .+     .+  .++..+....      
T Consensus        74 ~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~------  145 (226)
T 1i1n_A           74 QLHEGAKALDVGS-G-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG------  145 (226)
T ss_dssp             TSCTTCEEEEETC-T-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC------
T ss_pred             hCCCCCEEEEEcC-C-cCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC------
Confidence            3688999999997 4 3888888888765  699999999887776653    22     11  2222221110      


Q ss_pred             HhCCCcccEEEeCCChHH-HHHhhccccCCCEEEEEec
Q 020487          203 ETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       203 ~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~  239 (325)
                      ......||+|+....... +..+.+.|+|||+++..-.
T Consensus       146 ~~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~  183 (226)
T 1i1n_A          146 YAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVG  183 (226)
T ss_dssp             CGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             cccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEe
Confidence            011236999987765433 4677889999999987643

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=95.42  E-value=0.11  Score=42.08  Aligned_cols=99  Identities=16%  Similarity=0.139  Sum_probs=65.4

Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCC---EEEeCCCchHHHHHHHHhCC
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGAD---VCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~  206 (325)
                      +.......++.+||-+|+ | .|..+..+++. |. ++++++.++...+.+++....   .+...+.....      ...
T Consensus        35 l~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~------~~~  105 (243)
T 3bkw_A           35 LRAMLPEVGGLRIVDLGC-G-FGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLH------LPQ  105 (243)
T ss_dssp             HHHHSCCCTTCEEEEETC-T-TCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCC------CCT
T ss_pred             HHHhccccCCCEEEEEcC-c-CCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhcc------CCC
Confidence            334455568899999997 3 36677777766 77 999999999888888764322   22222211110      223


Q ss_pred             CcccEEEeCCCh-------HHHHHhhccccCCCEEEEEe
Q 020487          207 KGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       207 ~~~d~vi~~~g~-------~~~~~~~~~l~~~g~~v~~g  238 (325)
                      ..||+|+....-       ..+..+.+.|+|||+++...
T Consensus       106 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  144 (243)
T 3bkw_A          106 DSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST  144 (243)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence            479999875432       23577788999999998764

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=95.42  E-value=0.59  Score=40.22  Aligned_cols=87  Identities=14%  Similarity=0.158  Sum_probs=57.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-HC-CCEEEEE-ecChhhHHHH-HHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGK-CQ-GVRVFVT-AGSEEKLAVC-KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~-~~-g~~v~~~-~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      -+|.|+|+ |.+|...++.++ .. +++++++ ++++++.+.+ +++|...+++    +    +.+......+|+|+.|+
T Consensus         9 ~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~----~----~~~~l~~~~~D~V~i~t   79 (346)
T 3cea_A            9 LRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT----N----YKDMIDTENIDAIFIVA   79 (346)
T ss_dssp             EEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES----C----HHHHHTTSCCSEEEECS
T ss_pred             ceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC----C----HHHHhcCCCCCEEEEeC
Confidence            47999998 999998888776 44 7786654 5666666544 4567654442    1    23334444799999999


Q ss_pred             ChHH-HHHhhccccCCCEEEEE
Q 020487          217 GASY-FQRNLGSLNIDGRLFII  237 (325)
Q Consensus       217 g~~~-~~~~~~~l~~~g~~v~~  237 (325)
                      +... ...+..+++.| +-|.+
T Consensus        80 p~~~h~~~~~~al~~G-~~v~~  100 (346)
T 3cea_A           80 PTPFHPEMTIYAMNAG-LNVFC  100 (346)
T ss_dssp             CGGGHHHHHHHHHHTT-CEEEE
T ss_pred             ChHhHHHHHHHHHHCC-CEEEE
Confidence            8754 45566677765 44444

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.42  E-value=0.045  Score=47.53  Aligned_cols=89  Identities=11%  Similarity=0.092  Sum_probs=61.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHH-HCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~-~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .|.++.|+|. |.+|..+++.++ ..|.+|++.+++.++.+...++|....     .+..+.+ +     ..|+|+.|+.
T Consensus       162 ~g~~vgIIG~-G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell-~-----~aDvVil~vp  229 (348)
T 2w2k_A          162 RGHVLGAVGL-GAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERV-----DSLEELA-R-----RSDCVSVSVP  229 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEEC-----SSHHHHH-H-----HCSEEEECCC
T ss_pred             CCCEEEEEEE-CHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEe-----CCHHHHh-c-----cCCEEEEeCC
Confidence            4789999998 999999999999 999999999988766655555564321     1111111 1     4688888876


Q ss_pred             hH-H----H-HHhhccccCCCEEEEEec
Q 020487          218 AS-Y----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       218 ~~-~----~-~~~~~~l~~~g~~v~~g~  239 (325)
                      .. .    + ...+..|+++..++.++.
T Consensus       230 ~~~~t~~li~~~~l~~mk~gailin~sr  257 (348)
T 2w2k_A          230 YMKLTHHLIDEAFFAAMKPGSRIVNTAR  257 (348)
T ss_dssp             CSGGGTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             CChHHHHHhhHHHHhcCCCCCEEEECCC
Confidence            42 1    1 234566777777776543

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=95.42  E-value=0.19  Score=43.81  Aligned_cols=92  Identities=13%  Similarity=0.163  Sum_probs=62.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC----hhh---------HHHHHHcCCCEEEeCCCchHHHHHHHHh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGS----EEK---------LAVCKDLGADVCINYKTEDFVARVKEET  204 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~----~~~---------~~~~~~~g~~~~~~~~~~~~~~~~~~~~  204 (325)
                      ++.+|+|.|+ |..|..+++++..+|+ +|++++++    .++         ..++++...    ......    +.+..
T Consensus       191 ~~~kVVv~GA-GaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~----~~~~~~----L~eav  261 (388)
T 1vl6_A          191 EEVKVVVNGI-GAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP----ERLSGD----LETAL  261 (388)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT----TCCCSC----HHHHH
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc----cCchhh----HHHHH
Confidence            4678999999 9999999999999999 89999977    443         222333211    011222    33333


Q ss_pred             CCCcccEEEeCCChHH-HHHhhccccCCCEEEEEeccC
Q 020487          205 GGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       205 ~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      .  ++|++|-+++... ....++.|+++.-++.+..+.
T Consensus       262 ~--~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNPt  297 (388)
T 1vl6_A          262 E--GADFFIGVSRGNILKPEWIKKMSRKPVIFALANPV  297 (388)
T ss_dssp             T--TCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSS
T ss_pred             c--cCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCCC
Confidence            3  5799999988433 367788898888666665544

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.41  E-value=0.049  Score=45.87  Aligned_cols=85  Identities=13%  Similarity=0.018  Sum_probs=58.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH-H
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-Y  220 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~  220 (325)
                      +|.|+|. |.+|...++.+...|.+|++.++++++.+.+.+.|... .    .+..+.+ +     ..|+||-|+... .
T Consensus         3 ~I~iiG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-~----~~~~~~~-~-----~advvi~~v~~~~~   70 (287)
T 3pdu_A            3 TYGFLGL-GIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQ-A----SSPAEVC-A-----ACDITIAMLADPAA   70 (287)
T ss_dssp             CEEEECC-STTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEE-C----SCHHHHH-H-----HCSEEEECCSSHHH
T ss_pred             eEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee-c----CCHHHHH-H-----cCCEEEEEcCCHHH
Confidence            5889997 99999999988888999999999999888887766532 1    1111111 1     468999988864 4


Q ss_pred             HHHhh-------ccccCCCEEEEEe
Q 020487          221 FQRNL-------GSLNIDGRLFIIG  238 (325)
Q Consensus       221 ~~~~~-------~~l~~~g~~v~~g  238 (325)
                      +...+       ..++++..++.++
T Consensus        71 ~~~v~~~~~~l~~~l~~g~~vv~~s   95 (287)
T 3pdu_A           71 AREVCFGANGVLEGIGGGRGYIDMS   95 (287)
T ss_dssp             HHHHHHSTTCGGGTCCTTCEEEECS
T ss_pred             HHHHHcCchhhhhcccCCCEEEECC
Confidence            44333       3455666666553

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=95.41  E-value=0.066  Score=45.15  Aligned_cols=96  Identities=16%  Similarity=0.012  Sum_probs=66.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCC---CEEEeCCCchHHHHHHHHhCCCc
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA---DVCINYKTEDFVARVKEETGGKG  208 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~---~~~~~~~~~~~~~~~~~~~~~~~  208 (325)
                      .+.++.+||-+|+ | .|..+..+++..|++|+.++.++...+.+++    .|.   -.+...+.....      .....
T Consensus        79 ~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~  150 (297)
T 2o57_A           79 VLQRQAKGLDLGA-G-YGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP------CEDNS  150 (297)
T ss_dssp             CCCTTCEEEEETC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS------SCTTC
T ss_pred             CCCCCCEEEEeCC-C-CCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC------CCCCC
Confidence            7789999999997 3 6888888888878999999999887766653    232   122222221110      12346


Q ss_pred             ccEEEeCCCh-------HHHHHhhccccCCCEEEEEec
Q 020487          209 VDVILDCMGA-------SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       209 ~d~vi~~~g~-------~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ||+|+....-       ..+..+.+.|+|||+++....
T Consensus       151 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~  188 (297)
T 2o57_A          151 YDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  188 (297)
T ss_dssp             EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence            9999875432       336778899999999988754

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.40  E-value=0.018  Score=47.07  Aligned_cols=94  Identities=15%  Similarity=0.071  Sum_probs=63.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcC----CC-EEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG----AD-VCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g----~~-~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      .+|.+||-+|+  +.|..+..+++..+.++++++.++.-.+.+++..    .. .++..+    +..+........||.|
T Consensus        59 ~~G~rVLdiG~--G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~----a~~~~~~~~~~~FD~i  132 (236)
T 3orh_A           59 SKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL----WEDVAPTLPDGHFDGI  132 (236)
T ss_dssp             TTCEEEEEECC--TTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESC----HHHHGGGSCTTCEEEE
T ss_pred             cCCCeEEEECC--CccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeeh----HHhhcccccccCCceE
Confidence            67899999997  3688888888877789999999998888877532    11 122211    1222223344579887


Q ss_pred             -EeCCCh-----------HHHHHhhccccCCCEEEEE
Q 020487          213 -LDCMGA-----------SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       213 -i~~~g~-----------~~~~~~~~~l~~~g~~v~~  237 (325)
                       +|+...           ..+..+.+.|+|||+++.+
T Consensus       133 ~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~  169 (236)
T 3orh_A          133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  169 (236)
T ss_dssp             EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             EEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence             454421           1246678899999999875

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=95.39  E-value=0.074  Score=40.59  Aligned_cols=98  Identities=14%  Similarity=0.117  Sum_probs=62.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHHcCCCEEEeCCCch--HHHHHHHHhCCCcccE
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVCINYKTED--FVARVKEETGGKGVDV  211 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~  211 (325)
                      .++++++||-+|+ |. |..+..+++..  +.++++++.++ ..+    ...-.++..+...  ....+........||+
T Consensus        19 ~~~~~~~vLd~G~-G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~   91 (180)
T 1ej0_A           19 LFKPGMTVVDLGA-AP-GGWSQYVVTQIGGKGRIIACDLLP-MDP----IVGVDFLQGDFRDELVMKALLERVGDSKVQV   91 (180)
T ss_dssp             CCCTTCEEEEESC-TT-CHHHHHHHHHHCTTCEEEEEESSC-CCC----CTTEEEEESCTTSHHHHHHHHHHHTTCCEEE
T ss_pred             CCCCCCeEEEeCC-CC-CHHHHHHHHHhCCCCeEEEEECcc-ccc----cCcEEEEEcccccchhhhhhhccCCCCceeE
Confidence            3688999999997 44 88888888875  47999999776 322    1111233323222  2223333345557999


Q ss_pred             EEeC-----CCh-------------HHHHHhhccccCCCEEEEEecc
Q 020487          212 ILDC-----MGA-------------SYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       212 vi~~-----~g~-------------~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      |+..     .+.             ..+..+.+.|+++|.++.....
T Consensus        92 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  138 (180)
T 1ej0_A           92 VMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ  138 (180)
T ss_dssp             EEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred             EEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence            9973     222             3356677889999999976543

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.39  E-value=0.078  Score=42.76  Aligned_cols=98  Identities=17%  Similarity=0.139  Sum_probs=64.3

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCC-CEEEeCCCchHHHHHHHHhCCCcc
Q 020487          135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA-DVCINYKTEDFVARVKEETGGKGV  209 (325)
Q Consensus       135 ~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~-~~~~~~~~~~~~~~~~~~~~~~~~  209 (325)
                      ..++++++||-.|+ |..|..+..+++..+.+|++++.++...+.+++    .+. -.++..+...+.    . .....|
T Consensus        51 ~~~~~~~~vLDlG~-G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~----~-~~~~~f  124 (230)
T 3evz_A           51 TFLRGGEVALEIGT-GHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIK----G-VVEGTF  124 (230)
T ss_dssp             TTCCSSCEEEEECC-TTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSST----T-TCCSCE
T ss_pred             hhcCCCCEEEEcCC-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhh----h-cccCce
Confidence            34678999999997 435777777777668899999999987776653    332 233333321110    0 112479


Q ss_pred             cEEEeCCC--------------------------hHHHHHhhccccCCCEEEEEe
Q 020487          210 DVILDCMG--------------------------ASYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       210 d~vi~~~g--------------------------~~~~~~~~~~l~~~g~~v~~g  238 (325)
                      |+|+....                          ...+..+.+.|+|+|+++.+-
T Consensus       125 D~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  179 (230)
T 3evz_A          125 DVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYL  179 (230)
T ss_dssp             EEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             eEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEe
Confidence            99995421                          233567788899999998863

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=95.38  E-value=0.026  Score=47.90  Aligned_cols=73  Identities=14%  Similarity=0.035  Sum_probs=48.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHHcCCCEE-EeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .+|||+|++|.+|..+++.+...  |.+|++++++..+.....  +...+ .|..+.   +.+.+.....++|+||.+++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~D~~d~---~~~~~~~~~~~~d~vih~a~   77 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN--SGPFEVVNALDF---NQIEHLVEVHKITDIYLMAA   77 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHH--SSCEEECCTTCH---HHHHHHHHHTTCCEEEECCC
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccC--CCceEEecCCCH---HHHHHHHhhcCCCEEEECCc
Confidence            57999999999999999888877  889999998765533222  22222 232232   22333332226899999987


Q ss_pred             h
Q 020487          218 A  218 (325)
Q Consensus       218 ~  218 (325)
                      .
T Consensus        78 ~   78 (312)
T 2yy7_A           78 L   78 (312)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=95.37  E-value=0.078  Score=43.65  Aligned_cols=34  Identities=24%  Similarity=0.243  Sum_probs=30.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSE  174 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~  174 (325)
                      +.+|+|.|+ |++|..+++.+...|+ +++++++..
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            468999998 9999999999999998 888888765

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=95.37  E-value=0.014  Score=50.00  Aligned_cols=98  Identities=22%  Similarity=0.156  Sum_probs=65.9

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHHH----cCCCE--EEeCCCchHHHHHHHHh
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGADV--CINYKTEDFVARVKEET  204 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~~  204 (325)
                      ....++++++||-+|+ |. |..+..+++..+  .+|+.++.+++..+.+++    .|...  +...+.....      .
T Consensus        69 ~~l~~~~~~~VLDiGc-G~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~------~  140 (317)
T 1dl5_A           69 EWVGLDKGMRVLEIGG-GT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV------P  140 (317)
T ss_dssp             HHTTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC------G
T ss_pred             HhcCCCCcCEEEEecC-Cc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcc------c
Confidence            5567889999999997 43 888888887643  479999999988777653    34332  2222221100      0


Q ss_pred             CCCcccEEEeCCChHHH-HHhhccccCCCEEEEEe
Q 020487          205 GGKGVDVILDCMGASYF-QRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       205 ~~~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~g  238 (325)
                      ....||+|+.......+ ..+.+.|+|+|+++..-
T Consensus       141 ~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          141 EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             cCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence            12369999987664432 56678899999998763

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=95.35  E-value=0.11  Score=43.13  Aligned_cols=96  Identities=13%  Similarity=0.013  Sum_probs=65.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHHhCCCc
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEETGGKG  208 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~~~~  208 (325)
                      .+.++.+||-+|+ | .|..+..+++..+.+|++++.++...+.+++    .+..   .++..+...+.      .....
T Consensus        43 ~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~~  114 (267)
T 3kkz_A           43 NLTEKSLIADIGC-G-TGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP------FRNEE  114 (267)
T ss_dssp             CCCTTCEEEEETC-T-TCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC------CCTTC
T ss_pred             cCCCCCEEEEeCC-C-CCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC------CCCCC
Confidence            4788999999997 3 5888888888866699999999987776653    3321   22322222110      12347


Q ss_pred             ccEEEeCCCh------HHHHHhhccccCCCEEEEEec
Q 020487          209 VDVILDCMGA------SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       209 ~d~vi~~~g~------~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ||+|+....-      ..+..+.+.|+|||+++....
T Consensus       115 fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  151 (267)
T 3kkz_A          115 LDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC  151 (267)
T ss_dssp             EEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred             EEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence            9999865432      236778899999999987754

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=95.34  E-value=0.046  Score=45.97  Aligned_cols=82  Identities=12%  Similarity=-0.024  Sum_probs=53.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH-
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-  220 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-  220 (325)
                      +|.|+|+ |.+|...+..+.. |.+|++.++++++.+.+.+.|.... + ..        +..  ..+|+|+.|+.... 
T Consensus         3 ~i~iiG~-G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~-~-~~--------~~~--~~~D~vi~~v~~~~~   68 (289)
T 2cvz_A            3 KVAFIGL-GAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEA-V-PL--------ERV--AEARVIFTCLPTTRE   68 (289)
T ss_dssp             CEEEECC-STTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEE-C-CG--------GGG--GGCSEEEECCSSHHH
T ss_pred             eEEEEcc-cHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCccc-C-HH--------HHH--hCCCEEEEeCCChHH
Confidence            5889998 9999998888888 9999999999888777765554321 1 11        111  14688888877543 


Q ss_pred             HHHh----hccccCCCEEEEE
Q 020487          221 FQRN----LGSLNIDGRLFII  237 (325)
Q Consensus       221 ~~~~----~~~l~~~g~~v~~  237 (325)
                      +...    ...++++..++.+
T Consensus        69 ~~~v~~~l~~~l~~~~~vv~~   89 (289)
T 2cvz_A           69 VYEVAEALYPYLREGTYWVDA   89 (289)
T ss_dssp             HHHHHHHHTTTCCTTEEEEEC
T ss_pred             HHHHHHHHHhhCCCCCEEEEC
Confidence            3332    2345555555544

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=95.33  E-value=0.017  Score=50.20  Aligned_cols=76  Identities=14%  Similarity=0.098  Sum_probs=45.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCh--hhHHHHHHc--CCC-EEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSE--EKLAVCKDL--GAD-VCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~--~~~~~~~~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      +|||+|++|.+|..+++.+... |++|++++++.  .+.+.+.++  +.. ..+..+-.+ .+.+.+.....++|+||.+
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD-SAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTC-HHHHHHHHHHHCCSEEEEC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCC-HHHHHHHHhhcCCCEEEEC
Confidence            5999999999999999888776 78999998754  122222222  111 222222211 1222222211268999999


Q ss_pred             CCh
Q 020487          216 MGA  218 (325)
Q Consensus       216 ~g~  218 (325)
                      ++.
T Consensus        81 A~~   83 (361)
T 1kew_A           81 AAE   83 (361)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            873

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.33  E-value=0.075  Score=45.88  Aligned_cols=86  Identities=16%  Similarity=0.212  Sum_probs=61.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .+.+|.|+|. |.+|..+++.++..|.+|++.+++.++ +...+.|.. .   .  +..+.+ +     ..|+|+.|++.
T Consensus       149 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~-~---~--~l~~~l-~-----~aDvVil~vp~  214 (334)
T 2dbq_A          149 YGKTIGIIGL-GRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAE-F---K--PLEDLL-R-----ESDFVVLAVPL  214 (334)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCE-E---C--CHHHHH-H-----HCSEEEECCCC
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCcc-c---C--CHHHHH-h-----hCCEEEECCCC
Confidence            4679999998 999999999999999999999988776 555556642 1   1  121112 1     47999988875


Q ss_pred             HH-----H-HHhhccccCCCEEEEEe
Q 020487          219 SY-----F-QRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       219 ~~-----~-~~~~~~l~~~g~~v~~g  238 (325)
                      ..     + ...+..|+++..++.++
T Consensus       215 ~~~t~~~i~~~~~~~mk~~ailIn~s  240 (334)
T 2dbq_A          215 TRETYHLINEERLKLMKKTAILINIA  240 (334)
T ss_dssp             CTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred             ChHHHHhhCHHHHhcCCCCcEEEECC
Confidence            32     1 24456788888887765

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=95.32  E-value=0.13  Score=44.02  Aligned_cols=84  Identities=11%  Similarity=-0.029  Sum_probs=53.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCh-------hhHHHHHHcCCCEEEe-CCCchHHHHHHHHhCCCcccE
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSE-------EKLAVCKDLGADVCIN-YKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~-------~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      .+|.|+|. |.+|...+..+...| .+|++.++++       +..+.+.+.|.   .. ...+..          +..|+
T Consensus        25 m~IgvIG~-G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~---~~~s~~e~~----------~~aDv   90 (317)
T 4ezb_A           25 TTIAFIGF-GEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV---EPLDDVAGI----------ACADV   90 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC---EEESSGGGG----------GGCSE
T ss_pred             CeEEEECc-cHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC---CCCCHHHHH----------hcCCE
Confidence            57999998 999999999999999 8999999886       34455555555   11 111110          14677


Q ss_pred             EEeCCChHH----HHHhhccccCCCEEEEEe
Q 020487          212 ILDCMGASY----FQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       212 vi~~~g~~~----~~~~~~~l~~~g~~v~~g  238 (325)
                      ||-|+....    +..+...++++..++.++
T Consensus        91 Vi~avp~~~~~~~~~~i~~~l~~~~ivv~~s  121 (317)
T 4ezb_A           91 VLSLVVGAATKAVAASAAPHLSDEAVFIDLN  121 (317)
T ss_dssp             EEECCCGGGHHHHHHHHGGGCCTTCEEEECC
T ss_pred             EEEecCCHHHHHHHHHHHhhcCCCCEEEECC
Confidence            777776543    233344455555555543

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=95.32  E-value=0.012  Score=51.19  Aligned_cols=74  Identities=16%  Similarity=0.219  Sum_probs=46.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHHHcC-CCEEEeCCCchHHHHHHHHhCC---CcccEEEe
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLG-ADVCINYKTEDFVARVKEETGG---KGVDVILD  214 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~---~~~d~vi~  214 (325)
                      +.+|||+|++|.+|..+++.+...| .+|+++.++..... ...+. .....|..+   .+.+.+...+   .++|+||.
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~d~~~---~~~~~~~~~~~~~~~~d~Vih  121 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNLVDLNIADYMDK---EDFLIQIMAGEEFGDVEAIFH  121 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GGGTTTSCCSEEEEH---HHHHHHHHTTCCCSSCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hhcccCceEeeecCc---HHHHHHHHhhcccCCCCEEEE
Confidence            5679999999999999999998899 89999998755421 11111 111111111   2233344332   26899999


Q ss_pred             CCC
Q 020487          215 CMG  217 (325)
Q Consensus       215 ~~g  217 (325)
                      +++
T Consensus       122 ~A~  124 (357)
T 2x6t_A          122 EGA  124 (357)
T ss_dssp             CCS
T ss_pred             CCc
Confidence            987

>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*

Probab=95.31  E-value=0.025  Score=49.63  Aligned_cols=79  Identities=14%  Similarity=0.186  Sum_probs=58.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV---RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~---~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      +.-+|+|+|+.|.+|+.++++++.+|+   .|.+.+.+....      |..  +        +.+.      .+|++|+|
T Consensus       213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~------g~~--~--------~~i~------~aDivIn~  270 (394)
T 2qrj_A          213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSR------GGP--F--------DEIP------QADIFINC  270 (394)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTT------CSC--C--------THHH------HSSEEEEC
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccccc------CCc--h--------hhHh------hCCEEEEC
Confidence            456789999999999999999999998   898888654221      332  0        1121      57999999


Q ss_pred             CCh----HH--HHHhhccc-cCCCEEEEEec
Q 020487          216 MGA----SY--FQRNLGSL-NIDGRLFIIGT  239 (325)
Q Consensus       216 ~g~----~~--~~~~~~~l-~~~g~~v~~g~  239 (325)
                      +--    +.  ....++.+ +++..+|++..
T Consensus       271 vlig~~aP~Lvt~e~v~~m~k~gsVIVDVA~  301 (394)
T 2qrj_A          271 IYLSKPIAPFTNMEKLNNPNRRLRTVVDVSA  301 (394)
T ss_dssp             CCCCSSCCCSCCHHHHCCTTCCCCEEEETTC
T ss_pred             cCcCCCCCcccCHHHHhcCcCCCeEEEEEec
Confidence            752    11  36778899 99999998843

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=95.31  E-value=0.13  Score=43.21  Aligned_cols=86  Identities=13%  Similarity=-0.071  Sum_probs=55.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHHcCCC-EEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .+|.|+|+ |.+|...+..+...  |.+|++.++++++.+.+.+.|.. ..........          ...|+||-|+.
T Consensus         7 ~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~----------~~aDvVilavp   75 (290)
T 3b1f_A            7 KTIYIAGL-GLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFA----------ALADVIILAVP   75 (290)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTG----------GGCSEEEECSC
T ss_pred             ceEEEEee-CHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhh----------cCCCEEEEcCC
Confidence            57999997 99999998887766  67999999998888877776653 2221111111          14688888887


Q ss_pred             hHHHHHh----hcc-ccCCCEEEEE
Q 020487          218 ASYFQRN----LGS-LNIDGRLFII  237 (325)
Q Consensus       218 ~~~~~~~----~~~-l~~~g~~v~~  237 (325)
                      .......    ... ++++..++.+
T Consensus        76 ~~~~~~v~~~l~~~~l~~~~ivi~~  100 (290)
T 3b1f_A           76 IKKTIDFIKILADLDLKEDVIITDA  100 (290)
T ss_dssp             HHHHHHHHHHHHTSCCCTTCEEECC
T ss_pred             HHHHHHHHHHHHhcCCCCCCEEEEC
Confidence            6543332    233 4444444433

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=95.30  E-value=0.097  Score=45.45  Aligned_cols=94  Identities=15%  Similarity=0.099  Sum_probs=59.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeC------CCchHHHHHHHHhCCCcccEEEe
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY------KTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      .+|+|+|+ |.+|...+..+...|.+|+++++++++.+.+++.+.-.+...      ..........+..  ..+|+||-
T Consensus         5 mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~D~vi~   81 (359)
T 1bg6_A            5 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV--KDADVILI   81 (359)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH--TTCSEEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHH--hcCCEEEE
Confidence            47999998 999999998888889999999999888877765421111100      0000001122222  26899999


Q ss_pred             CCChHHHHH----hhccccCCCEEEEE
Q 020487          215 CMGASYFQR----NLGSLNIDGRLFII  237 (325)
Q Consensus       215 ~~g~~~~~~----~~~~l~~~g~~v~~  237 (325)
                      |+.......    +...++++..++..
T Consensus        82 ~v~~~~~~~~~~~l~~~l~~~~~vv~~  108 (359)
T 1bg6_A           82 VVPAIHHASIAANIASYISEGQLIILN  108 (359)
T ss_dssp             CSCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred             eCCchHHHHHHHHHHHhCCCCCEEEEc
Confidence            998755433    33445666656655

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.29  E-value=0.095  Score=47.23  Aligned_cols=94  Identities=13%  Similarity=0.147  Sum_probs=58.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      +.+|+|+|+ |.+|..+++.+...|++|++++++.++.+.+.+ ++....+..+..+ .+.+.+...  ++|+|++|++.
T Consensus         3 ~k~VlViGa-G~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d-~~~l~~~l~--~~DvVIn~a~~   78 (450)
T 1ff9_A            3 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVND-DAALDAEVA--KHDLVISLIPY   78 (450)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTC-HHHHHHHHT--TSSEEEECCC-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCC-HHHHHHHHc--CCcEEEECCcc
Confidence            568999985 999999999988889999999998876654432 3321222222222 223444443  69999999986


Q ss_pred             HH-HHHhhccccCCCEEEEE
Q 020487          219 SY-FQRNLGSLNIDGRLFII  237 (325)
Q Consensus       219 ~~-~~~~~~~l~~~g~~v~~  237 (325)
                      .. ......++.++-.++..
T Consensus        79 ~~~~~i~~a~l~~g~~vvd~   98 (450)
T 1ff9_A           79 TFHATVIKSAIRQKKHVVTT   98 (450)
T ss_dssp             -CHHHHHHHHHHHTCEEEES
T ss_pred             ccchHHHHHHHhCCCeEEEe
Confidence            32 22233455555555543

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.27  E-value=0.24  Score=42.85  Aligned_cols=86  Identities=14%  Similarity=0.174  Sum_probs=60.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh-
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-  218 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-  218 (325)
                      |.++.|+|. |.+|..+++.++..|++|++..++....+...  +... .    .++    .+...  ..|+|+-++.. 
T Consensus       173 gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g~~~-~----~~l----~ell~--~sDvV~l~~Plt  238 (345)
T 4g2n_A          173 GRRLGIFGM-GRIGRAIATRARGFGLAIHYHNRTRLSHALEE--GAIY-H----DTL----DSLLG--ASDIFLIAAPGR  238 (345)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--TCEE-C----SSH----HHHHH--TCSEEEECSCCC
T ss_pred             CCEEEEEEe-ChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--CCeE-e----CCH----HHHHh--hCCEEEEecCCC
Confidence            679999998 99999999999999999999998764443222  4322 1    111    22221  57999988873 


Q ss_pred             HH----H-HHhhccccCCCEEEEEec
Q 020487          219 SY----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 ~~----~-~~~~~~l~~~g~~v~~g~  239 (325)
                      +.    + ...+..|+++..+|.++.
T Consensus       239 ~~T~~li~~~~l~~mk~gailIN~aR  264 (345)
T 4g2n_A          239 PELKGFLDHDRIAKIPEGAVVINISR  264 (345)
T ss_dssp             GGGTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             HHHHHHhCHHHHhhCCCCcEEEECCC
Confidence            21    2 455778899999988764

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=95.26  E-value=0.018  Score=50.60  Aligned_cols=36  Identities=14%  Similarity=0.137  Sum_probs=32.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK  176 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~  176 (325)
                      .+|||+|++|.+|..+++.+...|++|++++++..+
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~   64 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSN   64 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCcc
Confidence            579999999999999999999999999999987653

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=95.26  E-value=0.033  Score=47.90  Aligned_cols=76  Identities=24%  Similarity=0.165  Sum_probs=47.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChh--hHHHHHHc--CCC-EEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEE--KLAVCKDL--GAD-VCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~--~~~~~~~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      +.+|||+|++|.+|..++..+...|  ++|+++++...  +.+.++++  +.. ..+..+-.+ .+.+.+..  .++|+|
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~--~~~d~v   79 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVAD-YELVKELV--RKVDGV   79 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTC-HHHHHHHH--HTCSEE
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCC-HHHHHHHh--hCCCEE
Confidence            4579999999999999998887776  89999987531  12222222  111 222222222 22334444  368999


Q ss_pred             EeCCCh
Q 020487          213 LDCMGA  218 (325)
Q Consensus       213 i~~~g~  218 (325)
                      |.+++.
T Consensus        80 ih~A~~   85 (336)
T 2hun_A           80 VHLAAE   85 (336)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	325
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	2e-29
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	3e-26
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	9e-26
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	3e-24
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	4e-24
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	9e-24
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	2e-23
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	1e-22
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	4e-22
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	6e-22
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	8e-22
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	2e-21
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	4e-21
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	6e-21
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	2e-19
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	8e-19
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	3e-18
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	6e-18
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	7e-18
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	8e-18
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	2e-17
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	9e-17
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	1e-16
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	2e-16
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	8e-16
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	1e-15
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	1e-15
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	3e-15
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	4e-15
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	4e-15
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	6e-15
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	3e-14
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	3e-14
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	5e-14
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	7e-14
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	1e-13
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	1e-13
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	5e-13
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	7e-13
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	9e-13
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	2e-12
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	2e-12
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	9e-12
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	1e-11
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	3e-11
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	7e-11
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	2e-10
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	7e-10
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	1e-09
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	2e-09
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	6e-09
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-08
d1v3va1	147	b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd	9e-06
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	5e-05
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	5e-04
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	7e-04
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	0.001
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	0.001
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.003
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	0.004
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	0.004

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  108 bits (271), Expect = 2e-29
 Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 1/180 (0%)

Query: 116 DAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175
           +AA F     T W ++     LSPGE  L+H  + G+G  A+ + K  G R++ TAGS+ 
Sbjct: 2   EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA 61

Query: 176 KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235
           K  +   LG +   + ++ DF   + E T G GVDV+L+ +     QR +  L   GR  
Sbjct: 62  KREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFI 121

Query: 236 IIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV 295
            +G +          +  AK  +     L        A    ++ +++   +A GK++ +
Sbjct: 122 ELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARY-RQLLQHILQHVADGKLEVL 180

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score =   99 bits (248), Expect = 3e-26
 Identities = 29/153 (18%), Positives = 61/153 (39%), Gaps = 10/153 (6%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            +A V+ +  +     +Q +    + + +VL++V  +++N  D L         K     
Sbjct: 4   FQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFV 63

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCA------LLGGGGYAEKVAVPAGQVLPVPSGVSL 114
           PG++ +G +  V     R++ GD+V A      +   GGY+E   +    ++P+P G+  
Sbjct: 64  PGIDLAGVV--VSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLE- 120

Query: 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
           + A               +   L  G + +   
Sbjct: 121 RIAQEISLAELPQALKRILRGELR-GRTVVRLA 152

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 99.3 bits (246), Expect = 9e-26
 Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 3/180 (1%)

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171
           +S + AAA      TV+  +  T  + P E FL H  + G+G  A Q  K  G ++  T 
Sbjct: 1   ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTV 60

Query: 172 GSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231
           G+ +K       GA   INY+ ED V R+KE TGGK V V+ D +G   ++R+L  L   
Sbjct: 61  GTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRR 120

Query: 232 GRLFIIGTQGGAKTELNITSLFAKR-LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 290
           G +   G   GA T +N+  L  K  L V    L+   T  + L  +E    ++  IA G
Sbjct: 121 GLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREEL--TEASNELFSLIASG 178

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 94.2 bits (233), Expect = 3e-24
 Identities = 26/138 (18%), Positives = 58/138 (42%), Gaps = 8/138 (5%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           ++A+++ Q     +  +Q +++ ++ + +V + V  ++LN  D L   G     +     
Sbjct: 1   LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMI 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGG------GGYAEKVAVPAGQVLPVPSGVSL 114
           PG++ +GT+ +      R+  G +V     G      GG AE+  V    ++ +P G + 
Sbjct: 61  PGIDFAGTVRTSEDP--RFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAA 118

Query: 115 KDAAAFPEVACTVWSTVF 132
           K+ +              
Sbjct: 119 KEISLSEAPNFAEAIINN 136

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 94.2 bits (233), Expect = 4e-24
 Identities = 27/156 (17%), Positives = 55/156 (35%), Gaps = 5/156 (3%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            +A+   +      + ++ +    +  D VLIKV  + +N  D L  K      +     
Sbjct: 4   FQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLI 63

Query: 61  PGLECSGTILSVGKNVSR----WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
            G++ +GT++S                    +   GG +E  +VP   ++P+P  +SLK+
Sbjct: 64  LGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKE 123

Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
           A     +                 +  L +     +
Sbjct: 124 AMVDQLLTIVDREVSLEE-TPGALKDILQNRIQGRV 158

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 93.9 bits (232), Expect = 9e-24
 Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 11/190 (5%)

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIG-TFAIQMGKCQGVRVFVT 170
           +++   A       T +  +     L+PG+ + +  G +     +A Q+GK         
Sbjct: 1   LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISV 60

Query: 171 AGS----EEKLAVCKDLGADVCINYKTEDFVARVKE-----ETGGKGVDVILDCMGASYF 221
                  +E +A  K+LGA   I     +            +  G    + L+C+G    
Sbjct: 61  IRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSS 120

Query: 222 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEK 281
                 LN +G +   G        +  +    K  T     +      NK L  S + +
Sbjct: 121 TGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQ 180

Query: 282 NVWPAIAVGK 291
            +      GK
Sbjct: 181 -IIAWYEEGK 189

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 2/147 (1%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+A+ + + G PEVL+L+ ++  P  KD +VLIKV A  +N  +T  R G+Y        
Sbjct: 3   MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPY 62

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAA 118
            PG + +G I +VG N S +K GD+V       GGYAE        V  +P  +     +
Sbjct: 63  TPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLKPVIGS 122

Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLV 145
            +P           +    + G+  L+
Sbjct: 123 QYPLEKVAEAHENIIHGSGATGKMILL 149

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 90.7 bits (224), Expect = 1e-22
 Identities = 41/173 (23%), Positives = 62/173 (35%), Gaps = 32/173 (18%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+   G+P  L+++EV+ P     +VL+K+EA+ +   D    +G +P        
Sbjct: 6   MKAAVVHAYGAP--LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFI 63

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV-----------CALLGGGGY--------------- 94
           PG E  G + +VG  V+R K GD+V           C     G                 
Sbjct: 64  PGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNG 123

Query: 95  --AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV 145
             AE V      V  +P  V         +    +     M +    G   L 
Sbjct: 124 GYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQ--MRAGQIEGRIVLE 174

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 88.0 bits (217), Expect = 4e-22
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 15/145 (10%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ + G P  L+L ++ +P+ ++ EV+++VEA  LN AD L R G+Y         
Sbjct: 1   MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFI 58

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG+E                 G +  AL+  GG AE+VAVP G +LP+P G  +      
Sbjct: 59  PGMEVV-----------GVVEGRRYAALVPQGGLAERVAVPKGALLPLPEGRPVVGPVFP 107

Query: 121 PEVACTVWSTVFMTSHLSPGESFLV 145
              A   +  +    H   G+  + 
Sbjct: 108 FAEAEAAFRALLDRGHT--GKVVVR 130

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 88.2 bits (217), Expect = 6e-22
 Identities = 31/146 (21%), Positives = 51/146 (34%), Gaps = 3/146 (2%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
             I   + G PEVLQ  E       ++E+ ++ +A  +N  DT  R G YPPP   S   
Sbjct: 2   TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLG 61

Query: 62  GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLK--DAAA 119
                                  V A    G Y+    + A +   +P+ + +   +   
Sbjct: 62  TEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAEQQK 121

Query: 120 FPEVACTVWSTVFMTSHLSPGESFLV 145
           +P         +   S  + G S L+
Sbjct: 122 YPLKDAQRAHEIL-ESRATQGSSLLI 146

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 88.1 bits (217), Expect = 8e-22
 Identities = 27/149 (18%), Positives = 54/149 (36%), Gaps = 2/149 (1%)

Query: 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF 196
                S LV G + G+G  A+ M   +G  V  + G+ E     K LGA   I+ +  D 
Sbjct: 21  SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISRE--DV 78

Query: 197 VARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKR 256
                +    +     +D +G       L  +   G + + G  GG +    +     + 
Sbjct: 79  YDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRG 138

Query: 257 LTVQAAGLRSRSTENKALIVSEVEKNVWP 285
           +++          + +A +   +  ++ P
Sbjct: 139 VSLLGIDSVYCPMDVRAAVWERMSSDLKP 167

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 88.0 bits (217), Expect = 2e-21
 Identities = 34/193 (17%), Positives = 57/193 (29%), Gaps = 51/193 (26%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA V  + G P  L ++E+E    K  EV IK+ ATA+   D     G+ P        
Sbjct: 7   CKAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV-I 63

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCAL-------------------------------- 88
            G   +G + SVG+ V++ K GD V  L                                
Sbjct: 64  LGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP 123

Query: 89  ----------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132
                           +G   ++E   V    V  +   + + +          +     
Sbjct: 124 DGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFE 183

Query: 133 MTSHLSPGESFLV 145
           +        + + 
Sbjct: 184 LMHSGKSIRTVVK 196

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 87.3 bits (215), Expect = 4e-21
 Identities = 33/193 (17%), Positives = 57/193 (29%), Gaps = 51/193 (26%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA V  +   P  L ++E+E      +E+ IK+ AT +   D L          G    
Sbjct: 9   CKAAVAWEANKP--LVIEEIEVDVPHANEIRIKIIATGVCHTD-LYHLFEGKHKDGFPVV 65

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCA--------------------------------- 87
            G E +G + SVG  V+ ++ G++V                                   
Sbjct: 66  LGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMS 125

Query: 88  ---------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132
                           LG   +++   V    V  +   V L +         +V   + 
Sbjct: 126 PKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAID 185

Query: 133 MTSHLSPGESFLV 145
           +  H     + L 
Sbjct: 186 LMKHGKCIRTVLS 198

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.2 bits (212), Expect = 6e-21
 Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 2/171 (1%)

Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172
             K  AA      T +  +  ++ +  GES LVHG S G+G  A Q+ +  G+++  TAG
Sbjct: 2   DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG 61

Query: 173 SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
           +EE   +    GA    N++  +++ ++K+  G KG+D+I++ +      ++L  L+  G
Sbjct: 62  TEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGG 121

Query: 233 RLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV 283
           R+ ++G++G    E+N     AK  ++    L S + E      + ++  +
Sbjct: 122 RVIVVGSRGTI--EINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGM 170

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 82.2 bits (202), Expect = 2e-19
 Identities = 29/181 (16%), Positives = 56/181 (30%), Gaps = 38/181 (20%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            + I I      +  +  + +     D ++ IK+EA  +  +D     G +   K     
Sbjct: 7   FEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMK-MPLV 65

Query: 61  PGLECSGTILSVG-KNVSRWKVGDQVCA-------------------------------- 87
            G E  G ++ +G K+ S  KVG +V                                  
Sbjct: 66  VGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPY 125

Query: 88  ---LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFL 144
               +  GGYA  V V    V+P+P  + ++            +  +     +    + +
Sbjct: 126 EDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERM-EKGDVRYRFTLV 184

Query: 145 V 145
            
Sbjct: 185 G 185

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 80.3 bits (197), Expect = 8e-19
 Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 1/150 (0%)

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171
           V ++          T          ++P  SF+  G  +   +  +    C    +    
Sbjct: 1   VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVD 60

Query: 172 GSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231
             E +L + K LGA   IN KT+D VA +KE T G     +         ++ + +L I 
Sbjct: 61  IVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL 120

Query: 232 GRLFIIG-TQGGAKTELNITSLFAKRLTVQ 260
           G++ ++G  Q G   + ++  L     T+ 
Sbjct: 121 GKIAVVGAPQLGTTAQFDVNDLLLGGKTIL 150

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 78.9 bits (193), Expect = 3e-18
 Identities = 42/175 (24%), Positives = 61/175 (34%), Gaps = 34/175 (19%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ Q   P  L+++EVE P I   EVL++++A  +   D     G +P        
Sbjct: 1   MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCA----------------------------LLGGG 92
           PG E  G +  VG  V+  KVGD+V                                  G
Sbjct: 59  PGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDG 118

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
           GYAE     A  V+ +P    + +     ++         M      G   L   
Sbjct: 119 GYAEYCRAAADYVVKIPDNTII-EVQPLEKINEVFDR---MLKGQINGRVVLTLE 169

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 78.1 bits (191), Expect = 6e-18
 Identities = 40/178 (22%), Positives = 70/178 (39%), Gaps = 11/178 (6%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+ + + G P  L LQE+  P+ K  +VLIKVEA  +  +D   R+G +   +     
Sbjct: 1   MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58

Query: 61  -------PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGV 112
                   G E +G I  VG  V  +  GD V      G G      +    +   P  +
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118

Query: 113 SLKDAAAFPE-VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFV 169
            +    A+ E V    +  ++    + P  +  +    +      ++  K  G +V +
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFKAIGRQVLI 176

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 77.6 bits (190), Expect = 7e-18
 Identities = 30/176 (17%), Positives = 62/176 (35%), Gaps = 5/176 (2%)

Query: 113 SLKDAAAFPEVACTVWSTVFM---TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFV 169
           +LK+A A      T   ++               LV G + G+G+ A+ M   +G  V  
Sbjct: 2   TLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEA 61

Query: 170 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 229
           + G   +    + LGA   +  +  D +A        +     +D +G       L  + 
Sbjct: 62  STGKAAEHDYLRVLGAKEVLARE--DVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMR 119

Query: 230 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWP 285
             G + + G  GGA+    +     + +++          + +  I   +  ++ P
Sbjct: 120 YGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKP 175

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 77.5 bits (189), Expect = 8e-18
 Identities = 27/171 (15%), Positives = 50/171 (29%), Gaps = 13/171 (7%)

Query: 1   MKAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP---- 53
            +A++ TQ G P +VL  Q  E++D  +  +EV++K   + +N +D  Q +G YP     
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63

Query: 54  ----PKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVP 109
                      P        +    +                     +          + 
Sbjct: 64  TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123

Query: 110 SGVSLKDAAAFPEVACTVWSTVF-MTSHLSPGESFLVHG-GSSGIGTFAIQ 158
                +  A       T   ++  +     P       G  +S  G   I 
Sbjct: 124 LPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT 174

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.5 bits (187), Expect = 2e-17
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 36/182 (19%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             ++V+     P  L+L+    P+   +EVL+++ +  +  +D    +            
Sbjct: 8   NLSLVVH---GPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKP 64

Query: 61  --PGLECSGTILSVGKNVSRWKVGDQVCA------------------------LLGGG-- 92
              G E SGT+  VG +V   K GD+V                                 
Sbjct: 65  MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 124

Query: 93  --GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS 150
                      A     +P  V       FP          F T     G   ++    S
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVKPLVTHRFP---LEKALEAFETFKKGLGLKIMLKCDPS 181

Query: 151 GI 152
             
Sbjct: 182 DQ 183

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 75.3 bits (184), Expect = 9e-17
 Identities = 38/207 (18%), Positives = 58/207 (28%), Gaps = 65/207 (31%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA +  + GSP  L ++E+E    K  EV I+V AT +   D                 
Sbjct: 9   CKAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFPVVLG 66

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV---------------------CALLGGGGY----- 94
              EC+G + SVG  V+ +K GD+V                     C  L    Y     
Sbjct: 67  H--ECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQ 124

Query: 95  --------------------------AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW 128
                                     ++   V    +  V     L           ++ 
Sbjct: 125 ELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFESIN 184

Query: 129 STVFMTSHLSPGESFLVHGGSSGIGTF 155
             +     +  G+S         I TF
Sbjct: 185 DAI---DLMKEGKSIRT------ILTF 202

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 74.3 bits (181), Expect = 1e-16
 Identities = 31/178 (17%), Positives = 53/178 (29%), Gaps = 35/178 (19%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP- 59
           + A++         L+L++   P+ K+DEVL+++    +  +D    +            
Sbjct: 3   LSAVLY----KQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDP 58

Query: 60  -YPGLECSGTILSVGKNVSRWKVGDQVCALLGGG-------------------------- 92
              G E SGT++ VGKNV   K GD+V    G                            
Sbjct: 59  MVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPD 118

Query: 93  --GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGG 148
               A      A     +P   ++K                F  +      +  V   
Sbjct: 119 DGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTV-DAFEAARKKADNTIKVMIS 175

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 73.9 bits (180), Expect = 2e-16
 Identities = 24/150 (16%), Positives = 50/150 (33%), Gaps = 3/150 (2%)

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173
           L+          T + +    + ++ G +  V G      +  +        R+     +
Sbjct: 3   LEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDIN 62

Query: 174 EEKLAVCKDLGADVCINYK-TEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
           ++K A  K++GA  C+N +  +  +  V  E    GVD   + +G         S   + 
Sbjct: 63  KDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEA 122

Query: 233 R--LFIIGTQGGAKTELNITSLFAKRLTVQ 260
                I+G    ++       L     T +
Sbjct: 123 YGVSVIVGVPPDSQNLSMNPMLLLSGRTWK 152

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 72.3 bits (176), Expect = 8e-16
 Identities = 28/150 (18%), Positives = 44/150 (29%), Gaps = 3/150 (2%)

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173
           L           T +     T+ L PG    V G         +        R+     +
Sbjct: 3   LDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDIN 62

Query: 174 EEKLAVCKDLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
           ++K A  K+ GA  CIN +     +  V  E    GVD   +C+G     R        G
Sbjct: 63  KDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG 122

Query: 233 --RLFIIGTQGGAKTELNITSLFAKRLTVQ 260
                ++G     +             T +
Sbjct: 123 WGVSVVVGVAASGEEIATRPFQLVTGRTWK 152

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 72.2 bits (176), Expect = 1e-15
 Identities = 39/203 (19%), Positives = 62/203 (30%), Gaps = 61/203 (30%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA V+ +   P    ++EVE    K  EV IK+ AT + R+D     G+   P      
Sbjct: 9   CKAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAG 66

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCA--------------------------------- 87
              E +G + S+G+ V+  + GD+V                                   
Sbjct: 67  H--EAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124

Query: 88  ---------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132
                           LG   +++   V    V  + +  +L        +     +  F
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHV-LPFEKINEGF 183

Query: 133 MTSHLSPGESFLVHGGSSGIGTF 155
               L  GES         I TF
Sbjct: 184 --DLLRSGESIRT------ILTF 198

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 71.5 bits (174), Expect = 1e-15
 Identities = 36/161 (22%), Positives = 63/161 (39%), Gaps = 5/161 (3%)

Query: 110 SGVSLKDAAAFPEVACTVWSTVFMTS-HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVF 168
           S   L + A   +   T +  V   +  L PG    + G           +       V 
Sbjct: 2   SREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVI 61

Query: 169 VTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN-LGS 227
                EEKL + + LGAD  ++ +  D V +V E T G+GV+V +D +G+          
Sbjct: 62  ALDVKEEKLKLAERLGADHVVDAR-RDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYL 120

Query: 228 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRS 268
           L   GRL I+G  G  +       + +  ++ + + + +  
Sbjct: 121 LGRMGRLIIVGYGG--ELRFPTIRVISSEVSFEGSLVGNYV 159

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 70.7 bits (172), Expect = 3e-15
 Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 11/179 (6%)

Query: 113 SLKDAAAFPEVACTVWSTVFMTSH---LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFV 169
             + A        T    V               +V G S G+G+ A+ +    G +V  
Sbjct: 2   DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVA 61

Query: 170 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 229
            +G E      K LGA   +          ++++     +D +    G     + L  +N
Sbjct: 62  VSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTV----GDKVLAKVLAQMN 117

Query: 230 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALI----VSEVEKNVW 284
             G +   G  GG      +     + + +Q         E +A      V+++ ++ +
Sbjct: 118 YGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQRLVADLPESFY 176

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 70.7 bits (172), Expect = 4e-15
 Identities = 32/208 (15%), Positives = 60/208 (28%), Gaps = 53/208 (25%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKD-------DEVLIKVEATALNRADTLQRKGSYPP 53
            + +V    G    +++Q+++ P+++D         V++KV +T +  +D    +G    
Sbjct: 2   NRGVVYLGSG---KVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA 58

Query: 54  PKGASPYPGL--------------------------------ECSGTILSVGKNVSRWKV 81
             G      +                                 C      V   V+  + 
Sbjct: 59  QVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARA 118

Query: 82  GDQVCALLGGG---GYAEKVAVPAGQ--VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH 136
           G     +  G    G AE V VP     +L +P      +     EV      ++   + 
Sbjct: 119 GGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISL-DDAP 177

Query: 137 LSPGESFLVHGGSSGIGTFAIQMGKCQG 164
              GE       +     F I   K   
Sbjct: 178 RGYGE-----FDAGVPKKFVIDPHKTFS 200

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 69.7 bits (169), Expect = 4e-15
 Identities = 46/177 (25%), Positives = 70/177 (39%), Gaps = 9/177 (5%)

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171
           +S ++AAAFP    T +  +   +   PGE  LV   +  +GT A+Q+ +  G+RV   A
Sbjct: 1   LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAA 59

Query: 172 GSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231
              EKLA+   LGA+    Y                G   ++  +     + +LG L   
Sbjct: 60  SRPEKLALPLALGAEEAATYAEVPE------RAKAWGGLDLVLEVRGKEVEESLGLLAHG 113

Query: 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 288
           GRL  IG   G    +    L  + L V    L     E    +V E    + P + 
Sbjct: 114 GRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGA--LVEEALGFLLPRLG 168

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 69.7 bits (169), Expect = 6e-15
 Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 11/182 (6%)

Query: 106 LPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV 165
           LP+   +        P    T +  +     +  GE+ LV   +  +G+   Q+ K +G 
Sbjct: 1   LPLSLALG---TIGMP--GLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC 55

Query: 166 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL 225
           +V   AGS+EK+A  K +G D   NYKT + +    ++    G D   D +G  +    L
Sbjct: 56  KVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVL 115

Query: 226 GSLNIDGRLFIIGT------QGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEV 279
             +   G++ I G               +  S+  K+L ++   +     + +   + ++
Sbjct: 116 SQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDL 175

Query: 280 EK 281
            K
Sbjct: 176 MK 177

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 67.7 bits (164), Expect = 3e-14
 Identities = 24/149 (16%), Positives = 44/149 (29%), Gaps = 2/149 (1%)

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173
           L           T +     T+ + PG +  V G  +      +        R+     +
Sbjct: 3   LDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLN 62

Query: 174 EEKLAVCKDLGADVCINYKTEDFV-ARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
            +K    K  GA   +N        ++V  +    GVD  L+C+G     RN     + G
Sbjct: 63  PDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKG 122

Query: 233 -RLFIIGTQGGAKTELNITSLFAKRLTVQ 260
             + ++                    T +
Sbjct: 123 WGVSVLVGWTDLHDVATRPIQLIAGRTWK 151

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 67.4 bits (163), Expect = 3e-14
 Identities = 29/174 (16%), Positives = 57/174 (32%), Gaps = 34/174 (19%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKG--SYPPPKGAS 58
           KA  + +   P  L++++V+ P+++   +V++++    +   D    +G           
Sbjct: 1   KAARLHEYNKP--LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLP 58

Query: 59  PYPGLECSGTILSVGKNVSRWKVGDQV---------------------CALLGGGGY--- 94
              G E  G I  V + V   + GD V                     C  L   G    
Sbjct: 59  YTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNID 118

Query: 95  ---AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV 145
              AE +      V+ +P  V ++      +    V   +        G + L+
Sbjct: 119 GGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL--EKGEVLGRAVLI 170

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 67.7 bits (164), Expect = 5e-14
 Identities = 42/195 (21%), Positives = 64/195 (32%), Gaps = 27/195 (13%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           + A V    G+    +LQ ++  Q + DEVL+KV AT +   D + R   YP P  A   
Sbjct: 4   IIAAVTPCKGAD--FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPAVLG 61

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
              E SG I ++G NV+  +VGD V    G  G   +             G +   A + 
Sbjct: 62  H--EGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSE 119

Query: 121 PEVACTVWSTVFMTSHLS-----------------------PGESFLVHGGSSGIGTFAI 157
              A        +  H                         P +  +       I   AI
Sbjct: 120 GNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDEINQAAI 179

Query: 158 QMGKCQGVRVFVTAG 172
              K   ++  +   
Sbjct: 180 DSRKGITLKPIIKIA 194

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (161), Expect = 7e-14
 Identities = 26/151 (17%), Positives = 55/151 (36%), Gaps = 4/151 (2%)

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171
           V+ ++ A    ++  + +       ++ G   LV G         +        +V VT 
Sbjct: 1   VTFEEGALIEPLSVGIHA--CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTD 58

Query: 172 GSEEKLAVCKDLGADVCINYKTEDFVA--RVKEETGGKGVDVILDCMGASYFQRNLGSLN 229
            S  +L+  K++GAD+ +    E      R  E   G   +V ++C GA    +      
Sbjct: 59  LSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYAT 118

Query: 230 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 260
             G   ++   G   T + +     + + ++
Sbjct: 119 RSGGTLVLVGLGSEMTTVPLLHAAIREVDIK 149

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 66.4 bits (161), Expect = 1e-13
 Identities = 25/164 (15%), Positives = 53/164 (32%), Gaps = 19/164 (11%)

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAG 172
           ++D     ++  T +      + + PG +  V  G+  +G  A    +  G   V V   
Sbjct: 1   IRDLTCLSDILPTGYHGAVT-AGVGPGSTVYVA-GAGPVGLAAAASARLLGAAVVIVGDL 58

Query: 173 SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG--------------- 217
           +  +LA  K  G ++           ++    G   VD  +D +G               
Sbjct: 59  NPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEA 118

Query: 218 -ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 260
            A+     +    + G++ I G            +     L+++
Sbjct: 119 PATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIR 162

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 65.4 bits (158), Expect = 1e-13
 Identities = 34/164 (20%), Positives = 52/164 (31%), Gaps = 8/164 (4%)

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171
             L   A       T +S +       PG+   V G         I++    G  V    
Sbjct: 4   EQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLG-HMGIKLAHAMGAHVVAFT 61

Query: 172 GSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC-MGASYFQRNLGSLNI 230
            SE K    K LGAD  +N +  D +A        K  D IL+              L  
Sbjct: 62  TSEAKREAAKALGADEVVNSRNADEMAAHL-----KSFDFILNTVAAPHNLDDFTTLLKR 116

Query: 231 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKAL 274
           DG + ++G          + +L  KR  +  + +       + L
Sbjct: 117 DGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEML 160

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 64.2 bits (155), Expect = 5e-13
 Identities = 23/165 (13%), Positives = 51/165 (30%), Gaps = 40/165 (24%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           +KA+       P  L+  ++   +   ++V I++    +  +D  Q +  +         
Sbjct: 1   IKAVGAYSAKQP--LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP 58

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV-------------------------CALLGGG--- 92
              E  G +++VG  V ++  GD V                                   
Sbjct: 59  GH-EIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTP 117

Query: 93  --------GYAEKVAVPAGQVLPVP-SGVSLKDAAAFPEVACTVW 128
                   GY++++ V    VL +  + + +  A    E    + 
Sbjct: 118 DEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERML 162

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 63.7 bits (154), Expect = 7e-13
 Identities = 22/188 (11%), Positives = 47/188 (25%), Gaps = 52/188 (27%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             A+V+ +   P  L  +E E   I    +L+++ +  +  +D    +G  P        
Sbjct: 5   AHAMVLEKFNQP--LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIIL 62

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVC------------------------------ALLG 90
              E +G ++ V                                             + G
Sbjct: 63  GH-EGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYG 121

Query: 91  -----------GGGYAEKVAV-PAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS 138
                       G Y+  + + P   VL V   ++        E    +           
Sbjct: 122 INRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKIT--HRLPLKEANKAL-----ELMESR 174

Query: 139 PGESFLVH 146
                +++
Sbjct: 175 EALKVILY 182

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 63.3 bits (153), Expect = 9e-13
 Identities = 32/149 (21%), Positives = 56/149 (37%), Gaps = 5/149 (3%)

Query: 116 DAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-E 174
           ++        T +     T+ ++PG +  V  G  G+G  AI   K  G    +  G+ +
Sbjct: 4   ESCLIGCGFATGYGAAVNTAKVTPGSTCAVF-GLGGVGFSAIVGCKAAGASRIIGVGTHK 62

Query: 175 EKLAVCKDLGADVCINYKTEDF-VARVKEETGGKGVDVILDCMGASYFQRN--LGSLNID 231
           +K     +LGA  C+N K  D  +  V  E    GVD  ++C G      N    +    
Sbjct: 63  DKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGS 122

Query: 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQ 260
           G   ++G     +       L     +++
Sbjct: 123 GVTVVLGLASPNERLPLDPLLLLTGRSLK 151

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 59.6 bits (144), Expect = 2e-12
 Identities = 17/76 (22%), Positives = 25/76 (32%), Gaps = 3/76 (3%)

Query: 113 SLKDAAAFPEVACTVWSTVF---MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFV 169
             + A        T    V               +V G S G+G+ A+ +    G +V  
Sbjct: 2   DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVA 61

Query: 170 TAGSEEKLAVCKDLGA 185
            +G E      K LGA
Sbjct: 62  VSGRESTHEYLKSLGA 77

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 62.6 bits (151), Expect = 2e-12
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 1  MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           KA V  +P  P  L L+ +     K  EV IK+ A+ +  +D+   K   P        
Sbjct: 9  CKAAVAWEPHKP--LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKF--PVI 64

Query: 61 PGLECSGTILSVGKNVSRWKVGDQVC 86
           G E  G + S+G  V+  K GD+V 
Sbjct: 65 LGHEAVGVVESIGAGVTCVKPGDKVI 90

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 60.7 bits (146), Expect = 9e-12
 Identities = 24/167 (14%), Positives = 43/167 (25%), Gaps = 6/167 (3%)

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG-GSSGIGTFAIQMGKCQGVRVFVTAG 172
           L   A       T +           G++ ++ G G  G+    I         + +   
Sbjct: 3   LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62

Query: 173 SEEKLAVCKDLGADVCI--NYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLN 229
                   +              E+    + + T G+G D IL+  G           L 
Sbjct: 63  PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122

Query: 230 IDGRLFIIGTQGGAKT-ELNI-TSLFAKRLTVQAAGLRSRSTENKAL 274
             G   + G           +   L  K  T +   +   S   K +
Sbjct: 123 RGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTV 169

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 59.9 bits (144), Expect = 1e-11
 Identities = 31/169 (18%), Positives = 55/169 (32%), Gaps = 7/169 (4%)

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVF-VT 170
           + L++A    ++  T +      + +  G S +V  G   +G   I   K +G       
Sbjct: 1   MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVI-GIGAVGLMGIAGAKLRGAGRIIGV 58

Query: 171 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLN 229
                 +   K  GA   +NYK      +V + T GKGVD ++   G S    + +  + 
Sbjct: 59  GSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVK 118

Query: 230 IDGRLFIIGTQGGAKT---ELNITSLFAKRLTVQAAGLRSRSTENKALI 275
             G +  I   G                   T++           + L 
Sbjct: 119 PGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAERLR 167

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 58.8 bits (141), Expect = 3e-11
 Identities = 26/192 (13%), Positives = 49/192 (25%), Gaps = 48/192 (25%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MK   +        L   E E P     + +++  A +   +D           +  +  
Sbjct: 1   MKGFAMLGINK---LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDR-KNMI 56

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLG------------------------------ 90
            G E  G ++ VG  V  +K GD+V                                   
Sbjct: 57  LGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFK 116

Query: 91  GGGYAEKVAVPAGQ--VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG- 147
            G + E   V      +  +P  V L             +  +         E+ L+   
Sbjct: 117 DGVFGEYFHVNDADMNLAILPKDVDLSKLVT---HVYHGFDHI--------EEALLLMKD 165

Query: 148 GSSGIGTFAIQM 159
               +    + +
Sbjct: 166 KPKDLIKAVVIL 177

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 57.8 bits (138), Expect = 7e-11
 Identities = 28/158 (17%), Positives = 52/158 (32%), Gaps = 4/158 (2%)

Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG-IGTFAIQMGKCQGVRVFVTA 171
           +  +AA       T +  V   + L P ++ LV G   G             G  +    
Sbjct: 2   NAVEAAPLTCSGITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD 60

Query: 172 GSEEKLAVCKDLGADVCINYKTEDFVARVKEE-TGGKGVDVILDCMGASYFQRNLGSLNI 230
             EE +   K  GAD  IN   +D +A ++          VI              +L  
Sbjct: 61  VREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAK 120

Query: 231 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRS 268
            G+ +++    GA    +   +    +    + + ++S
Sbjct: 121 QGK-YVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQS 157

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 56.9 bits (136), Expect = 2e-10
 Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 9/154 (5%)

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171
           VSL++ A    ++  V +     + +  G + LV G +  IG  ++   K  G  V  TA
Sbjct: 1   VSLEEGALLEPLSVGVHA--CRRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTA 57

Query: 172 GSEEKLAVCKDLGADVCINYKTED----FVARVKEETGGKGVDVILDCMGASYFQRNLG- 226
            S  +L V K+ GADV +           +        G   +V +DC G          
Sbjct: 58  RSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGIN 117

Query: 227 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 260
                G L ++G        + + +  A+ + ++
Sbjct: 118 ITRTGGTLMLVGMGSQ-MVTVPLVNACAREIDIK 150

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.4 bits (132), Expect = 7e-10
 Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 14/156 (8%)

Query: 118 AAFPEVACTVWSTVFMTSHLSPG--ESFLVHGGSSGIGTFAIQMGKCQGVRVFVT--AGS 173
            A      T    V    H+S G  ++ +V G +   G+ A Q+G   G    V      
Sbjct: 7   GAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQ 66

Query: 174 EEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGR 233
           E+ L +  +LG D  +NYKT +   +++E     GVDV  D +G       +  +N +  
Sbjct: 67  EKCLFLTSELGFDAAVNYKTGNVAEQLREAC-PGGVDVYFDNVGGDISNTVISQMNENSH 125

Query: 234 LFIIGTQGGAKTEL---------NITSLFAKRLTVQ 260
           + + G       ++                + +T +
Sbjct: 126 IILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRE 161

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 54.3 bits (129), Expect = 1e-09
 Identities = 43/181 (23%), Positives = 72/181 (39%), Gaps = 14/181 (7%)

Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172
           S ++AA       T +  + +T    PGE   ++G         +Q  K  G+ V     
Sbjct: 2   SFEEAAPIFCAGVTTYKALKVT-GAKPGEWVAIYGIGGLGHVA-VQYAKAMGLNVVAVDI 59

Query: 173 SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
            +EKL + K+LGAD+ +N   ED    +KE+ GG    V+   +    FQ    S+   G
Sbjct: 60  GDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVV-TAVSKPAFQSAYNSIRRGG 118

Query: 233 RLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKV 292
              ++G     +  + I       + +  + + +R    +AL             A GKV
Sbjct: 119 ACVLVGLPPE-EMPIPIFDTVLNGIKIIGSIVGTRKDLQEAL----------QFAAEGKV 167

Query: 293 K 293
           K
Sbjct: 168 K 168

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 53.9 bits (128), Expect = 2e-09
 Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 4/163 (2%)

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171
           V   + A       TV+  +  T +  PG+   +  G  G+G  A+Q  +  G+ V    
Sbjct: 1   VEFAEIAPILCAGVTVYKGLKQT-NARPGQWVAIS-GIGGLGHVAVQYARAMGLHVAAID 58

Query: 172 GSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231
             + KL + + LGA + +N + ED V  ++ + GG    V++  +  S F + +G     
Sbjct: 59  IDDAKLELARKLGASLTVNARQEDPVEAIQRDIGG-AHGVLVTAVSNSAFGQAIGMARRG 117

Query: 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKAL 274
           G + ++G   G      I  +  K L +  + + +R+   +AL
Sbjct: 118 GTIALVGLPPG-DFPTPIFDVVLKGLHIAGSIVGTRADLQEAL 159

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 52.2 bits (124), Expect = 6e-09
 Identities = 29/148 (19%), Positives = 46/148 (31%), Gaps = 1/148 (0%)

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173
           L+          + +     T+ ++PG +  V G      +  I        R+     +
Sbjct: 3   LERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDIN 62

Query: 174 EEKLAVCKDLGADVCINYKTED-FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232
            EK    K LGA  C+N +  D  V  V  E    GVD  LDC G +   +      + G
Sbjct: 63  GEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLG 122

Query: 233 RLFIIGTQGGAKTELNITSLFAKRLTVQ 260
                            T       ++ 
Sbjct: 123 WGSCTVVGAKVDEMTIPTVDVILGRSIN 150

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 51.8 bits (123), Expect = 1e-08
 Identities = 27/151 (17%), Positives = 48/151 (31%), Gaps = 5/151 (3%)

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFV-TAG 172
            +          T +     T  + PG + +V  G  G+G   I   K  G    +    
Sbjct: 4   PEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVF-GLGGVGLSVIMGCKSAGASRIIGIDL 62

Query: 173 SEEKLAVCKDLGADVCINYKTED-FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231
           +++K      +GA  CI+ K     ++ V  E  G  V    + +G      +  +    
Sbjct: 63  NKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHM 122

Query: 232 GR--LFIIGTQGGAKTELNITSLFAKRLTVQ 260
                 ++G    AK       L     T +
Sbjct: 123 NYGTSVVVGVPPSAKMLTYDPMLLFTGRTWK 153

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 42.7 bits (100), Expect = 9e-06
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 7/85 (8%)

Query: 11 SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTIL 70
          +    +L+ VE P +K+ EVL++    +++       + +    K  +   G + +  + 
Sbjct: 18 TQSDFELKTVELPPLKNGEVLLEALFLSVD----PYMRIASKRLKEGAVMMGQQVARVVE 73

Query: 71 SVGKNVSRWKVGDQVCALLGGGGYA 95
          S     S +  G  V A  G   + 
Sbjct: 74 S---KNSAFPAGSIVLAQSGWTTHF 95

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 41.8 bits (97), Expect = 5e-05
 Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 10/98 (10%)

Query: 144 LVHGGSSGIG-TFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLG--------ADVCINYKT 193
           +V G + GIG     Q+ K +    +  TA   EK    K +           V  +   
Sbjct: 7   VVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSL 66

Query: 194 EDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231
           + FV++V E  G  G+ ++++  G           N  
Sbjct: 67  DTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRA 104

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 38.9 bits (90), Expect = 5e-04
 Identities = 11/94 (11%), Positives = 29/94 (30%), Gaps = 9/94 (9%)

Query: 144 LVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA-----DVCINYKTEDFV 197
           +V       G   A+++ +  G  V     S ++    +               +  + +
Sbjct: 4   IVTNVKHFGGMGSALRLSE-AGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELI 62

Query: 198 ARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231
             V    G   VDV++     +   + +    ++
Sbjct: 63  EAVTSAYG--QVDVLVSNDIFAPEFQPIDKYAVE 94

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 38.3 bits (89), Expect = 7e-04
 Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 9/88 (10%)

Query: 140 GESFLVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA-----DVCINYKT 193
           G+  LV GG+ GIG   A    + +G  V +     E   V + +G      D+    + 
Sbjct: 5   GKGVLVTGGARGIGRAIAQAFAR-EGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERER 63

Query: 194 EDFVARVKEETGGKGVDVILDCMGASYF 221
             FV       G   VDV+++    +  
Sbjct: 64  VRFVEEAAYALG--RVDVLVNNAAIAAP 89

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 8/94 (8%)

Query: 133 MTSHLSPGESFLVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGA--DVC 188
           M   L+ G   LV G   GIG      +    G RV   + ++  L ++ ++      VC
Sbjct: 1   MELFLA-GRRVLVTGAGKGIGRGTVQALHA-TGARVVAVSRTQADLDSLVRECPGIEPVC 58

Query: 189 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQ 222
           ++    +   R     G   VD++++    +  Q
Sbjct: 59  VDLGDWEATERALGSVG--PVDLLVNNAAVALLQ 90

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 14/90 (15%)

Query: 144 LVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----------LGADVCINY 191
           LV GG+ GIG     +     G  +   A +E +L  C                D  +  
Sbjct: 12  LVTGGTKGIGHAIVEEFAG-FGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRP 70

Query: 192 KTEDFVARVKEETGGKGVDVILDCMGASYF 221
           + E  +  V    GGK +D++++ +GA   
Sbjct: 71  EREKLMQTVSSMFGGK-LDILINNLGAIRS 99

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 36.0 bits (82), Expect = 0.003
 Identities = 12/75 (16%), Positives = 22/75 (29%), Gaps = 3/75 (4%)

Query: 144 LVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKLA-VCKDLGADVCINYKTEDFVARVK 201
           +V+GG   +G        K  G  V     S    A     +  +     + +  + +  
Sbjct: 6   IVYGGKGALGSAILEFFKK-NGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTA 64

Query: 202 EETGGKGVDVILDCM 216
               G  VD +    
Sbjct: 65  SSLQGSQVDGVFCVA 79

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.7 bits (82), Expect = 0.004
 Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 7/83 (8%)

Query: 144 LVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGA--DVCINYKTEDFVAR 199
           LV G   GIG      +    G +V     +   L ++ K+      VC++    D   +
Sbjct: 9   LVTGAGKGIGRDTVKALHA-SGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEK 67

Query: 200 VKEETGGKGVDVILDCMGASYFQ 222
                G   VD++++       Q
Sbjct: 68  ALGGIG--PVDLLVNNAALVIMQ 88

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 35.8 bits (82), Expect = 0.004
 Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 10/77 (12%)

Query: 144 LVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKLA-VCKDLG-------ADVCINYKTE 194
           L+ GG+SG+G     +    +G +V V   S E+LA +  D G        DV      +
Sbjct: 9   LITGGASGLGRALVDRFVA-EGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQK 67

Query: 195 DFVARVKEETGGKGVDV 211
              +R     G     +
Sbjct: 68  QAASRCVARFGKIDTLI 84

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	325
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.98
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.96
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.96
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.96
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.96
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.96
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.96
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.96
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.96
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.95
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.95
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.95
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.95
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.95
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.94
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.94
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.94
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.94
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.94
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.93
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.93
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.93
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.93
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.93
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.93
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.92
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.92
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.92
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.92
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.91
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.91
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.91
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.91
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.91
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.9
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.9
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.9
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.9
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.9
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.9
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.9
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.9
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.9
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.9
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.89
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.88
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.88
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.87
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.85
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.72
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.68
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.51
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.34
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.21
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.94
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.9
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.87
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.85
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.84
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.84
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.8
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.77
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.75
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.75
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.75
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.75
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.73
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.72
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.72
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.71
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.71
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.7
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.69
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.69
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.68
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.67
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.65
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.63
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.61
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.61
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	97.61
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.58
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.56
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.55
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.54
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.53
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.51
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.51
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.49
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.48
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.47
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.47
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.47
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.46
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.46
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.46
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.46
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.45
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.44
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.43
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	97.42
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.41
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.41
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.39
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.39
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.38
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.36
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.36
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.34
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.27
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.26
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.24
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.24
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.24
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.21
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.14
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	97.13
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.13
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.13
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.13
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.12
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.1
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.08
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.06
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	97.0
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	97.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.95
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.9
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.88
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.86
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.8
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.79
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.71
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.7
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	96.66
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.63
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	96.57
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.52
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.51
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.5
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.49
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.4
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.38
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.37
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	96.33
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	96.31
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.3
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.3
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.3
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.27
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	96.27
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.26
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	96.21
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.2
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.16
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.12
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	96.06
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	96.04
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	96.0
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	95.98
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.97
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	95.95
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.93
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	95.79
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.74
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.74
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	95.7
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.61
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	95.59
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	95.57
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.57
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	95.5
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	95.44
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	95.44
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	95.44
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.37
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	95.35
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	95.32
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	95.29
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.24
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.23
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	95.21
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.2
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.19
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.18
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.18
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.12
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.12
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	95.1
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.1
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.06
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	95.01
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	94.96
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.92
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	94.9
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	94.86
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	94.81
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.81
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.8
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	94.78
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	94.7
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	94.69
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.68
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.67
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	94.62
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.62
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	94.6
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.56
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.46
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.44
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.3
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	94.25
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.21
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	94.0
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.9
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.89
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.89
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	93.81
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.73
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.73
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.72
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	93.72
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.72
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	93.68
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.65
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	93.6
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.59
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.57
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	93.38
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.36
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	93.35
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	93.34
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.34
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	93.19
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	93.17
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	93.14
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	93.12
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	93.12
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	93.07
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.02
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.82
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.64
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.62
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	92.46
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	92.43
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.17
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.05
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.99
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	91.74
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.74
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.71
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	91.67
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.63
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	91.56
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	91.52
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	91.49
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	91.48
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	91.39
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	91.24
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.19
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	91.11
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	91.08
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	91.06
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	91.0
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	90.98
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	90.96
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	90.94
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	90.78
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	90.58
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	90.57
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	90.45
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	90.44
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	90.39
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	90.22
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	90.08
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	90.03
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	89.88
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	89.76
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	89.76
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	89.72
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	89.69
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	89.44
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	89.39
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	89.14
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	89.02
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	88.92
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	88.78
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	88.71
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	88.65
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	88.6
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	88.49
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	88.34
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	88.34
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	88.27
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	88.26
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	88.25
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	88.18
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	88.1
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	88.02
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	87.93
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	87.92
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.79
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	87.79
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	87.79
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	87.6
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	87.49
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	87.49
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	87.4
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.35
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	87.06
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	86.88
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	86.71
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	86.58
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	86.55
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	86.54
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	86.35
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	86.17
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.14
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	86.08
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	86.04
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	85.7
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.7
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	85.55
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	85.41
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	85.34
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	85.22
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	85.18
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	85.16
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	85.09
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	85.0
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	84.99
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	84.94
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	84.93
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	84.87
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	84.66
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	84.61
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	84.45
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	84.25
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	84.12
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	83.98
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	83.61
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	83.55
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	83.46
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	83.34
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	83.22
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	83.21
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	82.82
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	82.82
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	82.82
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	82.51
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	82.3
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	82.25
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	82.21
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	81.87
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	81.82
d2ax3a2	211	Hypothetical protein TM0922, N-terminal domain {Th	81.66
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	81.54
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	81.34
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	81.18
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	81.16
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	81.12
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	80.93
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	80.59
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	80.54
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	80.31
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	80.23
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	80.21
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	80.15

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=4.7e-32  Score=207.98  Aligned_cols=146  Identities=30%  Similarity=0.435  Sum_probs=136.8

Q ss_pred             CEEEEEcCCCCCcceEEE-eecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~-~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (325)
                      |||++++++|++++++++ +.+.|+|+++||+|||.+++||++|++.+.|..+....+|.++|||++|+|+++|+++++|
T Consensus         3 MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~   82 (150)
T d1yb5a1           3 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAF   82 (150)
T ss_dssp             EEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTTC
T ss_pred             eeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeecc
Confidence            899999999999999985 6899999999999999999999999999999888777789999999999999999999999


Q ss_pred             CCCCEEEEEc-CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEE
Q 020487           80 KVGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH  146 (325)
Q Consensus        80 ~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~  146 (325)
                      ++||+|++.. .+|+|+||++++++.++++|+++++++||+++....++++++......+.|+++||+
T Consensus        83 ~vGdrV~~~~~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1          83 KKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             CTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             ccCccccccccccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            9999998765 458999999999999999999999999999999999999998888889999999874

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.96  E-value=1.3e-30  Score=206.26  Aligned_cols=144  Identities=21%  Similarity=0.214  Sum_probs=126.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC--CCCCCCCCCCceeEEEEEecCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      |.|+++..+++   |++++.+.|+|+++||+||+.++|||++|++.+.+....  ....|.++|||++|+|+++|+++++
T Consensus         2 ~maAVl~g~~~---l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~   78 (178)
T d1e3ja1           2 NLSAVLYKQND---LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKH   78 (178)
T ss_dssp             CEEEEEEETTE---EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCS
T ss_pred             ceEEEEEcCCc---EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCC
Confidence            45666776554   999999999999999999999999999999988765432  2245789999999999999999999


Q ss_pred             CCCCCEEEEEc----------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHH
Q 020487           79 WKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST  130 (325)
Q Consensus        79 ~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~  130 (325)
                      |++||+|+...                            .+|+|+||++++++.++++|+++++++++++..++.|+|.+
T Consensus        79 ~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a  158 (178)
T d1e3ja1          79 LKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDA  158 (178)
T ss_dssp             CCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHH
T ss_pred             CCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHH
Confidence            99999997532                            35899999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCCCEEEEEcC
Q 020487          131 VFMTSHLSPGESFLVHGG  148 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~  148 (325)
                      + +.+++++|++|+|+|+
T Consensus       159 ~-~~~~~~~g~~VlVig~  175 (178)
T d1e3ja1         159 F-EAARKKADNTIKVMIS  175 (178)
T ss_dssp             H-HHHHHCCTTCSEEEEE
T ss_pred             H-HHhCCCCCCEEEEEcc
Confidence            8 6788999999999986

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=1.5e-29  Score=199.65  Aligned_cols=142  Identities=29%  Similarity=0.372  Sum_probs=127.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||++++++|++  +++++.+.|.|+++||+||+.+++||++|++.+.|.++....+|.++|||++|+|+++|+++++++
T Consensus         6 MkA~v~~~~g~p--l~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~~~~   83 (175)
T d1llua1           6 MKAAVVHAYGAP--LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVK   83 (175)
T ss_dssp             EEEEEBCSTTSC--CEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             cEEEEEEeCCCC--CEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCccccc
Confidence            899999999876  899999999999999999999999999999999999887677899999999999999999999999


Q ss_pred             CCCEEEEEc----------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487           81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (325)
Q Consensus        81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~  132 (325)
                      +||||+...                            .+|+|+||++++++.++++|++++++.++++..++.+++.++ 
T Consensus        84 ~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t~~~~~-  162 (175)
T d1llua1          84 EGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM-  162 (175)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGHHHHHHHH-
T ss_pred             cCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCCCChhHHHHHHhHHHHHHHHH-
Confidence            999997421                            247899999999999999999999988888889999999877 


Q ss_pred             hhcCCCCCCEEEEE
Q 020487          133 MTSHLSPGESFLVH  146 (325)
Q Consensus       133 ~~~~~~~~~~vli~  146 (325)
                      +.. ..+|++|||+
T Consensus       163 ~~g-~~~G~~VLVl  175 (175)
T d1llua1         163 RAG-QIEGRIVLEM  175 (175)
T ss_dssp             HTT-CCSSEEEEEC
T ss_pred             HhC-CCCCCEEEeC
Confidence            333 4469999985

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=1.1e-29  Score=189.28  Aligned_cols=131  Identities=34%  Similarity=0.544  Sum_probs=122.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||++++.+|++  +++++.+.|.|+++||+||+.++|||++|++.+.|.++....+|+++|||++|+|           
T Consensus         1 MkA~~~~~~G~~--l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------   67 (131)
T d1iz0a1           1 MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------   67 (131)
T ss_dssp             CEEEEECSTTSC--EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------
T ss_pred             CcEEEEccCCCC--CEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------
Confidence            999999999876  8999999999999999999999999999999999998877778999999999999           


Q ss_pred             CCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEE
Q 020487           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH  146 (325)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~  146 (325)
                      +||+|+++..+|+|+||++++++.++++|+++++++||+++..+.|||++|.+++  +.|++||++
T Consensus        68 vGd~V~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1          68 EGRRYAALVPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             TTEEEEEECSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred             ccceEEEEeccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence            3999999999999999999999999999999999999999999999999996655  568988863

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=6.8e-29  Score=189.89  Aligned_cols=142  Identities=26%  Similarity=0.403  Sum_probs=124.9

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (325)
Q Consensus         2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (325)
                      +.+.++.+|++++|++++.+.|+|+++||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|++
T Consensus         2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~v   80 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP-PSLPSGLGTEAAGIVSKVGSGVKHIKA   80 (147)
T ss_dssp             EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred             eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCC-Ccceeeeccccccceeeeeeecccccc
Confidence            4688999999999999999999999999999999999999999999998864 346889999999999999999999999


Q ss_pred             CCEEEEE-cCCceeeeEEeecCCceeeCCCCCCHHh--hccCcchHHHHHHHHHhhcCCCCCCEEEE
Q 020487           82 GDQVCAL-LGGGGYAEKVAVPAGQVLPVPSGVSLKD--AAAFPEVACTVWSTVFMTSHLSPGESFLV  145 (325)
Q Consensus        82 Gd~V~~~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~--aa~l~~~~~~a~~~l~~~~~~~~~~~vli  145 (325)
                      ||+|+.. ...|+|++|++++.+.++++|+++++++  +++++....++++++.+ .++++|++|||
T Consensus        81 GdrV~~~~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1          81 GDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             TCEEEESCCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             cceeeeeccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence            9999754 3568999999999999999999988764  44556667777777744 57899999997

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.96  E-value=6.2e-29  Score=195.54  Aligned_cols=142  Identities=30%  Similarity=0.470  Sum_probs=121.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||++++.++++  |++++.+.|+|+++||+|||.++|||++|++.+++.......+|.++|||++|+|+++|++++.++
T Consensus         1 MkA~v~~~~g~p--l~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~   78 (171)
T d1rjwa1           1 MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (171)
T ss_dssp             CEEEEBSSTTSC--CEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEecCCCC--cEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCce
Confidence            999999998876  999999999999999999999999999999999887666667799999999999999999999999


Q ss_pred             CCCEEEEEc----------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487           81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (325)
Q Consensus        81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~  132 (325)
                      +||+|+...                            .+|+|+||+++++++++++|++++++.|+ +.. ..+++.++ 
T Consensus        79 vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~~-~~~~~~~~-  155 (171)
T d1rjwa1          79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LEK-INEVFDRM-  155 (171)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GGG-HHHHHHHH-
T ss_pred             eeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHHHH-HHH-HHHHHHHH-
Confidence            999997421                            24899999999999999999999986554 543 45566555 


Q ss_pred             hhcCCCCCCEEEEEcC
Q 020487          133 MTSHLSPGESFLVHGG  148 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~  148 (325)
                      ....+ +|++|||+|.
T Consensus       156 ~~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         156 LKGQI-NGRVVLTLED  170 (171)
T ss_dssp             HTTCC-SSEEEEECCC
T ss_pred             HhcCC-CCCEEEEeCC
Confidence            34455 5999999985

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.4e-28  Score=191.22  Aligned_cols=155  Identities=28%  Similarity=0.505  Sum_probs=143.0

Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      +|+++||+++++++|||++|.+..++++|++|||+|++|++|++++|+|+.+|++|+++++++++.+.++++|+++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~vi~~   80 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNH   80 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCcccccccccccccccccccCccccccc
Confidence            57899999999999999999888999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeeccccccc
Q 020487          192 KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRS  268 (325)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  268 (325)
                      ++.++.+.+++.++++++|+++||+|++.+..++++++++|+++.+|...  ..+++...++.+++++.++.+....
T Consensus        81 ~~~~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~--~~~~~~~~~~~k~~~i~g~~~~~~~  155 (174)
T d1yb5a2          81 REVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRG--TIEINPRDTMAKESSIIGVTLFSST  155 (174)
T ss_dssp             TSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCS--CEEECTHHHHTTTCEEEECCGGGCC
T ss_pred             ccccHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCC--CCCCCHHHHHHCCCEEEEEEecCCC
Confidence            99999999999999999999999999988999999999999999998643  3467778888899999999776543

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.96  E-value=1.1e-28  Score=198.25  Aligned_cols=143  Identities=22%  Similarity=0.244  Sum_probs=129.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++.+++.+  |++++++.|+|+++||+||+.++|||++|++.+.|..+.. .+|.++|||++|+|+++|+++++|+
T Consensus         9 ~kAav~~~~~~p--l~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~-~~p~i~GhE~~G~v~~vG~~v~~~~   85 (199)
T d1cdoa1           9 CKAAVAWEANKP--LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD-GFPVVLGHEGAGIVESVGPGVTEFQ   85 (199)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTT-SCSEECCCCEEEEEEEECTTCCSCC
T ss_pred             EEEEEEecCCCC--cEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhccccc-ccccccccccceEEEEEcCCCceec
Confidence            479999998877  9999999999999999999999999999999999976543 4688999999999999999999999


Q ss_pred             CCCEEEEEc------------------------------------------------CCceeeeEEeecCCceeeCCCCC
Q 020487           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (325)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (325)
                      +||||+...                                                .+|+|+||++++++.++++|+++
T Consensus        86 ~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP~~~  165 (199)
T d1cdoa1          86 PGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSV  165 (199)
T ss_dssp             TTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECCCCC
Confidence            999997532                                                13899999999999999999999


Q ss_pred             CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEE
Q 020487          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH  146 (325)
Q Consensus       113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~  146 (325)
                      ++++++++.+++.|++.++......+.|++|||+
T Consensus       166 ~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         166 KLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             CCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            9999999999999999999888888999999984

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=1.9e-28  Score=195.20  Aligned_cols=181  Identities=26%  Similarity=0.408  Sum_probs=155.9

Q ss_pred             HhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCc
Q 020487          115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE  194 (325)
Q Consensus       115 ~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~  194 (325)
                      +|||+++++++|||+++.+..++++|++|||+|++|++|++++|+|+..|++|+++++++++.+.++++|+++++++++.
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~~   80 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSV   80 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCS
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccccccccccccCCcc
Confidence            47889999999999999899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHH
Q 020487          195 DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKAL  274 (325)
Q Consensus       195 ~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  274 (325)
                      ++.+.+++.++++++|++|||+|++.+..++++++++|+++.+|..............+.+++++.++.+..... ..+.
T Consensus        81 ~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  159 (183)
T d1pqwa_          81 DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLK-LQPA  159 (183)
T ss_dssp             THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHH-HCHH
T ss_pred             CHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceec-cCHH
Confidence            999999999999999999999999999999999999999999987654332222233346888888876554322 2344


Q ss_pred             HHHHHHHHHHHHHHCCcccccc
Q 020487          275 IVSEVEKNVWPAIAVGKVKPVI  296 (325)
Q Consensus       275 ~~~~~~~~~~~~~~~g~l~~~~  296 (325)
                      ..++.++++++++.+|++++++
T Consensus       160 ~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         160 RYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HHHHHHHHHHHHHHTTSSCCCC
T ss_pred             HHHHHHHHHHHHHHCCCCceeC
Confidence            5667888899999999999854

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.95  E-value=1.4e-28  Score=192.78  Aligned_cols=140  Identities=20%  Similarity=0.292  Sum_probs=125.5

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhhhhhCCCCC--CCCCCCCCCCceeEEEEEecCCCCC
Q 020487            2 KAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         2 ~a~~~~~~~~~~~l~~~~~~~~~~-~~~ev~v~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      ||++++++|++  |++++.+.|++ +++||+||+.+++||++|++.+.|..+.  ...+|.++|||++|+|+++|+++++
T Consensus         1 kA~~~~~~g~p--l~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~   78 (171)
T d1h2ba1           1 KAARLHEYNKP--LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEG   78 (171)
T ss_dssp             CEEEESSTTSC--CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCS
T ss_pred             CEEEEEeCCCC--CEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCc
Confidence            79999999987  99999999986 6899999999999999999999987642  2356889999999999999999999


Q ss_pred             CCCCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHH
Q 020487           79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (325)
Q Consensus        79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l  131 (325)
                      +++||||+...                           .+|+|+||++++++.++++|++++++.++++.+++.++|+++
T Consensus        79 ~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~al  158 (171)
T d1h2ba1          79 LEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL  158 (171)
T ss_dssp             CCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHHH
T ss_pred             CCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHHH
Confidence            99999998632                           358999999999999999999999988888999999999998


Q ss_pred             HhhcCCCCCCEEEE
Q 020487          132 FMTSHLSPGESFLV  145 (325)
Q Consensus       132 ~~~~~~~~~~~vli  145 (325)
                       +.+.+ .|++|||
T Consensus       159 -~~~~~-~G~~VlI  170 (171)
T d1h2ba1         159 -EKGEV-LGRAVLI  170 (171)
T ss_dssp             -HTTCC-SSEEEEE
T ss_pred             -HhcCC-CCCEEEe
Confidence             56777 7999997

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=7.2e-29  Score=190.73  Aligned_cols=143  Identities=20%  Similarity=0.315  Sum_probs=129.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||++++.++++..+++++.+.|+|++|||+|||.++|||++|++.+.|..+.....|.++|+|++|+|++  +.+..|+
T Consensus         4 ~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~~~   81 (152)
T d1xa0a1           4 FQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPRFR   81 (152)
T ss_dssp             EEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSSCC
T ss_pred             eEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCccc
Confidence            69999999998877889999999999999999999999999999999998776667799999999999998  5677899


Q ss_pred             CCCEEEEEc------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEc
Q 020487           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG  147 (325)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g  147 (325)
                      +||+|+...      .+|+|+||++++++.++++|++++ .++++++++..|++.++.....++ |++||++|
T Consensus        82 ~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~~~~iP~~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1          82 EGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             TTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTHH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             cCCEEEEecCccccccCCCcceeeeehhhccccCCCCCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            999998764      368999999999999999999998 578889999999999988888876 99999986

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=4.3e-28  Score=192.77  Aligned_cols=145  Identities=19%  Similarity=0.230  Sum_probs=125.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCC-CCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV-SRW   79 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~-~~~   79 (325)
                      |||+++..+++...+++++.+.++++++||+||+.++|||++|++.+.|.++.. .+|+++|||++|+|+++|+++ +.+
T Consensus         7 ~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~-~~P~i~GHE~~G~Vv~vG~~v~~~~   85 (192)
T d1piwa1           7 FEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNM-KMPLVVGHEIVGKVVKLGPKSNSGL   85 (192)
T ss_dssp             EEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCC-CSSEECCCCEEEEEEEECTTCCSSC
T ss_pred             eEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCC-CCCcCcccccccchhhccccccccc
Confidence            689999999888888888888777899999999999999999999999877643 468999999999999999987 679


Q ss_pred             CCCCEEEEE-----------------------------------cCCceeeeEEeecCCceeeCCCCCCHHhhccCcchH
Q 020487           80 KVGDQVCAL-----------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVA  124 (325)
Q Consensus        80 ~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~  124 (325)
                      ++||||...                                   ..+|+|+||++++++.++++|+++++++|+.+...+
T Consensus        86 k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aal~~~~~  165 (192)
T d1piwa1          86 KVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGV  165 (192)
T ss_dssp             CTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEESSHHHH
T ss_pred             CCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHHHHHHHHH
Confidence            999999521                                   124899999999999999999999998876555557


Q ss_pred             HHHHHHHHhhcCCCCCCEEEEEc
Q 020487          125 CTVWSTVFMTSHLSPGESFLVHG  147 (325)
Q Consensus       125 ~~a~~~l~~~~~~~~~~~vli~g  147 (325)
                      .+||.++ +.+.++++++|++..
T Consensus       166 ~ta~~~l-~~~~vk~g~~Vvv~~  187 (192)
T d1piwa1         166 HEAFERM-EKGDVRYRFTLVGYD  187 (192)
T ss_dssp             HHHHHHH-HHTCCSSEEEEECCH
T ss_pred             HHHHHHH-HHhCCCCCCEEEEEC
Confidence            7999988 678999999998753

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=8.4e-28  Score=192.33  Aligned_cols=143  Identities=24%  Similarity=0.255  Sum_probs=127.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++.+++++  |++++.|.|+|+++||+|||.++|||++|++++.|..+.. .+|.++|||++|+|+++|++++.++
T Consensus         7 ~kAav~~~~g~~--l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~-~~p~v~GhE~~G~V~~vG~~V~~~~   83 (197)
T d2fzwa1           7 CKAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEG-CFPVILGHLGAGIVESVGEGVTKLK   83 (197)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTC-CSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             EEEEEEccCCCC--CEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccc-cccccCCcceeeEEEeecCCceecC
Confidence            699999999887  9999999999999999999999999999999999976543 4688999999999999999999999


Q ss_pred             CCCEEEEEc------------------------------------------------CCceeeeEEeecCCceeeCCCCC
Q 020487           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (325)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (325)
                      +||+|+...                                                .+|+|+||+++++..++++|+++
T Consensus        84 ~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~~l  163 (197)
T d2fzwa1          84 AGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLI  163 (197)
T ss_dssp             TTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECCCCC
Confidence            999997531                                                02899999999999999999999


Q ss_pred             CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEE
Q 020487          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH  146 (325)
Q Consensus       113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~  146 (325)
                      +.++++++.+++.+++.++.....-+.+++|+|+
T Consensus       164 ~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         164 KVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             CSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            9999999999999999998655555678888874

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.95  E-value=1.7e-26  Score=183.38  Aligned_cols=169  Identities=21%  Similarity=0.317  Sum_probs=147.8

Q ss_pred             ccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHH
Q 020487          118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV  197 (325)
Q Consensus       118 a~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  197 (325)
                      ++++++++|||++|.+..++++|++|||+|++|.+|++++|+++..|++|+++++++++.+.++++|+++++++.+.++.
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~   87 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSL   87 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCH
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHH
Confidence            46889999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             HHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCc------ccccchHHHHhhccEeeecccccccchh
Q 020487          198 ARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA------KTELNITSLFAKRLTVQAAGLRSRSTEN  271 (325)
Q Consensus       198 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~  271 (325)
                      +.+.+.+++.++|++|||+|++.+...+++++++|+++.+|.....      ...++...++.+++++.|+.+..+..+ 
T Consensus        88 ~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~~~~-  166 (182)
T d1v3va2          88 EEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGD-  166 (182)
T ss_dssp             HHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGCCHH-
T ss_pred             HHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEeccChH-
Confidence            8888889989999999999999999999999999999999864321      234556778899999999877655432 


Q ss_pred             HHHHHHHHHHHHHHHHHCC
Q 020487          272 KALIVSEVEKNVWPAIAVG  290 (325)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~g  290 (325)
                         ..++.++++.+++.+|
T Consensus       167 ---~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         167 ---VREKALRDLMKWVLEG  182 (182)
T ss_dssp             ---HHHHHHHHHHHHHHTT
T ss_pred             ---HHHHHHHHHHHHHhCc
Confidence               3445566688888776

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=9.9e-28  Score=193.43  Aligned_cols=140  Identities=24%  Similarity=0.283  Sum_probs=124.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++.+++++  ++++++|.|+|+++||+|||.++|||++|++.+.|.++.  .+|.++|||++|+|+++|+++++++
T Consensus         9 ~KAaV~~~~g~p--l~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~--~~P~v~GHE~~G~V~~vG~~V~~~~   84 (202)
T d1e3ia1           9 CKAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA--LFPVVLGHECAGIVESVGPGVTNFK   84 (202)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSCC--CSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             EEEEEEccCCCC--CEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeeccc--ccccccccccceEEeeecCCceecc
Confidence            799999999877  999999999999999999999999999999999998764  4589999999999999999999999


Q ss_pred             CCCEEEEEc----------------------------------------------------CCceeeeEEeecCCceeeC
Q 020487           81 VGDQVCALL----------------------------------------------------GGGGYAEKVAVPAGQVLPV  108 (325)
Q Consensus        81 ~Gd~V~~~~----------------------------------------------------~~g~~~~~~~~~~~~~~~~  108 (325)
                      +||+|+...                                                    .+|+|+||+++++..++++
T Consensus        85 ~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l~~l  164 (202)
T d1e3ia1          85 PGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARV  164 (202)
T ss_dssp             TTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred             CCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhhEEEC
Confidence            999997532                                                    0288999999999999999


Q ss_pred             CCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEc
Q 020487          109 PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG  147 (325)
Q Consensus       109 p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g  147 (325)
                      |++++++.++++.+++.+.+.++..   +++|++|.|+.
T Consensus       165 P~~~~~~~~~~~~~~~~~~~~a~~~---~k~G~~V~vi~  200 (202)
T d1e3ia1         165 DDEFDLDLLVTHALPFESINDAIDL---MKEGKSIRTIL  200 (202)
T ss_dssp             CTTSCGGGGEEEEEEGGGHHHHHHH---HHTTCCSEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCEEEEEE
Confidence            9999999988888888888887732   36789887764

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=5.2e-27  Score=186.07  Aligned_cols=177  Identities=33%  Similarity=0.463  Sum_probs=149.0

Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      +|+++||++++.++|||++|.+..+++||++|+|+|++|.+|++++|+|+..|++|+++++++++++.++++|+++++|+
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~vi~~   80 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINY   80 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEEEEC
Confidence            57899999999999999999888899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhh-ccEeeecccccccch
Q 020487          192 KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK-RLTVQAAGLRSRSTE  270 (325)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~  270 (325)
                      ++.++.+.+++.++++++|+++|++|++.+...+++++++|+++.+|.........+...+..+ .+.+....+....  
T Consensus        81 ~~~d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--  158 (179)
T d1qora2          81 REEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYI--  158 (179)
T ss_dssp             TTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHC--
T ss_pred             CCCCHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccCCccccchhhhhccceEEEEeeEEeeec--
Confidence            9999999999999999999999999999999999999999999999887766555555554443 3333333222211  


Q ss_pred             hHHHHHHHHHHHHHHHHHCC
Q 020487          271 NKALIVSEVEKNVWPAIAVG  290 (325)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~g  290 (325)
                      ..++.+.+.++++++++++|
T Consensus       159 ~~~~~~~~~~~~l~~lv~~G  178 (179)
T d1qora2         159 TTREELTEASNELFSLIASG  178 (179)
T ss_dssp             CSHHHHHHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHHCc
Confidence            12234555666688888877

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.95  E-value=4.7e-27  Score=187.34  Aligned_cols=140  Identities=26%  Similarity=0.320  Sum_probs=121.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |+|+++.+.+++  |++++.+.|+|+++||+||+.++|||++|++.+.|.++.  .+|.++|||++|+|+++|+++++|+
T Consensus         4 ~~Aav~~~~g~~--l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~--~~P~i~GHE~~G~V~~vG~~v~~~~   79 (194)
T d1f8fa1           4 IIAAVTPCKGAD--FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV--PLPAVLGHEGSGIIEAIGPNVTELQ   79 (194)
T ss_dssp             EEEEEBCSTTCC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC--CSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             eEEEEEcCCCCC--cEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcccc--cCCcccccceEEEeeecCccceeEc
Confidence            689999988876  999999999999999999999999999999999998764  4699999999999999999999999


Q ss_pred             CCCEEEEEc-------------------------------------------------CCceeeeEEeecCCceeeCCCC
Q 020487           81 VGDQVCALL-------------------------------------------------GGGGYAEKVAVPAGQVLPVPSG  111 (325)
Q Consensus        81 ~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~  111 (325)
                      +||+|+...                                                 ..|+|+||.++++.+++++|++
T Consensus        80 vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~~  159 (194)
T d1f8fa1          80 VGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKD  159 (194)
T ss_dssp             TTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTT
T ss_pred             cCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECCCC
Confidence            999996521                                                 0267899999999999999998


Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT  170 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~  170 (325)
                      ++++++                         +++.|+ |.+|++++|+++.+|++.++.
T Consensus       160 i~~~~~-------------------------~~i~g~-g~~g~~aiq~a~~~g~~~iia  192 (194)
T d1f8fa1         160 FPFDQL-------------------------VKFYAF-DEINQAAIDSRKGITLKPIIK  192 (194)
T ss_dssp             CCGGGG-------------------------EEEEEG-GGHHHHHHHHHHTSCSEEEEE
T ss_pred             CCcccE-------------------------EEEeCc-HHHHHHHHHHHHHcCCCEEEE
Confidence            876544                         334555 999999999999999965544

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.94  E-value=5.6e-27  Score=183.38  Aligned_cols=154  Identities=18%  Similarity=0.228  Sum_probs=132.9

Q ss_pred             CCHHhhccCcchHHHHHHHH---HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEE
Q 020487          112 VSLKDAAAFPEVACTVWSTV---FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC  188 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l---~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~  188 (325)
                      +++++||+++.++.|||+++   .+....++|++|||+|++|++|.+++|+++..|++|+++++++++.+.++++|++++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~v   80 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEV   80 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhccccee
Confidence            57899999999999999664   456788899999999999999999999999999999999999999999999999999


Q ss_pred             EeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccc
Q 020487          189 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR  267 (325)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  267 (325)
                      ++++...  .+....++++++|+|||++|++.+...+++|+++|+++.+|...+...+++..+++.|++++.|......
T Consensus        81 i~~~~~~--~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv~~~~~  157 (176)
T d1xa0a2          81 LAREDVM--AERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYC  157 (176)
T ss_dssp             EECC-----------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSC
T ss_pred             eecchhH--HHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEEeCCcC
Confidence            9876532  3444567778999999999999999999999999999999998877788999999999999999754433

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.94  E-value=5e-27  Score=185.43  Aligned_cols=141  Identities=29%  Similarity=0.348  Sum_probs=117.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC-------CCCCCCCCCCceeEEEEEec
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-------PKGASPYPGLECSGTILSVG   73 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~-------~~~~p~~~G~e~~G~V~~vG   73 (325)
                      |||+++.++|++  |++++.+.|+|+++||+||+.++|||++|++.+.|.++.       ...+|+++|||++|+|+++|
T Consensus         1 MKA~~~~~~G~p--l~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g   78 (177)
T d1jvba1           1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG   78 (177)
T ss_dssp             CEEEEECSTTSC--CEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEEC
T ss_pred             CeEEEEEeCCCC--CEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeec
Confidence            999999999987  999999999999999999999999999999999986532       23578999999999999999


Q ss_pred             CCCCCCCCCCEEEEEc---------------------------CCceeeeEEeecCC-ceeeCCCCCCHHhhccCcchHH
Q 020487           74 KNVSRWKVGDQVCALL---------------------------GGGGYAEKVAVPAG-QVLPVPSGVSLKDAAAFPEVAC  125 (325)
Q Consensus        74 ~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~l~~~~~  125 (325)
                      +++++|++||+|....                           .+|+|+||++++.. .++++|+..+.+.++.+..++.
T Consensus        79 ~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~~  158 (177)
T d1jvba1          79 DEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEAN  158 (177)
T ss_dssp             TTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGHH
T ss_pred             cCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCChHHHHHHHHHHHH
Confidence            9999999999997532                           24899999999764 5667776655555555567889


Q ss_pred             HHHHHHHhhcCCCCCCEEEE
Q 020487          126 TVWSTVFMTSHLSPGESFLV  145 (325)
Q Consensus       126 ~a~~~l~~~~~~~~~~~vli  145 (325)
                      +++.++ +..++ .|++|||
T Consensus       159 ~a~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         159 EAIDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             HHHHHH-HTTCC-CSEEEEE
T ss_pred             HHHHHH-Hhhcc-cCCceEC
Confidence            999888 55565 5888887

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.4e-27  Score=189.57  Aligned_cols=141  Identities=21%  Similarity=0.235  Sum_probs=118.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC--CCCCCCCCCCceeEEEEEecCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR   78 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~   78 (325)
                      |+|++++.+++   |++++.+.|+|+++||+|||.++|||++|++.+.+....  ...+|.++|||++|+|+++|+++++
T Consensus         8 ~~a~V~~gp~~---l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~   84 (185)
T d1pl8a1           8 NLSLVVHGPGD---LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH   84 (185)
T ss_dssp             CEEEEEEETTE---EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred             CEEEEEeCCCe---EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceee
Confidence            57999997764   999999999999999999999999999999998764321  2245889999999999999999999


Q ss_pred             CCCCCEEEEEc----------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHH
Q 020487           79 WKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST  130 (325)
Q Consensus        79 ~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~  130 (325)
                      |++||+|+...                            .+|+|+||++++.++++++|+++++++++.++  .++++.+
T Consensus        85 ~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~p--l~~a~~a  162 (185)
T d1pl8a1          85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFP--LEKALEA  162 (185)
T ss_dssp             CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEE--GGGHHHH
T ss_pred             ecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHHH--HHHHHHH
Confidence            99999997531                            25789999999999999999999999887654  3455666


Q ss_pred             HHhhcCCCCCCEEEEEcC
Q 020487          131 VFMTSHLSPGESFLVHGG  148 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~  148 (325)
                      + +..++++|++|+| |+
T Consensus       163 ~-~~~~~~~G~~VlI-g~  178 (185)
T d1pl8a1         163 F-ETFKKGLGLKIML-KC  178 (185)
T ss_dssp             H-HHHHTTCCSEEEE-EC
T ss_pred             H-HHhCCCCCCEEEE-Ee
Confidence            5 4567789999998 44

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=7.5e-27  Score=177.38  Aligned_cols=129  Identities=19%  Similarity=0.314  Sum_probs=115.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..++++..+++++.+.|+|+++||+|||.++|||++|.+...|.++....+|.++|+|++|+|+++|.  ..++
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~   78 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFH   78 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCC
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCcc
Confidence            99999999999888999999999999999999999999999999999999887777899999999999999766  4789


Q ss_pred             CCCEEEEEc------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHH
Q 020487           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (325)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l  131 (325)
                      +||+|+..+      .+|+|+||+++++++++++|+++++++||++++++.||+..+
T Consensus        79 ~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1          79 AGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIIN  135 (146)
T ss_dssp             TTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHHT
T ss_pred             ceeeEEeecccceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999998754      369999999999999999999999999999999888887644

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=7.3e-27  Score=183.25  Aligned_cols=150  Identities=30%  Similarity=0.442  Sum_probs=126.9

Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      +++++||+++++++|||+++. ..+++||++|+|+|++|++|++++|+|+..|++|+++++++++++.++++|+++++|+
T Consensus         1 ls~eeAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~i~~   79 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATY   79 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccceeeeh
Confidence            578999999999999999994 5899999999999999999999999999999999999999999999999999999986


Q ss_pred             CCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeeccccccc
Q 020487          192 KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRS  268 (325)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  268 (325)
                      .+     ...+.+.++++|++|||+| +.+..++++++++|+++.+|...+...+++...++.+++++.|+.+.++.
T Consensus        80 ~~-----~~~~~~~~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~~~~  150 (171)
T d1iz0a2          80 AE-----VPERAKAWGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLL  150 (171)
T ss_dssp             GG-----HHHHHHHTTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHHT
T ss_pred             hh-----hhhhhhccccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCcChh
Confidence            53     2234455678999999988 46788899999999999999877666678888899999999999876553

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.93  E-value=1.2e-25  Score=179.24  Aligned_cols=179  Identities=20%  Similarity=0.297  Sum_probs=147.2

Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEE-cCCchHHHHHHHHHHHCCCEEEEEecChhh----HHHHHHcCCC
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH-GGSSGIGTFAIQMGKCQGVRVFVTAGSEEK----LAVCKDLGAD  186 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~-g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~----~~~~~~~g~~  186 (325)
                      +++++||+++..++|||++|.+..+++||++++|+ |++|++|++++|+||.+|++|++++++.++    .+.++++|++
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad   80 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT   80 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc
Confidence            57899999999999999999888999999988886 778999999999999999999999866543    4566789999


Q ss_pred             EEEeCCC---chHHHHHHHHh--CCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeee
Q 020487          187 VCINYKT---EDFVARVKEET--GGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA  261 (325)
Q Consensus       187 ~~~~~~~---~~~~~~~~~~~--~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~  261 (325)
                      ++++++.   ..+...+.+.+  .+.++|++|||+|++.+...+++|+++|+++.+|...+....++...++.+++++.|
T Consensus        81 ~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i~G  160 (189)
T d1gu7a2          81 QVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAG  160 (189)
T ss_dssp             EEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEE
T ss_pred             EEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEEEE
Confidence            9998653   23344444432  345799999999999999999999999999999987776677888888999999999


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHCCc
Q 020487          262 AGLRSRSTENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                      +++..+.. ..++..++.++++.+++++|+
T Consensus       161 ~~~~~~~~-~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         161 FWVTELLK-NNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             CCHHHHHT-TCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEehHhhh-hCHHHHHHHHHHHHHHHHcCC
Confidence            87755432 234556677888889888875

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=3.1e-26  Score=180.38  Aligned_cols=137  Identities=17%  Similarity=0.190  Sum_probs=116.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCC---
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS---   77 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~---   77 (325)
                      |||+++..++++  |++++++.|+|+++||+|||.++|||++|++.+.|.++.. .+|+++|||++|+|+++|++++   
T Consensus         5 ~kA~v~~~~~~p--l~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~-~~P~vlGHE~~G~V~~vG~~v~~~~   81 (184)
T d1vj0a1           5 AHAMVLEKFNQP--LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRV-PLPIILGHEGAGRVVEVNGEKRDLN   81 (184)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTC-CSSBCCCCEEEEEEEEESSCCBCTT
T ss_pred             EEEEEEecCCCC--cEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCcc-ccccccceeeeeeeeEEeccccccc
Confidence            589999998877  9999999999999999999999999999999999987643 4699999999999999999885   


Q ss_pred             --CCCCCCEEEEEc------------------------------------CCceeeeEEeec-CCceeeCCCCCCHHhhc
Q 020487           78 --RWKVGDQVCALL------------------------------------GGGGYAEKVAVP-AGQVLPVPSGVSLKDAA  118 (325)
Q Consensus        78 --~~~~Gd~V~~~~------------------------------------~~g~~~~~~~~~-~~~~~~~p~~~~~~~aa  118 (325)
                        .+++||+|....                                    .+|+|+||++++ +.+++++|+++++++  
T Consensus        82 ~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~~~--  159 (184)
T d1vj0a1          82 GELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRL--  159 (184)
T ss_dssp             SCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCEEE--
T ss_pred             cccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCHHH--
Confidence              468999997421                                    158999999996 578999999998653  


Q ss_pred             cCcchHHHHHHHHHhhcCCCCCCEEEEEc
Q 020487          119 AFPEVACTVWSTVFMTSHLSPGESFLVHG  147 (325)
Q Consensus       119 ~l~~~~~~a~~~l~~~~~~~~~~~vli~g  147 (325)
                          +..+|+.++ +.+.+++|++|+|+.
T Consensus       160 ----pl~~A~~a~-~~~~~~~G~~VlI~~  183 (184)
T d1vj0a1         160 ----PLKEANKAL-ELMESREALKVILYP  183 (184)
T ss_dssp             ----EGGGHHHHH-HHHHHTSCSCEEEEC
T ss_pred             ----HHHHHHHHH-HHhCCCcCCEEEEee
Confidence                234566676 667889999999974

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.93  E-value=6.5e-25  Score=172.64  Aligned_cols=171  Identities=24%  Similarity=0.326  Sum_probs=147.1

Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEe
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN  190 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (325)
                      ++++.++.+++.+.|||.++.+..+++||++|+|+|+ |++|++++|+++.+|+ +|++++.++++++.++++|++++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~   79 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVIN   79 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEe
Confidence            3567889999999999999989999999999999998 9999999999999999 5667788899999999999999999


Q ss_pred             CCCchHHHHHHHHhCCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCC-cccccchHHHHhhccEeeeccccccc
Q 020487          191 YKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRSRS  268 (325)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~  268 (325)
                      ++..++.+.+++.+++ ++|++|||+|.. .+..+++.++++|+++.+|.... ....++..+++.+++++.|+...+..
T Consensus        80 ~~~~~~~~~i~~~t~g-g~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~  158 (174)
T d1f8fa2          80 SKTQDPVAAIKEITDG-GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGS  158 (174)
T ss_dssp             TTTSCHHHHHHHHTTS-CEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSC
T ss_pred             CCCcCHHHHHHHHcCC-CCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecCCC
Confidence            9999999999999876 899999999975 46888999999999999987553 44578888999999999998765543


Q ss_pred             chhHHHHHHHHHHHHHHHHHCCc
Q 020487          269 TENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                      .       ++.++++++|+++|+
T Consensus       159 ~-------~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         159 P-------KKFIPELVRLYQQGK  174 (174)
T ss_dssp             H-------HHHHHHHHHHHHTTS
T ss_pred             h-------HHHHHHHHHHHHcCC
Confidence            2       233555888888875

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.93  E-value=3.7e-25  Score=173.72  Aligned_cols=168  Identities=22%  Similarity=0.322  Sum_probs=148.2

Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEe
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN  190 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (325)
                      +++.+||++++++.|||+++ ++.+++++++|+|+|++|++|++++|+++..|+ +|++++.++++++.++++|++++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence            57899999999999999998 668899999999999889999999999999996 9999999999999999999999999


Q ss_pred             CCCchHHHHHHHHhCCCcccEEEeCCChHH-HHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccc
Q 020487          191 YKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRST  269 (325)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  269 (325)
                      ++..++.+.+++.++++++|++|||+|+.. +..++++++++|+++.+|.... ...++...++.+++++.|+..++.  
T Consensus        80 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~i~i~Gs~~~~~--  156 (170)
T d1jvba2          80 ASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA-DLHYHAPLITLSEIQFVGSLVGNQ--  156 (170)
T ss_dssp             TTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCC-CCCCCHHHHHHHTCEEEECCSCCH--
T ss_pred             cCCcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccC-ccccCHHHHHhCCcEEEEEecCCH--
Confidence            999999999999998889999999999865 6888999999999999987653 467888889999999999876533  


Q ss_pred             hhHHHHHHHHHHHHHHHHHCCc
Q 020487          270 ENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                              +.++++++++++|+
T Consensus       157 --------~d~~~~l~lv~~GK  170 (170)
T d1jvba2         157 --------SDFLGIMRLAEAGK  170 (170)
T ss_dssp             --------HHHHHHHHHHHTTS
T ss_pred             --------HHHHHHHHHHHcCC
Confidence                    22344788888875

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.93  E-value=3.8e-28  Score=188.72  Aligned_cols=148  Identities=22%  Similarity=0.306  Sum_probs=130.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++...++...|++++++.|++++|||+|||.|+|||++|++.+.|..+.....|.++|+|++|+|++  +.+.+++
T Consensus         4 ~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~~~   81 (162)
T d1tt7a1           4 FQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPRFA   81 (162)
T ss_dssp             EEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTTCC
T ss_pred             EEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccccc
Confidence            79999999999888999999999999999999999999999999999998887667788999999999998  5677899


Q ss_pred             CCCEEEEEc------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCch
Q 020487           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG  151 (325)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~  151 (325)
                      +||+|+...      .+|+|+||++++++.++++|+++++++||+++..++|+|.++.. .....+++|||+|++|.
T Consensus        82 ~g~~v~~~~~~~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~-~~~~~~~~Vli~ga~G~  157 (162)
T d1tt7a1          82 EGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLE-ETPGALKDILQNRIQGR  157 (162)
T ss_dssp             TTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECST-THHHHHHHTTTTCCSSE
T ss_pred             cceeeEeeeccceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCcce
Confidence            999998765      35899999999999999999999999999999999999976532 23344577888887653

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.93  E-value=1.1e-28  Score=197.59  Aligned_cols=154  Identities=21%  Similarity=0.298  Sum_probs=126.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCC-------CCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEec
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQI-------KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVG   73 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~-------~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG   73 (325)
                      +||++++.+++   +++++++.|++       .++||+||+.+++||++|++.+.|..+.  .+|+++|||++|+|+++|
T Consensus         2 ~kA~v~~~~~~---le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~~--~~P~v~GHE~~G~Vv~vG   76 (201)
T d1kola1           2 NRGVVYLGSGK---VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA--QVGLVLGHEITGEVIEKG   76 (201)
T ss_dssp             EEEEEEEETTE---EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCC--CTTCBCCCCEEEEEEEEC
T ss_pred             cEEEEEeCCCc---eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCccc--ccceeccceeeeeeeccc
Confidence            58999998875   99999998865       4699999999999999999999998765  469999999999999999


Q ss_pred             CCCCCCCCCCEEEEEc-------------------------------------CCceeeeEEeecC--CceeeCCCCCCH
Q 020487           74 KNVSRWKVGDQVCALL-------------------------------------GGGGYAEKVAVPA--GQVLPVPSGVSL  114 (325)
Q Consensus        74 ~~~~~~~~Gd~V~~~~-------------------------------------~~g~~~~~~~~~~--~~~~~~p~~~~~  114 (325)
                      +++++|++||||....                                     .+|+|+||++++.  .+++++|++.++
T Consensus        77 ~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~  156 (201)
T d1kola1          77 RDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKA  156 (201)
T ss_dssp             TTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHH
T ss_pred             cccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCCh
Confidence            9999999999996321                                     1489999999975  369999998777


Q ss_pred             HhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC
Q 020487          115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV  165 (325)
Q Consensus       115 ~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~  165 (325)
                      .+++++..++.++++++ .....+.+    ++|+ |++|+.++|+||.+|+
T Consensus       157 ~~~~~~~~~~~~~~~a~-~~~~~~~g----~~g~-G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         157 MEKINIAEVVGVQVISL-DDAPRGYG----EFDA-GVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             HHTCCHHHHHTEEEECG-GGHHHHHH----HHHH-TCSCEEEECTTCSSCC
T ss_pred             HHHHHHHHHHHHHHHHH-HhCCCCCe----EEee-CHHHHHHHHHHHHcCC
Confidence            77777777777777665 33333333    3576 9999999999998875

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=1.2e-24  Score=170.94  Aligned_cols=131  Identities=18%  Similarity=0.277  Sum_probs=109.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||++...++++  |++++++.|+|+++||+||+.++|||++|++.+.|..+.. .+|+++|||++|+|+++|+++++++
T Consensus         1 m~a~~~~~~~~p--l~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~-~~P~i~GhE~~G~V~~vG~~V~~~~   77 (179)
T d1uufa1           1 IKAVGAYSAKQP--LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGT-VYPCVPGHEIVGRVVAVGDQVEKYA   77 (179)
T ss_dssp             CEEEEBSSTTSC--CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCC-CSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEccCCCC--CEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccc-cccccccccccccchhhccccccCC
Confidence            999999998877  9999999999999999999999999999999999976543 5699999999999999999999999


Q ss_pred             CCCEEEEEc------------------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchH
Q 020487           81 VGDQVCALL------------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVA  124 (325)
Q Consensus        81 ~Gd~V~~~~------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~  124 (325)
                      +||+|....                                    .+|+|+||+++++++++++|+.....   .+..++
T Consensus        78 vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~---~~a~~l  154 (179)
T d1uufa1          78 PGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEM---IRADQI  154 (179)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEE---ECGGGH
T ss_pred             CCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcCh---hHhchh
Confidence            999995211                                    13789999999999999999654322   234566


Q ss_pred             HHHHHHHHhhcCCC
Q 020487          125 CTVWSTVFMTSHLS  138 (325)
Q Consensus       125 ~~a~~~l~~~~~~~  138 (325)
                      .+++.++ .++.++
T Consensus       155 ~~a~~a~-~~a~v~  167 (179)
T d1uufa1         155 NEAYERM-LRGDVK  167 (179)
T ss_dssp             HHHHHHH-HTTCSS
T ss_pred             HHHHHHH-HHhCcc
Confidence            7888877 445554

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.92  E-value=3.2e-25  Score=177.90  Aligned_cols=140  Identities=26%  Similarity=0.313  Sum_probs=115.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++.+++++  |++++.+.|+|+++||+|||.++|||++|++.+.|.++..  +|.++|||++|+|+++|+++++++
T Consensus         9 ~KAavl~~~~~~--l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~~~--~P~i~GHE~~G~Vv~vG~~v~~~~   84 (198)
T d2jhfa1           9 CKAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP--LPVIAGHEAAGIVESIGEGVTTVR   84 (198)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC--SSBCCCCSEEEEEEEECTTCCSCC
T ss_pred             EEEEEEecCCCC--CEEEEEECCCCCCCEEEEEEEEEecccccceeecCCcccc--cceecccceeEEEEecCccccCcC
Confidence            799999988876  9999999999999999999999999999999999987753  689999999999999999999999


Q ss_pred             CCCEEEEEc------------------------------------------------CCceeeeEEeecCCceeeCCCCC
Q 020487           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (325)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (325)
                      +||+|+...                                                ..|+|+||+++++.+++++|+.+
T Consensus        85 vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p~~~  164 (198)
T d2jhfa1          85 PGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAF  164 (198)
T ss_dssp             TTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEECCCCC
Confidence            999997521                                                02789999999999999999998


Q ss_pred             CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEc
Q 020487          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG  147 (325)
Q Consensus       113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g  147 (325)
                      +++.+++...++.....+.   ..+++|++|+|+.
T Consensus       165 ~~e~l~~~~~~~~~v~~g~---~~l~~G~~VaVi~  196 (198)
T d2jhfa1         165 ALDPLITHVLPFEKINEGF---DLLRSGESIRTIL  196 (198)
T ss_dssp             CCGGGEEEEEEGGGHHHHH---HHHHTTCCSEEEE
T ss_pred             CHHHHHHHHHHHHhhhhCC---ceeeCCCEEEEEE
Confidence            8776655444433322221   1246788887753

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.92  E-value=7.1e-26  Score=181.18  Aligned_cols=139  Identities=24%  Similarity=0.261  Sum_probs=116.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++++++++  |++++.+.|+|+++||+|||.++|||++|++.+.|.++.  .+|.++|||++|+|+++|+++.+++
T Consensus         9 ~KAav~~~~g~~--l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~~--~~P~i~GHE~~G~Vv~~G~~v~~~~   84 (198)
T d1p0fa1           9 CKAAVAWEPHKP--LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS--KFPVILGHEAVGVVESIGAGVTCVK   84 (198)
T ss_dssp             EEEEEBSSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC--CSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             EEEEEEccCCCC--CEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecccc--ccccccceeeeeeeeecCcccccCc
Confidence            899999999876  999999999999999999999999999999999998765  4699999999999999999999999


Q ss_pred             CCCEEEEEc------------------------------------------------CCceeeeEEeecCCceeeCCCCC
Q 020487           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (325)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (325)
                      +||+|+...                                                .+|+|+||+.+++..++++|+++
T Consensus        85 ~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~~~  164 (198)
T d1p0fa1          85 PGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKI  164 (198)
T ss_dssp             TTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTS
T ss_pred             CCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCCCC
Confidence            999997522                                                02679999999999999999999


Q ss_pred             CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHH
Q 020487          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGT  154 (325)
Q Consensus       113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~  154 (325)
                      +++..+.......+          +.+++.++|.|+ |++|+
T Consensus       165 ~~~~~~~~~~~~~~----------v~~~~~vlv~G~-G~iGl  195 (198)
T d1p0fa1         165 NVNFLVSTKLTLDQ----------INKAFELLSSGQ-GVRSI  195 (198)
T ss_dssp             CGGGGEEEEECGGG----------HHHHHHHTTTSS-CSEEE
T ss_pred             CHHHHHHhhcchhh----------cCCCCEEEEECC-CcceE
Confidence            98776654443222          233445777776 66654

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=5.2e-24  Score=166.37  Aligned_cols=165  Identities=22%  Similarity=0.374  Sum_probs=139.5

Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      ++++++|++++++.|||+++ +++++++|++|+|.|+ |++|++++|+++.+|++|+++++++++++.++++|+++++++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCccccccc
Confidence            57899999999999999998 5689999999999997 999999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchh
Q 020487          192 KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTEN  271 (325)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  271 (325)
                      ...+..+.+.+.+.+ ..++++++.+...+..++++++++|+++.+|.+.. ..+++..+++.+++++.|+..++..   
T Consensus        79 ~~~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~Gs~~~~~~---  153 (166)
T d1llua2          79 RQEDPVEAIQRDIGG-AHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPG-DFPTPIFDVVLKGLHIAGSIVGTRA---  153 (166)
T ss_dssp             TTSCHHHHHHHHHSS-EEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSS-EEEEEHHHHHHTTCEEEECCSCCHH---
T ss_pred             cchhHHHHHHHhhcC-CcccccccccchHHHHHHHHhcCCcEEEEEEecCC-CccCCHHHHHhCCcEEEEEeecCHH---
Confidence            988888888877653 34555555556678899999999999999997654 4578888999999999998765431   


Q ss_pred             HHHHHHHHHHHHHHHHHCC
Q 020487          272 KALIVSEVEKNVWPAIAVG  290 (325)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~g  290 (325)
                             .++++++++.+|
T Consensus       154 -------d~~e~l~l~~~G  165 (166)
T d1llua2         154 -------DLQEALDFAGEG  165 (166)
T ss_dssp             -------HHHHHHHHHHTT
T ss_pred             -------HHHHHHHHHHCc
Confidence                   233377888776

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.91  E-value=7.7e-25  Score=171.56  Aligned_cols=118  Identities=20%  Similarity=0.213  Sum_probs=101.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (325)
Q Consensus         1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (325)
                      |||+++..+++   +++++.|.|.|+++||+||+.++|||++|++.+.+..+.. .+|+++|||++|+|+++|+++++|+
T Consensus         1 MKa~v~~~~~~---l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~-~~P~i~GhE~~G~V~~vG~~v~~~~   76 (177)
T d1jqba1           1 MKGFAMLGINK---LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD-RKNMILGHEAVGEVVEVGSEVKDFK   76 (177)
T ss_dssp             CEEEEEEETTE---EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCC-CSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEEeCCC---eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCC-CCCccCcceeeEEeeecccccceec
Confidence            99999998876   9999999999999999999999999999998775544322 4588999999999999999999999


Q ss_pred             CCCEEEEEc------------------------------CCceeeeEEeecC--CceeeCCCCCCHHhhccCcc
Q 020487           81 VGDQVCALL------------------------------GGGGYAEKVAVPA--GQVLPVPSGVSLKDAAAFPE  122 (325)
Q Consensus        81 ~Gd~V~~~~------------------------------~~g~~~~~~~~~~--~~~~~~p~~~~~~~aa~l~~  122 (325)
                      +||||+...                              .+|+|+||++++.  .+++++|+++++++++....
T Consensus        77 vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~  150 (177)
T d1jqba1          77 PGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVY  150 (177)
T ss_dssp             TTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEE
T ss_pred             CCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHH
Confidence            999997421                              2589999999986  36899999999887764433

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.91  E-value=5.3e-24  Score=166.98  Aligned_cols=169  Identities=18%  Similarity=0.223  Sum_probs=138.8

Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEe
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN  190 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (325)
                      +|+++|+.++++++|+|+++ +.+++++|++|+|+|+ |++|++++|+++.+|+ +|++++.+++|++.++++|++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~   78 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN   78 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEEC
T ss_pred             CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCcccccc
Confidence            57899999999999999998 6789999999999998 9999999999999998 7999999999999999999999999


Q ss_pred             CCCchHHHHHHHHhCCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCc-ccccchHH--HHhhccEeeeccccc
Q 020487          191 YKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA-KTELNITS--LFAKRLTVQAAGLRS  266 (325)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~--~~~~~~~i~~~~~~~  266 (325)
                      +++..+.+.+.+.+++.++|++|||+|.. .+..++++++++|+++.+|.+... ...++...  ...+++++.+.....
T Consensus        79 ~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  158 (174)
T d1jqba2          79 YKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG  158 (174)
T ss_dssp             GGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCCCC
T ss_pred             ccchhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecCCC
Confidence            99989999999999999999999999975 468889999999999999876542 22222222  234677888875543


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHCCc
Q 020487          267 RSTENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                      ..         ...+.+.+++..|+
T Consensus       159 ~r---------~~~e~l~~li~~gk  174 (174)
T d1jqba2         159 GR---------LRAERLRDMVVYNR  174 (174)
T ss_dssp             HH---------HHHHHHHHHHHTTS
T ss_pred             Cc---------ccHHHHHHHHHcCC
Confidence            21         12233666776664

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.91  E-value=1.7e-23  Score=163.82  Aligned_cols=168  Identities=25%  Similarity=0.364  Sum_probs=143.2

Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      +++++||+++++++|||+++ +..+++||++|+|+|+ |++|++++++++..|++|++++.+++++++++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceeccc
Confidence            57899999999999999998 5678999999999987 999999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchh
Q 020487          192 KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTEN  271 (325)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  271 (325)
                      .+.++...+.+.+.+ ..|+++++.+...+..++++++++|+++.+|.... ...++..+++.+++++.|+...+.    
T Consensus        79 ~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~-~~~~~~~~~~~~~~~i~gs~~~~~----  152 (168)
T d1rjwa2          79 LKEDAAKFMKEKVGG-VHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE-EMPIPIFDTVLNGIKIIGSIVGTR----  152 (168)
T ss_dssp             TTSCHHHHHHHHHSS-EEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS-EEEEEHHHHHHTTCEEEECCSCCH----
T ss_pred             ccchhhhhcccccCC-CceEEeecCCHHHHHHHHHHhccCCceEecccccC-CCCCCHHHHHHCCcEEEEEeeCCH----
Confidence            998888888888864 45555555556668999999999999999987654 456788888999999999866532    


Q ss_pred             HHHHHHHHHHHHHHHHHCCccc
Q 020487          272 KALIVSEVEKNVWPAIAVGKVK  293 (325)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~g~l~  293 (325)
                            +.++++++++++|+++
T Consensus       153 ------~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         153 ------KDLQEALQFAAEGKVK  168 (168)
T ss_dssp             ------HHHHHHHHHHHTTSCC
T ss_pred             ------HHHHHHHHHHHhCCCC
Confidence                  1234488889888764

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.91  E-value=5.2e-23  Score=161.05  Aligned_cols=169  Identities=20%  Similarity=0.283  Sum_probs=136.5

Q ss_pred             CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      +++++|.++|++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++.+|+ +|++++.+++|++.++++|++++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~   80 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNP   80 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCC
Confidence            578999999999999999988999999999999998 9999999999999999 78899999999999999999999976


Q ss_pred             CC-chHHHHHHHHhCCCcccEEEeCCChHH-HHHhhccccCC-CEEEEEeccCCcccccchHHHHhhccEeeeccccccc
Q 020487          192 KT-EDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNID-GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRS  268 (325)
Q Consensus       192 ~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  268 (325)
                      .. +.....+.+.+.+.++|++|||+|.+. +..++++++++ |+++.+|.+.. ...++...++. +.++.|+.+.+..
T Consensus        81 ~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~-~~~i~~~~~~~-~k~i~Gs~~Gs~~  158 (174)
T d1e3ia2          81 RELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD-EMTIPTVDVIL-GRSINGTFFGGWK  158 (174)
T ss_dssp             GGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS-EEEEEHHHHHT-TCEEEECSGGGCC
T ss_pred             ccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCC-ccccchHHHhc-cCEEEEEEeeCCC
Confidence            54 334555555556669999999999864 68889999996 99999997653 34566666553 5688888766543


Q ss_pred             chhHHHHHHHHHHHHHHHHHCCc
Q 020487          269 TENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                      .       .+.+.++++++.+|+
T Consensus       159 ~-------~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         159 S-------VDSVPNLVSDYKNKK  174 (174)
T ss_dssp             H-------HHHHHHHHHHHHTTS
T ss_pred             h-------HHHHHHHHHHHHCcC
Confidence            2       123344777777764

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=3.2e-24  Score=167.97  Aligned_cols=157  Identities=17%  Similarity=0.219  Sum_probs=132.7

Q ss_pred             CCHHhhccCcchHHHHHHHHH---hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEE
Q 020487          112 VSLKDAAAFPEVACTVWSTVF---MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC  188 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~---~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~  188 (325)
                      +|+.+|+++++++.|||.+++   +.....++++|||+|++|++|.+++|+||.+|++|+++++++++.+.++++|++++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~v   80 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRV   80 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhccccc
Confidence            578999999999999997753   33344456799999999999999999999999999999999999999999999999


Q ss_pred             EeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeeccccccc
Q 020487          189 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRS  268 (325)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  268 (325)
                      +++++.++.+    ......+|.++|++|++.+...+++++++|+++.+|...+...+.+..+++.+++++.|++.....
T Consensus        81 i~~~~~~~~~----~l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~  156 (177)
T d1o89a2          81 LPRDEFAESR----PLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTP  156 (177)
T ss_dssp             EEGGGSSSCC----SSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEECCSSSCC
T ss_pred             cccccHHHHH----HHHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEEEecccCC
Confidence            9987655432    223446899999999999999999999999999999887777778888999999999998665554


Q ss_pred             chhH
Q 020487          269 TENK  272 (325)
Q Consensus       269 ~~~~  272 (325)
                      .++.
T Consensus       157 ~~~~  160 (177)
T d1o89a2         157 PERR  160 (177)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4333

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.90  E-value=4.5e-23  Score=161.80  Aligned_cols=165  Identities=25%  Similarity=0.360  Sum_probs=139.5

Q ss_pred             CHHhhccCcchHHHHHHHHHhhc-CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEe
Q 020487          113 SLKDAAAFPEVACTVWSTVFMTS-HLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN  190 (325)
Q Consensus       113 ~~~~aa~l~~~~~~a~~~l~~~~-~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (325)
                      .+.++|+++++++|||+++.+.. .++||++|+|.|+ |++|++++|+++.+|+ +|++++.++++++.++++|++++++
T Consensus         5 ~l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~   83 (172)
T d1h2ba2           5 KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVD   83 (172)
T ss_dssp             HHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             hHHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeec
Confidence            35688999999999999997655 5899999999998 9999999999999997 7788889999999999999999999


Q ss_pred             CCCchHHHHHHHHhCCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccc
Q 020487          191 YKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRST  269 (325)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  269 (325)
                      +.++. .+...+.+++.++|++|||+|+. .++.+++.++++|+++.+|...  ..+++..+++.+++++.|+...++. 
T Consensus        84 ~~~~~-~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~--~~~~~~~~l~~k~~~i~Gs~~~~~~-  159 (172)
T d1h2ba2          84 ARRDP-VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG--ELRFPTIRVISSEVSFEGSLVGNYV-  159 (172)
T ss_dssp             TTSCH-HHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS--CCCCCHHHHHHTTCEEEECCSCCHH-
T ss_pred             CcccH-HHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc--cccCCHHHHHhCCcEEEEEEecCHH-
Confidence            87655 45566788888999999999986 4789999999999999998533  4578888999999999999765431 


Q ss_pred             hhHHHHHHHHHHHHHHHHHCCc
Q 020487          270 ENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                               .++++++++.+|+
T Consensus       160 ---------d~~~~l~l~~~GK  172 (172)
T d1h2ba2         160 ---------ELHELVTLALQGK  172 (172)
T ss_dssp             ---------HHHHHHHHHHTTS
T ss_pred             ---------HHHHHHHHHHcCC
Confidence                     2334788888875

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.90  E-value=2.1e-23  Score=165.31  Aligned_cols=153  Identities=21%  Similarity=0.312  Sum_probs=130.0

Q ss_pred             HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCC
Q 020487          114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYK  192 (325)
Q Consensus       114 ~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~  192 (325)
                      ++.+|.+.+++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+++++++.
T Consensus         3 ~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~   81 (182)
T d1vj0a2           3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRR   81 (182)
T ss_dssp             HHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECC-CccchhheecccccccccccccccccccccccccccceEEEecc
Confidence            45677889999999999988889999999999998 9999999999999998 899999999999999999999999888


Q ss_pred             CchH---HHHHHHHhCCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCC-cccccchH-HHHhhccEeeeccccc
Q 020487          193 TEDF---VARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGG-AKTELNIT-SLFAKRLTVQAAGLRS  266 (325)
Q Consensus       193 ~~~~---~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~-~~~~~~~~i~~~~~~~  266 (325)
                      ..+.   .+.+.+.+++.++|+||||+|.+ .+..++++++++|+++.+|.... ...+.+.. .++.|++++.|+..++
T Consensus        82 ~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~  161 (182)
T d1vj0a2          82 ETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD  161 (182)
T ss_dssp             TSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC
T ss_pred             ccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCC
Confidence            7654   45577788888999999999975 46888999999999999986543 33444443 3567899999987654


Q ss_pred             c
Q 020487          267 R  267 (325)
Q Consensus       267 ~  267 (325)
                      .
T Consensus       162 ~  162 (182)
T d1vj0a2         162 T  162 (182)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.90  E-value=1.7e-26  Score=182.41  Aligned_cols=156  Identities=24%  Similarity=0.266  Sum_probs=128.1

Q ss_pred             CEEEEEcCCCCCc-ceE--EEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCC---------CCCCCCCCCceeEE
Q 020487            1 MKAIVITQPGSPE-VLQ--LQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP---------KGASPYPGLECSGT   68 (325)
Q Consensus         1 m~a~~~~~~~~~~-~l~--~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~---------~~~p~~~G~e~~G~   68 (325)
                      |||+++.++|+|+ .++  ..+.+.|+|+++||+|||.+++||++|++.++|..+..         ...|.++|+|++|+
T Consensus         4 ~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~g~   83 (175)
T d1gu7a1           4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFE   83 (175)
T ss_dssp             EEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEEE
T ss_pred             eEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccccc
Confidence            5999999999873 444  45777788899999999999999999999999876442         13467789999999


Q ss_pred             EEEecCCCCCCCCCCEEEEEcC-CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh-hcCCCCCCEEEEE
Q 020487           69 ILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM-TSHLSPGESFLVH  146 (325)
Q Consensus        69 V~~vG~~~~~~~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~-~~~~~~~~~vli~  146 (325)
                      |+++|.++..++.||+|..... +|+|+||++++++.++++|++++.+.+  +....+|||+++.. ...+++|++++|+
T Consensus        84 V~~~~~~~~~~~~g~~v~~~~~~~g~~aey~~v~~~~~~~iP~~~~~~~a--~~~~~~ta~~~l~~~~~~~~~g~~vli~  161 (175)
T d1gu7a1          84 VIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKAN--GKPNGLTDAKSIETLYDGTKPLHELYQD  161 (175)
T ss_dssp             EEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHT--TCSCCCCCCCCEEEECCSSSCHHHHHHH
T ss_pred             cccccccccccccccceeccccccccccceeeehhhhccCCCccchhhhh--ccchHHHHHHHHHHHhcCCCCCCEEEEE
Confidence            9999999999999999987554 488999999999999999997754444  44566788887753 4679999999999


Q ss_pred             c-CCchHHHHHHH
Q 020487          147 G-GSSGIGTFAIQ  158 (325)
Q Consensus       147 g-~~g~~G~~~~~  158 (325)
                      | |+|++|.+++|
T Consensus       162 gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         162 GVANSKDGKQLIT  174 (175)
T ss_dssp             HHHTGGGSCEEEE
T ss_pred             CccchhhhheEEe
Confidence            8 45778877655

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.90  E-value=7.3e-23  Score=160.50  Aligned_cols=168  Identities=20%  Similarity=0.246  Sum_probs=132.7

Q ss_pred             HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCC
Q 020487          114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYK  192 (325)
Q Consensus       114 ~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~  192 (325)
                      |.+||.+.|++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++.+|+ +|++++.++++++.++++|+++++|++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~   80 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPK   80 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCC
Confidence            45689999999999999888899999999999998 9999999999999997 899999999999999999999999876


Q ss_pred             Cc-hHHHHHHHHhCCCcccEEEeCCChHH-HHHhhccccC-CCEEEEEeccCCc-ccccchHHHHhhccEeeeccccccc
Q 020487          193 TE-DFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNI-DGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLRSRS  268 (325)
Q Consensus       193 ~~-~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~-~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~  268 (325)
                      .. .+.....+.+.++++|++|||+|... +...+..+.+ +|+++.+|..... ..+++... +.+++++.|+.+.++.
T Consensus        81 ~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~-~~~~~~i~Gs~~G~~~  159 (174)
T d1p0fa2          81 DYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLL-LLTGRSLKGSVFGGFK  159 (174)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHH-HHTTCEEEECSGGGCC
T ss_pred             CchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHH-HhCCCEEEEEEeCCCC
Confidence            53 34455556666669999999999865 5667777766 5999999875542 23344333 3467899999876553


Q ss_pred             chhHHHHHHHHHHHHHHHHHCCc
Q 020487          269 TENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                      .++        ++++++++.+|+
T Consensus       160 ~~d--------~~~lidl~~~gK  174 (174)
T d1p0fa2         160 GEE--------VSRLVDDYMKKK  174 (174)
T ss_dssp             GGG--------HHHHHHHHHTTS
T ss_pred             HHH--------HHHHHHHHHcCC
Confidence            322        223778887775

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.3e-22  Score=159.10  Aligned_cols=167  Identities=20%  Similarity=0.274  Sum_probs=137.4

Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEe
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN  190 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (325)
                      +++++|| +..++.+||+++ +++++++|++|+|+|+ |++|++++|+++..|+ +|+++++++++++.++++|++++++
T Consensus         1 vS~e~Aa-l~epla~a~~a~-~~~~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~   77 (171)
T d1pl8a2           1 VTFEEGA-LIEPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQ   77 (171)
T ss_dssp             SCHHHHH-HHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHH-HHHHHHHHHHHH-HHhCCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCccccc
Confidence            4678887 446788999998 6779999999999998 9999999999999999 8999999999999999999999998


Q ss_pred             CCCchHHHHHHH--HhCCCcccEEEeCCChHH-HHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccc
Q 020487          191 YKTEDFVARVKE--ETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR  267 (325)
Q Consensus       191 ~~~~~~~~~~~~--~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  267 (325)
                      ....+.......  ...+.++|++|||+|.+. ++.++++++++|+++.+|.+.. ...++...++.|++++.|+..+..
T Consensus        78 ~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~-~~~~~~~~~~~k~l~i~Gs~~~~~  156 (171)
T d1pl8a2          78 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE-MTTVPLLHAAIREVDIKGVFRYCN  156 (171)
T ss_dssp             CSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS-CCCCCHHHHHHTTCEEEECCSCSS
T ss_pred             ccccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCC-CCccCHHHHHHCCcEEEEEeCCHh
Confidence            877665433332  233458999999999865 6888999999999999997664 457888999999999999864321


Q ss_pred             cchhHHHHHHHHHHHHHHHHHCCccc
Q 020487          268 STENKALIVSEVEKNVWPAIAVGKVK  293 (325)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~g~l~  293 (325)
                                 .++.+++++++|+++
T Consensus       157 -----------~~~~al~li~~gkid  171 (171)
T d1pl8a2         157 -----------TWPVAISMLASKSVN  171 (171)
T ss_dssp             -----------CHHHHHHHHHTTSCC
T ss_pred             -----------HHHHHHHHHHcCCCC
Confidence                       123388899998864

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=2.7e-23  Score=162.49  Aligned_cols=149  Identities=23%  Similarity=0.327  Sum_probs=125.3

Q ss_pred             CCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEe
Q 020487          111 GVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN  190 (325)
Q Consensus       111 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~  190 (325)
                      +.+++.+|++.|+..|+|+++ +++++++|++|+|+|+ |++|++++|+++.+|++++++++++++++.++++|++++++
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~i~   80 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVN   80 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEE
T ss_pred             cccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCCcEEEE
Confidence            367788889999999999999 6789999999999997 99999999999999999999999999999999999999999


Q ss_pred             CCCchHHHHHHHHhCCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeeccccc
Q 020487          191 YKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRS  266 (325)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~  266 (325)
                      +......     ....+++|.+|||+|.. .+...++.++++|+++.+|.........+...++.+++++.|+..++
T Consensus        81 ~~~~~~~-----~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~  152 (168)
T d1uufa2          81 SRNADEM-----AAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG  152 (168)
T ss_dssp             TTCHHHH-----HTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCC
T ss_pred             CchhhHH-----HHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecC
Confidence            8875532     23345899999999976 47889999999999999997766555677888888999999987654

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=1.5e-23  Score=163.84  Aligned_cols=165  Identities=21%  Similarity=0.256  Sum_probs=134.2

Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      ++++.||++.+++.|+|+++ ++.+++||++|+|+|+ |++|++++|+++.+|++|+++++++++++.++++|+++++++
T Consensus         1 lp~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~   78 (168)
T d1piwa2           1 IPSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIAT   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEeec
Confidence            35678899999999999999 5679999999999998 999999999999999999999999999999999999999987


Q ss_pred             CCchHHHHHHHHhCCCcccEEEeCCChHH---HHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeeccccccc
Q 020487          192 KTEDFVARVKEETGGKGVDVILDCMGASY---FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRS  268 (325)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~d~vi~~~g~~~---~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  268 (325)
                      .....   ..+.. .+++|.+++|++...   +..+++.++++|+++.+|.+.. ...++..+++.+++++.|+...+..
T Consensus        79 ~~~~~---~~~~~-~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~Gs~~g~~~  153 (168)
T d1piwa2          79 LEEGD---WGEKY-FDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALGSIK  153 (168)
T ss_dssp             GGTSC---HHHHS-CSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCCCHH
T ss_pred             cchHH---HHHhh-hcccceEEEEecCCccchHHHHHHHhhccceEEEeccccc-cccccHHHHHhCCcEEEEEeeCCHH
Confidence            65431   12222 247999999988532   5778999999999999987554 3467777888899999998765431


Q ss_pred             chhHHHHHHHHHHHHHHHHHCCccc
Q 020487          269 TENKALIVSEVEKNVWPAIAVGKVK  293 (325)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~g~l~  293 (325)
                                .++++++++.+|+++
T Consensus       154 ----------~~~e~l~li~~gkIk  168 (168)
T d1piwa2         154 ----------ELNQLLKLVSEKDIK  168 (168)
T ss_dssp             ----------HHHHHHHHHHHTTCC
T ss_pred             ----------HHHHHHHHHHhCCCC
Confidence                      234488888888764

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=5.6e-23  Score=163.33  Aligned_cols=173  Identities=22%  Similarity=0.279  Sum_probs=132.8

Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCC--CEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHH-HHHcCCCE
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPG--ESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAV-CKDLGADV  187 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~--~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~-~~~~g~~~  187 (325)
                      +++.+.+ +++++.|||.+|.+..++++|  ++|||+||+|++|++++|+|+..|++ |+.++.++++... .+++|+++
T Consensus         2 ~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2           2 LSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             GGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             ccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence            3445544 888999999999999999988  88999999999999999999999995 5556666666554 45899999


Q ss_pred             EEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcc------cccc---hHHHHhhccE
Q 020487          188 CINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAK------TELN---ITSLFAKRLT  258 (325)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~------~~~~---~~~~~~~~~~  258 (325)
                      ++|+...++.+.+++.++ +++|++|||+|++.+...+++++++|+++.+|...+..      ....   ...+..++++
T Consensus        81 vi~~~~~~~~~~~~~~~~-~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~i~  159 (187)
T d1vj1a2          81 AVNYKTGNVAEQLREACP-GGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNIT  159 (187)
T ss_dssp             EEETTSSCHHHHHHHHCT-TCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTTCE
T ss_pred             EeeccchhHHHHHHHHhc-cCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcceE
Confidence            999999999999999885 68999999999999999999999999999998754321      1111   2234568889


Q ss_pred             eeecccccccchhHHHHHHHHHHHHHHHHHCCc
Q 020487          259 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       259 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                      +.++.+..+.+     .+.+.++++.+++.+|+
T Consensus       160 ~~g~~~~~~~~-----~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         160 RERFTVLNYKD-----KFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             EEECCGGGCGG-----GHHHHHHHHHHHHHHTS
T ss_pred             EEEeEecchHH-----HHHHHHHHHHHHHHCcC
Confidence            88876554322     23455666888888875

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.90  E-value=2.4e-22  Score=158.40  Aligned_cols=171  Identities=19%  Similarity=0.231  Sum_probs=133.1

Q ss_pred             CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      ++++||.+++++.|+|+++.+.++++||++|+|+|+ |++|++++|+++.+|+ +|++++.++++++.++++|+++++++
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~   80 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeC
Confidence            578899999999999999988899999999999998 7899999999999997 78888889999999999999999987


Q ss_pred             CC-chHHHHHHHHhCCCcccEEEeCCChHH-HHHhhccccCCCEEEEEeccCC-cccccchHHHHhhccEeeeccccccc
Q 020487          192 KT-EDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRSRS  268 (325)
Q Consensus       192 ~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~  268 (325)
                      .+ ........+.+.+.++|++|||+|... +..+...++++++++.++.... .....+....+.+++++.|+.+.+..
T Consensus        81 ~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  160 (176)
T d2fzwa2          81 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWK  160 (176)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             CchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCCc
Confidence            54 233444444455568999999999765 4777888889988887755443 22333334445578899998776543


Q ss_pred             chhHHHHHHHHHHHHHHHHHCCc
Q 020487          269 TENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                      .       .+.+.++++++.+|+
T Consensus       161 ~-------~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         161 S-------VESVPKLVSEYMSKK  176 (176)
T ss_dssp             H-------HHHHHHHHHHHHTTS
T ss_pred             H-------HHHHHHHHHHHHcCC
Confidence            2       123444788888875

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.90  E-value=3.3e-22  Score=156.68  Aligned_cols=164  Identities=23%  Similarity=0.344  Sum_probs=131.8

Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      +++++|| +..++++||+++ ++.++++|++|+|+|+ |++|++++|+++.+|++|+++++++++++.++++|++..++.
T Consensus         1 VS~e~Aa-l~ePla~a~~a~-~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGA-LLEPLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHH-THHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHH-HHHHHHHHHHHH-HHhCCCCCCEEEEEcc-cccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEec
Confidence            4678887 456788999998 6778999999999986 999999999999999999999999999999999999887654


Q ss_pred             CC--ch---HHHHHHHHhCCCcccEEEeCCChHH-HHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccc
Q 020487          192 KT--ED---FVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLR  265 (325)
Q Consensus       192 ~~--~~---~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~  265 (325)
                      +.  ..   ..+.+.+.. +.++|++|||+|.+. +..++++++++|+++.+|.+.. ...++...++.+++++.|+...
T Consensus        78 ~~~~~~~~~~~~~~~~~~-g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~-~~~~~~~~~~~k~i~i~gs~~~  155 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAI-GDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ-MVTVPLVNACAREIDIKSVFRY  155 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHS-SSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS-CCCCCHHHHHTTTCEEEECCSC
T ss_pred             cccccccchhhhhhhccc-ccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCC-CCCcCHHHHHHCCCEEEEEECC
Confidence            43  22   233444444 458999999999865 6889999999999999997654 4568888899999999998543


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHCCc
Q 020487          266 SRSTENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                      ...           ++++++++++|+
T Consensus       156 ~~~-----------~~~ai~li~~Gk  170 (170)
T d1e3ja2         156 CND-----------YPIALEMVASGR  170 (170)
T ss_dssp             SSC-----------HHHHHHHHHTTS
T ss_pred             HHH-----------HHHHHHHHHcCC
Confidence            221           122778888775

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.89  E-value=7e-22  Score=155.53  Aligned_cols=171  Identities=16%  Similarity=0.153  Sum_probs=136.2

Q ss_pred             CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      ++++||.+++++.|+|+++.+.+++++|++|+|+|+ |++|++++++++..|+ +|+++++++++++.++++|+++++|+
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~   80 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNP   80 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcC
Confidence            578999999999999999988899999999999998 8899999999999987 89999999999999999999999987


Q ss_pred             CCc-hHHHHHHHHhCCCcccEEEeCCChHH-HHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccc
Q 020487          192 KTE-DFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRST  269 (325)
Q Consensus       192 ~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  269 (325)
                      ++. .......+.+.+.++|+++|++|... +..++..+.+++.++.++.........+...++.++.++.|+.+.....
T Consensus        81 ~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~  160 (175)
T d1cdoa2          81 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKG  160 (175)
T ss_dssp             GGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGCCH
T ss_pred             CCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEeCCcH
Confidence            654 34567777777779999999999865 5677777777766655554444444455566667889999987765532


Q ss_pred             hhHHHHHHHHHHHHHHHHHCCc
Q 020487          270 ENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                             ++.++++++++.+|+
T Consensus       161 -------~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         161 -------KDGVPKMVKAYLDKK  175 (175)
T ss_dssp             -------HHHHHHHHHHHHTTS
T ss_pred             -------HHHHHHHHHHHHcCC
Confidence                   233444778887775

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.88  E-value=1.6e-21  Score=153.60  Aligned_cols=171  Identities=18%  Similarity=0.186  Sum_probs=134.5

Q ss_pred             CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      ++++||.++++++|+|+++.+.++++||++|+|+|+ |++|++++++++..|+ +|++++.++++++.++++|+++++++
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~   80 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEec
Confidence            578999999999999999989999999999999999 8899999999999986 99999999999999999999998876


Q ss_pred             CC-chHHHHHHHHhCCCcccEEEeCCChHH-HHHhhccccCCCEEEEEeccCC-cccccchHHHHhhccEeeeccccccc
Q 020487          192 KT-EDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRSRS  268 (325)
Q Consensus       192 ~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~  268 (325)
                      .+ +.......+.+.+.++|++|||+|... +..++..+++++..+.++.... .........++.+++++.|+.+.+..
T Consensus        81 ~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  160 (176)
T d2jhfa2          81 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFK  160 (176)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             CCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCCC
Confidence            43 444556666666679999999999865 5777888888765655554443 33333344566789999998766543


Q ss_pred             chhHHHHHHHHHHHHHHHHHCCc
Q 020487          269 TENKALIVSEVEKNVWPAIAVGK  291 (325)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~g~  291 (325)
                      .       ++.++++++++.+|+
T Consensus       161 ~-------~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         161 S-------KDSVPKLVADFMAKK  176 (176)
T ss_dssp             H-------HHHHHHHHHHHHTTS
T ss_pred             H-------HHHHHHHHHHHHCcC
Confidence            2       123444777777764

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.88  E-value=1.8e-21  Score=152.59  Aligned_cols=155  Identities=19%  Similarity=0.245  Sum_probs=127.9

Q ss_pred             CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEe
Q 020487          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN  190 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (325)
                      .++++||.++|++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++.+|+ +|++++.++++++.++++|+++++|
T Consensus         2 ~P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in   80 (176)
T d1d1ta2           2 APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECIS   80 (176)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEEC
T ss_pred             cCHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEEC
Confidence            3589999999999999999988899999999999998 9999999999999996 8999999999999999999999998


Q ss_pred             CCCch-HHHHHHHHhCCCcccEEEeCCChHH-HHHhhccccC-CCEEEEEeccCCcc-cccchHHHHhhccEeeeccccc
Q 020487          191 YKTED-FVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNI-DGRLFIIGTQGGAK-TELNITSLFAKRLTVQAAGLRS  266 (325)
Q Consensus       191 ~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~-~g~~v~~g~~~~~~-~~~~~~~~~~~~~~i~~~~~~~  266 (325)
                      +.+.+ ....+.+.+.+.++|++|+++|... +..++..+.+ +|+++.+|...... ..+++.. +.++.++.|+....
T Consensus        81 ~~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~-~~~~~~i~Gs~~G~  159 (176)
T d1d1ta2          81 PKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPML-LFTGRTWKGCVFGG  159 (176)
T ss_dssp             GGGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHH-HHTTCEEEECSGGG
T ss_pred             ccccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHH-HhCCCEEEEEEEeC
Confidence            77544 3566667777779999999999865 5666666655 59999999766543 3344444 44678999987665


Q ss_pred             cc
Q 020487          267 RS  268 (325)
Q Consensus       267 ~~  268 (325)
                      ..
T Consensus       160 ~~  161 (176)
T d1d1ta2         160 LK  161 (176)
T ss_dssp             CC
T ss_pred             CC
Confidence            53

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.87  E-value=1e-22  Score=157.75  Aligned_cols=143  Identities=17%  Similarity=0.230  Sum_probs=120.3

Q ss_pred             hHHHHHHH---HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHH
Q 020487          123 VACTVWST---VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR  199 (325)
Q Consensus       123 ~~~~a~~~---l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  199 (325)
                      ++.|||.+   |.+.....++++|||+|++|++|.+++|+|+.+|++|+++++++++.+.++++|+++++++++.  ...
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~--~~~   81 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDV--YDG   81 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHH--CSS
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccceEeccch--hch
Confidence            45566644   5455566778899999999999999999999999999999999999999999999999875421  112


Q ss_pred             HHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccc
Q 020487          200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR  267 (325)
Q Consensus       200 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  267 (325)
                      ..+.+.++++|++||++|++.+...+++|+++|+++.+|...+...+++..+++.+++++.|......
T Consensus        82 ~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~~~~  149 (167)
T d1tt7a2          82 TLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYC  149 (167)
T ss_dssp             CCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSC
T ss_pred             hhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEecCCC
Confidence            23345667899999999999999999999999999999998887788899999999999999765443

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.85  E-value=1.4e-20  Score=149.85  Aligned_cols=145  Identities=18%  Similarity=0.246  Sum_probs=125.1

Q ss_pred             HhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCC
Q 020487          115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKT  193 (325)
Q Consensus       115 ~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~  193 (325)
                      ++.++|...++|||+++ +.+++++|++|+|+|+ |++|++++++++..|+ +|++++.++++++.++++|+++++++..
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~   79 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLD   79 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSS
T ss_pred             chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCC
Confidence            45677899999999998 6789999999999998 9999999999999998 8999999999999999999999999999


Q ss_pred             chHHHHHHHHhCCCcccEEEeCCCh----------------HHHHHhhccccCCCEEEEEeccCCcc------------c
Q 020487          194 EDFVARVKEETGGKGVDVILDCMGA----------------SYFQRNLGSLNIDGRLFIIGTQGGAK------------T  245 (325)
Q Consensus       194 ~~~~~~~~~~~~~~~~d~vi~~~g~----------------~~~~~~~~~l~~~g~~v~~g~~~~~~------------~  245 (325)
                      .++.+.+.+.+++.++|++|||+|.                ..+..+++.++++|+++.+|.+....            .
T Consensus        80 ~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~  159 (195)
T d1kola2          80 TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSL  159 (195)
T ss_dssp             SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCC
T ss_pred             cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCce
Confidence            9999999999999999999999984                35788999999999999999765431            1


Q ss_pred             ccchHHHHhhccEeee
Q 020487          246 ELNITSLFAKRLTVQA  261 (325)
Q Consensus       246 ~~~~~~~~~~~~~i~~  261 (325)
                      .+++..++.+++++.+
T Consensus       160 ~~~~~~~~~k~~~i~~  175 (195)
T d1kola2         160 SIRFGLGWAKSHSFHT  175 (195)
T ss_dssp             CCCHHHHHHTTCEEEE
T ss_pred             eeeHHHHHhhcceecc
Confidence            2444555667777654

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.68  E-value=6e-16  Score=116.09  Aligned_cols=132  Identities=14%  Similarity=0.171  Sum_probs=99.1

Q ss_pred             EEEEEcCC--CCC--cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCC
Q 020487            2 KAIVITQP--GSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS   77 (325)
Q Consensus         2 ~a~~~~~~--~~~--~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~   77 (325)
                      |+|++...  |.|  ++|++++.+.|+|++|||+||+.|.++++........ .+  .  ......+++|+|++  |+.+
T Consensus         5 k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~~-~~--~--g~~~~g~~vg~Vv~--S~~~   77 (147)
T d1v3va1           5 KSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKR-LK--E--GAVMMGQQVARVVE--SKNS   77 (147)
T ss_dssp             EEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGGG-SC--T--TSBCCCCEEEEEEE--ESCT
T ss_pred             EEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccccccc-cc--c--CCccccceEEEEEE--eCCC
Confidence            67888865  443  6799999999999999999999999998865443321 11  1  12345578999988  7788


Q ss_pred             CCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHH-----hhccCcchHHH-HHHHHHhhcCCCCCCEEEE
Q 020487           78 RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLK-----DAAAFPEVACT-VWSTVFMTSHLSPGESFLV  145 (325)
Q Consensus        78 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~-----~aa~l~~~~~~-a~~~l~~~~~~~~~~~vli  145 (325)
                      +|++||+|.+.   ++|++|.+++.+.+.++|.+.+..     ..+++....+| ||.++...  -+.|++|++
T Consensus        78 ~f~~GD~V~g~---~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~~~--~k~Getvv~  146 (147)
T d1v3va1          78 AFPAGSIVLAQ---SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEMLNG--ANLGKAVVT  146 (147)
T ss_dssp             TSCTTCEEEEC---CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHHHTT--CCSSEEEEE
T ss_pred             cccCCCEEEEc---cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHhhCC--CCCCCEEEe
Confidence            99999999987   789999999999999998765432     34456666666 55566444  367999886

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.51  E-value=1.8e-14  Score=94.59  Aligned_cols=74  Identities=23%  Similarity=0.304  Sum_probs=67.5

Q ss_pred             CCHHhhccCcchHHHHHHHHH---hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCC
Q 020487          112 VSLKDAAAFPEVACTVWSTVF---MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA  185 (325)
Q Consensus       112 ~~~~~aa~l~~~~~~a~~~l~---~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~  185 (325)
                      +|+++|++++.++.|||.+++   +....+++++++|+|++|.+|.+++|+++.+|++|+++++++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHCCC
Confidence            578999999999999998764   44567899999999999999999999999999999999999999999999885

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.34  E-value=1.8e-06  Score=65.16  Aligned_cols=102  Identities=17%  Similarity=0.149  Sum_probs=76.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeC--C------------------CchHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY--K------------------TEDFVA  198 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~--~------------------~~~~~~  198 (325)
                      +.-+|+|+|+ |..|+.+++.|+.+|++|.+.+.+.++++++++++...+...  .                  .....+
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            3457999999 999999999999999999999999999999999886543110  0                  011233


Q ss_pred             HHHHHhCCCcccEEEeCCCh---H----HHHHhhccccCCCEEEEEeccCCc
Q 020487          199 RVKEETGGKGVDVILDCMGA---S----YFQRNLGSLNIDGRLFIIGTQGGA  243 (325)
Q Consensus       199 ~~~~~~~~~~~d~vi~~~g~---~----~~~~~~~~l~~~g~~v~~g~~~~~  243 (325)
                      .+.+...  ..|+||.++-.   .    ....+++.|+||+.+|++....+.
T Consensus       107 ~l~~~l~--~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGG  156 (183)
T d1l7da1         107 AVLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGG  156 (183)
T ss_dssp             HHHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTC
T ss_pred             HHHHHHH--hhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCC
Confidence            4444443  58999988632   1    147889999999999999654443

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.21  E-value=5e-06  Score=61.78  Aligned_cols=97  Identities=13%  Similarity=0.168  Sum_probs=72.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCC--CEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA--DVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      +.-+|+|+|+ |..|+.+++.|+.+|+.|++.+.+.+++++++....  ......+....    .+...  .+|+||.++
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l----~~~~~--~aDivI~aa  103 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEI----ETAVA--EADLLIGAV  103 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHH----HHHHH--TCSEEEECC
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhH----HHhhc--cCcEEEEee
Confidence            3568999999 999999999999999999999999999998886432  22332223232    33322  589999987


Q ss_pred             ChH-------HHHHhhccccCCCEEEEEeccCC
Q 020487          217 GAS-------YFQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       217 g~~-------~~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                      -.+       ....+++.|++|+.+|++....+
T Consensus       104 lipG~~aP~lIt~~mv~~Mk~GSVIVDvaidqG  136 (168)
T d1pjca1         104 LVPGRRAPILVPASLVEQMRTGSVIVDVAVDQG  136 (168)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTC
T ss_pred             ecCCcccCeeecHHHHhhcCCCcEEEEeecCCC
Confidence            421       14788999999999999855443

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.94  E-value=5.2e-05  Score=58.38  Aligned_cols=75  Identities=15%  Similarity=0.213  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-----cC-CCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LG-ADVCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-----~g-~~~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      .|++++|+|++|++|..+++.+...|++|++++++.++.+.+.+     .. .....|..+.   ..+.+..+  ++|++
T Consensus        22 ~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~--~iDil   96 (191)
T d1luaa1          22 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD---ASRAEAVK--GAHFV   96 (191)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH---HHHHHHTT--TCSEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccH---HHHHHHhc--CcCee
Confidence            58999999999999999999999999999999999988765532     22 2233444442   34445554  68999


Q ss_pred             EeCCCh
Q 020487          213 LDCMGA  218 (325)
Q Consensus       213 i~~~g~  218 (325)
                      |++.|.
T Consensus        97 in~Ag~  102 (191)
T d1luaa1          97 FTAGAI  102 (191)
T ss_dssp             EECCCT
T ss_pred             eecCcc
Confidence            999874

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.90  E-value=6.1e-05  Score=60.34  Aligned_cols=78  Identities=19%  Similarity=0.299  Sum_probs=58.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEE-EeCCCch----HHHHHHHHhCCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-INYKTED----FVARVKEETGGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~----~~~~~~~~~~~~~~d~v  212 (325)
                      .|++++|+|+++++|.++++.+...|++|+++.+++++.+.+. ++++..+ .|-.+..    +.+.+.+..+  ++|++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~iDil   81 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLG--RLDGV   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHS--SCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcC--CceEE
Confidence            3789999999999999999999999999999999998887665 4554332 2333322    2333344454  69999


Q ss_pred             EeCCCh
Q 020487          213 LDCMGA  218 (325)
Q Consensus       213 i~~~g~  218 (325)
                      ++++|.
T Consensus        82 VnnAG~   87 (242)
T d1ulsa_          82 VHYAGI   87 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=8.7e-05  Score=59.48  Aligned_cols=78  Identities=21%  Similarity=0.292  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEE--eCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI--NYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .|+++||+|+++++|.++++.+...|++|+++++++++.+.+. +++....+  |-.+....+.+.+..+  ++|+++++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g--~iDilVnn   83 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVG--PVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCC--CCCEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhC--CceEEEec
Confidence            5899999999999999999999999999999999999887654 45443333  4334333344444443  69999998


Q ss_pred             CCh
Q 020487          216 MGA  218 (325)
Q Consensus       216 ~g~  218 (325)
                      .|.
T Consensus        84 Ag~   86 (244)
T d1pr9a_          84 AAV   86 (244)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            864

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=6.4e-05  Score=60.48  Aligned_cols=77  Identities=26%  Similarity=0.404  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEEE--eCCCch----HHHHHHHHhCCCcccE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCI--NYKTED----FVARVKEETGGKGVDV  211 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~--~~~~~~----~~~~~~~~~~~~~~d~  211 (325)
                      .|++++|+|+++++|.++++.+...|++|++..+++++.+.+.+ ++....+  |-.+..    +.+.+.+..+  ++|+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g--~iDi   82 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFG--RLDC   82 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHS--CCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcC--CCCE
Confidence            48999999999999999999999999999999999998877764 4432333  322322    2333444444  6899


Q ss_pred             EEeCCC
Q 020487          212 ILDCMG  217 (325)
Q Consensus       212 vi~~~g  217 (325)
                      +++++|
T Consensus        83 lVnnAG   88 (250)
T d1ydea1          83 VVNNAG   88 (250)
T ss_dssp             EEECCC
T ss_pred             EEeccc
Confidence            999887

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.84  E-value=5.7e-05  Score=60.72  Aligned_cols=78  Identities=27%  Similarity=0.394  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEE-EeCCCch----HHHHHHHHhCCCcccEEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTED----FVARVKEETGGKGVDVIL  213 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~----~~~~~~~~~~~~~~d~vi  213 (325)
                      .|+++||+|+++++|.++++.+...|++|++..++++..+..++.+...+ .|-.+..    ..+.+.+..|  ++|+++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G--~iDiLV   81 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALG--RVDVLV   81 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHS--CCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcC--CCCeEE
Confidence            48999999999999999999999999999999999888877777775432 2333322    2334444454  699999


Q ss_pred             eCCCh
Q 020487          214 DCMGA  218 (325)
Q Consensus       214 ~~~g~  218 (325)
                      +++|.
T Consensus        82 nnAG~   86 (248)
T d2d1ya1          82 NNAAI   86 (248)
T ss_dssp             ECCCC
T ss_pred             EeCcC
Confidence            99874

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.84  E-value=0.00011  Score=58.75  Aligned_cols=78  Identities=18%  Similarity=0.249  Sum_probs=58.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEE--eCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI--NYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .|+++||+|+++++|.++++.+...|++|+++.+++++.+.+. +++....+  |-.+....+.+.+..|  ++|+++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g--~iDilVnn   81 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIG--PVDLLVNN   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCC--CCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcC--CCeEEEEC
Confidence            4899999999999999999999999999999999988876654 44433333  3334333344444443  68999999


Q ss_pred             CCh
Q 020487          216 MGA  218 (325)
Q Consensus       216 ~g~  218 (325)
                      +|.
T Consensus        82 Ag~   84 (242)
T d1cyda_          82 AAL   84 (242)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            874

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.80  E-value=7.7e-05  Score=60.15  Aligned_cols=102  Identities=21%  Similarity=0.360  Sum_probs=71.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEE---eCCCch----HHHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI---NYKTED----FVARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~---~~~~~~----~~~~~~~~~~~~~~d  210 (325)
                      +|++++|+|+++++|.++++.+...|++|+++++++++.+.+. +++.....   |-.+..    ..+.+.+..+  .+|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g--~iD   82 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLG--TLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHC--SCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhC--CCC
Confidence            4889999999999999999999999999999999998876654 56654433   222222    2333444444  689


Q ss_pred             EEEeCCChH-----------H---------------HHHhhcccc-CCCEEEEEeccCC
Q 020487          211 VILDCMGAS-----------Y---------------FQRNLGSLN-IDGRLFIIGTQGG  242 (325)
Q Consensus       211 ~vi~~~g~~-----------~---------------~~~~~~~l~-~~g~~v~~g~~~~  242 (325)
                      +++++.|..           .               ...++..|+ .+|++|.+++...
T Consensus        83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~  141 (253)
T d1hxha_          83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS  141 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh
Confidence            999998741           0               123445554 5799998876553

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.77  E-value=8.3e-05  Score=59.55  Aligned_cols=78  Identities=21%  Similarity=0.349  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE-EE--eCCCch----HHHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTED----FVARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~----~~~~~~~~~~~~~~d  210 (325)
                      .|++++|+|+++++|.++++.+...|++|+++.+++++.+.+. +++... .+  |-.+..    +.+.+.+..+  ++|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~id   82 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFG--GLH   82 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhC--CCe
Confidence            4889999999999999999999999999999999998876654 454322 22  333322    2334444444  699


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      ++++++|.
T Consensus        83 ilinnAG~   90 (244)
T d1nffa_          83 VLVNNAGI   90 (244)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999874

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=4.8e-05  Score=61.10  Aligned_cols=78  Identities=19%  Similarity=0.290  Sum_probs=60.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCE--EEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV--CINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      .|+++||+|+++++|.++++.+...|++|+++.+++++.+.+.+.....  ..|.+.....+...+..+  ..|+++++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~--~id~lVn~a   82 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVE--RLDVLFNVA   82 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCS--CCSEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccc--cceeEEecc
Confidence            4889999999999999999999999999999999998877666533322  334444555555555554  689999998


Q ss_pred             Ch
Q 020487          217 GA  218 (325)
Q Consensus       217 g~  218 (325)
                      |.
T Consensus        83 g~   84 (245)
T d2ag5a1          83 GF   84 (245)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.75  E-value=8.3e-05  Score=59.95  Aligned_cols=78  Identities=28%  Similarity=0.475  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE-EE--eCCCch----HHHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTED----FVARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~----~~~~~~~~~~~~~~d  210 (325)
                      +|++++|+|+++++|.++++.+...|++|+++.+++++.+... +++... .+  |-.+..    +.+.+.+..+  ++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~iD   81 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFG--SVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcC--Ccc
Confidence            4889999999999999999999999999999999998876554 555432 22  333322    2333334444  699


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      ++++++|.
T Consensus        82 ilVnnAg~   89 (254)
T d1hdca_          82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEecCcc
Confidence            99999874

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.75  E-value=7.3e-05  Score=61.15  Aligned_cols=77  Identities=30%  Similarity=0.489  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEE-E--eCCCch----HHHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-I--NYKTED----FVARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~-~--~~~~~~----~~~~~~~~~~~~~~d  210 (325)
                      .|+++||+|+++++|.++++.+...|++|+++.+++++.+.+. +++.... +  |-.+..    ....+.+..+  .+|
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g--~id   81 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFG--KID   81 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhC--Ccc
Confidence            4899999999999999999999999999999999998876654 4554322 2  333322    2333344454  689


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      ++++++|
T Consensus        82 ilvnnAG   88 (276)
T d1bdba_          82 TLIPNAG   88 (276)
T ss_dssp             EEECCCC
T ss_pred             ccccccc
Confidence            9999887

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.75  E-value=8e-05  Score=60.17  Aligned_cols=78  Identities=21%  Similarity=0.382  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH-HHcCCCEEE---eCCCch----HHHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADVCI---NYKTED----FVARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~---~~~~~~----~~~~~~~~~~~~~~d  210 (325)
                      +|++++|+|+++++|.++++.+...|++|+++.+++++.+.+ ++++.....   |-.+..    +.+.+.+..|  ++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g--~iD   81 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWG--SID   81 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS--CCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhC--Ccc
Confidence            378999999999999999999999999999999998877654 466654322   333322    2333334444  699


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      +++++.|.
T Consensus        82 ilVnnAg~   89 (256)
T d1k2wa_          82 ILVNNAAL   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEeeccc
Confidence            99999874

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.73  E-value=1.5e-05  Score=62.50  Aligned_cols=111  Identities=19%  Similarity=0.186  Sum_probs=75.7

Q ss_pred             cCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCEEEeCCCc
Q 020487          119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVCINYKTE  194 (325)
Q Consensus       119 ~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~~~~~~~~  194 (325)
                      .+..+.+.|..  .+...+++|++||.+|+  +.|..++.+++..|.+|+.++..++-.+.+    +++|.+.+.....+
T Consensus        60 ~is~P~~~a~m--l~~L~l~~g~~VLeIGs--GsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd  135 (215)
T d1jg1a_          60 TVSAPHMVAIM--LEIANLKPGMNILEVGT--GSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGD  135 (215)
T ss_dssp             EECCHHHHHHH--HHHHTCCTTCCEEEECC--TTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred             hhhhhhhHHHH--HHhhccCccceEEEecC--CCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECc
Confidence            34445555543  36778999999999995  568888888888888899999887755444    45676554322221


Q ss_pred             hHHHHHHHHhCCCcccEEEeCCChHHH-HHhhccccCCCEEEEE
Q 020487          195 DFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFII  237 (325)
Q Consensus       195 ~~~~~~~~~~~~~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~  237 (325)
                      ...    -......||.|+-+.+.... ...+++|++||+++..
T Consensus       136 ~~~----g~~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         136 GSK----GFPPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             GGG----CCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ccc----CCcccCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence            110    01123479999887776543 5678899999999875

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.72  E-value=0.00011  Score=58.54  Aligned_cols=74  Identities=23%  Similarity=0.263  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      +|+++||+|+++++|.++++.+...|++|+++.++++..+   +.+... +..+-....+.+.+..+  .+|++++++|.
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~---~~~~~~-~~~Dv~~~~~~~~~~~g--~iD~lVnnAG~   76 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK---RSGHRY-VVCDLRKDLDLLFEKVK--EVDILVLNAGG   76 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HTCSEE-EECCTTTCHHHHHHHSC--CCSEEEECCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---hcCCcE-EEcchHHHHHHHHHHhC--CCcEEEecccc
Confidence            4789999999999999999999999999999999876544   444433 32333333555666665  69999999874

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.72  E-value=0.00016  Score=58.35  Aligned_cols=79  Identities=24%  Similarity=0.404  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCE-EE--eCCCchHH----HHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-CI--NYKTEDFV----ARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~~~~----~~~~~~~~~~  207 (325)
                      +|+++||+|+++++|.++++.+...|++|+++++++++.+.+    ++.+... .+  |-......    +.+.+..+ .
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~-g   83 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD-G   83 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC-C
Confidence            589999999999999999999999999999999999876554    3445443 22  33333322    33334443 2


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ..|+++++.|.
T Consensus        84 ~idilinnag~   94 (258)
T d1ae1a_          84 KLNILVNNAGV   94 (258)
T ss_dssp             CCCEEEECCCC
T ss_pred             CcEEEeccccc
Confidence            68999998874

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.71  E-value=8.6e-05  Score=59.46  Aligned_cols=78  Identities=29%  Similarity=0.417  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE---EEeCCCchH----HHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV---CINYKTEDF----VARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~---~~~~~~~~~----~~~~~~~~~~~~~d  210 (325)
                      +|++++|+|+++++|.++++.+...|++|+++.+++++.+.+. +++...   ..|-.+...    .+.+.+..|  ++|
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~iD   80 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFG--EVD   80 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTC--SCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccC--Ccc
Confidence            4889999999999999999999999999999999998877654 444322   233333322    333334444  699


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      ++++++|.
T Consensus        81 ilVnnAg~   88 (243)
T d1q7ba_          81 ILVNNAGI   88 (243)
T ss_dssp             EEEECCCC
T ss_pred             eehhhhhh
Confidence            99999864

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=0.00017  Score=57.60  Aligned_cols=78  Identities=22%  Similarity=0.327  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      .|+.++|+|+++++|..++..+...|++|+++++++++.+.+.    +.|.. ..+  |..+...    .+.+.+..|  
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g--   83 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG--   83 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC--
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC--
Confidence            4899999999999999999999999999999999998876543    45543 222  3333222    233333444  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ..|++++++|.
T Consensus        84 ~idilinnag~   94 (244)
T d1yb1a_          84 DVSILVNNAGV   94 (244)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCceeEeeccc
Confidence            69999999875

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.70  E-value=0.00013  Score=58.24  Aligned_cols=78  Identities=26%  Similarity=0.359  Sum_probs=58.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEE---eCCCch----HHHHHHHHhCCCccc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI---NYKTED----FVARVKEETGGKGVD  210 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~---~~~~~~----~~~~~~~~~~~~~~d  210 (325)
                      .|++++|+|+++++|.++++-+...|++|+++.++.++..... +++.+...   |-....    +.+.+.+..+  ++|
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g--~iD   81 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFG--RLH   81 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHS--CCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhC--Ccc
Confidence            4889999999999999999999999999999999998876554 56754322   333322    2333344444  689


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      ++++++|.
T Consensus        82 iLinnAg~   89 (241)
T d2a4ka1          82 GVAHFAGV   89 (241)
T ss_dssp             EEEEGGGG
T ss_pred             Eecccccc
Confidence            99998864

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.69  E-value=0.00013  Score=58.81  Aligned_cols=78  Identities=19%  Similarity=0.330  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCEE-E--eCCCch----HHHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC-I--NYKTED----FVARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~~-~--~~~~~~----~~~~~~~~~~~~  207 (325)
                      .|++++|+|+++++|.++++.+...|++|+++.+++++.+.+    ++.|.... +  |-.+..    +.+.+.+..|  
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g--   87 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG--   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence            489999999999999999999999999999999998876544    34554432 2  322322    2333444454  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|+++++.|.
T Consensus        88 ~iDilvnnAG~   98 (255)
T d1fmca_          88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEeeeCCcC
Confidence            69999999874

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=0.00017  Score=58.90  Aligned_cols=99  Identities=21%  Similarity=0.287  Sum_probs=67.2

Q ss_pred             CCEE-EEEcCCchHHHHHHHH-HHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCch----HHHHHHHHhCC
Q 020487          140 GESF-LVHGGSSGIGTFAIQM-GKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTED----FVARVKEETGG  206 (325)
Q Consensus       140 ~~~v-li~g~~g~~G~~~~~~-a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~----~~~~~~~~~~~  206 (325)
                      |.+| ||+|+++++|+++++. ++..|++|++++++.++.+.+.    +.+.. ..+  |-.+..    +.+.+.+..+ 
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g-   80 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG-   80 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC-
Confidence            4556 8999999999998875 4556999999999998876543    33432 333  333322    2344545554 


Q ss_pred             CcccEEEeCCChH--------------------------HHHHhhccccCCCEEEEEecc
Q 020487          207 KGVDVILDCMGAS--------------------------YFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       207 ~~~d~vi~~~g~~--------------------------~~~~~~~~l~~~g~~v~~g~~  240 (325)
                       ++|++++++|..                          ....++..|++.|+++.+++.
T Consensus        81 -~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~  139 (275)
T d1wmaa1          81 -GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  139 (275)
T ss_dssp             -SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             -CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence             699999998741                          123556778889999988653

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.68  E-value=0.00019  Score=58.07  Aligned_cols=78  Identities=21%  Similarity=0.318  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCch----HHHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED----FVARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~----~~~~~~~~~~~~  207 (325)
                      .|++++|+|+++++|.+++..+...|++|+++.+++++.+.+.    +.|.+. .+  |-.+..    +.+.+.+..|  
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--   81 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG--   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS--
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC--
Confidence            4899999999999999999999999999999999988776543    345432 22  323322    2334444454  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|+++++.|.
T Consensus        82 ~iDilVnnaG~   92 (260)
T d1zema1          82 KIDFLFNNAGY   92 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCeehhhhcc
Confidence            69999998863

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.67  E-value=0.00018  Score=57.75  Aligned_cols=78  Identities=26%  Similarity=0.380  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH-----HHcCCCEE-E--eCCCch----HHHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-----KDLGADVC-I--NYKTED----FVARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-----~~~g~~~~-~--~~~~~~----~~~~~~~~~~~  206 (325)
                      +|++++|+|+++++|.++++.+...|++|+++.+++++.+..     ++.|.... +  |-.+..    +.+.+.+..| 
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-   82 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG-   82 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC-
Confidence            378999999999999999999999999999999998876543     23454432 2  333322    2334444454 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       ++|++++++|.
T Consensus        83 -~iDiLVnnAG~   93 (251)
T d1vl8a_          83 -KLDTVVNAAGI   93 (251)
T ss_dssp             -CCCEEEECCCC
T ss_pred             -CCCEEEECCCC
Confidence             69999999874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.65  E-value=0.0002  Score=58.16  Aligned_cols=77  Identities=16%  Similarity=0.360  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCC---CEEE--eCCCch----HHHHHHHHhCCCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA---DVCI--NYKTED----FVARVKEETGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~---~~~~--~~~~~~----~~~~~~~~~~~~~  208 (325)
                      .|+++||+|+++++|.++++.+...|++|+++++++++.+.+. +++.   ...+  |-.+..    +.+.+.+..|  .
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~   82 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG--K   82 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS--C
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcC--C
Confidence            4889999999999999999999999999999999998876654 3332   1222  333322    2333334444  6


Q ss_pred             ccEEEeCCC
Q 020487          209 VDVILDCMG  217 (325)
Q Consensus       209 ~d~vi~~~g  217 (325)
                      +|++++++|
T Consensus        83 iD~lVnnAG   91 (268)
T d2bgka1          83 LDIMFGNVG   91 (268)
T ss_dssp             CCEEEECCC
T ss_pred             cceeccccc
Confidence            899999886

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.63  E-value=0.00025  Score=57.22  Aligned_cols=77  Identities=35%  Similarity=0.443  Sum_probs=55.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCEE-E--eCCCchH----HHHHHHHhCCCc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC-I--NYKTEDF----VARVKEETGGKG  208 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~~-~--~~~~~~~----~~~~~~~~~~~~  208 (325)
                      |+.+||+|+++++|.+++..+...|++|+++.+++++.+.+    ++.+.... +  |-.+...    .+.+.+..|  +
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g--~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG--P   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC--S
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhC--C
Confidence            56789999999999999999999999999999998876544    34554432 2  3333222    233334444  6


Q ss_pred             ccEEEeCCCh
Q 020487          209 VDVILDCMGA  218 (325)
Q Consensus       209 ~d~vi~~~g~  218 (325)
                      +|++++++|.
T Consensus        80 iDilVnnAG~   89 (257)
T d2rhca1          80 VDVLVNNAGR   89 (257)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEecccc
Confidence            9999999874

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.61  E-value=0.00027  Score=56.95  Aligned_cols=77  Identities=25%  Similarity=0.399  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----Hc--CCCE-EE--eCCCch----HHHHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DL--GADV-CI--NYKTED----FVARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~--g~~~-~~--~~~~~~----~~~~~~~~~~  205 (325)
                      .|++++|+|+++++|.++++.+...|++|+++.+++++.+...    +.  +... .+  |-.+..    +.+.+.+..|
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            3789999999999999999999999999999999998765543    22  2222 12  333322    2333444455


Q ss_pred             CCcccEEEeCCC
Q 020487          206 GKGVDVILDCMG  217 (325)
Q Consensus       206 ~~~~d~vi~~~g  217 (325)
                        ++|++++++|
T Consensus        83 --~iDiLVnnAG   92 (258)
T d1iy8a_          83 --RIDGFFNNAG   92 (258)
T ss_dssp             --CCSEEEECCC
T ss_pred             --CCCEEEECCc
Confidence              6999999886

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.61  E-value=0.00024  Score=57.36  Aligned_cols=79  Identities=20%  Similarity=0.333  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHHHHH----HHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVARV----KEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~~~----~~~~~~~  207 (325)
                      .|+++||+|+++++|.++++.+...|++|++..+++++.+.+.    +.+... .+  |-.+....+.+    .+..+ .
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~-~   85 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH-G   85 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT-T
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC-C
Confidence            4899999999999999999999999999999999988876543    334332 22  33333322222    22333 2


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      .+|+++++.|.
T Consensus        86 ~idilvnnAG~   96 (259)
T d2ae2a_          86 KLNILVNNAGI   96 (259)
T ss_dssp             CCCEEEECCCC
T ss_pred             CceEEEECCce
Confidence            58999999874

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.61  E-value=7.3e-05  Score=60.18  Aligned_cols=79  Identities=24%  Similarity=0.347  Sum_probs=57.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHHHcCCC--EEE--eCCCch----HHHHHHHHhCCCcc
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGAD--VCI--NYKTED----FVARVKEETGGKGV  209 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~~~g~~--~~~--~~~~~~----~~~~~~~~~~~~~~  209 (325)
                      ..+|||+|+++++|.++++.+...|+  +|++++|+.++.+.+++....  +++  |-.+..    +.+.+.+..+..++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            47899999999999999998888885  799999999988887764332  223  333322    34444455555569


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |++++++|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999874

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.58  E-value=0.00024  Score=57.03  Aligned_cols=78  Identities=19%  Similarity=0.331  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCC--C-EEE--eCCCch----HHHHHHHHhCCCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--D-VCI--NYKTED----FVARVKEETGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~--~-~~~--~~~~~~----~~~~~~~~~~~~~  208 (325)
                      .|++++|+|+++++|.++++.+...|++|+++.+++++.+.+. +++.  . ..+  |-.+..    +.+.+.+..|  +
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G--~   82 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG--P   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS--S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhC--C
Confidence            3899999999999999999999999999999999988876654 3332  2 222  333322    3344444555  6


Q ss_pred             ccEEEeCCCh
Q 020487          209 VDVILDCMGA  218 (325)
Q Consensus       209 ~d~vi~~~g~  218 (325)
                      +|++++++|.
T Consensus        83 iDiLVnnAg~   92 (251)
T d1zk4a1          83 VSTLVNNAGI   92 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             ceEEEecccc
Confidence            9999999874

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=0.0003  Score=56.65  Aligned_cols=78  Identities=22%  Similarity=0.334  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCC-CEE--E--eCCCch----HHHHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA-DVC--I--NYKTED----FVARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~-~~~--~--~~~~~~----~~~~~~~~~~  205 (325)
                      +|+++||+|+++++|.+++..+...|++|+++.+++++.+.+.    +.+. ..+  +  |-.+..    +.+.+.+..+
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            3789999999999999999999999999999999988876543    3332 222  2  333322    3344445554


Q ss_pred             CCcccEEEeCCCh
Q 020487          206 GKGVDVILDCMGA  218 (325)
Q Consensus       206 ~~~~d~vi~~~g~  218 (325)
                        ++|++++++|.
T Consensus        89 --~iD~lVnnAg~   99 (257)
T d1xg5a_          89 --GVDICINNAGL   99 (257)
T ss_dssp             --CCSEEEECCCC
T ss_pred             --CCCEEEecccc
Confidence              69999999874

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.55  E-value=0.00037  Score=55.75  Aligned_cols=78  Identities=19%  Similarity=0.326  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH--HHHHHcCCCEE-E--eCCCch----HHHHHHHHhCCCcc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL--AVCKDLGADVC-I--NYKTED----FVARVKEETGGKGV  209 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~--~~~~~~g~~~~-~--~~~~~~----~~~~~~~~~~~~~~  209 (325)
                      +|++++|+|+++++|.++++.+...|++|+++.+++.+.  ..+++.|.... +  |-.+..    +.+.+.+..|  ++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G--~i   81 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFG--RC   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS--CC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC--CC
Confidence            378999999999999999999999999999999876533  34456665432 2  333322    2333444454  69


Q ss_pred             cEEEeCCCh
Q 020487          210 DVILDCMGA  218 (325)
Q Consensus       210 d~vi~~~g~  218 (325)
                      |++++++|.
T Consensus        82 DilVnnAG~   90 (247)
T d2ew8a1          82 DILVNNAGI   90 (247)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.54  E-value=0.00029  Score=56.82  Aligned_cols=79  Identities=25%  Similarity=0.392  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-E--EeCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~----~~~~~~~~~~~  207 (325)
                      +|++++|+|+++++|.++++.+...|++|+++.+++++.+.+.    +.+... .  .|-.....    .+.+.+..++ 
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g-   85 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG-   85 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCC-
Confidence            4899999999999999999999999999999999988776543    233332 2  23333222    2233333332 


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      .+|+++++.|.
T Consensus        86 ~idilvnnAG~   96 (259)
T d1xq1a_          86 KLDILINNLGA   96 (259)
T ss_dssp             CCSEEEEECCC
T ss_pred             Ccccccccccc
Confidence            58999999874

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=0.00026  Score=56.97  Aligned_cols=78  Identities=23%  Similarity=0.351  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc----C-CCE-EE--eCCCch----HHHHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----G-ADV-CI--NYKTED----FVARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~----g-~~~-~~--~~~~~~----~~~~~~~~~~  205 (325)
                      .|+++||+|+++++|.++++.+...|++|+++.++.++.+.+. ++    + ... .+  |-.+..    +.+.+.+..|
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4889999999999999999999999999999999998876553 22    1 111 22  333322    2333334444


Q ss_pred             CCcccEEEeCCCh
Q 020487          206 GKGVDVILDCMGA  218 (325)
Q Consensus       206 ~~~~d~vi~~~g~  218 (325)
                        ++|++++++|.
T Consensus        82 --~iDilVnnAg~   92 (254)
T d2gdza1          82 --RLDILVNNAGV   92 (254)
T ss_dssp             --CCCEEEECCCC
T ss_pred             --CcCeecccccc
Confidence              69999999985

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.51  E-value=0.00026  Score=57.15  Aligned_cols=78  Identities=23%  Similarity=0.355  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh-hHH----HHHHcCCCEE-E--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLA----VCKDLGADVC-I--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~-~~~----~~~~~g~~~~-~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .|++++|+|+++++|.++++.+...|++|+++.++.+ ..+    ++++.+.+.. +  |-.+...    .+.+.+..| 
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G-   84 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG-   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC-
Confidence            4789999999999999999999999999999998754 332    3344554322 2  3333222    333334444 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       ++|++++++|.
T Consensus        85 -~iDiLVnnAG~   95 (261)
T d1geea_          85 -KLDVMINNAGL   95 (261)
T ss_dssp             -CCCEEEECCCC
T ss_pred             -CCCEeecccee
Confidence             69999999874

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.51  E-value=0.00034  Score=56.14  Aligned_cols=78  Identities=17%  Similarity=0.266  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCEE-E--eCCCchH----HHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC-I--NYKTEDF----VARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~~-~--~~~~~~~----~~~~~~~~~~~  207 (325)
                      +++.+||+|+++++|.+++..+...|++|+++.+++++.+.+.    +.|.... +  |-.+...    .+.+.+..|  
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g--   86 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK--   86 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS--
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcC--
Confidence            3788999999999999999999999999999999988775443    3454322 2  3333222    233333334  


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|+++++.|.
T Consensus        87 ~iDilvnnag~   97 (251)
T d2c07a1          87 NVDILVNNAGI   97 (251)
T ss_dssp             CCCEEEECCCC
T ss_pred             Cceeeeecccc
Confidence            69999998864

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.49  E-value=7.2e-05  Score=58.62  Aligned_cols=105  Identities=21%  Similarity=0.145  Sum_probs=70.9

Q ss_pred             hHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHHH----cCCCEEE--eCCCc
Q 020487          123 VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGADVCI--NYKTE  194 (325)
Q Consensus       123 ~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~~----~g~~~~~--~~~~~  194 (325)
                      +...|.  +.+...+++|++||-+|+ | .|..++.+++..|  .+|+.++.+++..+.+++    .+.+.+.  ..+..
T Consensus        61 P~~~a~--~l~~l~l~~g~~VLdiG~-G-tG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~  136 (213)
T d1dl5a1          61 PSLMAL--FMEWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGY  136 (213)
T ss_dssp             HHHHHH--HHHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG
T ss_pred             chhhHH--HHHhhhccccceEEEecC-c-cchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchH
Confidence            444444  346778999999999997 3 4888888888775  589999999887766653    3443322  21111


Q ss_pred             hHHHHHHHHhCCCcccEEEeCCChHHH-HHhhccccCCCEEEEE
Q 020487          195 DFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFII  237 (325)
Q Consensus       195 ~~~~~~~~~~~~~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~  237 (325)
                      ..      ......||.|+.+.+...+ ..+++.|+|||+++..
T Consensus       137 ~~------~~~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         137 YG------VPEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             GC------CGGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             Hc------cccccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            10      1112369999987765443 5667889999999874

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=0.0005  Score=56.55  Aligned_cols=78  Identities=26%  Similarity=0.408  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc--------CCCEE-E--eCCCchH----HHHHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--------GADVC-I--NYKTEDF----VARVKE  202 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~--------g~~~~-~--~~~~~~~----~~~~~~  202 (325)
                      +|+++||+|+++++|.++++.+...|++|+++.++.++.+.+. ++        +.... +  |-.+...    .+.+.+
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   90 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   90 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999988765432 21        22222 2  3233222    233334


Q ss_pred             HhCCCcccEEEeCCCh
Q 020487          203 ETGGKGVDVILDCMGA  218 (325)
Q Consensus       203 ~~~~~~~d~vi~~~g~  218 (325)
                      ..|  ++|+++++.|.
T Consensus        91 ~~G--~iDiLVnnAg~  104 (297)
T d1yxma1          91 TFG--KINFLVNNGGG  104 (297)
T ss_dssp             HHS--CCCEEEECCCC
T ss_pred             HhC--CeEEEEeeccc
Confidence            444  69999999874

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.47  E-value=3.4e-05  Score=62.63  Aligned_cols=110  Identities=18%  Similarity=0.271  Sum_probs=75.3

Q ss_pred             cCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHHH----cCC-CEE-Ee
Q 020487          119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGA-DVC-IN  190 (325)
Q Consensus       119 ~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~~----~g~-~~~-~~  190 (325)
                      ...++--.++  +....+++||++||=.|+  +.|..+..+|+..|  .+|+.++.+++..+.+++    ++. +.+ +.
T Consensus        85 qiiypkd~~~--Ii~~l~i~pG~~VLDiG~--GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~  160 (266)
T d1o54a_          85 QIVYPKDSSF--IAMMLDVKEGDRIIDTGV--GSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIK  160 (266)
T ss_dssp             CCCCHHHHHH--HHHHTTCCTTCEEEEECC--TTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEE
T ss_pred             cccchHHHHH--HHHhhCCCCCCEEEECCC--CCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEE
Confidence            4444544444  346789999999999997  34888888888874  699999999998776653    443 222 22


Q ss_pred             CCCchHHHHHHHHhCCCcccEEEeCCChH--HHHHhhccccCCCEEEEEe
Q 020487          191 YKTEDFVARVKEETGGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g  238 (325)
                      ..+.      .+......+|.|+--.+.+  .+..+.+.|+|||+++.+.
T Consensus       161 ~~d~------~~~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         161 VRDI------SEGFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             CCCG------GGCCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             eccc------cccccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence            2221      1123344688877666653  4788999999999999874

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.47  E-value=0.0004  Score=56.44  Aligned_cols=78  Identities=26%  Similarity=0.452  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC----EEE--eCCCch----HHHHHHHHh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD----VCI--NYKTED----FVARVKEET  204 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~----~~~--~~~~~~----~~~~~~~~~  204 (325)
                      .|++++|+|+++++|.++++.+...|++|+++.+++++.+.+.    +.+..    ..+  |-.+..    +.+.+.+..
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3789999999999999999999999999999999998876553    23321    122  333322    233334444


Q ss_pred             CCCcccEEEeCCCh
Q 020487          205 GGKGVDVILDCMGA  218 (325)
Q Consensus       205 ~~~~~d~vi~~~g~  218 (325)
                      |  ++|++++++|.
T Consensus        84 g--~iDilvnnAG~   95 (272)
T d1xkqa_          84 G--KIDVLVNNAGA   95 (272)
T ss_dssp             S--CCCEEEECCCC
T ss_pred             C--CceEEEeCCcc
Confidence            4  68999998763

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.47  E-value=0.00026  Score=57.15  Aligned_cols=78  Identities=19%  Similarity=0.346  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH-----HHcCCCEE-E--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-----KDLGADVC-I--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-----~~~g~~~~-~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .|+++||+|+++++|.++++.+...|++|+++.+++++...+     ++.|.... +  |-.+...    .+.+.+..| 
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g-   86 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG-   86 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhC-
Confidence            378999999999999999999999999999999988766433     23454422 2  3333332    233333443 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       ++|+++++.|.
T Consensus        87 -~iDilVnnAg~   97 (260)
T d1h5qa_          87 -PISGLIANAGV   97 (260)
T ss_dssp             -SEEEEEECCCC
T ss_pred             -CCcEecccccc
Confidence             69999999873

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.46  E-value=0.00035  Score=52.30  Aligned_cols=71  Identities=18%  Similarity=0.256  Sum_probs=54.5

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      +..++.++.+|+|+|+ |+.+.+++..++..|+ +++++.|+.++.+.+. .++... ++...            ...+|
T Consensus        10 ~~~~~~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~-~~~~~------------~~~~D   75 (167)
T d1npya1          10 EKYHLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY-INSLE------------NQQAD   75 (167)
T ss_dssp             HHTTCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE-ESCCT------------TCCCS
T ss_pred             HHcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh-hhccc------------ccchh
Confidence            5556677889999998 9999999999999998 8999999999877665 454433 22111            13689


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      ++++|++
T Consensus        76 liINaTp   82 (167)
T d1npya1          76 ILVNVTS   82 (167)
T ss_dssp             EEEECSS
T ss_pred             hheeccc
Confidence            9999976

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.46  E-value=0.00047  Score=56.67  Aligned_cols=78  Identities=17%  Similarity=0.380  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-----HcCCCE-EE--eCCCchH----HHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-----DLGADV-CI--NYKTEDF----VARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-----~~g~~~-~~--~~~~~~~----~~~~~~~~~~  206 (325)
                      .|+++||+|+++++|.++++.+...|++|+++.++.++.+...     +.|... .+  |-.+...    ...+.+..+ 
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g-  102 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG-  102 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc-
Confidence            3799999999999999999999999999999999988764432     334432 33  2222222    222233333 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       ++|+++++.|.
T Consensus       103 -~iDilvnnAg~  113 (294)
T d1w6ua_         103 -HPNIVINNAAG  113 (294)
T ss_dssp             -SCSEEEECCCC
T ss_pred             -ccchhhhhhhh
Confidence             68999999874

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.46  E-value=0.0005  Score=55.86  Aligned_cols=77  Identities=23%  Similarity=0.441  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC----EEE--eCCCch----HHHHHHHHh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD----VCI--NYKTED----FVARVKEET  204 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~----~~~--~~~~~~----~~~~~~~~~  204 (325)
                      .|++++|+|+++++|.++++.+...|++|+++.+++++.+.+.    +.+..    ..+  |-.+..    ..+.+.+..
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            4889999999999999999999999999999999988776543    33321    122  333332    233334444


Q ss_pred             CCCcccEEEeCCC
Q 020487          205 GGKGVDVILDCMG  217 (325)
Q Consensus       205 ~~~~~d~vi~~~g  217 (325)
                      |  .+|+++++.|
T Consensus        83 G--~iDilVnnAG   93 (274)
T d1xhla_          83 G--KIDILVNNAG   93 (274)
T ss_dssp             S--CCCEEEECCC
T ss_pred             C--CceEEEeecc
Confidence            4  6899999876

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.46  E-value=0.00043  Score=55.81  Aligned_cols=78  Identities=19%  Similarity=0.365  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh-hhHHHHH-----HcCCCEEE---eCCCch----HHHHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAVCK-----DLGADVCI---NYKTED----FVARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~-~~~~~~~-----~~g~~~~~---~~~~~~----~~~~~~~~~~  205 (325)
                      +|+++||+|+++++|.++++.+...|++|+++.+++ +..+.+.     ..|.....   |-.+..    +.+.+.+..|
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999874 3333322     23444332   333322    2333444455


Q ss_pred             CCcccEEEeCCCh
Q 020487          206 GKGVDVILDCMGA  218 (325)
Q Consensus       206 ~~~~d~vi~~~g~  218 (325)
                        ++|++++++|.
T Consensus        83 --~iDiLVnnAG~   93 (260)
T d1x1ta1          83 --RIDILVNNAGI   93 (260)
T ss_dssp             --CCSEEEECCCC
T ss_pred             --CCcEEEeeccc
Confidence              69999999874

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.45  E-value=0.00037  Score=56.19  Aligned_cols=100  Identities=24%  Similarity=0.335  Sum_probs=67.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh-hhHH----HHHHcCCCEE-E--eCCCc----hHHHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLA----VCKDLGADVC-I--NYKTE----DFVARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~-~~~~----~~~~~g~~~~-~--~~~~~----~~~~~~~~~~~~  206 (325)
                      .|+++||+|+++++|.++++.+...|++|++..++. +..+    ++++.|.+.. +  |..+.    .....+.+..+ 
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g-   83 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG-   83 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC-
Confidence            489999999999999999999999999999876444 3333    3345665533 2  32221    22344444555 


Q ss_pred             CcccEEEeCCChH--------------------------HHHHhhccccCCCEEEEEecc
Q 020487          207 KGVDVILDCMGAS--------------------------YFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       207 ~~~d~vi~~~g~~--------------------------~~~~~~~~l~~~g~~v~~g~~  240 (325)
                       ++|+++++.|..                          .+..++..|+.+|+++.+...
T Consensus        84 -~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~  142 (259)
T d1ja9a_          84 -GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSI  142 (259)
T ss_dssp             -CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             -CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccc
Confidence             699999998741                          123455677778888777543

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.44  E-value=0.00058  Score=54.86  Aligned_cols=75  Identities=23%  Similarity=0.351  Sum_probs=53.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCEE-E--eCCCch----HHHHHHHHhCCCccc
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC-I--NYKTED----FVARVKEETGGKGVD  210 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~~-~--~~~~~~----~~~~~~~~~~~~~~d  210 (325)
                      .+||+|+++++|.+++..+...|++|+++.+++++.+.+    ++.|.+.. +  |-.+..    +.+.+.+..|  ++|
T Consensus         3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~iD   80 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLG--GFD   80 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTT--CCC
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC--Ccc
Confidence            469999999999999999999999999999999877554    34554432 2  333322    2333334444  699


Q ss_pred             EEEeCCCh
Q 020487          211 VILDCMGA  218 (325)
Q Consensus       211 ~vi~~~g~  218 (325)
                      ++++++|.
T Consensus        81 ilVnnAG~   88 (255)
T d1gega_          81 VIVNNAGV   88 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999874

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=0.00045  Score=56.02  Aligned_cols=43  Identities=35%  Similarity=0.379  Sum_probs=39.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  181 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~  181 (325)
                      +|+++||+||++++|.+++..+...|++|+++.+++++.+.+.
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~   55 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV   55 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            4899999999999999999999999999999999999887654

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.42  E-value=1.5e-05  Score=63.85  Aligned_cols=74  Identities=28%  Similarity=0.324  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCch----HHHHHHHHhCCCcccEEEe
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED----FVARVKEETGGKGVDVILD  214 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~d~vi~  214 (325)
                      .|+++||+|+++++|.++++.+...|++|+++.++++..+.+..    ...|-.+..    +.+.+.+..+  ++|++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~----~~~Dv~~~~~v~~~~~~~~~~~g--~iDiLVn   79 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFG----VEVDVTDSDAVDRAFTAVEEHQG--PVEVLVS   79 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEE----EECCTTCHHHHHHHHHHHHHHHS--SCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCceE----EEEecCCHHHHHHHHHHHHHhcC--CceEEEe
Confidence            47899999999999999999999999999999988765432211    122333322    2334444454  6999999


Q ss_pred             CCCh
Q 020487          215 CMGA  218 (325)
Q Consensus       215 ~~g~  218 (325)
                      ++|.
T Consensus        80 nAG~   83 (237)
T d1uzma1          80 NAGL   83 (237)
T ss_dssp             ECSC
T ss_pred             eecc
Confidence            9874

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.41  E-value=2.8e-05  Score=62.19  Aligned_cols=99  Identities=23%  Similarity=0.279  Sum_probs=66.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCC------chHHHHHHHHhCCCcccEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT------EDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~d~v  212 (325)
                      +|++|||+|+++++|.++++.+...|++|+.+++++.+..     ..........      +.....+.+..+..++|++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~l   75 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   75 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceEE
Confidence            4789999999999999999999999999999987654321     1111111111      1223344455566679999


Q ss_pred             EeCCCh------------HH---------------HHHhhccccCCCEEEEEeccCC
Q 020487          213 LDCMGA------------SY---------------FQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       213 i~~~g~------------~~---------------~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                      ++++|.            +.               ...++..|+++|+++.+++...
T Consensus        76 InnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~  132 (236)
T d1dhra_          76 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA  132 (236)
T ss_dssp             EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH
Confidence            999873            00               1234456788999999976553

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.41  E-value=0.00073  Score=54.24  Aligned_cols=102  Identities=21%  Similarity=0.266  Sum_probs=68.4

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCEEEeCC--Cch----HHHHHHHHhCC
Q 020487          139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCINYK--TED----FVARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g--~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~--~~~----~~~~~~~~~~~  206 (325)
                      .|+++||+|++|  ++|.++++.+...|++|++..++++..+.++    ..+....+..+  +..    +.+.+.+..+ 
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-   85 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG-   85 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC-
Confidence            488999999976  7999999999999999999998877554443    23444444333  222    2333444455 


Q ss_pred             CcccEEEeCCChH---------------H---------------HHHhhccccCCCEEEEEeccCC
Q 020487          207 KGVDVILDCMGAS---------------Y---------------FQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       207 ~~~d~vi~~~g~~---------------~---------------~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                       ++|+++++.|..               .               .......++++|+++.+++...
T Consensus        86 -~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~  150 (256)
T d1ulua_          86 -GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS  150 (256)
T ss_dssp             -SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG
T ss_pred             -CceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHh
Confidence             699999988630               0               1133456677899998876554

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.39  E-value=0.0011  Score=49.24  Aligned_cols=86  Identities=10%  Similarity=0.020  Sum_probs=63.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCC-CEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA-DVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  220 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~  220 (325)
                      +|.|+|. |.+|...+..++..|.+|++.++++++.+.+++.+. +...+. .+.        .  +..|+||-|+....
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~-~~~--------~--~~~DiIilavp~~~   69 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQD-LSL--------L--QTAKIIFLCTPIQL   69 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESC-GGG--------G--TTCSEEEECSCHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeee-ccc--------c--cccccccccCcHhh
Confidence            6889998 999999999999999999999999999998888875 333322 111        1  26899999998654


Q ss_pred             H----HHhhccccCCCEEEEEec
Q 020487          221 F----QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       221 ~----~~~~~~l~~~g~~v~~g~  239 (325)
                      .    ..+...++++.-++.++.
T Consensus        70 ~~~vl~~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          70 ILPTLEKLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             HHHHHHHHGGGSCTTCEEEECCS
T ss_pred             hhhhhhhhhhhcccccceeeccc
Confidence            3    444455566666666643

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.39  E-value=0.00071  Score=54.63  Aligned_cols=78  Identities=21%  Similarity=0.385  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC----EEE--eCCCch----HHHHHHHHh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD----VCI--NYKTED----FVARVKEET  204 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~----~~~--~~~~~~----~~~~~~~~~  204 (325)
                      .|+.+||+|+++++|.++++.+...|++|+++.+++++.+.+.    +.+..    ..+  |-.+..    ..+.+.+..
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999988776543    33321    222  333322    233333444


Q ss_pred             CCCcccEEEeCCCh
Q 020487          205 GGKGVDVILDCMGA  218 (325)
Q Consensus       205 ~~~~~d~vi~~~g~  218 (325)
                      |  ++|++++++|.
T Consensus        84 g--~iDilvnnAG~   95 (264)
T d1spxa_          84 G--KLDILVNNAGA   95 (264)
T ss_dssp             S--CCCEEEECCC-
T ss_pred             C--CCCEeeccccc
Confidence            4  68999999873

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.38  E-value=0.00038  Score=55.91  Aligned_cols=78  Identities=12%  Similarity=0.161  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCCEE----EeCC-Cc-h---HHHHHHHHhC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVC----INYK-TE-D---FVARVKEETG  205 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~----~~~~-~~-~---~~~~~~~~~~  205 (325)
                      .|+++||+|+++++|.+++..+...|++|+++.++.++.+.+.+    .+...+    .|.. .. .   +.+.+.+..+
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            38899999999999999999999999999999877665544432    222222    2322 21 1   2334444444


Q ss_pred             CCcccEEEeCCCh
Q 020487          206 GKGVDVILDCMGA  218 (325)
Q Consensus       206 ~~~~d~vi~~~g~  218 (325)
                        ++|++++++|.
T Consensus        84 --~iDilvnnAG~   94 (254)
T d1sbya1          84 --TVDILINGAGI   94 (254)
T ss_dssp             --CCCEEEECCCC
T ss_pred             --CCCEEEeCCCC
Confidence              69999999985

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.36  E-value=0.00061  Score=55.31  Aligned_cols=101  Identities=23%  Similarity=0.331  Sum_probs=68.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh-hHH----HHHHcCCCEEE---eCCCch----HHHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLA----VCKDLGADVCI---NYKTED----FVARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~-~~~----~~~~~g~~~~~---~~~~~~----~~~~~~~~~~~  206 (325)
                      .|+++||+|+++++|.++++.+...|++|++.+++.+ ..+    .+++.+.+...   |..+..    ..+.+.+..+ 
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g-   95 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG-   95 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC-
Confidence            3899999999999999999999999999999987643 333    33455654332   333322    2334444454 


Q ss_pred             CcccEEEeCCChH--------------------------HHHHhhccccCCCEEEEEeccC
Q 020487          207 KGVDVILDCMGAS--------------------------YFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       207 ~~~d~vi~~~g~~--------------------------~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                       ++|+++++.|..                          ....++..|.++|+++.++...
T Consensus        96 -~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~  155 (272)
T d1g0oa_          96 -KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT  155 (272)
T ss_dssp             -CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGG
T ss_pred             -CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccc
Confidence             689999988641                          0234566778889988886543

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.36  E-value=2.4e-05  Score=62.95  Aligned_cols=102  Identities=20%  Similarity=0.147  Sum_probs=71.4

Q ss_pred             HHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHH
Q 020487          128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARV  200 (325)
Q Consensus       128 ~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~  200 (325)
                      +..|....+++||++||=+|+  +.|..+..+++..|++|+.++.+++..+.+++    .|..   .+...+...     
T Consensus        22 ~~~l~~~~~l~pg~~VLDiGC--G~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~-----   94 (245)
T d1nkva_          22 YATLGRVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG-----   94 (245)
T ss_dssp             HHHHHHHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT-----
T ss_pred             HHHHHHHcCCCCCCEEEEEcC--CCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhh-----
Confidence            334568889999999999996  45677778888889999999999887766553    4432   222222221     


Q ss_pred             HHHhCCCcccEEEeCCCh-------HHHHHhhccccCCCEEEEEe
Q 020487          201 KEETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       201 ~~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~g~~v~~g  238 (325)
                        ....+.||+|+..-..       ..+..+.+.|+|||+++...
T Consensus        95 --~~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          95 --YVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             --CCCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             --ccccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence              1234579999854321       34678889999999998764

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=0.00025  Score=55.00  Aligned_cols=96  Identities=13%  Similarity=0.153  Sum_probs=65.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      .++|+|+||+|.+|..++..+...|.+|++++|+.++.......+. .++..+..+ .+.+.+.+.  +.|+||.++|..
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~gD~~d-~~~l~~al~--~~d~vi~~~g~~   78 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPA-HVVVGDVLQ-AADVDKTVA--GQDAVIVLLGTR   78 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCS-EEEESCTTS-HHHHHHHHT--TCSEEEECCCCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccccccc-ccccccccc-hhhHHHHhc--CCCEEEEEeccC
Confidence            4689999999999999999888889999999999887654433344 344444333 334555554  589999998742


Q ss_pred             -----------HHHHhhccccCC--CEEEEEec
Q 020487          220 -----------YFQRNLGSLNID--GRLFIIGT  239 (325)
Q Consensus       220 -----------~~~~~~~~l~~~--g~~v~~g~  239 (325)
                                 ....+++.++..  .+++.++.
T Consensus        79 ~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          79 NDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             CchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence                       123444454443  37777654

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.27  E-value=0.00088  Score=55.18  Aligned_cols=78  Identities=22%  Similarity=0.325  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh---------hhHHH----HHHcCCCEEEeCCCch----HHHHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---------EKLAV----CKDLGADVCINYKTED----FVARVK  201 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~---------~~~~~----~~~~g~~~~~~~~~~~----~~~~~~  201 (325)
                      .|+++||+|+++++|.+++..+...|++|++.+++.         +..+.    ....+.....+..+..    ..+.+.
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            488999999999999999999999999999986542         22222    2234444445544432    233333


Q ss_pred             HHhCCCcccEEEeCCCh
Q 020487          202 EETGGKGVDVILDCMGA  218 (325)
Q Consensus       202 ~~~~~~~~d~vi~~~g~  218 (325)
                      +..|  ++|++++++|.
T Consensus        86 ~~~G--~iDiLVnNAGi  100 (302)
T d1gz6a_          86 DTFG--RIDVVVNNAGI  100 (302)
T ss_dssp             HHTS--CCCEEEECCCC
T ss_pred             HHcC--CCCEEEECCcc
Confidence            4444  69999999874

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.26  E-value=0.00072  Score=55.31  Aligned_cols=102  Identities=20%  Similarity=0.209  Sum_probs=71.2

Q ss_pred             HHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCEE--EeCCCchHHHHHH
Q 020487          128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC--INYKTEDFVARVK  201 (325)
Q Consensus       128 ~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~~--~~~~~~~~~~~~~  201 (325)
                      ..-+.+++++++|++||=+|+  ++|..+..+|+..|++|+.++.+++..+.++    +.|....  +...+..      
T Consensus        50 ~~~~~~~l~l~~G~~VLDiGC--G~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~~------  121 (291)
T d1kpia_          50 RKLALDKLNLEPGMTLLDIGC--GWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE------  121 (291)
T ss_dssp             HHHHHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCGG------
T ss_pred             HHHHHHhcCCCCCCEEEEecC--cchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhhccc------
Confidence            334558889999999999996  5777888999999999999999999866554    3443321  1111111      


Q ss_pred             HHhCCCcccEEEe-----CCCh-----------HHHHHhhccccCCCEEEEEec
Q 020487          202 EETGGKGVDVILD-----CMGA-----------SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       202 ~~~~~~~~d~vi~-----~~g~-----------~~~~~~~~~l~~~g~~v~~g~  239 (325)
                        .....||.|+.     .++.           ..+..+.+.|+|||++++-..
T Consensus       122 --~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~i  173 (291)
T d1kpia_         122 --EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI  173 (291)
T ss_dssp             --GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEEE
T ss_pred             --ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEEE
Confidence              12347998864     3332           236778899999999987644

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.24  E-value=7.3e-05  Score=61.23  Aligned_cols=100  Identities=18%  Similarity=0.200  Sum_probs=69.9

Q ss_pred             HHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCC-CEE-EeCCCchHHHHHHHH
Q 020487          130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA-DVC-INYKTEDFVARVKEE  203 (325)
Q Consensus       130 ~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~-~~~-~~~~~~~~~~~~~~~  203 (325)
                      -+.++++++||++||=+|+  +.|..++.+++..|++|+.++.+++..+.+++    .|. +.+ +...+  +    .+.
T Consensus        53 ~~~~~l~l~~G~~VLDiGC--G~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d--~----~~~  124 (285)
T d1kpga_          53 LALGKLGLQPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG--W----EQF  124 (285)
T ss_dssp             HHHTTTTCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC--G----GGC
T ss_pred             HHHHHcCCCCCCEEEEecC--cchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhh--h----hcc
Confidence            3557889999999999996  67899999999999999999999998877754    221 111 11111  1    111


Q ss_pred             hCCCcccEEEe-----CCChH----HHHHhhccccCCCEEEEEec
Q 020487          204 TGGKGVDVILD-----CMGAS----YFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       204 ~~~~~~d~vi~-----~~g~~----~~~~~~~~l~~~g~~v~~g~  239 (325)
                        ...||.++.     .++..    .+..+.+.|+|||++++...
T Consensus       125 --~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~i  167 (285)
T d1kpga_         125 --DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  167 (285)
T ss_dssp             --CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             --cccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEEE
Confidence              236888764     34432    35677889999999986543

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.24  E-value=0.0029  Score=44.95  Aligned_cols=90  Identities=13%  Similarity=0.168  Sum_probs=63.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  220 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~  220 (325)
                      +|+|.|+ |.+|..+++.+...|..|++++.++++.+.+.+ ++. .++..+..+.  .+.+..+-+.+|.++.+.+++.
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~-~vi~Gd~~~~--~~l~~~~i~~a~~vv~~t~~d~   77 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDA-LVINGDCTKI--KTLEDAGIEDADMYIAVTGKEE   77 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSS-EEEESCTTSH--HHHHHTTTTTCSEEEECCSCHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhh-hhccCcccch--hhhhhcChhhhhhhcccCCcHH
Confidence            6899998 999999999999999999999999998887764 554 4444443332  3344455567899999888764


Q ss_pred             HH----HhhccccCCCEEEE
Q 020487          221 FQ----RNLGSLNIDGRLFI  236 (325)
Q Consensus       221 ~~----~~~~~l~~~g~~v~  236 (325)
                      .+    ...+.+.+. +++.
T Consensus        78 ~N~~~~~~~k~~~~~-~iI~   96 (132)
T d1lssa_          78 VNLMSSLLAKSYGIN-KTIA   96 (132)
T ss_dssp             HHHHHHHHHHHTTCC-CEEE
T ss_pred             HHHHHHHHHHHcCCc-eEEE
Confidence            32    223445554 4443

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.24  E-value=0.00042  Score=55.60  Aligned_cols=74  Identities=14%  Similarity=-0.005  Sum_probs=54.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHc----CCCEEEeCCC-chHHHHHHHHhCCCcccEEEeCC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GADVCINYKT-EDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~----g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      ++||+|+++++|++++..+...|++|++..++.++.++++..    ....+.+..+ ..+.+.+.+..|  ++|+++++.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G--~iDiLVnNA   79 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYG--QVDVLVSND   79 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHS--CCCEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcC--CCCEEEECC
Confidence            689999999999999999999999999999988887766542    2223333222 334455556665  699999876


Q ss_pred             C
Q 020487          217 G  217 (325)
Q Consensus       217 g  217 (325)
                      |
T Consensus        80 g   80 (252)
T d1zmta1          80 I   80 (252)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.21  E-value=0.0013  Score=49.15  Aligned_cols=97  Identities=11%  Similarity=0.098  Sum_probs=62.7

Q ss_pred             HHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cC---CCEEEeCCCchHHHHHHHHhC
Q 020487          130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LG---ADVCINYKTEDFVARVKEETG  205 (325)
Q Consensus       130 ~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g---~~~~~~~~~~~~~~~~~~~~~  205 (325)
                      +|.+..-.-+|.+|+|+|+ |+.+.+++..+..+|++++++.|+.++.+.+.+ +.   ....+....          ..
T Consensus         8 ~l~~~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~----------~~   76 (170)
T d1nyta1           8 DLERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE----------LE   76 (170)
T ss_dssp             HHHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG----------GT
T ss_pred             HHHHcCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccccc----------cc
Confidence            4434333356899999998 999999999999999999999999988766543 22   212221111          11


Q ss_pred             CCcccEEEeCCChHHHH----HhhccccCCCEEEEE
Q 020487          206 GKGVDVILDCMGASYFQ----RNLGSLNIDGRLFII  237 (325)
Q Consensus       206 ~~~~d~vi~~~g~~~~~----~~~~~l~~~g~~v~~  237 (325)
                      ...+|++++|+......    .-.+.++++..++++
T Consensus        77 ~~~~dliIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~  112 (170)
T d1nyta1          77 GHEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDM  112 (170)
T ss_dssp             TCCCSEEEECCSCGGGTCCCCCCGGGCCTTCEEEES
T ss_pred             ccccceeecccccCcccCCCCCcHHHhccCcEEEEe
Confidence            23689999998643211    113446666666554

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.14  E-value=0.0015  Score=49.05  Aligned_cols=95  Identities=11%  Similarity=0.045  Sum_probs=63.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      +.+|+|+|+ |.+|..+++.+...|.+|+++.++.++.+.+.+-......................  ..|.++.+....
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~i~~~~~~   78 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA--KHDLVISLIPYT   78 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHT--TSSEEEECSCGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhh--ccceeEeeccch
Confidence            578999998 99999999999999999999999999988876533333332222222223333332  568888877765


Q ss_pred             HH-HHhhccccCCCEEEEE
Q 020487          220 YF-QRNLGSLNIDGRLFII  237 (325)
Q Consensus       220 ~~-~~~~~~l~~~g~~v~~  237 (325)
                      .. ..+..+...+-.++..
T Consensus        79 ~~~~~~~~~~~~~~~~~~~   97 (182)
T d1e5qa1          79 FHATVIKSAIRQKKHVVTT   97 (182)
T ss_dssp             GHHHHHHHHHHHTCEEECS
T ss_pred             hhhHHHHHHHhhccceeec
Confidence            43 3334455556666654

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.13  E-value=0.00014  Score=59.46  Aligned_cols=103  Identities=21%  Similarity=0.289  Sum_probs=70.1

Q ss_pred             HHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC-EEEeCCCchHHHHHH
Q 020487          127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVK  201 (325)
Q Consensus       127 a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~  201 (325)
                      .+..+.+..+++||++||=+|+  +.|..+..+++..|++|+.++.+++..+.+++    .|.. .+..... ++    .
T Consensus        40 k~~~~~~~l~l~~g~~VLDiGC--G~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~-d~----~  112 (280)
T d2fk8a1          40 KVDLNLDKLDLKPGMTLLDIGC--GWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GW----E  112 (280)
T ss_dssp             HHHHHHTTSCCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CG----G
T ss_pred             HHHHHHHHcCCCCCCEEEEecC--CchHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhh-hh----h
Confidence            3444568889999999999996  45667788888889999999999998877653    3322 1111111 11    1


Q ss_pred             HHhCCCcccEEEe-----CCChH----HHHHhhccccCCCEEEEEe
Q 020487          202 EETGGKGVDVILD-----CMGAS----YFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       202 ~~~~~~~~d~vi~-----~~g~~----~~~~~~~~l~~~g~~v~~g  238 (325)
                      +.  ...||.|+.     .++..    .+..+.+.|+|||++++-.
T Consensus       113 ~~--~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~~  156 (280)
T d2fk8a1         113 DF--AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS  156 (280)
T ss_dssp             GC--CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             hh--ccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEEE
Confidence            11  236888854     34432    3577789999999998754

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.13  E-value=5.8e-05  Score=60.19  Aligned_cols=97  Identities=18%  Similarity=0.231  Sum_probs=63.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCch------HHHHHHHHhCCCcccEEE
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED------FVARVKEETGGKGVDVIL  213 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~d~vi  213 (325)
                      +.+|||+|+++++|.++++.+...|++|+++++++++...     .......+...      ....+........+|+++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~li   76 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF   76 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc-----ccceeccccCchhHHHHHHHHHHHHhcCCCeeEEE
Confidence            3579999999999999999999999999999987653211     11111111111      122333334455799999


Q ss_pred             eCCCh------------HH---------------HHHhhccccCCCEEEEEeccC
Q 020487          214 DCMGA------------SY---------------FQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       214 ~~~g~------------~~---------------~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      +++|.            +.               ....+..|+++|+++.++...
T Consensus        77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~  131 (235)
T d1ooea_          77 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAA  131 (235)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             ECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHH
Confidence            99873            00               123455677889999987654

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.13  E-value=0.0027  Score=46.72  Aligned_cols=71  Identities=21%  Similarity=0.398  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHH-HHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLA-VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      .+.++||+|+ |.+|..+++.+...|+ +++++.|+.++.+ .+++++.. ..+..      ++.+...  .+|+||.|+
T Consensus        23 ~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~------~~~~~l~--~~Divi~at   92 (159)
T d1gpja2          23 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFD------ELVDHLA--RSDVVVSAT   92 (159)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGG------GHHHHHH--TCSEEEECC
T ss_pred             ccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccch------hHHHHhc--cCCEEEEec
Confidence            5789999998 9999999999999998 7999999977765 45567743 33221      2222222  699999999


Q ss_pred             ChH
Q 020487          217 GAS  219 (325)
Q Consensus       217 g~~  219 (325)
                      +.+
T Consensus        93 ss~   95 (159)
T d1gpja2          93 AAP   95 (159)
T ss_dssp             SSS
T ss_pred             CCC
Confidence            864

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.13  E-value=0.00051  Score=53.88  Aligned_cols=107  Identities=15%  Similarity=0.140  Sum_probs=71.4

Q ss_pred             CcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHc--CCC--EEEeCCCc-
Q 020487          120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL--GAD--VCINYKTE-  194 (325)
Q Consensus       120 l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~--g~~--~~~~~~~~-  194 (325)
                      +..+...|.  +.+...+++|++||-+|+  +.|..++.+++. +.+|+.++.+++..+.+++.  ...  .++..+.. 
T Consensus        53 ~~~p~~~a~--ml~~L~l~~g~~VLdIG~--GsGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~  127 (224)
T d1vbfa_          53 TTALNLGIF--MLDELDLHKGQKVLEIGT--GIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTL  127 (224)
T ss_dssp             ECCHHHHHH--HHHHTTCCTTCEEEEECC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGG
T ss_pred             eehhhhHHH--HHHHhhhcccceEEEecC--CCCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccCchhh
Confidence            344445554  336778999999999996  357777777775 67999999999887777642  111  22222211 


Q ss_pred             hHHHHHHHHhCCCcccEEEeCCChHHH-HHhhccccCCCEEEEEe
Q 020487          195 DFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       195 ~~~~~~~~~~~~~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~g  238 (325)
                      .+.       ...+||.|+-+.+.+.+ ...+++|++||++|..-
T Consensus       128 g~~-------~~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~pv  165 (224)
T d1vbfa_         128 GYE-------EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPI  165 (224)
T ss_dssp             CCG-------GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             cch-------hhhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEEE
Confidence            111       12469999877665443 56678999999999863

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.12  E-value=0.00053  Score=54.81  Aligned_cols=78  Identities=19%  Similarity=0.289  Sum_probs=51.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHH---HCCCEEEEEecChhhHHHHHH---cCCC-EEE--eCCCchHH----HHHHHHhCCC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGK---CQGVRVFVTAGSEEKLAVCKD---LGAD-VCI--NYKTEDFV----ARVKEETGGK  207 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~---~~g~~v~~~~~~~~~~~~~~~---~g~~-~~~--~~~~~~~~----~~~~~~~~~~  207 (325)
                      .+|||+|+++++|.++++.+.   ..|++|++++|++++.+.+++   .+.. .++  |-.+....    +.+.+.....
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            479999999999999987664   458999999999887665543   2222 223  33333222    2333333444


Q ss_pred             cccEEEeCCCh
Q 020487          208 GVDVILDCMGA  218 (325)
Q Consensus       208 ~~d~vi~~~g~  218 (325)
                      ++|+++++.|.
T Consensus        83 ~iDiLvnNAg~   93 (248)
T d1snya_          83 GLNVLFNNAGI   93 (248)
T ss_dssp             CCSEEEECCCC
T ss_pred             CcceEEeeccc
Confidence            79999998763

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.10  E-value=6.9e-05  Score=60.04  Aligned_cols=101  Identities=14%  Similarity=0.141  Sum_probs=67.4

Q ss_pred             HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHHH----c-CCCEEEeCCCchHHHHHHHHh
Q 020487          132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----L-GADVCINYKTEDFVARVKEET  204 (325)
Q Consensus       132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~~----~-g~~~~~~~~~~~~~~~~~~~~  204 (325)
                      ....+++||++||-.|+  +.|.++..+|+..|  .+|+.++.+++..+.+++    + +.+.+-....+     +.+..
T Consensus        78 i~~l~i~pG~rVLEiG~--GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~D-----i~~~~  150 (250)
T d1yb2a1          78 IMRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSD-----IADFI  150 (250)
T ss_dssp             ---CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSC-----TTTCC
T ss_pred             HHHcCCCCcCEEEEeee--eCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEee-----eeccc
Confidence            35678999999999997  34777777887754  589999999988777663    2 22322211111     11223


Q ss_pred             CCCcccEEEeCCChH--HHHHhhccccCCCEEEEEec
Q 020487          205 GGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       205 ~~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ....||.|+--...+  .+..+.+.|+|||+++.+..
T Consensus       151 ~~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~P  187 (250)
T d1yb2a1         151 SDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP  187 (250)
T ss_dssp             CSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             ccceeeeeeecCCchHHHHHHHHHhcCCCceEEEEeC
Confidence            345799888655543  47888999999999998743

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.08  E-value=0.00084  Score=50.74  Aligned_cols=92  Identities=14%  Similarity=0.084  Sum_probs=62.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEE-------eCCCchHHHHHHHHhCCCcccEEE
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-------NYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                      .++.|+|+ |.+|++++..+...|.+|++.++++++.+.+++.+.....       .... .......+...  .+|++|
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~--~aD~ii   77 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPD-LLTSDIGLAVK--DADVIL   77 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCS-EEESCHHHHHT--TCSEEE
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhh-hhhhhhHhHhc--CCCEEE
Confidence            68999999 9999999999999999999999999988888765422111       0010 00111233332  689999


Q ss_pred             eCCChHHH----HHhhccccCCCEEEE
Q 020487          214 DCMGASYF----QRNLGSLNIDGRLFI  236 (325)
Q Consensus       214 ~~~g~~~~----~~~~~~l~~~g~~v~  236 (325)
                      -|+.....    ..+...+.++..++.
T Consensus        78 i~v~~~~~~~~~~~i~~~l~~~~~iv~  104 (184)
T d1bg6a2          78 IVVPAIHHASIAANIASYISEGQLIIL  104 (184)
T ss_dssp             ECSCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred             EEEchhHHHHHHHHhhhccCCCCEEEE
Confidence            99987543    344556666665553

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.06  E-value=0.0019  Score=52.24  Aligned_cols=78  Identities=21%  Similarity=0.217  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCEEE--eCCCch----HHHHHHHHhCC
Q 020487          139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTED----FVARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g--~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~----~~~~~~~~~~~  206 (325)
                      +|+++||+|++|  ++|.++++.+...|++|+++.++++..+.++    +.+...+.  +.....    ....+.+..+ 
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g-   82 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG-   82 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS-
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC-
Confidence            489999999865  7999999999999999999999875443333    22322333  222222    2333444444 


Q ss_pred             CcccEEEeCCCh
Q 020487          207 KGVDVILDCMGA  218 (325)
Q Consensus       207 ~~~d~vi~~~g~  218 (325)
                       .+|+++.+.|.
T Consensus        83 -~id~lV~nag~   93 (274)
T d2pd4a1          83 -SLDFIVHSVAF   93 (274)
T ss_dssp             -CEEEEEECCCC
T ss_pred             -CCCeEEeeccc
Confidence             68999988863

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=97.00  E-value=0.0021  Score=48.90  Aligned_cols=98  Identities=15%  Similarity=0.009  Sum_probs=64.9

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcC-CC-----------------EEEeCCCc
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG-AD-----------------VCINYKTE  194 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g-~~-----------------~~~~~~~~  194 (325)
                      ....+.||.+||..|+  +.|..+..+|++ |++|++++.++...+.+++.. ..                 ..+..+..
T Consensus        14 ~~l~~~~~~rvLd~GC--G~G~~a~~la~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   90 (201)
T d1pjza_          14 SSLNVVPGARVLVPLC--GKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   90 (201)
T ss_dssp             HHHCCCTTCEEEETTT--CCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HHcCCCCCCEEEEecC--cCCHHHHHHHHc-CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccc
Confidence            4457899999999997  457888888875 999999999999998887521 11                 11111111


Q ss_pred             hHHHHHHHHhCCCcccEEEeCCCh---------HHHHHhhccccCCCEEEEEe
Q 020487          195 DFVARVKEETGGKGVDVILDCMGA---------SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       195 ~~~~~~~~~~~~~~~d~vi~~~g~---------~~~~~~~~~l~~~g~~v~~g  238 (325)
                      .......     ..+|+|++...-         ..+..+.+.|+|||++++..
T Consensus        91 ~l~~~~~-----~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          91 ALTARDI-----GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             SSTHHHH-----HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             ccccccc-----cceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence            1111111     158988875431         23567788999999987654

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=97.00  E-value=0.0013  Score=52.61  Aligned_cols=94  Identities=19%  Similarity=0.192  Sum_probs=64.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC-EEEeCCCchHHHHHHHHhCCCcccE
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      .++|++||=.|+ | .|..++.++ ..|++|++++.+++..+.+++    .+.. .++..+       +.+......||+
T Consensus       118 ~~~g~~VLDiGc-G-sG~l~i~aa-~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d-------~~~~~~~~~fD~  187 (254)
T d2nxca1         118 LRPGDKVLDLGT-G-SGVLAIAAE-KLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGS-------LEAALPFGPFDL  187 (254)
T ss_dssp             CCTTCEEEEETC-T-TSHHHHHHH-HTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESC-------HHHHGGGCCEEE
T ss_pred             cCccCEEEEccc-c-hhHHHHHHH-hcCCEEEEEECChHHHHHHHHHHHHcCCceeEEecc-------ccccccccccch
Confidence            578999999997 3 366666554 468999999999998776653    3432 333221       112233457999


Q ss_pred             EEeCCChHH----HHHhhccccCCCEEEEEecc
Q 020487          212 ILDCMGASY----FQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       212 vi~~~g~~~----~~~~~~~l~~~g~~v~~g~~  240 (325)
                      |+.+.....    +..+.+.|+|||++++.|..
T Consensus       188 V~ani~~~~l~~l~~~~~~~LkpGG~lilSgil  220 (254)
T d2nxca1         188 LVANLYAELHAALAPRYREALVPGGRALLTGIL  220 (254)
T ss_dssp             EEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             hhhccccccHHHHHHHHHHhcCCCcEEEEEecc
Confidence            998765433    45667889999999987653

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.95  E-value=0.002  Score=51.63  Aligned_cols=84  Identities=17%  Similarity=0.284  Sum_probs=55.3

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhh-------HHHHHHcCCCEE-E--eCCCchHHHHHHHH
Q 020487          135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-------LAVCKDLGADVC-I--NYKTEDFVARVKEE  203 (325)
Q Consensus       135 ~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~-------~~~~~~~g~~~~-~--~~~~~~~~~~~~~~  203 (325)
                      ..++|+.++||+|+++++|.+++..+...|+ +|+++.|+..+       .++++..|.... +  |-.+......+.+.
T Consensus         4 ~~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~   83 (259)
T d2fr1a1           4 DEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGG   83 (259)
T ss_dssp             CCCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             cccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcc
Confidence            3578999999999999999999999988899 58878776432       123344565322 2  33333333343333


Q ss_pred             h-CCCcccEEEeCCCh
Q 020487          204 T-GGKGVDVILDCMGA  218 (325)
Q Consensus       204 ~-~~~~~d~vi~~~g~  218 (325)
                      . ...++|.++.+.|.
T Consensus        84 i~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAAT   99 (259)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             cccccccccccccccc
Confidence            2 22358999998874

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.90  E-value=0.0025  Score=50.65  Aligned_cols=98  Identities=20%  Similarity=0.259  Sum_probs=63.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cChhhHHHH----HHcCCCE-EE--eCCCchH----HHHHHHHhCCCcc
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADV-CI--NYKTEDF----VARVKEETGGKGV  209 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~-~~~~~~~~~----~~~g~~~-~~--~~~~~~~----~~~~~~~~~~~~~  209 (325)
                      .+||+|+++++|.++++.+...|++|++.+ ++++..+.+    ++.|.+. .+  |-.+...    .+.+.+..|  ++
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~i   80 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG--TI   80 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS--CC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC--CC
Confidence            689999999999999999999999999875 455554433    3455432 22  3333222    233334444  69


Q ss_pred             cEEEeCCChH-----------H---------------HHHhhccc--cCCCEEEEEeccC
Q 020487          210 DVILDCMGAS-----------Y---------------FQRNLGSL--NIDGRLFIIGTQG  241 (325)
Q Consensus       210 d~vi~~~g~~-----------~---------------~~~~~~~l--~~~g~~v~~g~~~  241 (325)
                      |+++++.|..           .               .+.++..|  +.+|++|.+++..
T Consensus        81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~  140 (244)
T d1edoa_          81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVV  140 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTH
T ss_pred             CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChh
Confidence            9999998741           0               12344555  4579999987644

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.88  E-value=0.0012  Score=51.74  Aligned_cols=108  Identities=18%  Similarity=0.211  Sum_probs=64.5

Q ss_pred             CcchHHHHHHHHHhh--cCCCCCCEEEEEcCCchHHHHHHHHHH---HCC----CEEEEEecChhhHHHHHH--------
Q 020487          120 FPEVACTVWSTVFMT--SHLSPGESFLVHGGSSGIGTFAIQMGK---CQG----VRVFVTAGSEEKLAVCKD--------  182 (325)
Q Consensus       120 l~~~~~~a~~~l~~~--~~~~~~~~vli~g~~g~~G~~~~~~a~---~~g----~~v~~~~~~~~~~~~~~~--------  182 (325)
                      +..+...|.. + +.  ..++++++||.+|+  +.|+.++.+++   ..|    .+|+.++..++-.+.+++        
T Consensus        61 is~P~~~a~~-l-~~L~~~l~~g~~VLeIGt--GsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~  136 (223)
T d1r18a_          61 ISAPHMHAFA-L-EYLRDHLKPGARILDVGS--GSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRS  136 (223)
T ss_dssp             ECCHHHHHHH-H-HHTTTTCCTTCEEEEESC--TTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred             eehhhhHHHH-H-HHHhhccCCCCeEEEecC--CCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchh
Confidence            3344555542 3 33  37899999999997  33555555544   444    489999988875544432        


Q ss_pred             -cCCCEE--EeCCCchHHHHHHHHhCCCcccEEEeCCChHHH-HHhhccccCCCEEEEE
Q 020487          183 -LGADVC--INYKTEDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFII  237 (325)
Q Consensus       183 -~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~  237 (325)
                       .+.+.+  ...+...      .......||.|+-+.+.+.+ ...+++|++||++|..
T Consensus       137 ~~~~~nv~~~~~d~~~------~~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         137 MLDSGQLLIVEGDGRK------GYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             HHHHTSEEEEESCGGG------CCGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             hcCccEEEEEeccccc------ccccccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence             122222  2222111      01122479998887775543 5668899999999874

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.86  E-value=0.0022  Score=50.80  Aligned_cols=75  Identities=17%  Similarity=0.265  Sum_probs=52.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCE-------EEEEecChhhHHHHH----HcCCCE-EE--eCCCch----HHHHHHHH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVR-------VFVTAGSEEKLAVCK----DLGADV-CI--NYKTED----FVARVKEE  203 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~-------v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~----~~~~~~~~  203 (325)
                      .+||+|+++++|.+++..+...|++       |+...+++++.+.+.    +.|... .+  |-.+..    +.+.+.+.
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4799999999999999998888987       888999988776543    344322 22  333322    23334444


Q ss_pred             hCCCcccEEEeCCCh
Q 020487          204 TGGKGVDVILDCMGA  218 (325)
Q Consensus       204 ~~~~~~d~vi~~~g~  218 (325)
                      .|  .+|+++++.|.
T Consensus        83 ~g--~iDilvnnAg~   95 (240)
T d2bd0a1          83 YG--HIDCLVNNAGV   95 (240)
T ss_dssp             TS--CCSEEEECCCC
T ss_pred             cC--Ccceeeccccc
Confidence            44  69999999874

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.0072  Score=44.18  Aligned_cols=109  Identities=17%  Similarity=0.176  Sum_probs=74.3

Q ss_pred             HHHHhhcC-CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCC
Q 020487          129 STVFMTSH-LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       129 ~~l~~~~~-~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      .++.+... .-.|++++|.|- |-+|..+++.++.+|++|++++..+-+.-++.--|+ .+..         +.+...  
T Consensus        12 ~~~~r~t~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~-~v~~---------~~~a~~--   78 (163)
T d1li4a1          12 DGIKRATDVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPINALQAAMEGY-EVTT---------MDEACQ--   78 (163)
T ss_dssp             HHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC-EECC---------HHHHTT--
T ss_pred             HHHHHHhCceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccchhHHhhcCce-Eeee---------hhhhhh--
Confidence            34444333 347999999996 999999999999999999999988765444433343 2221         122222  


Q ss_pred             cccEEEeCCChHH--HHHhhccccCCCEEEEEeccCCcccccchHHHH
Q 020487          208 GVDVILDCMGASY--FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLF  253 (325)
Q Consensus       208 ~~d~vi~~~g~~~--~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~  253 (325)
                      ..|+++.|.|...  -.+.++.|+++.-+..+|...   ..++...+.
T Consensus        79 ~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd---~EId~~~L~  123 (163)
T d1li4a1          79 EGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFD---VEIDVKWLN  123 (163)
T ss_dssp             TCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSSST---TSBCHHHHH
T ss_pred             hccEEEecCCCccchhHHHHHhccCCeEEEEecccc---ceecHHHHh
Confidence            5799999999754  366788999988888776433   245544443

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.79  E-value=0.007  Score=44.01  Aligned_cols=82  Identities=17%  Similarity=0.250  Sum_probs=59.4

Q ss_pred             EEEEEcCCchHHHHHHHH-HHHCCCEEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH
Q 020487          142 SFLVHGGSSGIGTFAIQM-GKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~-a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      +|.++|+ |.+|.+.++- ++.-+.+|++.++++++.+.+.+ ++.. ..+.....           ...|+||=|+...
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~-~~~~~~~v-----------~~~Div~lavkP~   68 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVE-TSATLPEL-----------HSDDVLILAVKPQ   68 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCE-EESSCCCC-----------CTTSEEEECSCHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccc-cccccccc-----------cccceEEEecCHH
Confidence            5889998 9999988774 44434799999999998887764 5543 33322221           2579999999887


Q ss_pred             HHHHhhccccCCCEEEE
Q 020487          220 YFQRNLGSLNIDGRLFI  236 (325)
Q Consensus       220 ~~~~~~~~l~~~g~~v~  236 (325)
                      .+...++.+++.+.++.
T Consensus        69 ~~~~v~~~l~~~~~~vi   85 (152)
T d1yqga2          69 DMEAACKNIRTNGALVL   85 (152)
T ss_dssp             HHHHHHTTCCCTTCEEE
T ss_pred             HHHHhHHHHhhcccEEe
Confidence            78888888877665553

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.71  E-value=0.0036  Score=44.51  Aligned_cols=92  Identities=15%  Similarity=0.135  Sum_probs=62.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH-
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-  220 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-  220 (325)
                      +++|.|. |.+|..+++.+...|..|++++.++++.+.+++.+...++ .+... . ...+..+-..+|.++-++++.. 
T Consensus         2 ~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~-gd~~~-~-~~l~~a~i~~a~~vi~~~~~~~~   77 (134)
T d2hmva1           2 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVI-ANATE-E-NELLSLGIRNFEYVIVAIGANIQ   77 (134)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEE-CCTTC-T-THHHHHTGGGCSEEEECCCSCHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCccee-eeccc-c-hhhhccCCccccEEEEEcCchHH
Confidence            4788898 9999999999999999999999999999988887764443 22222 1 1223334446888888877532 


Q ss_pred             ---HHHhhccccCCCEEEEE
Q 020487          221 ---FQRNLGSLNIDGRLFII  237 (325)
Q Consensus       221 ---~~~~~~~l~~~g~~v~~  237 (325)
                         +......+.+..+++..
T Consensus        78 ~~~~~~~~~~~~~~~~iiar   97 (134)
T d2hmva1          78 ASTLTTLLLKELDIPNIWVK   97 (134)
T ss_dssp             HHHHHHHHHHHTTCSEEEEE
T ss_pred             hHHHHHHHHHHcCCCcEEee
Confidence               22233344555666654

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.70  E-value=0.0069  Score=44.93  Aligned_cols=90  Identities=16%  Similarity=0.099  Sum_probs=66.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHHHcCC-CEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGA-DVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      +|+|+|. |.+|.+.+..++..|.  +|++.+++++..+.+++.+. +..........         ....|+++-|+..
T Consensus         3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~---------~~~~dlIila~p~   72 (171)
T d2g5ca2           3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVE---------DFSPDFVMLSSPV   72 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGG---------GTCCSEEEECSCH
T ss_pred             EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhh---------ccccccccccCCc
Confidence            6899998 9999999999998885  89999999999999998875 34432222111         1257999999997


Q ss_pred             HHH----HHhhccccCCCEEEEEeccC
Q 020487          219 SYF----QRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       219 ~~~----~~~~~~l~~~g~~v~~g~~~  241 (325)
                      ...    ..+.+.++++..+++++...
T Consensus        73 ~~~~~vl~~l~~~~~~~~ii~d~~s~k   99 (171)
T d2g5ca2          73 RTFREIAKKLSYILSEDATVTDQGSVK   99 (171)
T ss_dssp             HHHHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred             hhhhhhhhhhhcccccccccccccccc
Confidence            543    44455677777777776543

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=96.66  E-value=0.0059  Score=48.78  Aligned_cols=74  Identities=19%  Similarity=0.214  Sum_probs=49.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH-HH----HHH-cCCCEEEe---C-CCc-------hHHHHHHHHh
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AV----CKD-LGADVCIN---Y-KTE-------DFVARVKEET  204 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~-~~----~~~-~g~~~~~~---~-~~~-------~~~~~~~~~~  204 (325)
                      +.||+|+++++|.+.+..+...|++|+++.++.++. +.    ..+ .+......   . ...       .+.+.+.+..
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999886543 22    222 33333221   1 111       1122333445


Q ss_pred             CCCcccEEEeCCC
Q 020487          205 GGKGVDVILDCMG  217 (325)
Q Consensus       205 ~~~~~d~vi~~~g  217 (325)
                      |  .+|++++++|
T Consensus        83 g--~iDilvnnAG   93 (266)
T d1mxha_          83 G--RCDVLVNNAS   93 (266)
T ss_dssp             S--CCCEEEECCC
T ss_pred             C--CCCEEEECCc
Confidence            4  6999999988

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.63  E-value=0.0017  Score=51.66  Aligned_cols=48  Identities=23%  Similarity=0.281  Sum_probs=41.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH-HHcCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGAD  186 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~  186 (325)
                      +|.+++|+|+++++|.++++.+...|++|+++.+++++.+.. ++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            488999999999999999999999999999999998877654 456544

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.0025  Score=49.91  Aligned_cols=108  Identities=16%  Similarity=0.124  Sum_probs=69.1

Q ss_pred             CcchHHHHHHHHHhh--cCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHHH----cC-----CC
Q 020487          120 FPEVACTVWSTVFMT--SHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LG-----AD  186 (325)
Q Consensus       120 l~~~~~~a~~~l~~~--~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~~----~g-----~~  186 (325)
                      +..+...|.. + +.  ..++||++||-.|+  +.|..++.+++..|  .+|+.++.+++-.+.+++    .+     ..
T Consensus        57 is~P~~~a~~-l-e~L~~~l~~g~~VLdiG~--GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~  132 (224)
T d1i1na_          57 ISAPHMHAYA-L-ELLFDQLHEGAKALDVGS--GSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSG  132 (224)
T ss_dssp             ECCHHHHHHH-H-HHTTTTSCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTS
T ss_pred             hhhhHHHHHH-H-HHHhhccCCCCeEEEecC--CCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCccccccc
Confidence            3334444543 3 33  37899999999996  45888888888765  589999999886665532    12     11


Q ss_pred             --EEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHH-HHhhccccCCCEEEEE
Q 020487          187 --VCINYKTEDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFII  237 (325)
Q Consensus       187 --~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~  237 (325)
                        .+...+...      -......||.|+.+...... ..+++.|+|||++|..
T Consensus       133 ~~~~~~gD~~~------~~~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         133 RVQLVVGDGRM------GYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             SEEEEESCGGG------CCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ceEEEEeeccc------ccchhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence              122111110      01112479999987765443 6678999999999875

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.52  E-value=0.0048  Score=48.44  Aligned_cols=99  Identities=17%  Similarity=0.220  Sum_probs=67.7

Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC--EEEeCCCchHHHHHHHHh
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD--VCINYKTEDFVARVKEET  204 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~--~~~~~~~~~~~~~~~~~~  204 (325)
                      +.+.+.++||++||=+|+  +.|..+..+++. +.+|+.++.++...+.++    +.+.+  .++..+...+.      .
T Consensus         8 l~~~~~~~~~~rILDiGc--GtG~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~------~   78 (234)
T d1xxla_           8 MIKTAECRAEHRVLDIGA--GAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP------F   78 (234)
T ss_dssp             HHHHHTCCTTCEEEEESC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC------S
T ss_pred             HHHHhCCCCCCEEEEeCC--cCcHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhccccccccccccccccccc------c
Confidence            457789999999999997  457777777775 689999999988766554    23332  22222222110      1


Q ss_pred             CCCcccEEEeCCCh-------HHHHHhhccccCCCEEEEEe
Q 020487          205 GGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       205 ~~~~~d~vi~~~g~-------~~~~~~~~~l~~~g~~v~~g  238 (325)
                      ..+.||+|+.+-.-       ..+..+.+.|+|||+++..-
T Consensus        79 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          79 PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            23479999865432       23678889999999998764

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.51  E-value=0.01  Score=47.15  Aligned_cols=79  Identities=19%  Similarity=0.209  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCEEEeCCCch--H-HHHHHHH-hCCCc
Q 020487          139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCINYKTED--F-VARVKEE-TGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g--~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~--~-~~~~~~~-~~~~~  208 (325)
                      .|+++||+|+++  ++|.+++..+...|++|++..++++..+.++    ..+.......+..+  . .....+. .....
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   83 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccc
Confidence            589999999987  7889999999999999999999877555443    34444333322222  1 1222222 22236


Q ss_pred             ccEEEeCCC
Q 020487          209 VDVILDCMG  217 (325)
Q Consensus       209 ~d~vi~~~g  217 (325)
                      .|+.+++.+
T Consensus        84 ~d~~v~~a~   92 (258)
T d1qsga_          84 FDGFVHSIG   92 (258)
T ss_dssp             EEEEEECCC
T ss_pred             cceEEEeec
Confidence            789998764

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.50  E-value=0.0036  Score=49.32  Aligned_cols=92  Identities=24%  Similarity=0.330  Sum_probs=67.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      +.++.+||=+|+  +.|..+..+++ .|++|++++.+++..+.+++.+....+..+.....      ...+.||+|+...
T Consensus        40 ~~~~~~vLDiGc--G~G~~~~~l~~-~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~l~------~~~~~fD~ii~~~  110 (246)
T d2avna1          40 LKNPCRVLDLGG--GTGKWSLFLQE-RGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLP------FPSGAFEAVLALG  110 (246)
T ss_dssp             CCSCCEEEEETC--TTCHHHHHHHT-TTCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCC------SCTTCEEEEEECS
T ss_pred             cCCCCEEEEECC--CCchhcccccc-cceEEEEeecccccccccccccccccccccccccc------cccccccceeeec
Confidence            457789999997  36888888876 49999999999999999998776655554443321      2234799998765


Q ss_pred             Ch--------HHHHHhhccccCCCEEEEE
Q 020487          217 GA--------SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       217 g~--------~~~~~~~~~l~~~g~~v~~  237 (325)
                      ..        ..+..+.+.|+|||.++..
T Consensus       111 ~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         111 DVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             SHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             chhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            43        2256778899999988865

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.49  E-value=0.01  Score=44.11  Aligned_cols=89  Identities=9%  Similarity=0.095  Sum_probs=56.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcC---CCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG---ADVCINYKTEDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g---~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (325)
                      -++.+|+|+|+ |+.+.+++..+...+.+++++.|+.++.+.+. .+.   .......+..          ....+|++|
T Consensus        16 ~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~----------~~~~~diiI   84 (171)
T d1p77a1          16 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI----------PLQTYDLVI   84 (171)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC----------CCSCCSEEE
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc----------cccccceee
Confidence            46889999998 88899998888877789999999998876554 232   2122221111          123689999


Q ss_pred             eCCChHHHH----HhhccccCCCEEEEE
Q 020487          214 DCMGASYFQ----RNLGSLNIDGRLFII  237 (325)
Q Consensus       214 ~~~g~~~~~----~~~~~l~~~g~~v~~  237 (325)
                      +|++...-.    ...+.++++..++++
T Consensus        85 N~tp~g~~~~~~~~~~~~~~~~~~~~D~  112 (171)
T d1p77a1          85 NATSAGLSGGTASVDAEILKLGSAFYDM  112 (171)
T ss_dssp             ECCCC-------CCCHHHHHHCSCEEES
T ss_pred             ecccccccccccchhhhhhcccceeeee
Confidence            998753211    112334556666654

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.40  E-value=0.0046  Score=48.27  Aligned_cols=99  Identities=16%  Similarity=0.197  Sum_probs=67.4

Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE--EEeCCCchHHHHHHHHh
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV--CINYKTEDFVARVKEET  204 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~~  204 (325)
                      +.+.++++++++||=+|+ | .|..+..+++. |++|++++.++...+.++    ..+...  ++..+...+.      .
T Consensus         7 ll~~~~l~~~~rVLDiGc-G-~G~~~~~l~~~-~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~------~   77 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVAT-G-GGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP------F   77 (231)
T ss_dssp             HHHHHTCCSCCEEEEETC-T-TCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC------S
T ss_pred             HHHhcCCCCcCEEEEecc-c-CcHHHHHHHHh-CCEEEEEECCHHHHhhhhhccccccccccccccccccccc------c
Confidence            347788999999999997 3 67777777655 789999999988766654    344432  2322222210      1


Q ss_pred             CCCcccEEEeCCCh-------HHHHHhhccccCCCEEEEEe
Q 020487          205 GGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       205 ~~~~~d~vi~~~g~-------~~~~~~~~~l~~~g~~v~~g  238 (325)
                      ....||+|+..-.-       ..+..+.+.|+|||+++...
T Consensus        78 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          78 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            23469999865432       23678889999999999864

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.38  E-value=0.0045  Score=45.16  Aligned_cols=85  Identities=13%  Similarity=0.171  Sum_probs=64.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH-HHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  220 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~  220 (325)
                      +|.++|+ |.+|.+.+.-+...|.++++..++.++.+.+ +++|.....     +.. ++.+     ..|+||-|+....
T Consensus         2 kIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~-----~~~-~~~~-----~~dvIilavkp~~   69 (152)
T d2ahra2           2 KIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAM-----SHQ-DLID-----QVDLVILGIKPQL   69 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCS-----SHH-HHHH-----TCSEEEECSCGGG
T ss_pred             EEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeec-----hhh-hhhh-----ccceeeeecchHh
Confidence            5889998 9999999887777899999999998887765 466754321     111 2211     5899999998877


Q ss_pred             HHHhhccccCCCEEEEEe
Q 020487          221 FQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       221 ~~~~~~~l~~~g~~v~~g  238 (325)
                      +...++.++++..++++.
T Consensus        70 ~~~vl~~l~~~~~iis~~   87 (152)
T d2ahra2          70 FETVLKPLHFKQPIISMA   87 (152)
T ss_dssp             HHHHHTTSCCCSCEEECC
T ss_pred             HHHHhhhcccceeEeccc
Confidence            888888898888877663

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.37  E-value=0.0043  Score=48.43  Aligned_cols=73  Identities=18%  Similarity=0.106  Sum_probs=48.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .+|||+|++|.+|..++..+...|.  .|+...+++++...... +.. ++..+..+ ...+.+...  ++|.++.+.+.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~-~~~~d~~~-~~~~~~~~~--~~d~vi~~a~~   78 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EAD-VFIGDITD-ADSINPAFQ--GIDALVILTSA   78 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTT-EEECCTTS-HHHHHHHHT--TCSEEEECCCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcE-EEEeeecc-ccccccccc--cceeeEEEEee
Confidence            5899999999999999999988885  56677777766554322 222 23222222 234444443  68999988753

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.33  E-value=0.019  Score=48.66  Aligned_cols=103  Identities=19%  Similarity=0.195  Sum_probs=66.7

Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHH-----------cC----CCEEEeCCCc
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-----------LG----ADVCINYKTE  194 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~-----------~g----~~~~~~~~~~  194 (325)
                      +.+..++++|++++=+|+  +.|..+.++|+..|+ +|+.++.++...+.++.           .+    ..........
T Consensus       208 Il~~l~Lkpgd~fLDLGC--G~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f  285 (406)
T d1u2za_         208 VYQQCQLKKGDTFMDLGS--GVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF  285 (406)
T ss_dssp             HHHHTTCCTTCEEEEESC--TTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS
T ss_pred             HHHHhCCCCCCEEEeCCC--CCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeech
Confidence            347788999999998885  689999999999987 89999999886665542           11    1111111111


Q ss_pred             hHHHHHHHHhCCCcccEEEeCC---Ch---HHHHHhhccccCCCEEEEE
Q 020487          195 DFVARVKEETGGKGVDVILDCM---GA---SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       195 ~~~~~~~~~~~~~~~d~vi~~~---g~---~~~~~~~~~l~~~g~~v~~  237 (325)
                      ...........  .+|+++-..   ..   ..+..+.+.|+|||++|+.
T Consensus       286 ~~~~~~d~~~~--~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~  332 (406)
T d1u2za_         286 VDNNRVAELIP--QCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISL  332 (406)
T ss_dssp             TTCHHHHHHGG--GCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred             hhccccccccc--cceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEe
Confidence            11112222222  467777432   22   2367788999999999975

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=96.31  E-value=0.0039  Score=52.01  Aligned_cols=47  Identities=28%  Similarity=0.268  Sum_probs=40.3

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH
Q 020487          135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  181 (325)
Q Consensus       135 ~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~  181 (325)
                      .-+.+|.+|||+|++|-+|..++..+...|++|++++|+.++...++
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ   52 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHH
Confidence            34578999999999999999999988888999999999887766543

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.30  E-value=0.00054  Score=55.91  Aligned_cols=101  Identities=18%  Similarity=0.065  Sum_probs=69.2

Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHH
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEE  203 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~  203 (325)
                      |.....+.++.+||=+|+  +.|..+..+++..|++|++++.++...+.+++    .|..   .+...+...+.      
T Consensus        59 l~~~~~l~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~------  130 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP------  130 (282)
T ss_dssp             HHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS------
T ss_pred             HHHhcCCCCCCEEEEeCC--CCcHHHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccccc------
Confidence            345668899999999997  35777888888889999999999887766553    3322   23333322210      


Q ss_pred             hCCCcccEEEeCCCh-------HHHHHhhccccCCCEEEEEec
Q 020487          204 TGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       204 ~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      .....||+|+..-.-       ..+..+.+.|+|||+++....
T Consensus       131 ~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~  173 (282)
T d2o57a1         131 CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  173 (282)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEe
Confidence            123469999764321       236788899999999987654

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.30  E-value=0.0014  Score=49.73  Aligned_cols=97  Identities=12%  Similarity=0.152  Sum_probs=64.8

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCC-CE--EEeCCCchHHHHHHHHhC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA-DV--CINYKTEDFVARVKEETG  205 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~-~~--~~~~~~~~~~~~~~~~~~  205 (325)
                      ....+++|++||=+|+  +.|..++.+|+. +.+|++++.+++..+.++    ..|. +.  ++..+.   . +  ....
T Consensus        27 ~~l~~~~g~~VLDiGc--GsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda---~-~--~~~~   97 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVGC--GTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDA---P-E--ALCK   97 (186)
T ss_dssp             HHHCCCTTCEEEEESC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCH---H-H--HHTT
T ss_pred             HhcCCCCCCEEEEEEC--CeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECch---h-h--cccc
Confidence            4557899999999997  345666666665 669999999988776665    3453 22  332221   1 1  1233


Q ss_pred             CCcccEEEeCCCh----HHHHHhhccccCCCEEEEEe
Q 020487          206 GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       206 ~~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~g  238 (325)
                      ...+|.++...+.    ..+..+.+.|+|+|+++...
T Consensus        98 ~~~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~  134 (186)
T d1l3ia_          98 IPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (186)
T ss_dssp             SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCCcCEEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence            4579999866543    23567788999999998764

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.30  E-value=0.032  Score=41.72  Aligned_cols=94  Identities=11%  Similarity=0.120  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH----Hc----CC-CEEEeCCCchHHHHHHHHhCCCc
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK----DL----GA-DVCINYKTEDFVARVKEETGGKG  208 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~----~~----g~-~~~~~~~~~~~~~~~~~~~~~~~  208 (325)
                      .+.+|+|+|+ |+.+.+++..+...|+ +++++.|+.++.+.+.    ++    .. ....+....   ..+.+..  ..
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~   90 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQ---QAFAEAL--AS   90 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH---HHHHHHH--HT
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccc---cchhhhh--cc
Confidence            5789999998 8999999999999998 8889998877554332    22    11 122233221   1222222  25


Q ss_pred             ccEEEeCCChHHH-------HHhhccccCCCEEEEEe
Q 020487          209 VDVILDCMGASYF-------QRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       209 ~d~vi~~~g~~~~-------~~~~~~l~~~g~~v~~g  238 (325)
                      +|++|+|++....       ..-...++++..++++-
T Consensus        91 ~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~  127 (182)
T d1vi2a1          91 ADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECV  127 (182)
T ss_dssp             CSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECC
T ss_pred             cceeccccCCccccccchhhhhHHHhhhcchhhHHhh
Confidence            8999999864211       11134567788888773

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.27  E-value=0.0054  Score=49.02  Aligned_cols=101  Identities=17%  Similarity=0.162  Sum_probs=69.6

Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHHH----c---CCCEE-EeCCCchHHHHH
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----L---GADVC-INYKTEDFVARV  200 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~~----~---g~~~~-~~~~~~~~~~~~  200 (325)
                      +.....++||++||=.|+  +.|.++..+|+..|  .+|+.++.+++..+.+++    +   ..+.+ +...+...    
T Consensus        88 Ii~~l~i~PG~~VLE~G~--GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~~----  161 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAGA--GSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD----  161 (264)
T ss_dssp             HHHHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG----
T ss_pred             HHHHhCCCCCCEEEecCc--CCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEeccccc----
Confidence            346778999999999986  45888888998875  489999999988777653    1   12222 22111110    


Q ss_pred             HHHhCCCcccEEEeCCCh--HHHHHhhccccCCCEEEEEe
Q 020487          201 KEETGGKGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       201 ~~~~~~~~~d~vi~~~g~--~~~~~~~~~l~~~g~~v~~g  238 (325)
                       .......||.||--...  ..+..+.+.|+|||+++.+-
T Consensus       162 -~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         162 -SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             -CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             -ccccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence             01224479987765655  34788899999999999874

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=96.27  E-value=0.007  Score=49.93  Aligned_cols=75  Identities=17%  Similarity=0.185  Sum_probs=47.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecC--hhh---HHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS--EEK---LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~--~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      +|||+|++|-+|..++..+...|++|+++++-  ...   ...+...+.-.++..+-.+ ...+.+...+..+|.|+.++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~-~~~l~~~~~~~~~d~Vih~a   80 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN-KNDVTRLITKYMPDSCFHLA   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHCCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCC-HHHHHHHHHhcCCceEEeec
Confidence            69999999999999999998889999998631  122   2233333333344333222 22333333223579999987


Q ss_pred             C
Q 020487          217 G  217 (325)
Q Consensus       217 g  217 (325)
                      +
T Consensus        81 a   81 (338)
T d1orra_          81 G   81 (338)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.26  E-value=0.011  Score=41.81  Aligned_cols=76  Identities=17%  Similarity=0.246  Sum_probs=50.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  220 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~  220 (325)
                      +|.|.|++|.+|..+++..... +.++.......+......                        ..++|++||.+..+.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~------------------------~~~~DvvIDFS~p~~   56 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLT------------------------DGNTEVVIDFTHPDV   56 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHH------------------------TTTCSEEEECCCTTT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhc------------------------cccCCEEEEcccHHH
Confidence            5899999999999988877655 678877664322221111                        125788888887776


Q ss_pred             HHHhhccccCCCEEEEEeccC
Q 020487          221 FQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       221 ~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      +...++.....|.=+.+|.++
T Consensus        57 ~~~~~~~~~~~~~~~ViGTTG   77 (135)
T d1yl7a1          57 VMGNLEFLIDNGIHAVVGTTG   77 (135)
T ss_dssp             HHHHHHHHHHTTCEEEECCCC
T ss_pred             HHHHHHHHHhcCCCEEEeccc
Confidence            666666555556555666555

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.21  E-value=0.012  Score=46.90  Aligned_cols=43  Identities=26%  Similarity=0.234  Sum_probs=35.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH---CCCEEEEEecChhhHHHHH
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKC---QGVRVFVTAGSEEKLAVCK  181 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~---~g~~v~~~~~~~~~~~~~~  181 (325)
                      .|+.++|+|+++++|.++++.+..   .|++|+++.+++++.+.+.
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~   50 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK   50 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHH
Confidence            367889999999999988876543   5999999999998876653

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.20  E-value=0.0089  Score=41.01  Aligned_cols=89  Identities=12%  Similarity=0.045  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH-HHHHHcCCCEEEeCC--CchHHHHHHHHhCCCcccEEEeC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVCINYK--TEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .|.+|||.|+ |.+|..-++.+...|++|+++....... ....+.+.-......  ..++          .++++++.+
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~dl----------~~~~lv~~a   79 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLL----------DSCWLAIAA   79 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGG----------TTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHHHh----------CCCcEEeec
Confidence            3789999998 9999999999999999999987544322 112122222233211  1111          268999999


Q ss_pred             CChHHH-HHhhccccCCCEEEEEe
Q 020487          216 MGASYF-QRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       216 ~g~~~~-~~~~~~l~~~g~~v~~g  238 (325)
                      .+...+ .......++.|.+|-+.
T Consensus        80 t~d~~~n~~i~~~a~~~~ilVNv~  103 (113)
T d1pjqa1          80 TDDDTVNQRVSDAAESRRIFCNVV  103 (113)
T ss_dssp             CSCHHHHHHHHHHHHHTTCEEEET
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEeC
Confidence            988776 45567778888888764

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.16  E-value=0.011  Score=43.38  Aligned_cols=86  Identities=16%  Similarity=0.118  Sum_probs=62.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH-H
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-Y  220 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~  220 (325)
                      +|.++|. |.+|...+.-+...|++|++.++++++.+.+.+.++.. ..    + ..++.+     ..|++|-|+.++ .
T Consensus         2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~-~~----~-~~e~~~-----~~d~ii~~v~~~~~   69 (161)
T d1vpda2           2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET-AS----T-AKAIAE-----QCDVIITMLPNSPH   69 (161)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CS----S-HHHHHH-----HCSEEEECCSSHHH
T ss_pred             EEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhh-cc----c-HHHHHh-----CCCeEEEEcCCHHH
Confidence            5889998 99999999988889999999999999999988877632 21    1 112221     479999999753 3


Q ss_pred             HHH-------hhccccCCCEEEEEec
Q 020487          221 FQR-------NLGSLNIDGRLFIIGT  239 (325)
Q Consensus       221 ~~~-------~~~~l~~~g~~v~~g~  239 (325)
                      ...       +...++++..++.++.
T Consensus        70 v~~v~~~~~~~~~~~~~g~iiid~sT   95 (161)
T d1vpda2          70 VKEVALGENGIIEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             HHHHHhCCcchhhccCCCCEEEECCC
Confidence            333       2345567777777654

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.12  E-value=0.013  Score=42.62  Aligned_cols=90  Identities=19%  Similarity=0.178  Sum_probs=66.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      .=.|.+++|.|= |-+|.-+++-++.+|++|+++...+-+.-++.--|+ .+.         .+.+...  ..|+++.+.
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf-~v~---------~~~~a~~--~aDi~vTaT   86 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGF-NVV---------TLDEIVD--KGDFFITCT   86 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTC-EEC---------CHHHHTT--TCSEEEECC
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCC-ccC---------chhHccc--cCcEEEEcC
Confidence            357899999995 999999999999999999999988755433332333 232         1233332  579999999


Q ss_pred             ChHH--HHHhhccccCCCEEEEEec
Q 020487          217 GASY--FQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       217 g~~~--~~~~~~~l~~~g~~v~~g~  239 (325)
                      |...  ....++.|+++.-+..+|-
T Consensus        87 Gn~~vI~~~h~~~MKdgaIl~N~GH  111 (163)
T d1v8ba1          87 GNVDVIKLEHLLKMKNNAVVGNIGH  111 (163)
T ss_dssp             SSSSSBCHHHHTTCCTTCEEEECSS
T ss_pred             CCCccccHHHHHHhhCCeEEEeccc
Confidence            9864  3666899999988887764

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=96.06  E-value=0.049  Score=39.12  Aligned_cols=53  Identities=13%  Similarity=0.171  Sum_probs=40.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhh---HHHHHHcCCCEEEeCCC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEK---LAVCKDLGADVCINYKT  193 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~---~~~~~~~g~~~~~~~~~  193 (325)
                      .+|.|+|+||.+|..+..+.+..  .++|++++....-   .++++++....+.-.+.
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~   60 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADP   60 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCG
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccH
Confidence            68999999999999999999887  5788888755442   24566788877765444

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=96.04  E-value=0.013  Score=47.13  Aligned_cols=34  Identities=18%  Similarity=0.177  Sum_probs=29.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      .++|+|+++++|.++++.+...|++|++..++.+
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~   37 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA   37 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCH
Confidence            4689999999999999999999999998876543

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.00  E-value=0.0026  Score=42.16  Aligned_cols=36  Identities=17%  Similarity=0.151  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      .|.+|+|+|. |..|.++++++...|++|++.+....
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            3678999999 99999999999999999999997554

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=96.00  E-value=0.017  Score=46.05  Aligned_cols=80  Identities=25%  Similarity=0.379  Sum_probs=52.9

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecChhhH-HHHH-HcCCCE-EE--eCCCc----hHHHHHHHHhC-
Q 020487          138 SPGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCK-DLGADV-CI--NYKTE----DFVARVKEETG-  205 (325)
Q Consensus       138 ~~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~~~~-~~~~-~~g~~~-~~--~~~~~----~~~~~~~~~~~-  205 (325)
                      =.|.++||+|++  .++|.++++.+...|++|+++.++.++. +.+. .++... .+  |-...    ...+.+.+..+ 
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~   83 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   83 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence            358899999964  4699999999999999999999887765 3333 344322 22  22222    22333444333 


Q ss_pred             CCcccEEEeCCC
Q 020487          206 GKGVDVILDCMG  217 (325)
Q Consensus       206 ~~~~d~vi~~~g  217 (325)
                      ....|+++++.|
T Consensus        84 ~~~ld~~i~~ag   95 (268)
T d2h7ma1          84 GNKLDGVVHSIG   95 (268)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCcceeeeccc
Confidence            236899999887

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=95.98  E-value=0.05  Score=39.07  Aligned_cols=95  Identities=9%  Similarity=0.208  Sum_probs=60.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhh---HHHHHHcCCCEEEeCCCchHH-------------------
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEK---LAVCKDLGADVCINYKTEDFV-------------------  197 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~-------------------  197 (325)
                      +|.|+|+||.+|..+..+.+..  .++|++.+....-   .++++++....++-.+.....                   
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g~   82 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQ   82 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEESH
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccCh
Confidence            6899999999999999999988  4688887744432   244557887777655443221                   


Q ss_pred             HHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEE
Q 020487          198 ARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFI  236 (325)
Q Consensus       198 ~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~  236 (325)
                      +.+.+......+|+++....+ .-+...+..++.+=++.+
T Consensus        83 ~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaL  122 (151)
T d1q0qa2          83 QAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILL  122 (151)
T ss_dssp             HHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEE
Confidence            122333344457777776543 445666666666554443

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.97  E-value=0.018  Score=42.29  Aligned_cols=88  Identities=15%  Similarity=0.087  Sum_probs=61.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  220 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~  220 (325)
                      .+|.++|. |.+|...+.-+...|++|++.+++.++.+.+.+.+.....     ..    .+..  ...|+++.|+....
T Consensus         2 ~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~-----~~----~e~~--~~~diii~~v~~~~   69 (162)
T d3cuma2           2 KQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAAR-----SA----RDAV--QGADVVISMLPASQ   69 (162)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECS-----SH----HHHH--TSCSEEEECCSCHH
T ss_pred             CEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccc-----hh----hhhc--cccCeeeecccchh
Confidence            36889997 9999998888888899999999999999888887764321     11    1222  25799999988643


Q ss_pred             -HHHh-------hccccCCCEEEEEecc
Q 020487          221 -FQRN-------LGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       221 -~~~~-------~~~l~~~g~~v~~g~~  240 (325)
                       ....       ...+.++-.++.++..
T Consensus        70 ~~~~v~~~~~~~~~~l~~g~iiid~st~   97 (162)
T d3cuma2          70 HVEGLYLDDDGLLAHIAPGTLVLECSTI   97 (162)
T ss_dssp             HHHHHHHSTTCHHHHSCTTCEEEECSCC
T ss_pred             hHHHHHhccccccccCCCCCEEEECCCC
Confidence             2222       3345666677766543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.95  E-value=0.014  Score=47.20  Aligned_cols=77  Identities=21%  Similarity=0.231  Sum_probs=47.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEE---ecChhhHH----HHHHc---CCC-EEE--eCCCchHHHHHHHHhCCCc
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVT---AGSEEKLA----VCKDL---GAD-VCI--NYKTEDFVARVKEETGGKG  208 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~---~~~~~~~~----~~~~~---g~~-~~~--~~~~~~~~~~~~~~~~~~~  208 (325)
                      .+||+|+++++|.+++..+...|++|+.+   .++.+..+    .++++   +.. ..+  |-.+......+.+......
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~   83 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGR   83 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSC
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccc
Confidence            46899999999999999999999875544   44433322    22333   222 222  4444444444444444457


Q ss_pred             ccEEEeCCCh
Q 020487          209 VDVILDCMGA  218 (325)
Q Consensus       209 ~d~vi~~~g~  218 (325)
                      .|+++++.|.
T Consensus        84 idilvnnag~   93 (285)
T d1jtva_          84 VDVLVCNAGL   93 (285)
T ss_dssp             CSEEEECCCC
T ss_pred             hhhhhhcccc
Confidence            8999998864

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.93  E-value=0.007  Score=41.88  Aligned_cols=67  Identities=10%  Similarity=0.187  Sum_probs=46.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .++..++++|.|+ |.+|.-++..+..+|.+|+++.+.+.            ++...+....+.+.+.+...++++..++
T Consensus        18 ~l~~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~------------il~~~d~~~~~~~~~~l~~~gV~i~~~~   84 (117)
T d1onfa2          18 NIKESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR------------ILRKFDESVINVLENDMKKNNINIVTFA   84 (117)
T ss_dssp             TCCCCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS------------SCTTSCHHHHHHHHHHHHHTTCEEECSC
T ss_pred             ccCCCCEEEEECC-chHHHHHHHHHHhccccceeeehhcc------------ccccccHHHHHHHHHHHHhCCCEEEECC
Confidence            3455689999999 99999999999999999999997642            1222233444455554444566666543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.79  E-value=0.0068  Score=49.33  Aligned_cols=39  Identities=15%  Similarity=0.160  Sum_probs=33.6

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecChhhH
Q 020487          139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKL  177 (325)
Q Consensus       139 ~~~~vli~g~~g--~~G~~~~~~a~~~g~~v~~~~~~~~~~  177 (325)
                      +|+++||+|++|  ++|.++++.+...|++|++..+++...
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~   47 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALN   47 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhh
Confidence            488999999865  899999999999999999998766533

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.74  E-value=0.023  Score=41.52  Aligned_cols=97  Identities=14%  Similarity=0.067  Sum_probs=66.2

Q ss_pred             cCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHH
Q 020487          119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA  198 (325)
Q Consensus       119 ~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  198 (325)
                      .+|+.....+..|....---.|.+++|.|.+..+|.-++.++...|++|+.......                   +...
T Consensus        16 ~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~-------------------~l~~   76 (166)
T d1b0aa1          16 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK-------------------NLRH   76 (166)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS-------------------CHHH
T ss_pred             CCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccc-------------------hhHH
Confidence            344443444444433322236999999999999999999999999999987753321                   2222


Q ss_pred             HHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487          199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      .+      +..|+++.++|.+.+- --++++++..++.+|...
T Consensus        77 ~~------~~ADivI~a~G~p~~i-~~~~vk~g~vvIDvGi~~  112 (166)
T d1b0aa1          77 HV------ENADLLIVAVGKPGFI-PGDWIKEGAIVIDVGINR  112 (166)
T ss_dssp             HH------HHCSEEEECSCCTTCB-CTTTSCTTCEEEECCCEE
T ss_pred             HH------hhhhHhhhhccCcccc-cccccCCCcEEEecCcee
Confidence            22      1579999999976542 146789999999998753

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.74  E-value=0.015  Score=44.36  Aligned_cols=68  Identities=21%  Similarity=0.326  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+|+|.|. |.+|..+++.+...|++|++.+.+.++......+++..+ ... +        .. ...+|+++-|...
T Consensus        26 ~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~-~~~-~--------~~-~~~~DI~iPcA~~   93 (201)
T d1c1da1          26 DGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-ALE-D--------VL-STPCDVFAPCAMG   93 (201)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CGG-G--------GG-GCCCSEEEECSCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhccccc-Ccc-c--------cc-cccceeeeccccc
Confidence            5889999997 999999999999999999999999888888888877543 211 1        11 1368999988654

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.70  E-value=0.02  Score=47.14  Aligned_cols=101  Identities=17%  Similarity=0.195  Sum_probs=65.1

Q ss_pred             HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHHH----cC-----------CCE--EEeCC
Q 020487          132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKD----LG-----------ADV--CINYK  192 (325)
Q Consensus       132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~~----~g-----------~~~--~~~~~  192 (325)
                      ....+++||++||=.|+  +.|.++..+|+..|.  +|+.++.+++..+.+++    ++           .+.  +...+
T Consensus        91 l~~l~i~pG~rVLE~Gt--GsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d  168 (324)
T d2b25a1          91 LSMMDINPGDTVLEAGS--GSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  168 (324)
T ss_dssp             HHHHTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHhCCCCCCEEEEecc--cccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence            35678899999999986  348888899988764  89999999987766542    11           111  12222


Q ss_pred             CchHHHHHHHHhCCCcccEEEeCCCh--HHHHHhhccccCCCEEEEEe
Q 020487          193 TEDFVARVKEETGGKGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       193 ~~~~~~~~~~~~~~~~~d~vi~~~g~--~~~~~~~~~l~~~g~~v~~g  238 (325)
                      ...+...+    ....||.||--+..  ..+..+.+.|+|||+++.+-
T Consensus       169 i~~~~~~~----~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         169 ISGATEDI----KSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             TTCCC-----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             hhhccccc----CCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence            11111111    12358877744443  35788899999999999874

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.61  E-value=0.0094  Score=41.90  Aligned_cols=74  Identities=12%  Similarity=0.132  Sum_probs=53.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF  221 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~  221 (325)
                      +|.|+|++|.+|.++.+++...+.+++.......          ...+                 ..+|+++|.+..+.+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~----------~~~~-----------------~~~DVvIDFS~p~~~   54 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG----------VEEL-----------------DSPDVVIDFSSPEAL   54 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE----------EEEC-----------------SCCSEEEECSCGGGH
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc----------HHHh-----------------ccCCEEEEecCHHHH
Confidence            6899999999999999999999988776542110          0000                 257999999998887


Q ss_pred             HHhhccccCCCEEEEEeccCC
Q 020487          222 QRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       222 ~~~~~~l~~~g~~v~~g~~~~  242 (325)
                      ...++.....+.=+.+|..+-
T Consensus        55 ~~~l~~~~~~~~p~ViGTTG~   75 (128)
T d1vm6a3          55 PKTVDLCKKYRAGLVLGTTAL   75 (128)
T ss_dssp             HHHHHHHHHHTCEEEECCCSC
T ss_pred             HHHHHHHHhcCCCEEEEcCCC
Confidence            777666666666667776653

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=95.59  E-value=0.017  Score=47.98  Aligned_cols=79  Identities=10%  Similarity=0.039  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHH-HHHc---CCCEEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV-CKDL---GADVCINYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~-~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      .+.+|||+|++|-+|..+++.+...|++|++++++..+... .+..   ..-..+..+-.+ ...+.+......+|+++.
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d-~~~l~~~~~~~~~~~v~~   85 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD-QNKLLESIREFQPEIVFH   85 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC-HHHHHHHHHHHCCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccC-hHhhhhhhhhchhhhhhh
Confidence            37899999999999999999999999999999987654322 2211   112222222111 222333332235788988


Q ss_pred             CCCh
Q 020487          215 CMGA  218 (325)
Q Consensus       215 ~~g~  218 (325)
                      +++.
T Consensus        86 ~aa~   89 (356)
T d1rkxa_          86 MAAQ   89 (356)
T ss_dssp             CCSC
T ss_pred             hhcc
Confidence            8763

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.57  E-value=0.054  Score=44.60  Aligned_cols=39  Identities=10%  Similarity=0.051  Sum_probs=32.2

Q ss_pred             CCEEEEEc--CCchHHHHHHHHHHHCCCEEEEEecChhhHH
Q 020487          140 GESFLVHG--GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA  178 (325)
Q Consensus       140 ~~~vli~g--~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~  178 (325)
                      ++..||+|  ++.++|.++++.+...|++|++..++.....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~   42 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNI   42 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhh
Confidence            56789999  4569999999999999999999887665443

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.57  E-value=0.063  Score=41.96  Aligned_cols=96  Identities=14%  Similarity=0.142  Sum_probs=64.6

Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC-EEEeCCCchHHHHHHHHhC
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVKEETG  205 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~  205 (325)
                      +.......+..+||=+|+ | .|..+..+++ .|++|++++.+++-.+.+++    .+.. .++..+...+       .-
T Consensus        33 ~~~~~~~~~~~~iLDiGc-G-tG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l-------~~  102 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLAC-G-TGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEI-------AF  102 (251)
T ss_dssp             HHHHTCSSCCCEEEEETC-T-TCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGC-------CC
T ss_pred             HHHHhcCCCCCEEEEeCC-C-CCccchhhcc-cceEEEEEeeccccccccccccccccccchheehhhhhc-------cc
Confidence            334455677889999997 3 3777777776 58999999999987776653    2322 3443333221       12


Q ss_pred             CCcccEEEeCCCh----------HHHHHhhccccCCCEEEE
Q 020487          206 GKGVDVILDCMGA----------SYFQRNLGSLNIDGRLFI  236 (325)
Q Consensus       206 ~~~~d~vi~~~g~----------~~~~~~~~~l~~~g~~v~  236 (325)
                      .+.||+|+...+.          ..+..+.+.|+|||.++.
T Consensus       103 ~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         103 KNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             CSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             ccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            3479998876432          235677889999999875

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=95.50  E-value=0.039  Score=45.70  Aligned_cols=76  Identities=13%  Similarity=0.059  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHH--HHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA--VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      ...+|+|+|++|.+|..++..+...|++|++++|+..+..  .+.....-.++..+-.+....+.....  +.|.++...
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~--~~~~~~~~~   79 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFINT   79 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHT--TCSEEEECC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhc--CCceEEeec
Confidence            4578999999999999999999999999999998766432  233332223443332222233444444  466666544

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.44  E-value=0.015  Score=48.00  Aligned_cols=33  Identities=15%  Similarity=0.137  Sum_probs=30.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      .++||+||+|-+|..++..+...|++|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            478999999999999999999999999999974

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.44  E-value=0.014  Score=43.86  Aligned_cols=40  Identities=20%  Similarity=0.191  Sum_probs=35.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  181 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~  181 (325)
                      +|.|+|++|.+|.++++.+...|++|++..|++++.+.+.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~   41 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKA   41 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            6889977799999999999999999999999998876553

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=95.44  E-value=0.017  Score=48.19  Aligned_cols=34  Identities=15%  Similarity=0.152  Sum_probs=29.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      ..+||+||+|-+|..++..+...|.+|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            5689999999999999999999999999999754

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.37  E-value=0.016  Score=40.05  Aligned_cols=41  Identities=22%  Similarity=0.233  Sum_probs=36.1

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      +.....++.+++|.|+ |.+|+-+++.++..|.+|+++.+.+
T Consensus        15 ~~l~~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          15 EELDYEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             HHCCSCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             HHHhhCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            4455678999999998 9999999999999999999999764

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.35  E-value=0.02  Score=48.48  Aligned_cols=32  Identities=19%  Similarity=0.178  Sum_probs=29.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA  171 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~  171 (325)
                      |.+|||+|++|-+|..++..+...|++|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            67999999999999999999999999999986

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.32  E-value=0.019  Score=45.78  Aligned_cols=33  Identities=21%  Similarity=0.257  Sum_probs=30.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      +|||+||+|-+|..++..++..|.+|+++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh
Confidence            699999999999999999999999999998753

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.29  E-value=0.014  Score=45.62  Aligned_cols=96  Identities=17%  Similarity=0.085  Sum_probs=62.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCC---CEEEeCCCchHHHHHHHHhCCCcccEEE-
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA---DVCINYKTEDFVARVKEETGGKGVDVIL-  213 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~d~vi-  213 (325)
                      .+|.+||-+|+  +.|..+..+++..+.+|++++.++...+.+++...   ..+... ... ............||.++ 
T Consensus        52 ~~g~~VLdIGc--G~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~fD~i~f  127 (229)
T d1zx0a1          52 SKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPL-KGL-WEDVAPTLPDGHFDGILY  127 (229)
T ss_dssp             TTCEEEEEECC--TTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEE-ESC-HHHHGGGSCTTCEEEEEE
T ss_pred             cCCCeEEEeec--cchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccc-ccc-ccccccccccccccceee
Confidence            57889999996  56888888888777799999999998888875321   111111 111 22222233445788884 


Q ss_pred             eCCCh-----------HHHHHhhccccCCCEEEEE
Q 020487          214 DCMGA-----------SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       214 ~~~g~-----------~~~~~~~~~l~~~g~~v~~  237 (325)
                      |....           ..+..+.+.|+|||+++..
T Consensus       128 D~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         128 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             cccccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            54322           1245677889999999763

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.24  E-value=0.017  Score=39.82  Aligned_cols=63  Identities=25%  Similarity=0.299  Sum_probs=43.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .++++|.|+ |.+|.-+++.+..+|.+|+++.+.+.-            +..-+....+.+.+.+..+++++..++
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~i------------l~~~d~~~~~~l~~~l~~~GI~i~~~~   84 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGEI------------LSGFEKQMAAIIKKRLKKKGVEVVTNA   84 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS------------STTSCHHHHHHHHHHHHHTTCEEEESE
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEeccee------------cccccchhHHHHHHHHHhcCCEEEcCC
Confidence            478999999 999999999999999999999977532            111122334444444444567766643

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.23  E-value=0.044  Score=40.63  Aligned_cols=95  Identities=13%  Similarity=-0.007  Sum_probs=62.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH-
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-  219 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-  219 (325)
                      .+|.++|. |.+|...+.-+...|++|++..+++++.+.+.+.++..... ........+.+...  ..|.++-++... 
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~-~~a~~~~~~~~~~~--~~~~ii~~~~~~~   78 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKV-LGAHSLEEMVSKLK--KPRRIILLVKAGQ   78 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSC-EECSSHHHHHHHBC--SSCEEEECSCTTH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccc-cchhhhhhhhhhhc--ccceEEEecCchH
Confidence            35889998 99999999999889999999999999998887655421000 00111333444433  467777776542 


Q ss_pred             H----HHHhhccccCCCEEEEEec
Q 020487          220 Y----FQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       220 ~----~~~~~~~l~~~g~~v~~g~  239 (325)
                      .    ...+...++++..++.++.
T Consensus        79 ~v~~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          79 AVDNFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHHHHhccccCcEEEecCc
Confidence            2    3344556677777776643

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.21  E-value=0.0089  Score=46.90  Aligned_cols=36  Identities=42%  Similarity=0.476  Sum_probs=32.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK  176 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~  176 (325)
                      +++||+|+++++|.++++.+...|++|+++.++++.
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~   37 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG   37 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence            578999999999999999999999999999987653

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.20  E-value=0.0097  Score=45.01  Aligned_cols=84  Identities=17%  Similarity=0.219  Sum_probs=56.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC------EEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD------VCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      +|.|+|+ |.+|.+++.++...|.+|++..++++..+.+.+-+.+      ..++.+ -....++.+...  ..|+++-+
T Consensus         9 KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~-i~~t~~l~~a~~--~ad~iiia   84 (189)
T d1n1ea2           9 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASN-ITFTSDVEKAYN--GAEIILFV   84 (189)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTT-EEEESCHHHHHT--TCSCEEEC
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccc-cccchhhhhccC--CCCEEEEc
Confidence            6999998 9999999999988888999999999888777642211      111111 001112233332  57999999


Q ss_pred             CChHHHHHhhcccc
Q 020487          216 MGASYFQRNLGSLN  229 (325)
Q Consensus       216 ~g~~~~~~~~~~l~  229 (325)
                      ++...+...++.++
T Consensus        85 vPs~~~~~~~~~~~   98 (189)
T d1n1ea2          85 IPTQFLRGFFEKSG   98 (189)
T ss_dssp             SCHHHHHHHHHHHC
T ss_pred             CcHHHHHHHHHHHH
Confidence            99877666665543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.19  E-value=0.048  Score=40.91  Aligned_cols=89  Identities=11%  Similarity=-0.048  Sum_probs=62.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .+.++.|.|. |.+|..+++.++.+|.+|+..++........+..+.....         .+.+...  ..|+|.-+..-
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~---------~l~~~l~--~sD~v~~~~pl  110 (188)
T d2naca1          43 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHA---------TREDMYP--VCDVVTLNCPL  110 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECS---------SHHHHGG--GCSEEEECSCC
T ss_pred             cccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccccccccccC---------CHHHHHH--hccchhhcccc
Confidence            4789999998 9999999999999999999999776555555554432211         1122222  57888776652


Q ss_pred             -HH-----HHHhhccccCCCEEEEEec
Q 020487          219 -SY-----FQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 -~~-----~~~~~~~l~~~g~~v~~g~  239 (325)
                       +.     -...++.|+++..+|-++.
T Consensus       111 t~~T~~li~~~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         111 HPETEHMINDETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             CTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             cccchhhhHHHHHHhCCCCCEEEecCc
Confidence             21     2466788888888887754

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.18  E-value=0.014  Score=40.65  Aligned_cols=63  Identities=16%  Similarity=0.094  Sum_probs=43.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .++++|+|+ |.+|+-+++++..+|.+|+++.+.+.            ++...+......+.+.+..+++++..++
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~------------~l~~~d~ei~~~l~~~l~~~GV~i~~~~   85 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ------------IGASMDGEVAKATQKFLKKQGLDFKLST   85 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS------------SSSSSCHHHHHHHHHHHHHTTCEEECSE
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc------------cchhhhhhhHHHHHHHHHhccceEEeCC
Confidence            478999998 99999999999999999999997642            1222233334444444444466666643

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.18  E-value=0.014  Score=40.66  Aligned_cols=62  Identities=19%  Similarity=0.149  Sum_probs=43.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .++++|+|+ |.+|+-++++++.+|.+|+++.++ .   .+         ..-+....+.+.+.+..+++++..++
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~-~---~l---------~~~D~~~~~~l~~~l~~~Gv~i~~~~   81 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS-I---LL---------RGFDQDMANKIGEHMEEHGIKFIRQF   81 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS-S---SS---------TTSCHHHHHHHHHHHHHTTEEEEESC
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec-h---hh---------ccCCHHHHHHHHHHHHHCCCEEEECC
Confidence            467999998 999999999999999999999854 1   11         11223334455555555567777654

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.12  E-value=0.041  Score=41.62  Aligned_cols=86  Identities=14%  Similarity=0.083  Sum_probs=57.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.+|.|+|. |.+|..++++++.+|++|++.++........  .+. .     ..++.+.+ .     ..|+++-++.-
T Consensus        42 ~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~--~~~-~-----~~~l~~~l-~-----~sDii~~~~pl  106 (197)
T d1j4aa1          42 RDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELEK--KGY-Y-----VDSLDDLY-K-----QADVISLHVPD  106 (197)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHH--TTC-B-----CSCHHHHH-H-----HCSEEEECSCC
T ss_pred             cCCeEEEecc-cccchhHHHhHhhhcccccccCccccccccc--cee-e-----eccccccc-c-----ccccccccCCc
Confidence            3789999998 9999999999999999999998665433222  121 1     11222222 1     47888887763


Q ss_pred             -HH----H-HHhhccccCCCEEEEEec
Q 020487          219 -SY----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 -~~----~-~~~~~~l~~~g~~v~~g~  239 (325)
                       +.    + ...++.|+++..+|-++.
T Consensus       107 t~~T~~li~~~~l~~mk~~a~lIN~sR  133 (197)
T d1j4aa1         107 VPANVHMINDESIAKMKQDVVIVNVSR  133 (197)
T ss_dssp             CGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             cccccccccHHHHhhhCCccEEEecCc
Confidence             21    2 455778888888887753

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.12  E-value=0.077  Score=38.88  Aligned_cols=96  Identities=14%  Similarity=0.091  Sum_probs=66.6

Q ss_pred             cCcchHHHHHHHHHhhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHH
Q 020487          119 AFPEVACTVWSTVFMTSHL-SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV  197 (325)
Q Consensus       119 ~l~~~~~~a~~~l~~~~~~-~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  197 (325)
                      .+|+.....+..| ++-++ -.|.++.|.|.+..+|.-++.++.+.|++|+.+........                   
T Consensus        18 ~~PcTp~aii~lL-~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~-------------------   77 (170)
T d1a4ia1          18 FIPCTPKGCLELI-KETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD-------------------   77 (170)
T ss_dssp             CCCHHHHHHHHHH-HTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------
T ss_pred             CCCChHHHHHHHH-HHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH-------------------
Confidence            3444444444444 33333 36899999999999999999999999999998774322221                   


Q ss_pred             HHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487          198 ARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       198 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                          +.+  +..|+++.++|.+.+- --++++++..++++|...
T Consensus        78 ----~~~--~~aDivi~a~G~~~~i-~~~~vk~g~iviDvgi~~  114 (170)
T d1a4ia1          78 ----EEV--NKGDILVVATGQPEMV-KGEWIKPGAIVIDCGINY  114 (170)
T ss_dssp             ----HHH--TTCSEEEECCCCTTCB-CGGGSCTTCEEEECCCBC
T ss_pred             ----HHH--hhccchhhcccccccc-ccccccCCCeEeccCccc
Confidence                112  2579999999986642 246889999999988643

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=95.10  E-value=0.045  Score=44.09  Aligned_cols=75  Identities=24%  Similarity=0.363  Sum_probs=48.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh-----HHH---HHHcCCCEEEeCCCchHHHHHHHHhCCCcccE
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-----LAV---CKDLGADVCINYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~-----~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      -.+|||+|++|-+|..++..+...|.+|++++|+...     ...   ....+.. ++..+-.+ ...+.+...  +.+.
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~-~v~~d~~d-~~~~~~~~~--~~~~   78 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASLDD-HQRLVDALK--QVDV   78 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCSSC-HHHHHHHHT--TCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcE-EEEeeccc-chhhhhhcc--Ccch
Confidence            4569999999999999999999999999999986431     222   2233443 33322222 233344443  5677


Q ss_pred             EEeCCCh
Q 020487          212 ILDCMGA  218 (325)
Q Consensus       212 vi~~~g~  218 (325)
                      ++.+.+.
T Consensus        79 ~~~~~~~   85 (312)
T d1qyda_          79 VISALAG   85 (312)
T ss_dssp             EEECCCC
T ss_pred             hhhhhhh
Confidence            7777653

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.10  E-value=0.046  Score=42.38  Aligned_cols=104  Identities=12%  Similarity=-0.028  Sum_probs=65.1

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC-------------EEEeCCCc---hH
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-------------VCINYKTE---DF  196 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-------------~~~~~~~~---~~  196 (325)
                      ....+.++.+||..|+  +.|..+..+|+ .|++|++++.+++..+.+++....             ........   ..
T Consensus        39 ~~l~~~~~~rvLd~GC--G~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPLC--GKAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETTC--TTCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeCC--CCcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            3345688999999997  34788888876 599999999999988877642211             11000000   00


Q ss_pred             HHHHHH--HhCCCcccEEEeCCCh---------HHHHHhhccccCCCEEEEEec
Q 020487          197 VARVKE--ETGGKGVDVILDCMGA---------SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       197 ~~~~~~--~~~~~~~d~vi~~~g~---------~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ..++.+  ......+|+|+++..-         ..+..+.+.|+|||+++....
T Consensus       116 ~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~  169 (229)
T d2bzga1         116 CCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVL  169 (229)
T ss_dssp             ESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             EcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEc
Confidence            000111  1123368999987532         235677899999999876654

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.06  E-value=0.022  Score=39.30  Aligned_cols=36  Identities=19%  Similarity=0.054  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      ..++++|+|+ |.+|.-+++.+..+|.+|+++.+.+.
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            3588999998 99999999999999999999997643

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.01  E-value=0.25  Score=40.36  Aligned_cols=101  Identities=12%  Similarity=0.197  Sum_probs=65.6

Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHH-----------cCC--C--EEEeCCCc
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-----------LGA--D--VCINYKTE  194 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~-----------~g~--~--~~~~~~~~  194 (325)
                      +.+..+++++++++=+|+  +.|..+.++|+..++ +++.++.++...+.+++           .|.  .  .++..+..
T Consensus       143 ~~~~~~l~~~~~vlD~Gc--G~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~  220 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLGS--GVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL  220 (328)
T ss_dssp             HHHHSCCCTTCEEEEETC--TTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTT
T ss_pred             HHHHcCCCCCCEEEEcCC--CCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccc
Confidence            447788999999999985  579999999999887 79999999886654432           121  1  23333322


Q ss_pred             hHHHHHHHHhCCCcccEEEeCC---Ch---HHHHHhhccccCCCEEEEE
Q 020487          195 DFVARVKEETGGKGVDVILDCM---GA---SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       195 ~~~~~~~~~~~~~~~d~vi~~~---g~---~~~~~~~~~l~~~g~~v~~  237 (325)
                      ..  ...+...  .+|+|+-..   +.   ..+..+++.|+|||++|..
T Consensus       221 ~~--~~~~~~~--~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~  265 (328)
T d1nw3a_         221 SE--EWRERIA--NTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSS  265 (328)
T ss_dssp             SH--HHHHHHH--HCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred             cc--ccccccC--cceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEe
Confidence            21  1112111  357776422   22   2356778899999999975

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.96  E-value=0.058  Score=41.30  Aligned_cols=93  Identities=15%  Similarity=0.185  Sum_probs=61.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC-EEEeCCCchHHHHHHHHhCCCccc
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      .+.++++||-+|+  +.|..+..+++ .|++|++++.+++..+.+++    .+.. ..+..+.....      .....||
T Consensus        34 ~l~~~~~ILDiGc--G~G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~------~~~~~fD  104 (226)
T d1ve3a1          34 YMKKRGKVLDLAC--GVGGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS------FEDKTFD  104 (226)
T ss_dssp             SCCSCCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC------SCTTCEE
T ss_pred             hcCCCCEEEEECC--CcchhhhhHhh-hhcccccccccccchhhhhhhhcccccccccccccccccc------ccCcCce
Confidence            3578899999997  34777777776 48999999999888776653    3322 22222222110      1234699


Q ss_pred             EEEeCCC-----hH----HHHHhhccccCCCEEEEE
Q 020487          211 VILDCMG-----AS----YFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       211 ~vi~~~g-----~~----~~~~~~~~l~~~g~~v~~  237 (325)
                      +|+....     ..    .+..+.+.|+|||+++..
T Consensus       105 ~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         105 YVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             EEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            9876433     21    256778899999998765

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.92  E-value=0.018  Score=42.16  Aligned_cols=90  Identities=14%  Similarity=0.077  Sum_probs=57.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC--EEEeCCCchHHHHHHHHhCCCcccEEEeCCChH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD--VCINYKTEDFVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      +|+|+|+ |.+|.+.+..+...|.+|..+.+++++....+..+.+  .............+      ..+|++|-|+...
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~D~iii~vka~   74 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFL------ATSDLLLVTLKAW   74 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHH------HTCSEEEECSCGG
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchhhhh------cccceEEEeeccc
Confidence            6899999 9999999999999999999999887644332222211  11110011111111      1689999999875


Q ss_pred             HHH----HhhccccCCCEEEEEe
Q 020487          220 YFQ----RNLGSLNIDGRLFIIG  238 (325)
Q Consensus       220 ~~~----~~~~~l~~~g~~v~~g  238 (325)
                      .+.    .+...+.++..++.+.
T Consensus        75 ~~~~~~~~l~~~~~~~~~Iv~~q   97 (167)
T d1ks9a2          75 QVSDAVKSLASTLPVTTPILLIH   97 (167)
T ss_dssp             GHHHHHHHHHTTSCTTSCEEEEC
T ss_pred             chHHHHHhhccccCcccEEeecc
Confidence            543    3344556667777663

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.90  E-value=0.051  Score=42.09  Aligned_cols=100  Identities=21%  Similarity=0.105  Sum_probs=65.7

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHHH----cCCCEEEeCCCchHHHHHHHHhCC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~  206 (325)
                      +...++||++||=+|+  +.|..+..+++..|  .+|++++.+++..+.+++    .+....+..+.... ....  ...
T Consensus        67 ~~l~i~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~-~~~~--~~~  141 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKP-EEYR--ALV  141 (227)
T ss_dssp             CCCCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCG-GGGT--TTC
T ss_pred             cccccCCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCc-cccc--ccc
Confidence            5567899999999997  35888889998875  489999999998777654    22222222222111 1111  112


Q ss_pred             CcccEEEeCCCh-----HHHHHhhccccCCCEEEEE
Q 020487          207 KGVDVILDCMGA-----SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       207 ~~~d~vi~~~g~-----~~~~~~~~~l~~~g~~v~~  237 (325)
                      ..+|+++.....     ..+..+.+.|+++|+++.+
T Consensus       142 ~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence            357888765432     1356777899999998875

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=94.86  E-value=0.14  Score=36.67  Aligned_cols=93  Identities=19%  Similarity=0.136  Sum_probs=61.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH-HHH---HHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVC---KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~-~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      +.++|.|. |.+|..+++.+...|.+++++..++++. ...   ...+.. ++..+..+ . ...+..+-..++.++-+.
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~-vi~Gd~~d-~-~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSND-S-SVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTS-H-HHHHHHTTTTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcE-EEEccCcc-h-HHHHHhccccCCEEEEcc
Confidence            46899998 9999999999999999999998776543 222   223443 44344333 2 334445556789999988


Q ss_pred             ChHH----HHHhhccccCCCEEEEE
Q 020487          217 GASY----FQRNLGSLNIDGRLFII  237 (325)
Q Consensus       217 g~~~----~~~~~~~l~~~g~~v~~  237 (325)
                      +.+.    +....+.+.+.-+++..
T Consensus        80 ~~d~~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          80 DNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             SCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             ccHHHHHHHHHHHHHhCCCCceEEE
Confidence            8654    23334556677777755

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=94.81  E-value=0.021  Score=47.25  Aligned_cols=72  Identities=13%  Similarity=0.094  Sum_probs=45.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHHHcCCCEEEeCC--C-chHHHHHHHHhCCCcccEEEeCCC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYK--T-EDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~-~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +|||+|++|-+|..+++.+...| .+|+++++.........+...-..+..+  . ..+.+.+   .  .++|+|+.+++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~---~--~~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYH---V--KKCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHH---H--HHCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHH---H--hCCCccccccc
Confidence            69999999999999998887777 5899998765544433322111233222  2 2222222   1  26899999876


Q ss_pred             h
Q 020487          218 A  218 (325)
Q Consensus       218 ~  218 (325)
                      .
T Consensus        77 ~   77 (342)
T d2blla1          77 I   77 (342)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=94.81  E-value=0.051  Score=44.76  Aligned_cols=74  Identities=20%  Similarity=0.219  Sum_probs=46.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh----hhHHHHHH---cCCCEEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE----EKLAVCKD---LGADVCINYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~----~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      +|||+||+|-+|..++..+...|.+|+++++..    ......+.   -... .+..+-.+ .+.+.+.....++|+||.
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d-~~~l~~~~~~~~~d~ViH   79 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPT-FVEGDIRN-EALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCE-EEECCTTC-HHHHHHHHHHTTCSEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCE-EEEeecCC-HHHHHHHHhccCCCEEEE
Confidence            699999999999999999999999999987422    12222222   2222 23222222 223344333346899999


Q ss_pred             CCC
Q 020487          215 CMG  217 (325)
Q Consensus       215 ~~g  217 (325)
                      +++
T Consensus        80 lAa   82 (338)
T d1udca_          80 FAG   82 (338)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            874

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.80  E-value=0.013  Score=40.92  Aligned_cols=65  Identities=15%  Similarity=0.097  Sum_probs=45.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      +..++++|+|+ |.+|+-+++..+.+|.+|+++.+++.-+            ...+......+.+.+..+++++..++
T Consensus        23 ~~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~l------------~~~d~~~~~~l~~~l~~~GI~i~~~~   87 (123)
T d1dxla2          23 EIPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEIV------------PTMDAEIRKQFQRSLEKQGMKFKLKT   87 (123)
T ss_dssp             SCCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSSS------------TTSCHHHHHHHHHHHHHSSCCEECSE
T ss_pred             ccCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccccC------------chhhhcchhhhhhhhhcccceEEcCC
Confidence            34578999998 9999999999999999999999775321            12223334444554444566666543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=94.78  E-value=0.017  Score=45.78  Aligned_cols=35  Identities=14%  Similarity=0.271  Sum_probs=31.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      +.|||+|+++++|.++++.+...|++|++++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            35799999999999999999999999999997653

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.70  E-value=0.038  Score=46.00  Aligned_cols=76  Identities=16%  Similarity=0.122  Sum_probs=49.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +.+.+|||+||+|-+|..++..+...|.+|+++++...... ............+-.+. ..+.+...  ++|.|+.+++
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~-~~~~~~~~~~~~D~~~~-~~~~~~~~--~~d~Vih~a~   88 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-TEDMFCDEFHLVDLRVM-ENCLKVTE--GVDHVFNLAA   88 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-CGGGTCSEEEECCTTSH-HHHHHHHT--TCSEEEECCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch-hhhcccCcEEEeechhH-HHHHHHhh--cCCeEeeccc
Confidence            35789999999999999999999999999999975433221 11222223332332222 23344442  6899998774

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=94.69  E-value=0.13  Score=36.76  Aligned_cols=53  Identities=17%  Similarity=0.193  Sum_probs=42.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT  193 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~  193 (325)
                      .+|.|+|+.|.+|...+..++..|++|.+.+++..........+++.++....
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~v~~~~~   62 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVP   62 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhhhccccccccc
Confidence            57999996699999999999999999999998877665555556666554443

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.68  E-value=0.017  Score=39.73  Aligned_cols=35  Identities=17%  Similarity=0.052  Sum_probs=31.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      .++++|.|+ |.+|+-+++.++.+|.+|+++.+.+.
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            468999998 99999999999999999999997753

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.67  E-value=0.12  Score=37.92  Aligned_cols=98  Identities=16%  Similarity=0.118  Sum_probs=60.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-CEEEEEecC--hhhHHHHHHcCCCEEEeCCCchHHHHHHHHh-C--------CCcc
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGS--EEKLAVCKDLGADVCINYKTEDFVARVKEET-G--------GKGV  209 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~--------~~~~  209 (325)
                      +|.|.|. |.+|..+.+.+.... .+++.+...  ......+...+.+....... . .....+.. .        ..++
T Consensus         4 rIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~v   80 (172)
T d2czca2           4 KVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEE-F-IPRFEKEGFEVAGTLNDLLEKV   80 (172)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGG-G-HHHHHHHTCCCSCBHHHHHTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeeccccc-c-eeeecccCccccchhhhhhccC
Confidence            6899997 999999998887654 577777643  23344555666554332111 1 11111110 0        1269


Q ss_pred             cEEEeCCChHH-HHHhhccccCCCEEEEEeccCC
Q 020487          210 DVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       210 d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                      |+|+||+|.-. ...+-..+..|-+.|.++.+..
T Consensus        81 DvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~  114 (172)
T d2czca2          81 DIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEKA  114 (172)
T ss_dssp             SEEEECCSTTHHHHHHHHHHHHTCEEEECTTSCG
T ss_pred             CEEEECCCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence            99999999754 3555567888888888876543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.62  E-value=0.0098  Score=46.52  Aligned_cols=76  Identities=17%  Similarity=0.172  Sum_probs=47.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      .+.+|||+||+|-+|..+++.+...|.  +|++++|++........-.. .....+... .+.+.+..  .++|+++.|+
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i-~~~~~D~~~-~~~~~~~~--~~~d~vi~~~   88 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNV-NQEVVDFEK-LDDYASAF--QGHDVGFCCL   88 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGC-EEEECCGGG-GGGGGGGG--SSCSEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccccccee-eeeeecccc-cccccccc--cccccccccc
Confidence            457899999999999999998877775  89999986543321111111 121111111 12233333  3689999998


Q ss_pred             Ch
Q 020487          217 GA  218 (325)
Q Consensus       217 g~  218 (325)
                      |.
T Consensus        89 ~~   90 (232)
T d2bkaa1          89 GT   90 (232)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.62  E-value=0.035  Score=41.44  Aligned_cols=83  Identities=16%  Similarity=0.106  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.++.|+|. |.+|..++++++.+|++|++..++....       .....    .+    +.+...  ..|+|+-++.-
T Consensus        41 ~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~-------~~~~~----~~----l~ell~--~sDiv~~~~pl  102 (181)
T d1qp8a1          41 QGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEG-------PWRFT----NS----LEEALR--EARAAVCALPL  102 (181)
T ss_dssp             TTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCS-------SSCCB----SC----SHHHHT--TCSEEEECCCC
T ss_pred             cCceEEEecc-ccccccceeeeecccccccccccccccc-------ceeee----ec----hhhhhh--ccchhhccccc
Confidence            4789999998 9999999999999999999998764321       11111    11    223332  57999887753


Q ss_pred             -HH----H-HHhhccccCCCEEEEEec
Q 020487          219 -SY----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 -~~----~-~~~~~~l~~~g~~v~~g~  239 (325)
                       +.    + ...++.|+++..+|.++.
T Consensus       103 ~~~t~~li~~~~l~~mk~~ailIN~~R  129 (181)
T d1qp8a1         103 NKHTRGLVKYQHLALMAEDAVFVNVGR  129 (181)
T ss_dssp             STTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             ccccccccccceeeeccccceEEeccc
Confidence             11    2 566788999999998763

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=94.60  E-value=0.011  Score=42.83  Aligned_cols=83  Identities=11%  Similarity=0.081  Sum_probs=52.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHH
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQ  222 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~  222 (325)
                      |-++|+ |.+|.+.+..++..+.-+.+..|+.++.+.+.+.+.....+..+ .          -+..|+||-|+.+..+.
T Consensus         2 IgfIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~-~----------~~~~DiVil~v~d~~i~   69 (153)
T d2i76a2           2 LNFVGT-GTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEK-H----------PELNGVVFVIVPDRYIK   69 (153)
T ss_dssp             CEEESC-CHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCC-C----------CC---CEEECSCTTTHH
T ss_pred             EEEEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhh-h----------hccCcEEEEeccchhhh
Confidence            356787 99999988877553333457889999888777655443322211 1          12579999999998888


Q ss_pred             HhhccccCCCE-EEEE
Q 020487          223 RNLGSLNIDGR-LFII  237 (325)
Q Consensus       223 ~~~~~l~~~g~-~v~~  237 (325)
                      ...+.+...+. ++.+
T Consensus        70 ~v~~~l~~~~~ivi~~   85 (153)
T d2i76a2          70 TVANHLNLGDAVLVHC   85 (153)
T ss_dssp             HHHTTTCCSSCCEEEC
T ss_pred             HHHhhhcccceeeeec
Confidence            88888875444 4554

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.56  E-value=0.081  Score=43.62  Aligned_cols=74  Identities=16%  Similarity=0.170  Sum_probs=46.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh----hHH---HHHHcCCCEEE-eCCCchHHHHHHHHhCCCcccEE
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE----KLA---VCKDLGADVCI-NYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~----~~~---~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      ..|||+|++|-+|..++..+...|.+|+++++...    ...   ....-+...+. |-.+   .+.+.+.....++|+|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d---~~~l~~~~~~~~~d~V   78 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD---RKGLEKVFKEYKIDSV   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTC---HHHHHHHHHHSCCCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCC---HHHHHHHHhccCCCEE
Confidence            46899999999999999999999999999863211    111   12222333222 2222   2233333333468999


Q ss_pred             EeCCC
Q 020487          213 LDCMG  217 (325)
Q Consensus       213 i~~~g  217 (325)
                      +.+++
T Consensus        79 ihlAa   83 (347)
T d1z45a2          79 IHFAG   83 (347)
T ss_dssp             EECCS
T ss_pred             EEccc
Confidence            99876

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.46  E-value=0.034  Score=37.81  Aligned_cols=38  Identities=18%  Similarity=0.283  Sum_probs=32.7

Q ss_pred             CCCC-CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          137 LSPG-ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       137 ~~~~-~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      +.|+ .+|.|+|+ |-+|.++++.|+.+|+++++.+.++.
T Consensus         7 ~~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~   45 (111)
T d1kjqa2           7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYAD   45 (111)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CCCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            3444 56999998 99999999999999999999997654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.44  E-value=0.054  Score=37.38  Aligned_cols=67  Identities=21%  Similarity=0.313  Sum_probs=47.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      ++++.+++|.|+ |.+|.-++..++..|.+|+++.+++.-+.           ........+.+.+.....++++..++
T Consensus        27 ~~~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~l~-----------~~~~~~~~~~~~~~l~~~GV~i~~~~   93 (121)
T d1d7ya2          27 LRPQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRLMS-----------RAAPATLADFVARYHAAQGVDLRFER   93 (121)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSTTT-----------TTSCHHHHHHHHHHHHTTTCEEEESC
T ss_pred             hhcCCeEEEECc-chhHHHHHHHhhcccceEEEEeecccccc-----------ccCCHHHHHHHHHHHHHCCcEEEeCC
Confidence            467899999998 99999999999999999999997753211           01123334455555555677777654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.30  E-value=0.05  Score=40.97  Aligned_cols=39  Identities=26%  Similarity=0.317  Sum_probs=34.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC  180 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (325)
                      ++|.|+|+ |.+|...++++...|++|++.+++++..+.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHH
Confidence            57999998 9999999999999999999999998866544

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.25  E-value=0.01  Score=44.98  Aligned_cols=97  Identities=10%  Similarity=0.197  Sum_probs=62.6

Q ss_pred             HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cC--CC--EEEeCCCchHHHHHHH
Q 020487          131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LG--AD--VCINYKTEDFVARVKE  202 (325)
Q Consensus       131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g--~~--~~~~~~~~~~~~~~~~  202 (325)
                      |.+.....++++||=+|+  +.|..++.+++ .+.+|++++.++...+.+++    .+  ..  .++..+...       
T Consensus        44 Li~~l~~~~~~~VLDiGc--G~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~-------  113 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGC--GYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-------  113 (194)
T ss_dssp             HHHHCCCCTTCEEEEETC--TTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-------
T ss_pred             HHHhCCcCCCCeEEEEee--cCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhh-------
Confidence            345667788999999986  34666666665 46799999999887776653    22  21  222222211       


Q ss_pred             HhCCCcccEEEeCC----ChH----HHHHhhccccCCCEEEEE
Q 020487          203 ETGGKGVDVILDCM----GAS----YFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       203 ~~~~~~~d~vi~~~----g~~----~~~~~~~~l~~~g~~v~~  237 (325)
                      ....+.||+|+...    +.+    .+..+.+.|+|+|.++..
T Consensus       114 ~~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         114 NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhccCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence            12235799999642    332    256677889999998764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.21  E-value=0.022  Score=39.68  Aligned_cols=34  Identities=9%  Similarity=0.038  Sum_probs=31.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      .++++|.|+ |.+|+-++..++.+|.+|+++.+++
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            368999998 9999999999999999999999764

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=94.00  E-value=0.063  Score=41.57  Aligned_cols=98  Identities=12%  Similarity=0.128  Sum_probs=64.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHH----HcCCCEEEeCCCchHHHHHHHHh----CCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEET----GGK  207 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~----~~~  207 (325)
                      ...++||-+|  +..|.+++.+|+.+  +.+|+.++.+++..+.++    +.|....+........+.+.+..    ..+
T Consensus        58 ~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~~~~~~  135 (227)
T d1susa1          58 INAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHG  135 (227)
T ss_dssp             HTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCGGGTT
T ss_pred             cCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhccccCC
Confidence            4568899999  57899999999887  569999999988776665    34543222222222233333331    234


Q ss_pred             cccEEEeCCC-h---HHHHHhhccccCCCEEEEE
Q 020487          208 GVDVILDCMG-A---SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       208 ~~d~vi~~~g-~---~~~~~~~~~l~~~g~~v~~  237 (325)
                      .||+||-=.. .   ..+..+++.|++||.++.=
T Consensus       136 ~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~D  169 (227)
T d1susa1         136 SYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  169 (227)
T ss_dssp             CBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             ceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEc
Confidence            6999974333 2   3467888999999988863

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.90  E-value=0.16  Score=38.03  Aligned_cols=88  Identities=8%  Similarity=-0.016  Sum_probs=59.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh-
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-  218 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-  218 (325)
                      |.++.|+|. |.+|..++++++..|++|+..++...........+....     .++. .+..     ..|+|.-++.- 
T Consensus        47 g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~-----~~l~-~ll~-----~sD~v~l~~plt  114 (191)
T d1gdha1          47 NKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFH-----DSLD-SLLS-----VSQFFSLNAPST  114 (191)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEEC-----SSHH-HHHH-----HCSEEEECCCCC
T ss_pred             ccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhccccccc-----CCHH-HHHh-----hCCeEEecCCCC
Confidence            789999998 999999999999999999999876554433333222111     1111 2221     46888876652 


Q ss_pred             HH----H-HHhhccccCCCEEEEEec
Q 020487          219 SY----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 ~~----~-~~~~~~l~~~g~~v~~g~  239 (325)
                      +.    + ...++.|+++..+|-++.
T Consensus       115 ~~T~~li~~~~l~~mk~~a~lIN~sR  140 (191)
T d1gdha1         115 PETRYFFNKATIKSLPQGAIVVNTAR  140 (191)
T ss_dssp             TTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             chHhheecHHHhhCcCCccEEEecCC
Confidence            21    2 466788999998887754

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.89  E-value=0.12  Score=42.26  Aligned_cols=101  Identities=19%  Similarity=0.190  Sum_probs=61.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHHhCCC
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      .+++|++||=.++  ..|...+.+++. |+ +|+.++.+++..+.+++    .|..   .++..+...+...+.  ..++
T Consensus       142 ~~~~g~~VLDl~~--g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~--~~~~  216 (324)
T d2as0a2         142 WVQPGDRVLDVFT--YTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQ--KKGE  216 (324)
T ss_dssp             GCCTTCEEEETTC--TTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH--HTTC
T ss_pred             hcCCCCeeecccC--cccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHH--hccC
Confidence            3578999988876  334444555554 66 89999999998877653    3432   223222222222221  2345


Q ss_pred             cccEEEeCCCh----------------HHHHHhhccccCCCEEEEEeccC
Q 020487          208 GVDVILDCMGA----------------SYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       208 ~~d~vi~~~g~----------------~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      .||+|+--.+.                ..+..+++.|+|||.++.+....
T Consensus       217 ~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s~  266 (324)
T d2as0a2         217 KFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ  266 (324)
T ss_dssp             CEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred             CCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence            79999853221                12456678999999999885433

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.89  E-value=0.041  Score=38.26  Aligned_cols=36  Identities=22%  Similarity=0.157  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      +..++++|.|+ |.+|+=+++..+.+|.+|+++.+.+
T Consensus        24 ~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            34588999998 9999999999999999999999664

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=93.81  E-value=0.087  Score=42.00  Aligned_cols=75  Identities=19%  Similarity=0.272  Sum_probs=48.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH------HHHH---HcCCCEEEeCCCchHHHHHHHHhCCCcccE
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL------AVCK---DLGADVCINYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~------~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      .+|||+||+|-+|..++..+...|.+|++++|+....      ....   ..+. .++..+..... ...+...  +.+.
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~-~~~~~~~--~~~~   79 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA-NIVHGSIDDHA-SLVEAVK--NVDV   79 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTC-EEECCCTTCHH-HHHHHHH--TCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCc-EEEEeecccch-hhhhhhh--hcee
Confidence            5799999999999999999999999999999765432      2222   2233 34433333322 2233322  5688


Q ss_pred             EEeCCChH
Q 020487          212 ILDCMGAS  219 (325)
Q Consensus       212 vi~~~g~~  219 (325)
                      ++.+.+..
T Consensus        80 vi~~~~~~   87 (307)
T d1qyca_          80 VISTVGSL   87 (307)
T ss_dssp             EEECCCGG
T ss_pred             eeeccccc
Confidence            88887753

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.73  E-value=0.039  Score=43.44  Aligned_cols=34  Identities=35%  Similarity=0.245  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      .++|+|+|+ |..|++++..++..|.+|+++++++
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            578999999 9999999999999999999999754

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.73  E-value=0.051  Score=40.40  Aligned_cols=37  Identities=16%  Similarity=0.144  Sum_probs=33.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      ..+.+|+|.|+ |+.|+.++..+...|.+|+++.+.++
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            45689999998 99999999999999999999997654

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.72  E-value=0.09  Score=36.28  Aligned_cols=71  Identities=20%  Similarity=0.190  Sum_probs=47.9

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      +...-..+.+++|.|+ |.+|+-+++.+..+|.+|+++.+.+.-.      +     ...+......+.+.....++++.
T Consensus        23 ~~~~~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~~l------~-----~~~d~~~~~~~~~~l~~~gv~~~   90 (123)
T d1nhpa2          23 QKTVDPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDRPL------G-----VYLDKEFTDVLTEEMEANNITIA   90 (123)
T ss_dssp             HHHTCTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSTT------T-----TTCCHHHHHHHHHHHHTTTEEEE
T ss_pred             HHhhccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCccc------c-----cccchhhHHHHHHHhhcCCeEEE
Confidence            3333355789999998 9999999999999999999998764211      0     01123334455555555567777


Q ss_pred             EeC
Q 020487          213 LDC  215 (325)
Q Consensus       213 i~~  215 (325)
                      .++
T Consensus        91 ~~~   93 (123)
T d1nhpa2          91 TGE   93 (123)
T ss_dssp             ESC
T ss_pred             eCc
Confidence            654

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.72  E-value=0.1  Score=39.75  Aligned_cols=100  Identities=13%  Similarity=0.076  Sum_probs=62.8

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHHH----cCCCEEEeCCCchHHHHHHHHhCCC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      ....++||++||=+|++  .|..+..+++..+ .+|++++.++...+.+++    .+....+..+..... ...  ....
T Consensus        50 ~~l~lkpg~~VLDlGcG--~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~-~~~--~~~~  124 (209)
T d1nt2a_          50 HRLKLRGDERVLYLGAA--SGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPW-KYS--GIVE  124 (209)
T ss_dssp             CCCCCCSSCEEEEETCT--TSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGG-GTT--TTCC
T ss_pred             ccCCCCCCCEEEEeCCc--CCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCcc-ccc--cccc
Confidence            35678999999999973  4677778888775 489999999987766542    332222222221110 000  1112


Q ss_pred             cccEEEeCCC-h----HHHHHhhccccCCCEEEEE
Q 020487          208 GVDVILDCMG-A----SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       208 ~~d~vi~~~g-~----~~~~~~~~~l~~~g~~v~~  237 (325)
                      .+|+++.... .    ..+..+.+.|+|||+++.+
T Consensus       125 ~vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  159 (209)
T d1nt2a_         125 KVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM  159 (209)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEEecccChhhHHHHHHHHHHHhccCCeEEEE
Confidence            4677765442 1    1356777899999999876

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.72  E-value=0.14  Score=38.10  Aligned_cols=87  Identities=15%  Similarity=0.090  Sum_probs=59.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .+.++.|.|. |.+|..++++++..|++|+..++....... ...+.. ..     .+ +++..     ..|+|.-++.-
T Consensus        43 ~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~-~~~~~~-~~-----~l-~ell~-----~sDiv~~~~Pl  108 (184)
T d1ygya1          43 FGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARA-AQLGIE-LL-----SL-DDLLA-----RADFISVHLPK  108 (184)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHH-HHHTCE-EC-----CH-HHHHH-----HCSEEEECCCC
T ss_pred             cceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHH-hhcCce-ec-----cH-HHHHh-----hCCEEEEcCCC
Confidence            4789999998 999999999999999999999876544332 233322 11     11 12221     47888887653


Q ss_pred             -HH----H-HHhhccccCCCEEEEEec
Q 020487          219 -SY----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 -~~----~-~~~~~~l~~~g~~v~~g~  239 (325)
                       +.    + ...++.|+++..+|-++.
T Consensus       109 t~~T~~lin~~~l~~mk~~a~lIN~sR  135 (184)
T d1ygya1         109 TPETAGLIDKEALAKTKPGVIIVNAAR  135 (184)
T ss_dssp             STTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CchhhhhhhHHHHhhhCCCceEEEecc
Confidence             21    2 466788999988887754

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.68  E-value=0.19  Score=38.75  Aligned_cols=100  Identities=15%  Similarity=0.040  Sum_probs=63.0

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHc----CCCEEEeCCCchHHHHHHHHhCCC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDL----GADVCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      +...++||++||=+|++  .|..+..+++.. +.+|++++.++...+.+++.    +....+..+..... ....  ...
T Consensus        68 ~~l~ikpG~~VLDlGcG--sG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~-~~~~--~~~  142 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGAS--AGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ-EYAN--IVE  142 (230)
T ss_dssp             CCCCCCTTCEEEEESCC--SSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG-GGTT--TCC
T ss_pred             HhCCCCCCCEEEEeCEE--cCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCc-cccc--ccc
Confidence            55678999999999983  477777888764 35999999999888777653    22122222222211 1111  112


Q ss_pred             cccEEEeCCCh-----HHHHHhhccccCCCEEEEE
Q 020487          208 GVDVILDCMGA-----SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       208 ~~d~vi~~~g~-----~~~~~~~~~l~~~g~~v~~  237 (325)
                      .+|+++.....     ..+..+...|+|+|.++..
T Consensus       143 ~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~  177 (230)
T d1g8sa_         143 KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eeEEeeccccchHHHHHHHHHHHHhcccCceEEEE
Confidence            45566655432     1256677889999998876

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.65  E-value=0.17  Score=37.91  Aligned_cols=88  Identities=14%  Similarity=0.083  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .|.++.|+|. |.+|..+++.++.+|++|+..++...... ....+....     .++. ++..     ..|+|.-++.-
T Consensus        48 ~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~-~~~~~~~~~-----~~l~-~ll~-----~sD~i~~~~pl  114 (193)
T d1mx3a1          48 RGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGV-ERALGLQRV-----STLQ-DLLF-----HSDCVTLHCGL  114 (193)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTH-HHHHTCEEC-----SSHH-HHHH-----HCSEEEECCCC
T ss_pred             eCceEEEecc-ccccccceeeeeccccceeeccCcccccc-hhhhccccc-----cchh-hccc-----cCCEEEEeecc
Confidence            4789999998 99999999999999999999986644322 222332211     1111 2221     36888776653


Q ss_pred             -HH----H-HHhhccccCCCEEEEEec
Q 020487          219 -SY----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 -~~----~-~~~~~~l~~~g~~v~~g~  239 (325)
                       +.    + ...+..|+++..+|-++.
T Consensus       115 t~~T~~li~~~~l~~mk~~a~lIN~sR  141 (193)
T d1mx3a1         115 NEHNHHLINDFTVKQMRQGAFLVNTAR  141 (193)
T ss_dssp             CTTCTTSBSHHHHTTSCTTEEEEECSC
T ss_pred             cccchhhhhHHHHhccCCCCeEEecCC
Confidence             21    1 455788899988887754

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.60  E-value=0.014  Score=47.35  Aligned_cols=95  Identities=17%  Similarity=0.128  Sum_probs=60.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC------EEEeCCCchHHHHHHHHhC
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD------VCINYKTEDFVARVKEETG  205 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~------~~~~~~~~~~~~~~~~~~~  205 (325)
                      +.+++.+||-+|+  +.|..+..+++. |++|++++.+++-++.+++    .+..      .+.+.+....   -.....
T Consensus        53 ~~~~~~~vLD~Gc--G~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  126 (292)
T d1xvaa_          53 RQHGCHRVLDVAC--GTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTL---DKDVPA  126 (292)
T ss_dssp             HHTTCCEEEESSC--TTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGH---HHHSCC
T ss_pred             hhcCCCEEEEecC--CCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeecccccc---ccccCC
Confidence            3356789999986  457778888775 8999999999987776653    1211      1111111111   112223


Q ss_pred             CCcccEEEeCCCh---------------HHHHHhhccccCCCEEEE
Q 020487          206 GKGVDVILDCMGA---------------SYFQRNLGSLNIDGRLFI  236 (325)
Q Consensus       206 ~~~~d~vi~~~g~---------------~~~~~~~~~l~~~g~~v~  236 (325)
                      ...||.|+.....               ..+..+.+.|+|||.++.
T Consensus       127 ~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         127 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             TTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             CCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            4579998864321               136788899999999886

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.59  E-value=0.13  Score=38.57  Aligned_cols=93  Identities=17%  Similarity=0.130  Sum_probs=60.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE--EEeCCCchHHHHHHHHhCCCccc
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV--CINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      +++| +||-+|+ | .|..+..++++ |++|++++.+++..+.++    ..+.+.  +...+...+       .-...||
T Consensus        29 ~~~g-rvLDiGc-G-~G~~~~~la~~-g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~-------~~~~~fD   97 (198)
T d2i6ga1          29 VAPG-RTLDLGC-G-NGRNSLYLAAN-GYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL-------TFDGEYD   97 (198)
T ss_dssp             SCSC-EEEEETC-T-TSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC-------CCCCCEE
T ss_pred             CCCC-cEEEECC-C-CCHHHHHHHHH-hhhhccccCcHHHHHHHHHHhhhccccchhhhheecccc-------ccccccc
Confidence            4555 8999997 3 78888777764 999999999998777654    344432  221111111       1124699


Q ss_pred             EEEeCCCh---------HHHHHhhccccCCCEEEEEecc
Q 020487          211 VILDCMGA---------SYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       211 ~vi~~~g~---------~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      +|+...--         ..+..+.++|+|+|.++.....
T Consensus        98 ~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~  136 (198)
T d2i6ga1          98 FILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAAM  136 (198)
T ss_dssp             EEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred             EEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence            99864321         1356777889999999887543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.57  E-value=0.032  Score=41.78  Aligned_cols=35  Identities=9%  Similarity=0.023  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEE  175 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~  175 (325)
                      +.+|+|+|| |..|+.++..+.+.|+ .|+++.+++.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            578999999 9999999999999999 5999887655

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.38  E-value=0.13  Score=39.43  Aligned_cols=100  Identities=18%  Similarity=0.194  Sum_probs=64.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHH----HcCCCEEEeCCCchHHHHHHH---HhCC
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKE---ETGG  206 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~---~~~~  206 (325)
                      +....++||-+|  +..|.+++.+|+.+  +.+|+.++.+++..+.++    ..|....+.....+..+.+.+   ....
T Consensus        56 ~~~~~k~vLEiG--t~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l~~~~~~~~~  133 (219)
T d2avda1          56 RLIQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEA  133 (219)
T ss_dssp             HHTTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCT
T ss_pred             HccCCCeEEEEe--chhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehhhcchhhhhhccc
Confidence            335678999999  46788999999887  569999998888766655    345332222222222222322   2233


Q ss_pred             CcccEEEeCCCh----HHHHHhhccccCCCEEEEE
Q 020487          207 KGVDVILDCMGA----SYFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       207 ~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~  237 (325)
                      ..||+||--...    ..+..+++.|++||-++.=
T Consensus       134 ~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~D  168 (219)
T d2avda1         134 GTFDVAVVDADKENCSAYYERCLQLLRPGGILAVL  168 (219)
T ss_dssp             TCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEe
Confidence            469998765443    2367888999999998863

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.36  E-value=0.12  Score=39.88  Aligned_cols=69  Identities=17%  Similarity=0.283  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .|.+|+|.|. |.+|..+++.+...|++|++++.+..+...+. ..|+. .++. ...+         ...+|+++=|.-
T Consensus        38 ~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~-~~~~-~~~~---------~~~cDIl~PcA~  105 (230)
T d1leha1          38 EGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD-AVAP-NAIY---------GVTCDIFAPCAL  105 (230)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE-ECCG-GGTT---------TCCCSEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCc-ccCC-cccc---------cccccEeccccc
Confidence            4889999998 99999999999999999999999888876665 45553 3221 1111         237899998876


Q ss_pred             hH
Q 020487          218 AS  219 (325)
Q Consensus       218 ~~  219 (325)
                      ..
T Consensus       106 ~~  107 (230)
T d1leha1         106 GA  107 (230)
T ss_dssp             SC
T ss_pred             cc
Confidence            53

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.35  E-value=0.086  Score=39.12  Aligned_cols=83  Identities=10%  Similarity=-0.029  Sum_probs=49.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh--hHHHHHHcCCCE----EEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KLAVCKDLGADV----CINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~--~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      +|.|+|+ |.+|.+.+..+...|.+|.+..+..+  ..+...+...+.    .+....-....++.+...  ..|+++-+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~ad~Ii~a   78 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLE--NAEVVLLG   78 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHT--TCSEEEEC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHh--ccchhhcc
Confidence            6889998 99999999999888999999987433  233333211100    000000011222333333  58999999


Q ss_pred             CChHHHHHhhcc
Q 020487          216 MGASYFQRNLGS  227 (325)
Q Consensus       216 ~g~~~~~~~~~~  227 (325)
                      +....+...++.
T Consensus        79 vps~~~~~~~~~   90 (180)
T d1txga2          79 VSTDGVLPVMSR   90 (180)
T ss_dssp             SCGGGHHHHHHH
T ss_pred             cchhhhHHHHHh
Confidence            998765544443

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.34  E-value=0.052  Score=44.15  Aligned_cols=44  Identities=23%  Similarity=0.228  Sum_probs=34.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh--hHHHHHHcC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KLAVCKDLG  184 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~--~~~~~~~~g  184 (325)
                      .+|||+|++|-+|..++..+...|++|+++++...  ....++.+.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~   46 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG   46 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc
Confidence            47999999999999999999888999999987543  234444443

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.34  E-value=0.041  Score=44.18  Aligned_cols=34  Identities=24%  Similarity=0.153  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      +++|+|+|+ |..|++++..++..|.+|++++.++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            578999998 9999999999999999999998653

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=93.19  E-value=0.24  Score=37.85  Aligned_cols=92  Identities=11%  Similarity=0.192  Sum_probs=60.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHH---CCCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHHhCC
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKC---QGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~---~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~~  206 (325)
                      ++++.+||-+|+  +.|..+..+++.   .+++|++++.+++-.+.+++    .+..   .....+...        ...
T Consensus        37 ~~~~~~vLDlGC--GtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~--------~~~  106 (225)
T d1im8a_          37 VTADSNVYDLGC--SRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRH--------VEI  106 (225)
T ss_dssp             CCTTCEEEEESC--TTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTT--------CCC
T ss_pred             cCCCCEEEEecc--chhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhc--------ccc
Confidence            588999999997  457777777764   47899999999998887764    2221   122221111        112


Q ss_pred             CcccEEEeCCCh---------HHHHHhhccccCCCEEEEEe
Q 020487          207 KGVDVILDCMGA---------SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       207 ~~~d~vi~~~g~---------~~~~~~~~~l~~~g~~v~~g  238 (325)
                      ..+|+++-+..-         ..+..+.+.|+|||.++...
T Consensus       107 ~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         107 KNASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             CSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence            356766654321         23678889999999999864

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.17  E-value=0.14  Score=37.70  Aligned_cols=41  Identities=10%  Similarity=0.121  Sum_probs=34.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC  180 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (325)
                      -.+.+++|+|+ |+.+.+++..+...| +|+++.|+.++.+.+
T Consensus        16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l   56 (177)
T d1nvta1          16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEAL   56 (177)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHH
Confidence            35889999998 889998888887666 999999998887654

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=93.14  E-value=0.067  Score=40.02  Aligned_cols=39  Identities=13%  Similarity=0.116  Sum_probs=34.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC  180 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (325)
                      ++|.|+|+ |.+|...+.++...|++|++.+++++..+..
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhh
Confidence            56999998 9999999999999999999999998876544

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.12  E-value=0.044  Score=34.41  Aligned_cols=34  Identities=24%  Similarity=0.342  Sum_probs=30.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      .+|.|+|+ |-+|.+.++.++.+|+++.+.+.++.
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            37899998 99999999999999999999996543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.12  E-value=0.049  Score=41.47  Aligned_cols=68  Identities=12%  Similarity=0.214  Sum_probs=42.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .+|||+||+|-+|..++..+...|.  +|++..+++..        ...-+.....++. .+.+.. ...+|.++.|+|.
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~--------~~~~~~~~~~d~~-~~~~~~-~~~~d~vi~~~g~   72 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------EHPRLDNPVGPLA-ELLPQL-DGSIDTAFCCLGT   72 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------CCTTEECCBSCHH-HHGGGC-CSCCSEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh--------hcccccccccchh-hhhhcc-ccchheeeeeeee
Confidence            6899999999999999998888886  67666654311        1111111222222 222222 2357999999864

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.07  E-value=0.2  Score=39.52  Aligned_cols=95  Identities=16%  Similarity=0.170  Sum_probs=61.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCC-C--EEEeCCCchHHHHHHHHhCCCc
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA-D--VCINYKTEDFVARVKEETGGKG  208 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~-~--~~~~~~~~~~~~~~~~~~~~~~  208 (325)
                      .+++|++||-.++  ++|..++.+|+.-+++|++++.++...+.+++    .+. +  .++..+...       ......
T Consensus       104 ~~~~g~~VlD~~a--G~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~-------~~~~~~  174 (260)
T d2frna1         104 VAKPDELVVDMFA--GIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRD-------FPGENI  174 (260)
T ss_dssp             HCCTTCEEEETTC--TTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTT-------CCCCSC
T ss_pred             hcCCccEEEECcc--eEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHH-------hccCCC
Confidence            3689999999886  45666677777655699999999998877653    232 2  334333322       233446


Q ss_pred             ccEEE-eCCC--hHHHHHhhccccCCCEEEEEec
Q 020487          209 VDVIL-DCMG--ASYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       209 ~d~vi-~~~g--~~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      +|.|+ +...  ...+..+++.+++||.+.....
T Consensus       175 ~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~~  208 (260)
T d2frna1         175 ADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNT  208 (260)
T ss_dssp             EEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred             CCEEEECCCCchHHHHHHHHhhcCCCCEEEEEec
Confidence            88665 3322  2346778888999998765543

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.02  E-value=0.16  Score=37.45  Aligned_cols=97  Identities=14%  Similarity=0.140  Sum_probs=54.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChh--hHHHHHHcCCCEEEeCCCchHH--------HHHHHHhCCCccc
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEE--KLAVCKDLGADVCINYKTEDFV--------ARVKEETGGKGVD  210 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~~~d  210 (325)
                      +|.|.|. |.+|..+++.+... +.+++++.....  ....+...+.............        ..+.+..  .++|
T Consensus         3 KVaINGf-GRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~--~~vD   79 (178)
T d1b7go1           3 NVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI--KTSD   79 (178)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH--HHCS
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhh--hcCC
Confidence            5889996 99999999999876 468888765432  2233333333222111100000        0001111  1589


Q ss_pred             EEEeCCChHH-HHHhhccccCCCEEEEEeccC
Q 020487          211 VILDCMGASY-FQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       211 ~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      +|+||+|... ...+-..++.+-+++..+...
T Consensus        80 iViecTG~f~~~e~a~~hl~~G~KvIi~~~~~  111 (178)
T d1b7go1          80 IVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEK  111 (178)
T ss_dssp             EEEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             EEEECCCCcCCHHHHHHHHHcCCEEEEECCCC
Confidence            9999999743 344445566665677655433

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.82  E-value=0.077  Score=39.21  Aligned_cols=94  Identities=13%  Similarity=-0.044  Sum_probs=57.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCC--CchHHHHHHHHhCCCcccEEEeCCChH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK--TEDFVARVKEETGGKGVDVILDCMGAS  219 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~d~vi~~~g~~  219 (325)
                      +|.++|. |.+|...+.-+...|++|++.+++.++.+.+.+.++.......  .......+.....  ..+.++.++...
T Consensus         3 kIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~   79 (178)
T d1pgja2           3 DVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLK--KPRKALILVQAG   79 (178)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBC--SSCEEEECCCCS
T ss_pred             EEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcc--cceEEEEeecCc
Confidence            4789998 9999999999999999999999999998887665542111000  0011122233322  345555554432


Q ss_pred             -----HHHHhhccccCCCEEEEEe
Q 020487          220 -----YFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       220 -----~~~~~~~~l~~~g~~v~~g  238 (325)
                           .+......+.++..++.+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          80 AATDSTIEQLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEECC
T ss_pred             chhhhhhhhhhhhccccceecccC
Confidence                 1344455666666666654

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.64  E-value=0.27  Score=40.19  Aligned_cols=31  Identities=29%  Similarity=0.304  Sum_probs=28.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEe
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA  171 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~  171 (325)
                      ++|||+|++|-+|..++..+...|.+|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence            5899999999999999999999999999985

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=92.62  E-value=0.34  Score=35.35  Aligned_cols=97  Identities=11%  Similarity=0.126  Sum_probs=57.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCh--hhHHHHHHcCCCEEEeCCCchHH-H--------HHHHHhCCCcc
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSE--EKLAVCKDLGADVCINYKTEDFV-A--------RVKEETGGKGV  209 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~-~--------~~~~~~~~~~~  209 (325)
                      +|.|.|- |.+|..+.+++...+ .+++++....  .....+...+.+........... .        ...+..  .++
T Consensus         3 ~VgINGf-GRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~--~~v   79 (171)
T d1cf2o1           3 AVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDML--DEA   79 (171)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH--HTC
T ss_pred             EEEEEcC-cHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhh--cCC
Confidence            6889997 999999999887765 5777776433  23344445555433221111000 0        011111  268


Q ss_pred             cEEEeCCChHH-HHHhhccccCCCEEEEEeccC
Q 020487          210 DVILDCMGASY-FQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       210 d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      |+|+||+|.-. ...+-..+..|-+.|..+...
T Consensus        80 DvViEcTG~f~~~~~~~~hl~~G~K~vi~~~~~  112 (171)
T d1cf2o1          80 DIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGEK  112 (171)
T ss_dssp             SEEEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             CEEEEccCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            99999999743 344455677777777765443

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=92.46  E-value=0.0055  Score=45.13  Aligned_cols=91  Identities=21%  Similarity=0.204  Sum_probs=58.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHc----CC----CEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDL----GA----DVCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~----g~----~~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      +|.|.|++|.+|.++++.+... +++++.....+.....-+++    +.    ..+.+.....          ...+|++
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~----------~~~~DVi   75 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAV----------KDDFDVF   75 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTT----------TTSCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHH----------hcccceE
Confidence            6899999999999999988776 67877666443221111111    10    0111111111          1268999


Q ss_pred             EeCCChHHHHHhhccccCCCEEEEEeccCC
Q 020487          213 LDCMGASYFQRNLGSLNIDGRLFIIGTQGG  242 (325)
Q Consensus       213 i~~~g~~~~~~~~~~l~~~g~~v~~g~~~~  242 (325)
                      +|.+..+.+...++.....+.=+.+|..+-
T Consensus        76 IDFs~p~~~~~~~~~a~~~~~~~ViGTTG~  105 (162)
T d1diha1          76 IDFTRPEGTLNHLAFCRQHGKGMVIGTTGF  105 (162)
T ss_dssp             EECSCHHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred             EEeccHHHHHHHHHHHHhccceeEEecCCC
Confidence            999998887777777777787777886664

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=92.43  E-value=0.24  Score=39.10  Aligned_cols=95  Identities=9%  Similarity=0.071  Sum_probs=66.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCC-EEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      ..++.+||=+|+  +.|..+..+++.. +.+++.++.++...+.+++...+ .....+....      -.....||+|+.
T Consensus        82 ~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l------~~~~~sfD~v~~  153 (268)
T d1p91a_          82 DDKATAVLDIGC--GEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRL------PFSDTSMDAIIR  153 (268)
T ss_dssp             CTTCCEEEEETC--TTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSC------SBCTTCEEEEEE
T ss_pred             CCCCCEEEEeCC--CCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhhc------cCCCCCEEEEee
Confidence            356788999986  4577777788776 67999999999988888764332 2222222111      012346999997


Q ss_pred             CCChHHHHHhhccccCCCEEEEEec
Q 020487          215 CMGASYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       215 ~~g~~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ......+..+.+.|+|||.++....
T Consensus       154 ~~~~~~~~e~~rvLkpgG~l~~~~p  178 (268)
T d1p91a_         154 IYAPCKAEELARVVKPGGWVITATP  178 (268)
T ss_dssp             ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             cCCHHHHHHHHHHhCCCcEEEEEee
Confidence            7666667888899999999998753

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.17  E-value=0.16  Score=35.45  Aligned_cols=39  Identities=18%  Similarity=0.197  Sum_probs=34.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      .++++.+++|.|+ |.+|+-++..++..|.+|+++.+.+.
T Consensus        31 ~~~~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          31 QLIADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             hhccCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            3467889999998 99999999999999999999997653

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.05  E-value=0.22  Score=40.46  Aligned_cols=98  Identities=19%  Similarity=0.177  Sum_probs=59.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC--EEEeCCCchHHHHHHHHhCCCcccE
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      .+|++||=.++ |. |..++++++ .+.+|+.++.++...+.+++    .|.+  .++..+...+...+.+  .++.||+
T Consensus       144 ~~g~rVLDl~~-gt-G~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~--~~~~fD~  218 (318)
T d1wxxa2         144 FRGERALDVFS-YA-GGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEK--EGERFDL  218 (318)
T ss_dssp             CCEEEEEEETC-TT-THHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHH--TTCCEEE
T ss_pred             hCCCeeeccCC-CC-cHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHh--hhcCCCE
Confidence            46889988876 22 444455554 35699999999998877763    4443  2333333333332222  3457999


Q ss_pred             EEeCCC-----h-----------HHHHHhhccccCCCEEEEEecc
Q 020487          212 ILDCMG-----A-----------SYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       212 vi~~~g-----~-----------~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      |+--.+     .           ..+..+++.|+|||.++.+...
T Consensus       219 Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         219 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             EEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            984221     1           1235667889999999887543

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.99  E-value=0.1  Score=40.31  Aligned_cols=37  Identities=24%  Similarity=0.272  Sum_probs=33.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      +.+++|+|+|+ |..|+.++..++..|.+|+++..+++
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            45789999999 99999999999999999999986654

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=91.74  E-value=1.5  Score=32.38  Aligned_cols=105  Identities=18%  Similarity=0.220  Sum_probs=64.2

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHH----cCCCE-EEeCCCchHHHHHHHHhCC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGADV-CINYKTEDFVARVKEETGG  206 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~----~g~~~-~~~~~~~~~~~~~~~~~~~  206 (325)
                      .....++++.++ ..+ .+.|-.+..+++.. +.+|++++++++..+.+++    ++... .+..+... ...+....+.
T Consensus        17 ~~l~~~~~~~~l-D~t-~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~-~~~~~~~~~~   93 (192)
T d1m6ya2          17 EFLKPEDEKIIL-DCT-VGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYRE-ADFLLKTLGI   93 (192)
T ss_dssp             HHHCCCTTCEEE-ETT-CTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGG-HHHHHHHTTC
T ss_pred             HhhCCCCCCEEE-Eec-CCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHhh-HHHHHHHcCC
Confidence            334567888663 433 44455555666655 6799999999998887764    34332 33333333 3444455555


Q ss_pred             CcccEEEeCCCh----------------HHHHHhhccccCCCEEEEEecc
Q 020487          207 KGVDVILDCMGA----------------SYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       207 ~~~d~vi~~~g~----------------~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      ..+|.|+--.|-                ..+..+.+.|+++|+++.+..+
T Consensus        94 ~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f~  143 (192)
T d1m6ya2          94 EKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISFH  143 (192)
T ss_dssp             SCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred             CCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeeccc
Confidence            678877533331                1245677888999998877543

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.74  E-value=0.12  Score=36.98  Aligned_cols=40  Identities=10%  Similarity=0.061  Sum_probs=32.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD  182 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~  182 (325)
                      +|.|+|. |.+|...+.-+...|.+|++..+...+....+.
T Consensus         2 kIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~   41 (152)
T d1i36a2           2 RVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIERA   41 (152)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHH
T ss_pred             EEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhh
Confidence            5889998 999999999999999999988866665554443

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.71  E-value=0.13  Score=39.91  Aligned_cols=35  Identities=20%  Similarity=0.213  Sum_probs=31.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      +.-.+|+|+|+ |..|++++..+...|.+|+++++.
T Consensus         4 ~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            34468999999 999999999999999999999964

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=91.67  E-value=0.8  Score=29.20  Aligned_cols=66  Identities=17%  Similarity=0.237  Sum_probs=45.0

Q ss_pred             CEEEEEcCCchHHH-HHHHHHHHCCCEEEEEecChh-hHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          141 ESFLVHGGSSGIGT-FAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       141 ~~vli~g~~g~~G~-~~~~~a~~~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      .+|-++|- |++|- +++++++..|+.|...+..+. ..+.+++.|......++...+          .+.|+|+-+.+
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~i----------~~~d~vV~SsA   69 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSADNW----------YDPDLVIKTPA   69 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCTTSC----------CCCSEEEECTT
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeeccccc----------CCCCEEEEecC
Confidence            35667787 66775 457899999999999997764 446677889765443333322          25788776654

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.63  E-value=0.1  Score=42.30  Aligned_cols=37  Identities=24%  Similarity=0.167  Sum_probs=32.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      .....+|+|+|+ |..|++++..+...|.+|++++.++
T Consensus        27 ~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            355678999998 9999999999999999999999654

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.56  E-value=0.63  Score=37.69  Aligned_cols=101  Identities=15%  Similarity=0.143  Sum_probs=66.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-CCC-EEEEEecChhhHHHH----HHcCCCEEEeCCCchHHHHHHHHhCCCcccE
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKC-QGV-RVFVTAGSEEKLAVC----KDLGADVCINYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~-~g~-~v~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      +...++.|+|+ |..+...++.+.. ... +|.+..++.++.+.+    +..+.....+.     .+.    .  .+.|+
T Consensus       123 ~~~~~l~iiGa-G~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~-----~~a----~--~~aDi  190 (320)
T d1omoa_         123 KNSSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQP-----AEE----A--SRCDV  190 (320)
T ss_dssp             TTCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECC-----HHH----H--TSSSE
T ss_pred             CCccEEEEecC-cccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccch-----hhh----h--ccccE
Confidence            45578999998 9888777776654 455 899999998877544    34554433321     111    1  26899


Q ss_pred             EEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchH
Q 020487          212 ILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNIT  250 (325)
Q Consensus       212 vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~  250 (325)
                      |+.|+.+..----.+++++|-.+..+|........++..
T Consensus       191 V~taT~s~~P~~~~~~l~~G~hv~~iGs~~p~~~Eld~~  229 (320)
T d1omoa_         191 LVTTTPSRKPVVKAEWVEEGTHINAIGADGPGKQELDVE  229 (320)
T ss_dssp             EEECCCCSSCCBCGGGCCTTCEEEECSCCSTTCCCBCHH
T ss_pred             EEEeccCcccccchhhcCCCCeEeecCCccccccccCHH
Confidence            999887543111136799999999998766544445544

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.52  E-value=0.11  Score=35.18  Aligned_cols=34  Identities=26%  Similarity=0.219  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      .++++|.|+ |.+|.-+++.++.+|.+|+++.+.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            378999998 9999999999999999999998664

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=91.49  E-value=0.92  Score=32.40  Aligned_cols=93  Identities=19%  Similarity=0.192  Sum_probs=56.3

Q ss_pred             CEEEEEcCCchHHH-HHHHHHHHCC-CEEEEEec-Chh--hHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          141 ESFLVHGGSSGIGT-FAIQMGKCQG-VRVFVTAG-SEE--KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       141 ~~vli~g~~g~~G~-~~~~~a~~~g-~~v~~~~~-~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      -++.|+|+ |.+|. ...++++... .++++++. +.+  ...+.++++......     ..+.+.+.....++|+||.+
T Consensus         5 irvaIIGa-G~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~-----~~d~l~~~~~~~~iDiVf~A   78 (157)
T d1nvmb1           5 LKVAIIGS-GNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYA-----GVEGLIKLPEFADIDFVFDA   78 (157)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESS-----HHHHHHHSGGGGGEEEEEEC
T ss_pred             cEEEEEcC-cHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccccc-----ceeeeeecccccccCEEEEc
Confidence            46899995 88986 5677887774 47877763 333  345566777654321     12233332222369999999


Q ss_pred             CChH-HHHH--hhccccCCCEEEEEec
Q 020487          216 MGAS-YFQR--NLGSLNIDGRLFIIGT  239 (325)
Q Consensus       216 ~g~~-~~~~--~~~~l~~~g~~v~~g~  239 (325)
                      +... +...  ..+.++.|-.+++...
T Consensus        79 Tpag~h~~~~~~~~aa~~G~~VID~s~  105 (157)
T d1nvmb1          79 TSASAHVQNEALLRQAKPGIRLIDLTP  105 (157)
T ss_dssp             SCHHHHHHHHHHHHHHCTTCEEEECST
T ss_pred             CCchhHHHhHHHHHHHHcCCEEEEccc
Confidence            8753 3333  3445666667777644

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=91.48  E-value=0.18  Score=37.36  Aligned_cols=91  Identities=13%  Similarity=0.100  Sum_probs=55.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhh---HHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEK---LAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~---~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      =+|.|+|++|-+|.-+++++..+- .++..+..+...   ..... .+......  .......     ....+.|++|-|
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~--~~~~~~~-----~~~~~~Dvvf~a   78 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLP--NLVAVKD-----ADFSNVDAVFCC   78 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCC--CCBCGGG-----CCGGGCSEEEEC
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccc--cchhhhh-----hhhcccceeeec
Confidence            368999999999999999999884 577666533221   11111 11111000  0000000     001268999999


Q ss_pred             CChHHHHHhhccccCCCEEEEEe
Q 020487          216 MGASYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       216 ~g~~~~~~~~~~l~~~g~~v~~g  238 (325)
                      .+..........+...+..+...
T Consensus        79 lp~~~s~~~~~~l~~~~~~v~~~  101 (183)
T d2cvoa1          79 LPHGTTQEIIKGLPQELKIVDLS  101 (183)
T ss_dssp             CSSSHHHHHHHTSCSSCEEEECS
T ss_pred             cccchHHHHHHHHHhcCcccccc
Confidence            99877766677788888887654

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.39  E-value=0.086  Score=41.13  Aligned_cols=89  Identities=15%  Similarity=0.172  Sum_probs=58.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC-EEEeCCCchHHHHHHHHhCCCcccEE
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVKEETGGKGVDVI  212 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~v  212 (325)
                      .++.+||=+|+.  .|..+..+++. |.+|+.++.+++..+.+++    .+.. .++..+...       ..-.+.||+|
T Consensus        36 ~~~~~vLDiGCG--~G~~~~~l~~~-g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~-------~~~~~~fD~i  105 (246)
T d1y8ca_          36 LVFDDYLDLACG--TGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISN-------LNINRKFDLI  105 (246)
T ss_dssp             CCTTEEEEETCT--TSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGG-------CCCSCCEEEE
T ss_pred             CCCCeEEEEeCc--CCHHHHHHHHh-CCccEeeccchhhhhhccccccccCccceeeccchhh-------hccccccccc
Confidence            345789999972  46666666664 8899999999987776653    3332 233222211       1123479999


Q ss_pred             EeCCCh-----------HHHHHhhccccCCCEEEE
Q 020487          213 LDCMGA-----------SYFQRNLGSLNIDGRLFI  236 (325)
Q Consensus       213 i~~~g~-----------~~~~~~~~~l~~~g~~v~  236 (325)
                      +...+.           ..+..+.+.|+|||.++.
T Consensus       106 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         106 TCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             ceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            864332           135677889999999885

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.24  E-value=0.11  Score=42.51  Aligned_cols=33  Identities=15%  Similarity=0.183  Sum_probs=29.8

Q ss_pred             EE-EEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          142 SF-LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       142 ~v-li~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      +| ||+|++|-+|..++..+...|++|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            57 9999999999999999998999999999754

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.19  E-value=0.66  Score=36.16  Aligned_cols=34  Identities=15%  Similarity=0.132  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      .|.+++|.|. |.+|..+++.+...|++|+++..+
T Consensus        35 ~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD~   68 (255)
T d1bgva1          35 VGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSGP   68 (255)
T ss_dssp             TTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEET
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            5789999997 999999999999999999998753

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.11  E-value=0.2  Score=38.16  Aligned_cols=96  Identities=17%  Similarity=0.197  Sum_probs=59.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHH----HcCCC---EEEeCCCchHHHHHHHHhCCCc
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGAD---VCINYKTEDFVARVKEETGGKG  208 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~----~~g~~---~~~~~~~~~~~~~~~~~~~~~~  208 (325)
                      .+..+||-+|.  ..|..++.+|+.+  +.+|+.++.+++..+.++    ..|..   .++..+.......+.+......
T Consensus        55 ~kpk~ILEiGt--~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e~l~~l~~~~~~~~  132 (214)
T d2cl5a1          55 YSPSLVLELGA--YCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDT  132 (214)
T ss_dssp             HCCSEEEEECC--TTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGHHHHSCCCC
T ss_pred             hCCCEEEEEcc--CchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeeccccccccchhhcccccc
Confidence            45578999995  5688888888876  579999999888766554    34532   2233222222233444444457


Q ss_pred             ccEEEeCCC-hH-----HHHHhhccccCCCEEE
Q 020487          209 VDVILDCMG-AS-----YFQRNLGSLNIDGRLF  235 (325)
Q Consensus       209 ~d~vi~~~g-~~-----~~~~~~~~l~~~g~~v  235 (325)
                      +|+++--.. ..     .+...++.|+|||.++
T Consensus       133 ~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv  165 (214)
T d2cl5a1         133 LDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLL  165 (214)
T ss_dssp             EEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEE
T ss_pred             cceeeecccccccccHHHHHHHhCccCCCcEEE
Confidence            998764332 22     1345567899998655

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=91.08  E-value=0.58  Score=32.06  Aligned_cols=91  Identities=15%  Similarity=0.153  Sum_probs=61.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH-
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-  220 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-  220 (325)
                      .++|.|. |.+|..+++.++  +.+++++..++++.+.++..|.. ++..+..+ . ...+..+-..++.++-+...+. 
T Consensus         2 HivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~~~~-~i~Gd~~~-~-~~L~~a~i~~A~~vi~~~~~d~~   75 (129)
T d2fy8a1           2 HVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVLRSGAN-FVHGDPTR-V-SDLEKANVRGARAVIVNLESDSE   75 (129)
T ss_dssp             CEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHTTCE-EEESCTTS-H-HHHHHTTCTTCSEEEECCSSHHH
T ss_pred             EEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhcCcc-ccccccCC-H-HHHHHhhhhcCcEEEEeccchhh
Confidence            3788897 999998887765  45678888888888888877764 44344333 2 3344455557889998887653 


Q ss_pred             ---HHHhhccccCCCEEEEEe
Q 020487          221 ---FQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       221 ---~~~~~~~l~~~g~~v~~g  238 (325)
                         +....+.+.|..+++...
T Consensus        76 n~~~~~~~r~~~~~~~iia~~   96 (129)
T d2fy8a1          76 TIHCILGIRKIDESVRIIAEA   96 (129)
T ss_dssp             HHHHHHHHHHHCSSSCEEEEC
T ss_pred             hHHHHHHHHHHCCCceEEEEE
Confidence               234456677887777653

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=91.06  E-value=0.082  Score=43.97  Aligned_cols=30  Identities=20%  Similarity=0.248  Sum_probs=25.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEe
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTA  171 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~  171 (325)
                      +|||+|++|-+|..++..+...|.++++..
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~   31 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNI   31 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            699999999999999999988898755544

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=91.00  E-value=0.08  Score=42.23  Aligned_cols=62  Identities=16%  Similarity=0.215  Sum_probs=37.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +|||+|++|-+|..++..+...|. ++.+.+....      +    ..|-.+.   ..+.+...+.++|+||.|++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~------~----~~Dl~~~---~~~~~~i~~~~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE------F----CGDFSNP---KGVAETVRKLRPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS------S----CCCTTCH---HHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc------c----cCcCCCH---HHHHHHHHHcCCCEEEEecc
Confidence            699999999999999988877664 5555433221      1    1122222   22223222225799999886

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.98  E-value=0.19  Score=35.63  Aligned_cols=36  Identities=22%  Similarity=0.182  Sum_probs=29.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEK  176 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~  176 (325)
                      .+|.|+||+|.+|..++..+...+.  +++.++.++.+
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~   38 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP   38 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccc
Confidence            3689999889999999999988875  68888766543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.96  E-value=0.14  Score=41.38  Aligned_cols=32  Identities=22%  Similarity=0.324  Sum_probs=29.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG  172 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~  172 (325)
                      .+|||+|++|-+|..++..+...|.+|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            57999999999999999999889999999874

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=90.94  E-value=0.033  Score=43.90  Aligned_cols=94  Identities=14%  Similarity=0.049  Sum_probs=59.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC-EE--EeCCCchHHHHHHHHhCCCcc
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VC--INYKTEDFVARVKEETGGKGV  209 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~-~~--~~~~~~~~~~~~~~~~~~~~~  209 (325)
                      ++++++||=+|+ | .|..+..+++.-..+|++++.+++..+.+++    .+.. .+  +..+....     ....++.|
T Consensus        22 ~~~~~~VLDlGC-G-~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~-----~~~~~~~f   94 (252)
T d1ri5a_          22 TKRGDSVLDLGC-G-KGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR-----HMDLGKEF   94 (252)
T ss_dssp             CCTTCEEEEETC-T-TTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS-----CCCCSSCE
T ss_pred             CCCcCEEEEecc-c-CcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhh-----cccccccc
Confidence            578999999997 3 3666677777644589999999998877753    2321 22  11111000     00123469


Q ss_pred             cEEEeCCChH-----------HHHHhhccccCCCEEEEE
Q 020487          210 DVILDCMGAS-----------YFQRNLGSLNIDGRLFII  237 (325)
Q Consensus       210 d~vi~~~g~~-----------~~~~~~~~l~~~g~~v~~  237 (325)
                      |+|+......           .+..+.+.|+|||.++..
T Consensus        95 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          95 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             eEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            9998654321           245667889999998864

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=90.78  E-value=1.6  Score=31.53  Aligned_cols=96  Identities=17%  Similarity=0.255  Sum_probs=55.3

Q ss_pred             CCCCCCEEEEEcC-CchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCC-CEEEeCCCchHHHHHHHHhCCCcc
Q 020487          136 HLSPGESFLVHGG-SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA-DVCINYKTEDFVARVKEETGGKGV  209 (325)
Q Consensus       136 ~~~~~~~vli~g~-~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~-~~~~~~~~~~~~~~~~~~~~~~~~  209 (325)
                      .+.+|.+||=.++ +|.+|   +..+ ..|++|+.++.+++..+.++    ..+. +.+...+.+.+...  ....+..|
T Consensus        38 ~~~~g~~vLDl~~G~G~~~---i~a~-~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~~~~~--~~~~~~~f  111 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGSGAVG---LEAA-SEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPE--AKAQGERF  111 (171)
T ss_dssp             HCTTCCEEEEETCSSCHHH---HHHH-HTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHH--HHHTTCCE
T ss_pred             cccCCCeEEEeccccchhh---hhhh-hccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhccccc--ccccCCcc
Confidence            4567888887765 44444   3433 35899999999988777664    3444 34544443333222  12334579


Q ss_pred             cEEEeCC----Ch-HHHHHhh--ccccCCCEEEEE
Q 020487          210 DVILDCM----GA-SYFQRNL--GSLNIDGRLFII  237 (325)
Q Consensus       210 d~vi~~~----g~-~~~~~~~--~~l~~~g~~v~~  237 (325)
                      |+||---    +. ..+..++  ..++++|.++.-
T Consensus       112 D~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivie  146 (171)
T d1ws6a1         112 TVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQ  146 (171)
T ss_dssp             EEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred             ceeEEccccccCHHHHHHHHHHcCCcCCCeEEEEE
Confidence            9997432    21 2233332  467888877753

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.58  E-value=0.16  Score=41.21  Aligned_cols=36  Identities=14%  Similarity=0.151  Sum_probs=31.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      ++..+|+|+|| |..|++++..+...|.+|+++..++
T Consensus         3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            44567999998 9999999999999999999998654

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=90.57  E-value=0.79  Score=29.68  Aligned_cols=70  Identities=14%  Similarity=0.165  Sum_probs=46.4

Q ss_pred             CCCCCEEEEEcCCchHHHHH-HHHHHHCCCEEEEEecChh-hHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487          137 LSPGESFLVHGGSSGIGTFA-IQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~-~~~a~~~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      .+...++.++|- |++|..+ +++++..|++|...+.... ..+.+++.|......++....          .+.|+++-
T Consensus         5 ~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~i----------~~~d~vV~   73 (96)
T d1p3da1           5 MRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHI----------EGASVVVV   73 (96)
T ss_dssp             CTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGGGG----------TTCSEEEE
T ss_pred             chhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCccccC----------CCCCEEEE
Confidence            455678989988 7777544 8999999999999997643 345566778753332322221          24677776


Q ss_pred             CCC
Q 020487          215 CMG  217 (325)
Q Consensus       215 ~~g  217 (325)
                      +.+
T Consensus        74 S~A   76 (96)
T d1p3da1          74 SSA   76 (96)
T ss_dssp             CTT
T ss_pred             CCC
Confidence            554

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=90.45  E-value=0.23  Score=33.65  Aligned_cols=63  Identities=14%  Similarity=0.104  Sum_probs=40.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC---CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQ---GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~---g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      .++++|.|+ |.+|.-+++++..+   |.+|+++.+.+.            ++...+......+.+.+...++++..++
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~------------il~~~d~~~~~~~~~~l~~~GI~v~~~~   83 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM------------ILRGFDSELRKQLTEQLRANGINVRTHE   83 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS------------SSTTSCHHHHHHHHHHHHHTTEEEEETC
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc------------ccccccchhhHHHHHHHhhCcEEEEcCC
Confidence            478999998 99999888775544   789999986642            1212223334444444444566666644

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.44  E-value=0.17  Score=41.45  Aligned_cols=33  Identities=15%  Similarity=0.100  Sum_probs=30.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG  172 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~  172 (325)
                      -.++||+|++|-+|..++..+...|.+|+++++
T Consensus        16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            467999999999999999999999999999975

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=90.39  E-value=0.26  Score=34.98  Aligned_cols=90  Identities=17%  Similarity=0.134  Sum_probs=49.6

Q ss_pred             EEEEEcCCchHHHHHHHH-HHHCC---CEEEEEecChhhHHHHHHcCC-CEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          142 SFLVHGGSSGIGTFAIQM-GKCQG---VRVFVTAGSEEKLAVCKDLGA-DVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~-a~~~g---~~v~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      +|.|+||+|-+|.-.+++ +.+..   .+++....+..........+. ....+..+.   ..   .   .++|++|-|.
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~---~~---~---~~~DivF~a~   73 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDL---EA---L---KALDIIVTCQ   73 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCH---HH---H---HTCSEEEECS
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccch---hh---h---hcCcEEEEec
Confidence            689999999999999974 54432   366666544322111111111 111111111   11   1   2689999999


Q ss_pred             ChHHHHHhhccccCCC---EEEEEecc
Q 020487          217 GASYFQRNLGSLNIDG---RLFIIGTQ  240 (325)
Q Consensus       217 g~~~~~~~~~~l~~~g---~~v~~g~~  240 (325)
                      +..........+...|   .+++.+..
T Consensus        74 ~~~~s~~~~~~~~~~g~~~~VID~Ss~  100 (146)
T d1t4ba1          74 GGDYTNEIYPKLRESGWQGYWIDAASS  100 (146)
T ss_dssp             CHHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred             CchHHHHhhHHHHhcCCCeecccCCcc
Confidence            9887655555543433   46665443

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.22  E-value=0.17  Score=36.13  Aligned_cols=33  Identities=15%  Similarity=0.249  Sum_probs=29.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG  172 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~  172 (325)
                      .|.++||.|+ |.+|..-+..+...|++|+++..
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            4899999999 99999999999999999999963

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=90.08  E-value=0.19  Score=40.81  Aligned_cols=35  Identities=14%  Similarity=0.173  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      ..+|+|+|| |..|+.++..+...|.+|.++..++.
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            568999998 99999999999999999999996643

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.03  E-value=0.56  Score=37.77  Aligned_cols=97  Identities=21%  Similarity=0.221  Sum_probs=55.1

Q ss_pred             HHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHH---HHcCC-C--EEEeCCCchHHHHHHH
Q 020487          130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC---KDLGA-D--VCINYKTEDFVARVKE  202 (325)
Q Consensus       130 ~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~---~~~g~-~--~~~~~~~~~~~~~~~~  202 (325)
                      |+.+...+.++++||-+|+ | .|..++.+|+. |+ +|++++.++......   ++.+. +  .++..+....      
T Consensus        26 ai~~~~~~~~~~~VLDiGc-G-~G~lsl~aa~~-Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l------   96 (311)
T d2fyta1          26 FIYQNPHIFKDKVVLDVGC-G-TGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEV------   96 (311)
T ss_dssp             HHHHCGGGTTTCEEEEETC-T-TSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS------
T ss_pred             HHHhccccCCcCEEEEECC-C-CCHHHHHHHHc-CCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHh------
Confidence            3444445678999999997 3 56666666654 76 899999887643222   22332 1  2333332221      


Q ss_pred             HhCCCcccEEEeCC-Ch----H----HH-HHhhccccCCCEEE
Q 020487          203 ETGGKGVDVILDCM-GA----S----YF-QRNLGSLNIDGRLF  235 (325)
Q Consensus       203 ~~~~~~~d~vi~~~-g~----~----~~-~~~~~~l~~~g~~v  235 (325)
                      ......+|+|+... +.    +    .+ ...-+.|+|+|+++
T Consensus        97 ~~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1          97 HLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             CCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             cCccccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            01234799998532 21    1    22 22235789999886

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.88  E-value=0.29  Score=37.29  Aligned_cols=96  Identities=21%  Similarity=0.162  Sum_probs=63.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcC----CC--EEEeCCCchHHHHHHHHhCCCcc
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG----AD--VCINYKTEDFVARVKEETGGKGV  209 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g----~~--~~~~~~~~~~~~~~~~~~~~~~~  209 (325)
                      ...++.+||-+|+  +.|..+..+++..+.+|++++.+++-.+.+++..    ..  ..+..+...+      ......|
T Consensus        57 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~------~~~~~~f  128 (222)
T d2ex4a1          57 NKTGTSCALDCGA--GIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDF------TPEPDSY  128 (222)
T ss_dssp             -CCCCSEEEEETC--TTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGC------CCCSSCE
T ss_pred             CCCCCCEEEEecc--CCCHhhHHHHHhcCCEEEEeecCHHHhhcccccccccccccccccccccccc------ccccccc
Confidence            4567789999996  5688888887777779999999999888877532    21  2222222211      0123478


Q ss_pred             cEEEeCC-----ChH----HHHHhhccccCCCEEEEEec
Q 020487          210 DVILDCM-----GAS----YFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       210 d~vi~~~-----g~~----~~~~~~~~l~~~g~~v~~g~  239 (325)
                      |+|+...     ..+    .+..+.+.|+|+|.++....
T Consensus       129 D~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~  167 (222)
T d2ex4a1         129 DVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN  167 (222)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccccccccchhhhhhhHHHHHHHhcCCcceEEEEEc
Confidence            9998643     332    35667788999999988743

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=89.76  E-value=0.31  Score=33.12  Aligned_cols=38  Identities=18%  Similarity=0.202  Sum_probs=28.1

Q ss_pred             CCEEEEEcCCchH-----------HHHHHHHHHHCCCEEEEEecChhhHH
Q 020487          140 GESFLVHGGSSGI-----------GTFAIQMGKCQGVRVFVTAGSEEKLA  178 (325)
Q Consensus       140 ~~~vli~g~~g~~-----------G~~~~~~a~~~g~~v~~~~~~~~~~~  178 (325)
                      .++|||+|+ |+.           +..++..++..|++++.+..+++...
T Consensus         4 ~kkvlViGs-Gp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVs   52 (121)
T d1a9xa4           4 REKIMVLGG-GPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVS   52 (121)
T ss_dssp             SCEEEEECC-CSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSST
T ss_pred             CCEEEEECC-CcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhh
Confidence            468999997 543           45556666777999999998877554

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=89.76  E-value=0.23  Score=33.67  Aligned_cols=65  Identities=12%  Similarity=0.107  Sum_probs=43.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC---CEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQG---VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g---~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      +..++++|.|+ |.+|.-++..++.++   .+|+++.+.+.            ++...+....+.+.+.+...++++..+
T Consensus        18 ~~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~------------iL~~~d~~~~~~l~~~l~~~GV~v~~~   84 (117)
T d1aoga2          18 EPPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM------------ILRGFDHTLREELTKQLTANGIQILTK   84 (117)
T ss_dssp             SCCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS------------SSTTSCHHHHHHHHHHHHHTTCEEEES
T ss_pred             hcCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch------------hhcccchHHHHHHHHHHHhcCcEEEcC
Confidence            34578999998 999998887777664   47999886532            222223344555555555567777775


Q ss_pred             C
Q 020487          215 C  215 (325)
Q Consensus       215 ~  215 (325)
                      +
T Consensus        85 ~   85 (117)
T d1aoga2          85 E   85 (117)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.72  E-value=0.19  Score=39.50  Aligned_cols=33  Identities=21%  Similarity=0.207  Sum_probs=29.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChh
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEE  175 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~  175 (325)
                      .|+|+|| |..|++++..+++.|. +|.++.++++
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            5899999 9999999999999997 8888886643

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.69  E-value=0.25  Score=33.77  Aligned_cols=36  Identities=17%  Similarity=0.068  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      +.+.+++|.|+ |.+|+-+++.+...|.+|+++.+.+
T Consensus        30 ~~~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          30 ENSGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HHHSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hcCCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            34578999998 9999999999999999999998764

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.44  E-value=0.13  Score=40.91  Aligned_cols=33  Identities=12%  Similarity=0.124  Sum_probs=29.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      .|+|.|+ |..|++++..+++.|.+|.++++.+.
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4899999 99999999999999999999997653

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=89.39  E-value=0.43  Score=38.25  Aligned_cols=32  Identities=13%  Similarity=0.128  Sum_probs=28.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG  172 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~  172 (325)
                      .+|||+|++|-+|..++..+...|..++++..
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~   34 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRT   34 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecC
Confidence            47999999999999999999999998877653

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=89.14  E-value=0.4  Score=32.91  Aligned_cols=78  Identities=21%  Similarity=0.215  Sum_probs=46.4

Q ss_pred             CCCEEEEEcCCchH-----------HHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGI-----------GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~-----------G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      .-++|||+|+ |+.           +..++..++..|++++.+..+++....-.+. +++++-  .....+.+.+....+
T Consensus         6 ~~kkvlilGs-Gp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~-aD~lYf--ePlt~e~v~~Ii~~E   81 (127)
T d1a9xa3           6 DIKSILILGA-GPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM-ADATYI--EPIHWEVVRKIIEKE   81 (127)
T ss_dssp             SCCEEEEECC-CSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG-SSEEEC--SCCCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh-cceeee--ecCCHHHHHHHHHHh
Confidence            3478999997 543           3445555567799999999888765433232 334331  222233344433334


Q ss_pred             cccEEEeCCChHH
Q 020487          208 GVDVILDCMGASY  220 (325)
Q Consensus       208 ~~d~vi~~~g~~~  220 (325)
                      ..|.++-+.|+..
T Consensus        82 ~pd~il~~~GGQt   94 (127)
T d1a9xa3          82 RPDAVLPTMGGQT   94 (127)
T ss_dssp             CCSEEECSSSHHH
T ss_pred             CcCCeEEEeeeeh
Confidence            6777887777754

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.02  E-value=0.17  Score=39.38  Aligned_cols=32  Identities=16%  Similarity=0.242  Sum_probs=28.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCh
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSE  174 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~  174 (325)
                      +|+|+|| |..|++++..+++.|. +|+++.+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            4899998 9999999999999997 699998654

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=88.92  E-value=4.5  Score=32.13  Aligned_cols=100  Identities=16%  Similarity=0.134  Sum_probs=56.5

Q ss_pred             CCCCCCEEEEEcC-CchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH------cCCC--EEEeCCCchHHHHHHHHhCC
Q 020487          136 HLSPGESFLVHGG-SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD------LGAD--VCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       136 ~~~~~~~vli~g~-~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~------~g~~--~~~~~~~~~~~~~~~~~~~~  206 (325)
                      ...++.+||=+.+ +|.++   +++++ .|++|+.++.++...+.+++      +...  .++..+...+.....  ..+
T Consensus       129 ~~~~~~rVLdlf~~tG~~s---l~aa~-~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~~l~~~~--~~~  202 (309)
T d2igta1         129 TADRPLKVLNLFGYTGVAS---LVAAA-AGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREE--RRG  202 (309)
T ss_dssp             HSSSCCEEEEETCTTCHHH---HHHHH-TTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHH--HHT
T ss_pred             hccCCCeEEEecCCCcHHH---HHHHh-CCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHHhHHHHh--hcC
Confidence            3466888987765 44444   44443 58999999999998877763      2221  223222222222222  224


Q ss_pred             CcccEEEeCC--------Ch-----HH----HHHhhccccCCCEEEEEeccC
Q 020487          207 KGVDVILDCM--------GA-----SY----FQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       207 ~~~d~vi~~~--------g~-----~~----~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      +.||+||---        +.     ..    +..+...+.++|.++++..+.
T Consensus       203 ~~fD~IilDPP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~g~~ll~t~~s  254 (309)
T d2igta1         203 STYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS  254 (309)
T ss_dssp             CCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred             CCCCEEEECCCcccccccchhHHHHHHHHHHHHHHHHhcCCCCCEEEEecCC
Confidence            5799997411        10     11    234556788998876665444

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.78  E-value=0.095  Score=41.04  Aligned_cols=45  Identities=4%  Similarity=-0.004  Sum_probs=31.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD  182 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~  182 (325)
                      ...+|.+||=+|+ | .|.....++...+.+|+.++.++...+.+++
T Consensus        48 ~~~~g~~vLDlGc-G-~G~~~~~~~~~~~~~v~giD~S~~~i~~a~~   92 (257)
T d2a14a1          48 GGLQGDTLIDIGS-G-PTIYQVLAACDSFQDITLSDFTDRNREELEK   92 (257)
T ss_dssp             TSCCEEEEEESSC-T-TCCGGGTTGGGTEEEEEEEESCHHHHHHHHH
T ss_pred             cCCCCCEEEEECC-C-CCHhHHHHhccccCcEEEecCCHHHHHHHHH
Confidence            3467889999987 3 3544444455544489999999998887764

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=88.71  E-value=1.7  Score=35.74  Aligned_cols=32  Identities=22%  Similarity=0.314  Sum_probs=26.5

Q ss_pred             CCEEEEEcCCchHHHHHHH-HHHHCCCEEEEEe
Q 020487          140 GESFLVHGGSSGIGTFAIQ-MGKCQGVRVFVTA  171 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~-~a~~~g~~v~~~~  171 (325)
                      +.+|||+|++|-+|..++. +++..|.+|++++
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D   34 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD   34 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence            4689999999999977665 5567799999986

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=88.65  E-value=0.16  Score=40.22  Aligned_cols=32  Identities=19%  Similarity=0.212  Sum_probs=29.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      +|+|+|+ |..|+.++..+...|.+|++++.++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            5899998 9999999999999999999998653

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=88.60  E-value=0.24  Score=37.22  Aligned_cols=84  Identities=15%  Similarity=0.052  Sum_probs=55.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh-
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-  218 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-  218 (325)
                      |.++.|+|. |.+|..+++.++.+|++|++.++...+..    ......     .+ .+.+..     ..|++.-++.. 
T Consensus        45 ~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~----~~~~~~-----~~-l~~l~~-----~~D~v~~~~plt  108 (199)
T d1dxya1          45 QQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGD----HPDFDY-----VS-LEDLFK-----QSDVIDLHVPGI  108 (199)
T ss_dssp             GSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSC----CTTCEE-----CC-HHHHHH-----HCSEEEECCCCC
T ss_pred             ceeeeeeec-ccccccccccccccceeeeccCCccchhh----hcchhH-----HH-HHHHHH-----hcccceeeeccc
Confidence            679999998 99999999999999999999987543211    000011     11 122222     36888776652 


Q ss_pred             HH----H-HHhhccccCCCEEEEEec
Q 020487          219 SY----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 ~~----~-~~~~~~l~~~g~~v~~g~  239 (325)
                      +.    + ...++.|+++..+|-++.
T Consensus       109 ~~T~~li~~~~l~~mk~~a~lIN~aR  134 (199)
T d1dxya1         109 EQNTHIINEAAFNLMKPGAIVINTAR  134 (199)
T ss_dssp             GGGTTSBCHHHHHHSCTTEEEEECSC
T ss_pred             ccccccccHHHhhccCCceEEEeccc
Confidence            22    1 455678888888887754

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=88.49  E-value=2  Score=32.04  Aligned_cols=95  Identities=11%  Similarity=0.097  Sum_probs=62.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHH----HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      +..||=+|+  +.|..++.+|+.. +.++++++.+......+.    +.+.+.+.-...+.  ..+.+......+|.|+-
T Consensus        30 ~PlvLeIGc--G~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da--~~l~~~~~~~~~d~v~i  105 (204)
T d2fcaa1          30 NPIHIEVGT--GKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDA--DTLTDVFEPGEVKRVYL  105 (204)
T ss_dssp             CCEEEEECC--TTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCG--GGHHHHCCTTSCCEEEE
T ss_pred             CceEEEEEe--cCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccch--hhhhcccCchhhhcccc
Confidence            456777785  5688889999887 679999999988776543    45655432222211  12334455556887765


Q ss_pred             CCCh---------------HHHHHhhccccCCCEEEEEe
Q 020487          215 CMGA---------------SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       215 ~~g~---------------~~~~~~~~~l~~~g~~v~~g  238 (325)
                      ....               ..+..+.+.|+|||.+....
T Consensus       106 ~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~T  144 (204)
T d2fcaa1         106 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT  144 (204)
T ss_dssp             ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred             ccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEEE
Confidence            4433               23567778899999998763

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=88.34  E-value=0.21  Score=38.63  Aligned_cols=32  Identities=22%  Similarity=0.316  Sum_probs=28.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      |+|+|+ |..|++++..+...|.+|+++++++.
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            789998 99999999999999999999997654

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=88.34  E-value=0.36  Score=38.33  Aligned_cols=96  Identities=13%  Similarity=0.146  Sum_probs=64.5

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHH----cCCCE-EEeCCCchHHHHHHHHhCC
Q 020487          134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADV-CINYKTEDFVARVKEETGG  206 (325)
Q Consensus       134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~----~g~~~-~~~~~~~~~~~~~~~~~~~  206 (325)
                      ..++.++.+||=+|+ | .|..+..+++..  +.+|++++.++...+.+++    .+.+. ....+....       .-.
T Consensus        22 ~~~~~~~~~ILDiGc-G-~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~-------~~~   92 (281)
T d2gh1a1          22 VWKITKPVHIVDYGC-G-YGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-------ELN   92 (281)
T ss_dssp             TSCCCSCCEEEEETC-T-TTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTC-------CCS
T ss_pred             HhccCCcCEEEEecC-c-CCHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccccccc-------ccc
Confidence            345677889999997 3 588888888765  5799999999987777653    33322 222222111       112


Q ss_pred             CcccEEEeCCC-----h--HHHHHhhccccCCCEEEEEe
Q 020487          207 KGVDVILDCMG-----A--SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       207 ~~~d~vi~~~g-----~--~~~~~~~~~l~~~g~~v~~g  238 (325)
                      ..||+|+....     .  ..+..+.+.|+|||.++..-
T Consensus        93 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          93 DKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CCceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            36999986543     2  23678889999999998764

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=88.27  E-value=0.22  Score=38.87  Aligned_cols=32  Identities=19%  Similarity=0.204  Sum_probs=29.4

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      |+|+|+ |+.|++++..+...|.+|.+++++++
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            889998 99999999999999999999998765

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=88.26  E-value=0.4  Score=36.58  Aligned_cols=91  Identities=21%  Similarity=0.198  Sum_probs=58.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC--EEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD--VCINYKTEDFVARVKEETGGKGVDVILD  214 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~vi~  214 (325)
                      ..++.+||=+|+  +.|..+..+++ .|.+|++++.+++..+.+++...+  ..+..+..+.       ...+.||+|+.
T Consensus        18 ~~~~~~VLDiGc--G~G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~-------~~~~~fD~I~~   87 (225)
T d2p7ia1          18 FFRPGNLLELGS--FKGDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDA-------QLPRRYDNIVL   87 (225)
T ss_dssp             GCCSSCEEEESC--TTSHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-------CCSSCEEEEEE
T ss_pred             hCCCCcEEEEeC--CCcHHHHHHHH-cCCeEEEEeCcHHHhhhhhccccccccccccccccc-------ccccccccccc
Confidence            345778999986  34766666654 588999999999988888754322  2222222211       22347999975


Q ss_pred             CCC-----h--HHHHHhh-ccccCCCEEEEE
Q 020487          215 CMG-----A--SYFQRNL-GSLNIDGRLFII  237 (325)
Q Consensus       215 ~~g-----~--~~~~~~~-~~l~~~g~~v~~  237 (325)
                      .--     .  ..+..+. ++|+|||.++..
T Consensus        88 ~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          88 THVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             ESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             cceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            322     1  1245555 679999999875

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.25  E-value=0.26  Score=38.77  Aligned_cols=45  Identities=9%  Similarity=-0.019  Sum_probs=32.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD  182 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~  182 (325)
                      +...|.++|=+|+ |+ |...+..+.....+|++++-++...+.+++
T Consensus        51 g~~~g~~vLDiGc-G~-g~~~~~~~~~~~~~v~~~D~S~~~i~~~~~   95 (263)
T d2g72a1          51 GEVSGRTLIDIGS-GP-TVYQLLSACSHFEDITMTDFLEVNRQELGR   95 (263)
T ss_dssp             SCSCCSEEEEETC-TT-CCGGGTTGGGGCSEEEEECSCHHHHHHHHH
T ss_pred             CCCCCcEEEEecc-CC-CHHHHHHhcccCCeEEEEeCCHHHHHHHHH
Confidence            3456889999998 43 444334444445699999999998888774

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.18  E-value=1.9  Score=34.61  Aligned_cols=56  Identities=21%  Similarity=0.334  Sum_probs=42.5

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe---cChhhHHHHHHcCCCEE
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA---GSEEKLAVCKDLGADVC  188 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~---~~~~~~~~~~~~g~~~~  188 (325)
                      +...++++...+|...+|..|.+++..++..|.+++++.   .+..+.+.++.+|++.+
T Consensus        57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi  115 (320)
T d1z7wa1          57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELV  115 (320)
T ss_dssp             HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred             HcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceE
Confidence            445566776777888889999999999999999877766   33446677777887644

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.10  E-value=0.25  Score=36.06  Aligned_cols=98  Identities=12%  Similarity=0.081  Sum_probs=62.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCC-----chHHHHHHHHhCCCcccEEE
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-----EDFVARVKEETGGKGVDVIL  213 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~d~vi  213 (325)
                      .|.+++|.|-+..+|.-++.++.+.|++|+......... .  ..+++..+....     ....+.+++...  ..|+++
T Consensus        28 ~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~lk~~~~--~aDIvI  102 (171)
T d1edza1          28 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQK-F--TRGESLKLNKHHVEDLGEYSEDLLKKCSL--DSDVVI  102 (171)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEE-E--ESCCCSSCCCCEEEEEEECCHHHHHHHHH--HCSEEE
T ss_pred             CCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccc-c--ccccceeeeeeccccccccchhHHhhccc--cCCEEE
Confidence            489999999989999999999999999998766332111 0  011111110000     011223333332  579999


Q ss_pred             eCCChHHHHHhhccccCCCEEEEEeccC
Q 020487          214 DCMGASYFQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~  241 (325)
                      .++|.+.+.---+++++|..++.+|...
T Consensus       103 savG~p~~~i~~d~ik~GavvIDvGi~~  130 (171)
T d1edza1         103 TGVPSENYKFPTEYIKEGAVCINFACTK  130 (171)
T ss_dssp             ECCCCTTCCBCTTTSCTTEEEEECSSSC
T ss_pred             EccCCCccccChhhcccCceEeeccccc
Confidence            9999876433346788999999998654

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.02  E-value=0.24  Score=37.97  Aligned_cols=31  Identities=13%  Similarity=0.133  Sum_probs=28.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      |+|+|+ |..|+.++..+.+.|.+|.++.+++
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            789998 9999999999999999999999764

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.93  E-value=0.3  Score=38.68  Aligned_cols=101  Identities=21%  Similarity=0.225  Sum_probs=57.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHH----C---CCEEEEEecChhhHHHHHHc-C-----CCEEEeCCCch---HHHHH
Q 020487          137 LSPGESFLVHGGSSGIGTFAIQMGKC----Q---GVRVFVTAGSEEKLAVCKDL-G-----ADVCINYKTED---FVARV  200 (325)
Q Consensus       137 ~~~~~~vli~g~~g~~G~~~~~~a~~----~---g~~v~~~~~~~~~~~~~~~~-g-----~~~~~~~~~~~---~~~~~  200 (325)
                      .++.-+||=+|+  +.|..+..+++.    .   +.++++++.++...+.+++. .     ....++.....   +....
T Consensus        38 ~~~~~~VLDiGc--G~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (280)
T d1jqea_          38 TKSEIKILSIGG--GAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRM  115 (280)
T ss_dssp             TCSEEEEEEETC--TTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHH
T ss_pred             CCCCCeEEEEcC--CCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchh
Confidence            344457999987  234444444332    2   34678889888877777642 1     11112211211   11122


Q ss_pred             HHHhCCCcccEEEeCCCh-------HHHHHhhccccCCCEEEEEec
Q 020487          201 KEETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       201 ~~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ........||+|+..-.-       ..+..+.+.|+|+|.++....
T Consensus       116 ~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~  161 (280)
T d1jqea_         116 LEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV  161 (280)
T ss_dssp             TTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             cccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence            222334579999875432       246788899999998887643

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.92  E-value=0.51  Score=38.14  Aligned_cols=92  Identities=24%  Similarity=0.232  Sum_probs=52.4

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHH---HHHcCC-C--EEEeCCCchHHHHHHHHhCCC
Q 020487          135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAV---CKDLGA-D--VCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       135 ~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~---~~~~g~-~--~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      ..+.+|++||-+|+ | .|+....+|+ .|+ +|++++.++.....   .+..+. +  .++..+...+      .....
T Consensus        29 ~~~~~~~~VLDiGc-G-~G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~------~~~~~   99 (316)
T d1oria_          29 RHLFKDKVVLDVGS-G-TGILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEV------ELPVE   99 (316)
T ss_dssp             HHHHTTCEEEEETC-T-TSHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTC------CCSSS
T ss_pred             cccCCcCEEEEEec-C-CcHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHc------ccccc
Confidence            34567999999997 4 3666666666 576 79999977643221   222232 2  2333332221      02234


Q ss_pred             cccEEEeCC-Ch--------H-HHHHhhccccCCCEEE
Q 020487          208 GVDVILDCM-GA--------S-YFQRNLGSLNIDGRLF  235 (325)
Q Consensus       208 ~~d~vi~~~-g~--------~-~~~~~~~~l~~~g~~v  235 (325)
                      .+|+|+... +.        + .+...-+.|+|+|+++
T Consensus       100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            689987532 21        1 2344457899999886

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=87.79  E-value=2.8  Score=32.96  Aligned_cols=105  Identities=18%  Similarity=0.296  Sum_probs=64.8

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec---ChhhHHHHHHcCCCEEEeCCCchH-------------
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDLGADVCINYKTEDF-------------  196 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~-------------  196 (325)
                      +...+.++.. ++...+|..|.+++..++.+|.+++++..   ++.+.+.++.+|++.++.......             
T Consensus        53 ~~g~~~~~~~-vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~  131 (292)
T d2bhsa1          53 KRGEIKPGDV-LIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANR  131 (292)
T ss_dssp             HTTSCCTTSE-EEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH
T ss_pred             HhCCcCCCce-eeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhcccc
Confidence            4444555554 55556699999999999999998777764   455667778888864432211110             


Q ss_pred             ----------------------HHHHHHHhCCCcccEEEeCCChHH----HHHhhccccCCCEEEEEec
Q 020487          197 ----------------------VARVKEETGGKGVDVILDCMGASY----FQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       197 ----------------------~~~~~~~~~~~~~d~vi~~~g~~~----~~~~~~~l~~~g~~v~~g~  239 (325)
                                            ..++.+..++ .+|.++-++|+--    +...++...+..+++.+..
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~-~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep  199 (292)
T d2bhsa1         132 GEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGG-RITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP  199 (292)
T ss_dssp             TSSEECCTTTCTHHHHHHHHTHHHHHHHHTTT-CCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred             ccccccCCCchhcchhhHHHHHHHHhHHhcCC-CCCcccccCCCccchhhhhhhhhhccCcceEEEecc
Confidence                                  1122222333 4788888877522    3445566677788776643

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=87.79  E-value=0.79  Score=35.42  Aligned_cols=34  Identities=15%  Similarity=0.319  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      .|.+|+|.|. |.+|..+++++...|++|+.++..
T Consensus        30 ~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          30 EGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeecc
Confidence            5899999998 999999999999999999988854

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=87.79  E-value=0.86  Score=35.42  Aligned_cols=99  Identities=16%  Similarity=0.096  Sum_probs=65.7

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHc-CC-CE--EEeCCCchHHHHHHHHhCCCc
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-GA-DV--CINYKTEDFVARVKEETGGKG  208 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~-g~-~~--~~~~~~~~~~~~~~~~~~~~~  208 (325)
                      ......++.+||=+|+  +.|..+.+++.....+|++++.+++-.+.+++. .. ..  ++..+...+      ......
T Consensus        87 ~~l~~~~~~~vLD~Gc--G~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~------~~~~~~  158 (254)
T d1xtpa_          87 ASLPGHGTSRALDCGA--GIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETA------TLPPNT  158 (254)
T ss_dssp             HTSTTCCCSEEEEETC--TTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGC------CCCSSC
T ss_pred             hhCCCCCCCeEEEecc--cCChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEcccccc------ccCCCc
Confidence            4445567889999996  468888888877777999999999988888753 22 21  222222111      012346


Q ss_pred             ccEEEeCCC-----hH----HHHHhhccccCCCEEEEEec
Q 020487          209 VDVILDCMG-----AS----YFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       209 ~d~vi~~~g-----~~----~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ||+|+..-.     .+    .+..+.+.|+++|.++..-.
T Consensus       159 fD~I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e~  198 (254)
T d1xtpa_         159 YDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN  198 (254)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cceEEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEec
Confidence            999976432     22    25677788999999987643

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.60  E-value=0.52  Score=33.49  Aligned_cols=47  Identities=11%  Similarity=0.030  Sum_probs=37.0

Q ss_pred             HHHHHHHhhcCCCCCCEEEEE--cCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          126 TVWSTVFMTSHLSPGESFLVH--GGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       126 ~a~~~l~~~~~~~~~~~vli~--g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      |..-.+  ..+..++..++|.  |+ |-+|+-+++.+...|.+|+++++.+.
T Consensus        27 t~~d~l--~~~~~~~~~vvi~d~gg-g~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          27 TPEQVM--DGKKKIGKRVVILNADT-YFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CHHHHH--HTCSCCCSEEEEEECCC-SSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CHHHHh--cCccccCCceEEEecCC-ChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            334444  3456788888887  65 99999999999999999999997654

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=87.49  E-value=0.35  Score=34.98  Aligned_cols=35  Identities=23%  Similarity=0.276  Sum_probs=29.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSE  174 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~  174 (325)
                      .|++|+|.|+ |..|+.+++.++.++  .+|+++.+.+
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            3789999999 999999999998877  4888887655

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=87.49  E-value=1.3  Score=32.29  Aligned_cols=89  Identities=10%  Similarity=0.053  Sum_probs=52.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHH----HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      +|.|.|++|-+|.-+++++..+- .++..+..+...-..+.    .+-.+..+....   .+.+.+     ..|++|-|.
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~---~~~~~~-----~~dvvf~a~   74 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFD---PEKVSK-----NCDVLFTAL   74 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCC---HHHHHH-----HCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccC---HhHhcc-----ccceEEEcc
Confidence            58999999999999999998874 47776653332221121    121222221111   112211     589999999


Q ss_pred             ChHHHHHhhccccCCCEEEEEec
Q 020487          217 GASYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       217 g~~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      +........... .+-++|+.+.
T Consensus        75 p~~~s~~~~~~~-~~~~VIDlSa   96 (176)
T d1vkna1          75 PAGASYDLVREL-KGVKIIDLGA   96 (176)
T ss_dssp             STTHHHHHHTTC-CSCEEEESSS
T ss_pred             ccHHHHHHHHhh-ccceEEecCc
Confidence            876655444433 4567776643

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.40  E-value=2.3  Score=30.87  Aligned_cols=86  Identities=10%  Similarity=0.008  Sum_probs=54.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEe-cChhhHHHH-HHcCCC---EEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTA-GSEEKLAVC-KDLGAD---VCINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~-~~~~~~~~~-~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      ++.|+|+ |.+|...++.++.. ++++++++ +++++...+ ++++..   .+++        .+.+......+|+|+-|
T Consensus         3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ll~~~~iD~v~I~   73 (184)
T d1ydwa1           3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHG--------SYESLLEDPEIDALYVP   73 (184)
T ss_dssp             EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEES--------SHHHHHHCTTCCEEEEC
T ss_pred             EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecC--------cHHHhhhccccceeeec
Confidence            5889997 88998888888777 67888765 455544443 445432   2322        12233334478999999


Q ss_pred             CChHH-HHHhhccccCCCEEEEE
Q 020487          216 MGASY-FQRNLGSLNIDGRLFII  237 (325)
Q Consensus       216 ~g~~~-~~~~~~~l~~~g~~v~~  237 (325)
                      +.... +..+..++..| .=|.+
T Consensus        74 tp~~~h~~~~~~~l~~g-~~v~~   95 (184)
T d1ydwa1          74 LPTSLHVEWAIKAAEKG-KHILL   95 (184)
T ss_dssp             CCGGGHHHHHHHHHTTT-CEEEE
T ss_pred             ccchhhcchhhhhhhcc-ceeec
Confidence            88754 56666777765 44444

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=87.35  E-value=1.4  Score=36.42  Aligned_cols=54  Identities=22%  Similarity=0.231  Sum_probs=41.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec---ChhhHHHHHHcCCCEEEe
Q 020487          136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDLGADVCIN  190 (325)
Q Consensus       136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~---~~~~~~~~~~~g~~~~~~  190 (325)
                      +++++.+ +|...+|..|.+++.+++.+|.+++++..   ++.+.+.++.+|++.+..
T Consensus       140 ~~~~g~~-VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~  196 (382)
T d1wkva1         140 RVEKGSL-VADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVD  196 (382)
T ss_dssp             TSCTTCE-EEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCCE-EEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeec
Confidence            4567765 45566799999999999999998888774   345667778899876543

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.06  E-value=0.66  Score=36.66  Aligned_cols=94  Identities=21%  Similarity=0.238  Sum_probs=57.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcC-C------------C---EEEeCCCchHHHHHH
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG-A------------D---VCINYKTEDFVARVK  201 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g-~------------~---~~~~~~~~~~~~~~~  201 (325)
                      .+.++|||+|+  +-|..+-.+++....+|.++..+++-.+.++++- .            +   +++..+.   ...++
T Consensus        71 ~~p~~vLiiG~--G~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da---~~~l~  145 (276)
T d1mjfa_          71 PKPKRVLVIGG--GDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDG---FEFIK  145 (276)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCH---HHHHH
T ss_pred             CCCceEEEecC--CchHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChH---HHHHh
Confidence            44578999996  2355555666654458999998888777776421 1            1   2333222   22333


Q ss_pred             HHhCCCcccEEEe-CCCh----------HHHHHhhccccCCCEEEEEec
Q 020487          202 EETGGKGVDVILD-CMGA----------SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       202 ~~~~~~~~d~vi~-~~g~----------~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      +   .+.||+||- +...          +.+..+.+.|+++|.++.-+.
T Consensus       146 ~---~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~~  191 (276)
T d1mjfa_         146 N---NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG  191 (276)
T ss_dssp             H---CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             c---cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEecC
Confidence            2   357999974 3221          225677789999999987653

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=86.88  E-value=0.15  Score=40.04  Aligned_cols=96  Identities=20%  Similarity=0.238  Sum_probs=60.0

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHH----HcCC-CE--EEeCCCchHHHHHHHHh
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCK----DLGA-DV--CINYKTEDFVARVKEET  204 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~----~~g~-~~--~~~~~~~~~~~~~~~~~  204 (325)
                      ....+.+..+||=+|+  +.|..+..++++. +.++++++.. +..+.++    +.+. +.  .+..+...       ..
T Consensus        74 ~~~d~~~~~~VLDvGc--G~G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~~D~~~-------~~  143 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVGG--GKGGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVEGDFFE-------PL  143 (253)
T ss_dssp             HHSCCTTCSEEEEETC--TTSHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEECCTTS-------CC
T ss_pred             hhcCCccCCEEEEeCC--CCCHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhccccchh-------hc
Confidence            4456778889999986  5688888999887 5688888853 3333332    3332 21  22221111       01


Q ss_pred             CCCcccEEEeCC-----ChH----HHHHhhccccCCCEEEEEec
Q 020487          205 GGKGVDVILDCM-----GAS----YFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       205 ~~~~~d~vi~~~-----g~~----~~~~~~~~l~~~g~~v~~g~  239 (325)
                       ..++|+|+-..     +.+    .+..+.+.|+|||+++....
T Consensus       144 -~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         144 -PRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             -SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             -ccchhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence             13689987442     222    25778899999999998753

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=86.71  E-value=0.33  Score=35.44  Aligned_cols=29  Identities=21%  Similarity=0.277  Sum_probs=27.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAG  172 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~  172 (325)
                      |+|+|+ |+.|+.++..+.+.|.+|.++.+
T Consensus         4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~   32 (184)
T d1fl2a1           4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGE   32 (184)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEEE
Confidence            789998 99999999999999999999985

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=86.55  E-value=2.6  Score=33.79  Aligned_cols=98  Identities=11%  Similarity=0.093  Sum_probs=58.4

Q ss_pred             CCCCCCEEEEEcC-CchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHH------cCCC--EEEeCCCchHHHHHHHHhC
Q 020487          136 HLSPGESFLVHGG-SSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD------LGAD--VCINYKTEDFVARVKEETG  205 (325)
Q Consensus       136 ~~~~~~~vli~g~-~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~------~g~~--~~~~~~~~~~~~~~~~~~~  205 (325)
                      .+.+|++||=..+ +|+++   +..++ .|+ +|+.++.++...+.+++      ++.+  .++..+...+...+.  ..
T Consensus       141 ~~~~g~~VLdlf~~~G~~s---l~aa~-~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~~l~~~~--~~  214 (317)
T d2b78a2         141 GSAAGKTVLNLFSYTAAFS---VAAAM-GGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYAR--RH  214 (317)
T ss_dssp             TTTBTCEEEEETCTTTHHH---HHHHH-TTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHH--HT
T ss_pred             HhhCCCceeecCCCCcHHH---HHHHh-CCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHHHHHHHH--hh
Confidence            4578999987755 44444   33333 476 79999999888777652      2222  233333333322222  23


Q ss_pred             CCcccEEEeCCC---h-------------HHHHHhhccccCCCEEEEEec
Q 020487          206 GKGVDVILDCMG---A-------------SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       206 ~~~~d~vi~~~g---~-------------~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      ++.||+||---+   .             ..+..+++.|+|||.++.+..
T Consensus       215 ~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~sc  264 (317)
T d2b78a2         215 HLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN  264 (317)
T ss_dssp             TCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             cCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            457999984221   1             124567788999999988754

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=86.54  E-value=1  Score=36.09  Aligned_cols=95  Identities=24%  Similarity=0.240  Sum_probs=60.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCC----------EEEeCCCchHHHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGAD----------VCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~----------~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      ..++|||+|+  +-|..+-.+++..+. +|.++...++-.+.++++-..          .++.   .+....+++  ..+
T Consensus       106 ~pk~VLIiGg--G~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i---~Da~~~l~~--~~~  178 (312)
T d2b2ca1         106 DPKRVLIIGG--GDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC---GDGFEFLKN--HKN  178 (312)
T ss_dssp             SCCEEEEESC--TTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC---SCHHHHHHH--CTT
T ss_pred             CCCeEEEeCC--CchHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEE---chHHHHHHh--CCC
Confidence            4578999996  346666677777664 899999998888877763210          1221   222333433  245


Q ss_pred             cccEEEeCCCh-----------HHHHHhhccccCCCEEEEEecc
Q 020487          208 GVDVILDCMGA-----------SYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       208 ~~d~vi~~~g~-----------~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      .||+||--...           +.+..+.++|+++|.++.-+..
T Consensus       179 ~yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~s  222 (312)
T d2b2ca1         179 EFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGES  222 (312)
T ss_dssp             CEEEEEECCC-------------HHHHHHHHEEEEEEEEEECCC
T ss_pred             CCCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecCC
Confidence            79999843321           1245667889999999987543

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=86.35  E-value=0.29  Score=36.94  Aligned_cols=31  Identities=16%  Similarity=0.153  Sum_probs=27.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      |+|+|+ |+.|+.++..+.++|.+|+++...+
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            788998 9999999999999999999998653

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=86.17  E-value=0.34  Score=37.94  Aligned_cols=32  Identities=16%  Similarity=0.079  Sum_probs=28.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      -|+|+|+ |.+|++++.-+...|.+|+++++.+
T Consensus         6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            3889998 9999999999999999999999754

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.14  E-value=0.35  Score=35.29  Aligned_cols=34  Identities=9%  Similarity=-0.000  Sum_probs=28.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      .+++|+|.|+ |.+|.-++..++++|.++.++...
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~   35 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVG   35 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEec
Confidence            4789999998 999999999999999876555433

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=86.08  E-value=1.7  Score=33.37  Aligned_cols=31  Identities=26%  Similarity=0.318  Sum_probs=27.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEe
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTA  171 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~  171 (325)
                      +.+|+|.|+ |++|..++..+...|. ++++++
T Consensus        30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD   61 (247)
T d1jw9b_          30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLD   61 (247)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEEC
Confidence            468999998 9999999999999999 777766

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=86.04  E-value=0.2  Score=37.09  Aligned_cols=34  Identities=18%  Similarity=0.235  Sum_probs=30.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      +..|+|+|+ |+.|+.++..+.+.|.+|+++.+..
T Consensus         5 ~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           5 HSKLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            457999998 9999999999999999999997543

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.70  E-value=0.36  Score=39.10  Aligned_cols=31  Identities=26%  Similarity=0.331  Sum_probs=28.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      |+|+|| |..|++++..+++.|.+|++++.++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789998 9999999999999999999998654

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=85.70  E-value=1.6  Score=31.50  Aligned_cols=92  Identities=14%  Similarity=0.220  Sum_probs=56.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh---hhHHHHHHc----C---CC------E---------EEeCCCch-
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---EKLAVCKDL----G---AD------V---------CINYKTED-  195 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~---~~~~~~~~~----g---~~------~---------~~~~~~~~-  195 (325)
                      +|.|.|- |.+|.++.+.+...+.+++++....   +....+-++    |   .+      .         ++...... 
T Consensus         2 kIgINGf-GRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~   80 (169)
T d1dssg1           2 KIGINGF-GRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN   80 (169)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             eEEEECC-cHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence            5889997 9999999999988888888877532   333333331    1   11      1         11111111 


Q ss_pred             -HHHHHHHHhCCCcccEEEeCCChHH-HHHhhccccCCCEEEEEeccC
Q 020487          196 -FVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       196 -~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~  241 (325)
                       .+..       .++|+|+||+|.-. ...+...+..+.+-|.+..+.
T Consensus        81 i~W~~-------~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~  121 (169)
T d1dssg1          81 IPWSK-------AGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS  121 (169)
T ss_dssp             CCHHH-------HTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred             CCccc-------cCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCc
Confidence             1111       17999999999743 455566777777667665433

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.55  E-value=0.68  Score=34.61  Aligned_cols=40  Identities=15%  Similarity=0.161  Sum_probs=35.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD  182 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~  182 (325)
                      +|.|+|. |-+|+.++..+...|.+|++++.++++.+.+.+
T Consensus         2 kI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           2 RISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             EEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc
Confidence            5889998 999999999999999999999999888877764

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=85.41  E-value=0.44  Score=37.74  Aligned_cols=29  Identities=24%  Similarity=0.470  Sum_probs=25.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCC-EEEEEe
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGV-RVFVTA  171 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~-~v~~~~  171 (325)
                      |||+|++|-+|..++..+...|. .|+++.
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d   31 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVD   31 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEE
Confidence            79999999999999988888897 687774

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=85.34  E-value=1  Score=36.64  Aligned_cols=104  Identities=18%  Similarity=0.162  Sum_probs=64.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHH-HHCCC-EEEEEecChhhHHHH-HHcCC---CEEEeCCCchHHHHHHHHhCCCcccE
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMG-KCQGV-RVFVTAGSEEKLAVC-KDLGA---DVCINYKTEDFVARVKEETGGKGVDV  211 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a-~~~g~-~v~~~~~~~~~~~~~-~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~d~  211 (325)
                      +..+++.|+|+ |..+...++.. ...+. +|.+..++.++.+.+ +++..   -.+....  +.    .+..  ++.|+
T Consensus       126 ~da~~l~iiG~-G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~--s~----~eav--~~ADI  196 (340)
T d1x7da_         126 PNARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRAS--SV----AEAV--KGVDI  196 (340)
T ss_dssp             TTCCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECS--SH----HHHH--TTCSE
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecC--CH----HHHH--hcCCc
Confidence            45688999998 88887766654 45576 899999998776544 33321   1222211  11    2222  26899


Q ss_pred             EEeCCChHHHH--HhhccccCCCEEEEEeccCCcccccchH
Q 020487          212 ILDCMGASYFQ--RNLGSLNIDGRLFIIGTQGGAKTELNIT  250 (325)
Q Consensus       212 vi~~~g~~~~~--~~~~~l~~~g~~v~~g~~~~~~~~~~~~  250 (325)
                      ++.|..+....  --.++++||-.+..+|........++..
T Consensus       197 i~t~Tas~s~~Pv~~~~~l~pG~hI~aiGs~~p~~~Eld~~  237 (340)
T d1x7da_         197 ITTVTADKAYATIITPDMLEPGMHLNAVGGDCPGKTELHAD  237 (340)
T ss_dssp             EEECCCCSSEEEEECGGGCCTTCEEEECSCCBTTBEEECHH
T ss_pred             eeeccccCCCCcccchhhcCCCCEEeecccchhhhhccCHH
Confidence            99877643211  1136789999999998766544445443

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.22  E-value=0.64  Score=36.94  Aligned_cols=34  Identities=18%  Similarity=0.295  Sum_probs=30.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      .|.+|+|.|. |.+|..+++.+...|++|+.+..+
T Consensus        35 ~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          35 GDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEcc
Confidence            4789999998 999999999999999999998743

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=85.18  E-value=0.42  Score=36.01  Aligned_cols=30  Identities=17%  Similarity=0.311  Sum_probs=27.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      ++|+|+ |+.|+.++..+..+|.+|.++.+.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            789998 999999999999999999999864

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=85.16  E-value=2.4  Score=30.21  Aligned_cols=85  Identities=8%  Similarity=-0.001  Sum_probs=53.6

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHC-CCEEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          142 SFLVHGGSSGIGTF-AIQMGKCQ-GVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       142 ~vli~g~~g~~G~~-~~~~a~~~-g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      ++.|+|+ |.+|.- .....+.. ++.++++++++++.+.+. +++...+++...+.        .. ..+|+|+-|+..
T Consensus         3 rvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l--------l~-~~iD~V~I~tp~   72 (167)
T d1xeaa1           3 KIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDV--------LQ-YGVDAVMIHAAT   72 (167)
T ss_dssp             EEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGG--------GG-GCCSEEEECSCG
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccHHHh--------cc-cccceecccccc
Confidence            6889998 888854 55566555 568887777777766554 56665443321211        11 258999999887


Q ss_pred             HH-HHHhhccccCCCEEEEE
Q 020487          219 SY-FQRNLGSLNIDGRLFII  237 (325)
Q Consensus       219 ~~-~~~~~~~l~~~g~~v~~  237 (325)
                      .. ...+..++..| .=|.+
T Consensus        73 ~~H~~~~~~al~~g-k~V~~   91 (167)
T d1xeaa1          73 DVHSTLAAFFLHLG-IPTFV   91 (167)
T ss_dssp             GGHHHHHHHHHHTT-CCEEE
T ss_pred             cccccccccccccc-ccccc
Confidence            54 56666677765 33444

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=85.09  E-value=3.9  Score=30.16  Aligned_cols=72  Identities=14%  Similarity=0.102  Sum_probs=44.8

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      ....++ |++||=.|+ | .|..++. +...|+ +|+.++.++...+.+++ .....++..+...        . .+.||
T Consensus        43 ~~~dl~-Gk~VLDlGc-G-tG~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~~~--------l-~~~fD  109 (197)
T d1ne2a_          43 NDGNIG-GRSVIDAGT-G-NGILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSE--------I-SGKYD  109 (197)
T ss_dssp             HHTSSB-TSEEEEETC-T-TCHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGG--------C-CCCEE
T ss_pred             HcCCCC-CCEEEEeCC-C-CcHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEEehhh--------c-CCcce
Confidence            455554 899999987 3 2444444 444565 79999999988887775 3333444433221        1 23699


Q ss_pred             EEEeCCC
Q 020487          211 VILDCMG  217 (325)
Q Consensus       211 ~vi~~~g  217 (325)
                      +|+...+
T Consensus       110 ~Vi~NPP  116 (197)
T d1ne2a_         110 TWIMNPP  116 (197)
T ss_dssp             EEEECCC
T ss_pred             EEEeCcc
Confidence            9986543

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.00  E-value=3.9  Score=31.05  Aligned_cols=34  Identities=24%  Similarity=0.322  Sum_probs=29.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHH-HHCCCEEEEEecC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMG-KCQGVRVFVTAGS  173 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a-~~~g~~v~~~~~~  173 (325)
                      .+.+++|.|. |.+|..+++.+ +..|++|+.+..+
T Consensus        30 ~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vsd~   64 (234)
T d1b26a1          30 KKATVAVQGF-GNVGQFAALLISQELGSKVVAVSDS   64 (234)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCceEEeecC
Confidence            5889999997 99999999887 5679999988743

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=84.99  E-value=5.2  Score=28.74  Aligned_cols=86  Identities=10%  Similarity=-0.023  Sum_probs=52.2

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHC-C-CEEEEEe-cChhhHHHH-HHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          142 SFLVHGGSSGIGTF-AIQMGKCQ-G-VRVFVTA-GSEEKLAVC-KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       142 ~vli~g~~g~~G~~-~~~~a~~~-g-~~v~~~~-~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      ++.|.|+ |.+|.- .+...+.. + +++++++ ++.++.+.+ +.++...+++    +    +.+......+|+|+-|+
T Consensus         5 rigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~----~----~~ell~~~~id~v~I~t   75 (181)
T d1zh8a1           5 RLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD----S----YEELLESGLVDAVDLTL   75 (181)
T ss_dssp             EEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES----C----HHHHHHSSCCSEEEECC
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee----e----eeccccccccceeeccc
Confidence            6889998 888864 45666654 3 4777665 445554443 4577665542    1    12233345689999888


Q ss_pred             ChHH-HHHhhccccCCCEEEEE
Q 020487          217 GASY-FQRNLGSLNIDGRLFII  237 (325)
Q Consensus       217 g~~~-~~~~~~~l~~~g~~v~~  237 (325)
                      .... ...+..++..| .=|.+
T Consensus        76 p~~~h~~~~~~al~~g-k~V~~   96 (181)
T d1zh8a1          76 PVELNLPFIEKALRKG-VHVIC   96 (181)
T ss_dssp             CGGGHHHHHHHHHHTT-CEEEE
T ss_pred             cccccccccccccccc-hhhhc
Confidence            8754 45555666655 55555

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=84.94  E-value=0.37  Score=38.64  Aligned_cols=32  Identities=16%  Similarity=0.239  Sum_probs=28.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      .++|+|| |..|+.++..+...|.+|.++..++
T Consensus         3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            3789998 9999999999998999999999654

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.93  E-value=1.1  Score=35.43  Aligned_cols=96  Identities=24%  Similarity=0.240  Sum_probs=58.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcC---------CC-EEEeCCCchHHHHHHHHhCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLG---------AD-VCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g---------~~-~~~~~~~~~~~~~~~~~~~~  206 (325)
                      ...++|||+|+  +-|..+-.+++..+. +|+++...++-.+.+++.-         .. .++..+.   ...+++  ..
T Consensus        77 ~~pk~vLiiGg--G~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da---~~~l~~--~~  149 (285)
T d2o07a1          77 PNPRKVLIIGG--GDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDG---FEFMKQ--NQ  149 (285)
T ss_dssp             SSCCEEEEEEC--TTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH---HHHHHT--CS
T ss_pred             cCcCeEEEeCC--CchHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccH---HHHHhc--CC
Confidence            34578999996  346666777777654 8999998888777776421         11 2222222   222322  23


Q ss_pred             CcccEEEeCCCh-----------HHHHHhhccccCCCEEEEEecc
Q 020487          207 KGVDVILDCMGA-----------SYFQRNLGSLNIDGRLFIIGTQ  240 (325)
Q Consensus       207 ~~~d~vi~~~g~-----------~~~~~~~~~l~~~g~~v~~g~~  240 (325)
                      +.||+|+--...           +.+..+.+.|+++|.++.-...
T Consensus       150 ~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~s  194 (285)
T d2o07a1         150 DAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC  194 (285)
T ss_dssp             SCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             CCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEeccc
Confidence            479999732221           1245667899999999877543

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.87  E-value=0.45  Score=36.09  Aligned_cols=31  Identities=16%  Similarity=0.172  Sum_probs=27.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      |+|+|+ |+.|+.++..+...|.+|.+++..+
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKRG   38 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            788998 9999999999999999999998653

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=84.66  E-value=1.9  Score=33.81  Aligned_cols=95  Identities=19%  Similarity=0.186  Sum_probs=61.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHc-----CC--C---EEEeCCCchHHHHHHHHhCC
Q 020487          138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDL-----GA--D---VCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~-----g~--~---~~~~~~~~~~~~~~~~~~~~  206 (325)
                      .+.++|||+|+  +-|..+..+++..+. +|.+++.+++-.+.+++.     ++  +   .++..+...+   +++ . +
T Consensus        74 ~~p~~vLiiGg--G~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D~~~~---l~~-~-~  146 (274)
T d1iy9a_          74 PNPEHVLVVGG--GDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMH---IAK-S-E  146 (274)
T ss_dssp             SSCCEEEEESC--TTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHH---HHT-C-C
T ss_pred             CCcceEEecCC--CCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEechHHHH---Hhh-c-C
Confidence            34578999996  346677777777665 999999998877776642     21  1   2333333222   322 2 3


Q ss_pred             CcccEEEeCCCh-----------HHHHHhhccccCCCEEEEEec
Q 020487          207 KGVDVILDCMGA-----------SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       207 ~~~d~vi~~~g~-----------~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      +.||+|+--...           +.+..+.+.|+++|.++.-..
T Consensus       147 ~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~~  190 (274)
T d1iy9a_         147 NQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD  190 (274)
T ss_dssp             SCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEecC
Confidence            579999733211           235677889999999997643

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=84.61  E-value=0.47  Score=38.04  Aligned_cols=33  Identities=24%  Similarity=0.252  Sum_probs=29.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  175 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~  175 (325)
                      .|+|+|| |..|++++..++..|.+|.++++.++
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            4899999 99999999999999999999987643

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=84.45  E-value=0.51  Score=35.90  Aligned_cols=31  Identities=23%  Similarity=0.252  Sum_probs=28.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      ++|+|+ |+.|+.++..+...|.+|.++.+.+
T Consensus         9 viIIG~-GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGG-GPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            788898 9999999999999999999998654

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=84.25  E-value=0.4  Score=34.26  Aligned_cols=92  Identities=16%  Similarity=0.073  Sum_probs=54.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEecChhhHHHHHHcCCCE-EEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487          140 GESFLVHGGSSGIGTFAIQMGKCQGV---RVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVARVKEETGGKGVDVILDC  215 (325)
Q Consensus       140 ~~~vli~g~~g~~G~~~~~~a~~~g~---~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (325)
                      |-+|.|.||+|-+|.-+++++..+..   ++.....+...-.......... ..+..+..          ....|+++-+
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~~~----------~~~~d~~f~~   70 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETA----------FEGVDIALFS   70 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCTTT----------TTTCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccchhh----------hhhhhhhhhc
Confidence            34799999999999999999998853   4444442211111000011111 11122211          1267999999


Q ss_pred             CChHHH-HHhhccccCCCEEEEEeccC
Q 020487          216 MGASYF-QRNLGSLNIDGRLFIIGTQG  241 (325)
Q Consensus       216 ~g~~~~-~~~~~~l~~~g~~v~~g~~~  241 (325)
                      .+.... ....+....+-++|+.+...
T Consensus        71 ~~~~~s~~~~~~~~~~~~~VIDlSsdf   97 (154)
T d2gz1a1          71 AGSSTSAKYAPYAVKAGVVVVDNTSYF   97 (154)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             cCccchhhHHhhhccccceehhcChhh
Confidence            987654 34445667788899886544

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.12  E-value=3.5  Score=31.50  Aligned_cols=34  Identities=18%  Similarity=0.353  Sum_probs=29.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHH-HCCCEEEEEecC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGS  173 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~-~~g~~v~~~~~~  173 (325)
                      .|.+|+|.|. |.+|..+++++. ..|++|+.+..+
T Consensus        31 ~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          31 KGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCcceeecccc
Confidence            5899999998 999999998774 579999988754

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=83.98  E-value=0.55  Score=35.32  Aligned_cols=30  Identities=23%  Similarity=0.168  Sum_probs=27.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      ++|+|+ |+.|+.++..|.+.|.+|.++.+.
T Consensus         6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKG   35 (223)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecC
Confidence            678898 999999999999999999999754

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.61  E-value=1.2  Score=35.41  Aligned_cols=95  Identities=18%  Similarity=0.218  Sum_probs=59.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcC---------CC-EEEeCCCchHHHHHHHHhCCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLG---------AD-VCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g---------~~-~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      ..++|||+|+  +-|..+-.+++..+. +|.++..+++-.+.+++.-         .. .++..+.   ...+.+ ..++
T Consensus        80 ~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da---~~~l~~-~~~~  153 (290)
T d1xj5a_          80 NPKKVLVIGG--GDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDG---VAFLKN-AAEG  153 (290)
T ss_dssp             CCCEEEEETC--SSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCH---HHHHHT-SCTT
T ss_pred             CCcceEEecC--CchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEccH---HHHHhh-cccc
Confidence            4578999996  336666677777665 8999999988777776531         11 2222222   222222 3334


Q ss_pred             cccEEE-eCCC---h-------HHHHHhhccccCCCEEEEEec
Q 020487          208 GVDVIL-DCMG---A-------SYFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       208 ~~d~vi-~~~g---~-------~~~~~~~~~l~~~g~~v~~g~  239 (325)
                      .||+|| |+..   .       +.+..+.++|+++|.++.-..
T Consensus       154 ~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~  196 (290)
T d1xj5a_         154 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE  196 (290)
T ss_dssp             CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEecC
Confidence            799876 3332   1       235677889999999998743

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=83.55  E-value=0.42  Score=38.81  Aligned_cols=31  Identities=16%  Similarity=0.222  Sum_probs=26.4

Q ss_pred             EEEEcCCchHHHHHHHHHH-----HCCCEEEEEecCh
Q 020487          143 FLVHGGSSGIGTFAIQMGK-----CQGVRVFVTAGSE  174 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~-----~~g~~v~~~~~~~  174 (325)
                      |+|.|| |..|++++..+.     ..|.+|+++.+.+
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~   45 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRS   45 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence            899999 999999988873     5699999998654

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=83.46  E-value=0.53  Score=36.94  Aligned_cols=30  Identities=23%  Similarity=0.253  Sum_probs=27.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      |+|+|+ |.+|++++.-+...|.+|+++++.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            789998 999999999999999999999864

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=83.34  E-value=0.49  Score=35.74  Aligned_cols=30  Identities=23%  Similarity=0.336  Sum_probs=27.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      ++|+|+ |+.|+.++..+..+|.+|.++...
T Consensus         8 lvVIG~-GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           8 LLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            789998 999999999999999999999854

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.22  E-value=0.17  Score=35.94  Aligned_cols=89  Identities=9%  Similarity=0.013  Sum_probs=51.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC---CCEEEEEecChhhHHHHHHcCCCEEE-eCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQ---GVRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGKGVDVILDCM  216 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~---g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (325)
                      -+|.|.||+|-+|.-+++++..+   ..++..+..+...-..+...+.+..+ +....          ...+.|++|-|.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~~----------~~~~~d~vf~a~   72 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSF----------DFSSVGLAFFAA   72 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGC----------CGGGCSEEEECS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccchhh----------hhccceEEEecC
Confidence            46899999999999999999643   35777666443221111111111111 11111          113689999999


Q ss_pred             ChHHHHHhh-ccccCCCEEEEEec
Q 020487          217 GASYFQRNL-GSLNIDGRLFIIGT  239 (325)
Q Consensus       217 g~~~~~~~~-~~l~~~g~~v~~g~  239 (325)
                      +........ .....+..+++.+.
T Consensus        73 p~~~s~~~~~~~~~~g~~VID~Ss   96 (144)
T d2hjsa1          73 AAEVSRAHAERARAAGCSVIDLSG   96 (144)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEETTC
T ss_pred             CcchhhhhccccccCCceEEeech
Confidence            987654444 44556667777644

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=83.21  E-value=0.55  Score=37.49  Aligned_cols=31  Identities=23%  Similarity=0.298  Sum_probs=28.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  174 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~  174 (325)
                      |+|+|+ |..|++++.-|...|.+|++++...
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            899998 9999999999999999999998643

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=82.82  E-value=1.2  Score=35.87  Aligned_cols=93  Identities=22%  Similarity=0.249  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHHHc------CC---C--EEEeCCCchHHHHHHHHhCC
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDL------GA---D--VCINYKTEDFVARVKEETGG  206 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~~------g~---~--~~~~~~~~~~~~~~~~~~~~  206 (325)
                      ..++|||+|+  +.|..+..+++... .+|.++..+++-.+.+++.      +.   .  .++..+.   ...+.+ . +
T Consensus        77 ~pk~VLiiG~--G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da---~~~l~~-~-~  149 (312)
T d1uira_          77 EPKRVLIVGG--GEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDA---RAYLER-T-E  149 (312)
T ss_dssp             CCCEEEEEEC--TTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCH---HHHHHH-C-C
T ss_pred             CcceEEEeCC--CchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEchH---HHHhhh-c-C
Confidence            4578999996  34666777777764 5999999998877766642      11   1  2332222   222332 3 3


Q ss_pred             CcccEEEe-C---CCh----------HHHHHhhccccCCCEEEEEe
Q 020487          207 KGVDVILD-C---MGA----------SYFQRNLGSLNIDGRLFIIG  238 (325)
Q Consensus       207 ~~~d~vi~-~---~g~----------~~~~~~~~~l~~~g~~v~~g  238 (325)
                      +.||+||- .   .+.          +.+..+.+.|+++|.++.-.
T Consensus       150 ~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~~  195 (312)
T d1uira_         150 ERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT  195 (312)
T ss_dssp             CCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEec
Confidence            47999973 2   121          12467778999999988654

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=82.82  E-value=0.5  Score=33.44  Aligned_cols=90  Identities=17%  Similarity=0.221  Sum_probs=48.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC----CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQ----GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  217 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~----g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  217 (325)
                      +|.|+|++|-+|.-+++++..+    ..++..+..+...-.. -.++.+........+ ...    .  +.+|++|-|.+
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~-~~~~~~~~~~~~~~~-~~~----~--~~~DvvF~alp   73 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA-PNFGKDAGMLHDAFD-IES----L--KQLDAVITCQG   73 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC-CCSSSCCCBCEETTC-HHH----H--TTCSEEEECSC
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc-cccCCcceeeecccc-hhh----h--ccccEEEEecC
Confidence            6899999999999999865432    3566665533221110 011111111000111 111    1  36899999999


Q ss_pred             hHHHHHhhccccCCC---EEEEEec
Q 020487          218 ASYFQRNLGSLNIDG---RLFIIGT  239 (325)
Q Consensus       218 ~~~~~~~~~~l~~~g---~~v~~g~  239 (325)
                      ..........+...|   .+|+.+.
T Consensus        74 ~~~s~~~~~~l~~~g~~~~VIDlSs   98 (147)
T d1mb4a1          74 GSYTEKVYPALRQAGWKGYWIDAAS   98 (147)
T ss_dssp             HHHHHHHHHHHHHTTCCSEEEESSS
T ss_pred             chHHHHHhHHHHHcCCceEEEeCCc
Confidence            877665555544433   3666543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=82.82  E-value=0.38  Score=39.26  Aligned_cols=31  Identities=23%  Similarity=0.241  Sum_probs=25.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCE--EEEEe
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVR--VFVTA  171 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~--v~~~~  171 (325)
                      .+|||+||+|-+|..++..+...|.+  |++++
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d   35 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLD   35 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEe
Confidence            47999999999999998888777765  55444

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=82.51  E-value=0.61  Score=35.41  Aligned_cols=33  Identities=15%  Similarity=0.022  Sum_probs=27.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHH--CCCEEEEEecChh
Q 020487          142 SFLVHGGSSGIGTFAIQMGKC--QGVRVFVTAGSEE  175 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~--~g~~v~~~~~~~~  175 (325)
                      +|+|+|+ |+.|+.+++.++.  .|.+|+++++.+.
T Consensus         3 kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           3 QICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             eEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            7999998 9999999987654  4789999986653

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.30  E-value=3.7  Score=33.38  Aligned_cols=105  Identities=19%  Similarity=0.311  Sum_probs=65.9

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe---cChhhHHHHHHcCCCEEEeCCC----------------
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA---GSEEKLAVCKDLGADVCINYKT----------------  193 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~---~~~~~~~~~~~~g~~~~~~~~~----------------  193 (325)
                      +...++++..| |...+|..|.+++..++.+|.+.+++.   .++++.+.++.+|++.+.....                
T Consensus        90 ~~g~~~~~~~v-v~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~  168 (355)
T d1jbqa_          90 RDGTLKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRL  168 (355)
T ss_dssp             HHTCSCTTCEE-EEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHH
T ss_pred             HcCCcccCceE-EEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHH
Confidence            44455666655 555569999999999999999877776   3445677788888865432100                


Q ss_pred             --------------c------h---HHHHHHHHhCCCcccEEEeCCChHH----HHHhhccccCCCEEEEEec
Q 020487          194 --------------E------D---FVARVKEETGGKGVDVILDCMGASY----FQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       194 --------------~------~---~~~~~~~~~~~~~~d~vi~~~g~~~----~~~~~~~l~~~g~~v~~g~  239 (325)
                                    .      .   ...++.+.+++ .+|.++-++|+--    +...+....++-+++.+..
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~-~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep  240 (355)
T d1jbqa_         169 KNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDG-KLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP  240 (355)
T ss_dssp             HHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTT-CCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             HHhccccccccccCcccchhhhcccchhhhhhhcCC-CCCeeEecccCCchHHHHHHHHhhcCCcceEEeecc
Confidence                          0      0   01222233343 4799999988532    2344555667788876643

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.25  E-value=1.1  Score=31.72  Aligned_cols=35  Identities=17%  Similarity=0.132  Sum_probs=29.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSE  174 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~  174 (325)
                      -+.+|+|+|+ |.+|.=++..+.++|+ .|+++.+.+
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            4678999998 9999999999999998 577877643

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=82.21  E-value=0.71  Score=37.39  Aligned_cols=34  Identities=9%  Similarity=0.037  Sum_probs=27.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEE  175 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~  175 (325)
                      .+|+|+|| |..|++++..++..|  .+|++..+++.
T Consensus         5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            57999999 999999887665544  59999997753

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.87  E-value=3.6  Score=27.87  Aligned_cols=59  Identities=15%  Similarity=0.295  Sum_probs=45.9

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeC
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY  191 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
                      +.++++.-+.++..-.+-..-+.+++.++.+|. ++++...+.+..+.++++|++.++++
T Consensus        59 ~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p  118 (132)
T d1lssa_          59 EDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSP  118 (132)
T ss_dssp             HHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECH
T ss_pred             hhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECH
Confidence            566777777776654445667788889999987 78888888888888999999988853

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=81.82  E-value=0.11  Score=42.22  Aligned_cols=25  Identities=24%  Similarity=0.311  Sum_probs=22.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCE
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVR  166 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~  166 (325)
                      +|||+|++|-+|..++..+...|..
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~   26 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYP   26 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCT
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCC
Confidence            6999999999999999988887754

>d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein TM0922, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=81.66  E-value=3.6  Score=30.70  Aligned_cols=93  Identities=20%  Similarity=0.259  Sum_probs=53.0

Q ss_pred             CCEEEEEcC---CchHHHHHHHHHHHCCCEEEEEecChhhH-------HHHHHcCCCEEEeCCCchHHHHHHHHhCCCcc
Q 020487          140 GESFLVHGG---SSGIGTFAIQMGKCQGVRVFVTAGSEEKL-------AVCKDLGADVCINYKTEDFVARVKEETGGKGV  209 (325)
Q Consensus       140 ~~~vli~g~---~g~~G~~~~~~a~~~g~~v~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  209 (325)
                      ..+|+|+-+   +|+=|+++++.++..|++|.++...++..       ...++++...+ +......         ...+
T Consensus        40 ~~~vlvl~G~GNNGGDGl~~Ar~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---------~~~~  109 (211)
T d2ax3a2          40 DYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV-EQFEPSI---------LNEF  109 (211)
T ss_dssp             TCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE-SCCCGGG---------GGGC
T ss_pred             CCcEEEEECCCCCchhHHHHHHHHHhcCCeeEEEecCccCCcHHHHHHHHHHHcCCccc-ccccccc---------ccCc
Confidence            456666633   44556888888888899988877544322       22234554433 2222111         1268


Q ss_pred             cEEEeCC-Ch-------HHHHHhhccccCCC-EEEEEeccCC
Q 020487          210 DVILDCM-GA-------SYFQRNLGSLNIDG-RLFIIGTQGG  242 (325)
Q Consensus       210 d~vi~~~-g~-------~~~~~~~~~l~~~g-~~v~~g~~~~  242 (325)
                      |+++|+. |.       ..+..++++++... .++.+-.+.+
T Consensus       110 dlIIDal~G~Gl~~~l~~~~~~~i~~iN~~~~~vlsiDiPSG  151 (211)
T d2ax3a2         110 DVVVDAIFGTGLRGEITGEYAEIINLVNKSGKVVVSVDVPSG  151 (211)
T ss_dssp             SEEEEESCCTTCCSCCCHHHHHHHHHHHHSCCEEEEESSCTT
T ss_pred             eEEEEecccCCccccchHHHHHHHHHHHhhccceeeeccCcc
Confidence            9999997 32       23556666665544 5666655544

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.54  E-value=0.68  Score=34.12  Aligned_cols=32  Identities=9%  Similarity=0.089  Sum_probs=28.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      ..|+|+|+ |+.|+.++..+.+.|.+++++.+.
T Consensus         6 ~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~   37 (192)
T d1vdca1           6 TRLCIVGS-GPAAHTAAIYAARAELKPLLFEGW   37 (192)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCCEEECCS
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCcEEEEEee
Confidence            57999998 999999999999999999998743

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.34  E-value=0.85  Score=34.21  Aligned_cols=30  Identities=27%  Similarity=0.348  Sum_probs=27.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      ++|+|+ |+.|+.++..+.+.|.+|.++...
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESH   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            678898 999999999999999999999753

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.18  E-value=0.48  Score=36.04  Aligned_cols=34  Identities=12%  Similarity=-0.089  Sum_probs=28.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC-------CEEEEEecChh
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQG-------VRVFVTAGSEE  175 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g-------~~v~~~~~~~~  175 (325)
                      -+|+|+|+ |+.|++++..+...|       ++|++....+.
T Consensus         3 ~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~   43 (239)
T d1lqta2           3 YYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT   43 (239)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred             cEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCCC
Confidence            47999998 999999998887766       58999886543

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=81.16  E-value=0.67  Score=34.84  Aligned_cols=30  Identities=17%  Similarity=0.131  Sum_probs=27.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      ++|+|+ |+.|+.++..|.+.|.+|.++...
T Consensus         6 viIIGg-GpAGl~aA~~aar~G~~V~viE~~   35 (229)
T d3lada1           6 VIVIGA-GPGGYVAAIKSAQLGLKTALIEKY   35 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEecc
Confidence            778898 999999999999999999999853

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.12  E-value=1.9  Score=34.78  Aligned_cols=92  Identities=20%  Similarity=0.122  Sum_probs=51.0

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhh---HHHHHHcCCC---EEEeCCCchHHHHHHHHhCCC
Q 020487          135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK---LAVCKDLGAD---VCINYKTEDFVARVKEETGGK  207 (325)
Q Consensus       135 ~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~---~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~  207 (325)
                      ....+|++||-+|+ | .|..+..+++ .|+ +|++++.++.-   ++..++.+..   .++..+....      .....
T Consensus        34 ~~~~~~~~VLDlGc-G-tG~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l------~~~~~  104 (328)
T d1g6q1_          34 KDLFKDKIVLDVGC-G-TGILSMFAAK-HGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDV------HLPFP  104 (328)
T ss_dssp             HHHHTTCEEEEETC-T-TSHHHHHHHH-TCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS------CCSSS
T ss_pred             cccCCcCEEEEeCC-C-CCHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhc------cCccc
Confidence            34457899999997 3 3665554444 576 89999977531   1222333322   2333322221      12234


Q ss_pred             cccEEEeCCCh---------HH-HHHhhccccCCCEEE
Q 020487          208 GVDVILDCMGA---------SY-FQRNLGSLNIDGRLF  235 (325)
Q Consensus       208 ~~d~vi~~~g~---------~~-~~~~~~~l~~~g~~v  235 (325)
                      .+|+|+...-.         .. +...-+.|+|||.++
T Consensus       105 ~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         105 KVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             CEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             ceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            79998763221         12 333347899999885

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=80.93  E-value=5.5  Score=31.50  Aligned_cols=56  Identities=20%  Similarity=0.306  Sum_probs=38.9

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec---ChhhHHHHHHcCCCEEE
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDLGADVCI  189 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~---~~~~~~~~~~~g~~~~~  189 (325)
                      +...+.+++.| |...+|..|.+++..++..|.+.+++..   +..+...++.+|+..+.
T Consensus        54 ~~g~~~~~~~v-v~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~  112 (310)
T d1y7la1          54 KDGTLTKGKEI-VDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVL  112 (310)
T ss_dssp             HTTSSCTTCEE-EESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             HcCCCCCCcee-eeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEe
Confidence            34455677655 5555699999999999999997666653   33355666777776553

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=80.59  E-value=1.5  Score=32.25  Aligned_cols=39  Identities=13%  Similarity=0.006  Sum_probs=32.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD  182 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~  182 (325)
                      +|.|.|. |-+|+.++..+ ..|.+|+.++.++++.+.+++
T Consensus         2 kI~ViGl-G~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGS-GYVGLSLGVLL-SLQNEVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECC-SHHHHHHHHHH-TTTSEEEEECSCHHHHHHHHT
T ss_pred             EEEEECC-ChhHHHHHHHH-HCCCcEEEEECCHHHHHHHhh
Confidence            5889997 99999988766 469999999999988877754

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=80.54  E-value=0.66  Score=33.96  Aligned_cols=90  Identities=13%  Similarity=0.035  Sum_probs=53.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCh------hhHHHHH-Hc-C--CCEEEeCCCchHHHHHHHHhCCCccc
Q 020487          142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSE------EKLAVCK-DL-G--ADVCINYKTEDFVARVKEETGGKGVD  210 (325)
Q Consensus       142 ~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~------~~~~~~~-~~-g--~~~~~~~~~~~~~~~~~~~~~~~~~d  210 (325)
                      +|.|.|++|-+|.-+++++..+ .+++..+....      ++..... .+ +  ............        .....|
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~d   74 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDVRD--------FSADVD   74 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCGGG--------TCTTCC
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhhhh--------hhcccc
Confidence            6899999999999999999998 56776554221      1222221 11 1  111111111110        123689


Q ss_pred             EEEeCCChHHHHHhhcc-ccCCCEEEEEec
Q 020487          211 VILDCMGASYFQRNLGS-LNIDGRLFIIGT  239 (325)
Q Consensus       211 ~vi~~~g~~~~~~~~~~-l~~~g~~v~~g~  239 (325)
                      ++|-|.+.......... +..+-++++.+.
T Consensus        75 vvf~alp~~~s~~~~~~~~~~~~~vIDlSa  104 (179)
T d2g17a1          75 VVFLATAHEVSHDLAPQFLQAGCVVFDLSG  104 (179)
T ss_dssp             EEEECSCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred             eeeccccchhHHHHhhhhhhcCceeecccc
Confidence            99999998765544444 555667777644

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=80.31  E-value=0.95  Score=35.20  Aligned_cols=96  Identities=18%  Similarity=0.155  Sum_probs=60.0

Q ss_pred             hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHH----HHcCC-CEE--EeCCCchHHHHHHHHh
Q 020487          133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVC----KDLGA-DVC--INYKTEDFVARVKEET  204 (325)
Q Consensus       133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~----~~~g~-~~~--~~~~~~~~~~~~~~~~  204 (325)
                      +...+++..+||=+|+  +.|..+..++++. +.++++++. ++..+.+    .+.+. +.+  ...+...       ..
T Consensus        75 ~~~d~~~~~~vlDvG~--G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d~~~-------~~  144 (256)
T d1qzza2          75 DAYDWSAVRHVLDVGG--GNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-------PL  144 (256)
T ss_dssp             HTSCCTTCCEEEEETC--TTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-------CC
T ss_pred             hcCCCccCCEEEEECC--CCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeeeeccc-------cc
Confidence            4445677889999985  5688999999988 679999885 4434333    23332 222  2221111       01


Q ss_pred             CCCcccEEEeCC-----ChH----HHHHhhccccCCCEEEEEec
Q 020487          205 GGKGVDVILDCM-----GAS----YFQRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       205 ~~~~~d~vi~~~-----g~~----~~~~~~~~l~~~g~~v~~g~  239 (325)
                       ..++|+++-.-     +.+    .+..+.+.|+|||+++.+..
T Consensus       145 -p~~~D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         145 -PVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             -SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             -cccchhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence             13588887432     222    25677889999999998864

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.23  E-value=0.75  Score=34.93  Aligned_cols=30  Identities=20%  Similarity=0.176  Sum_probs=27.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487          143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  173 (325)
Q Consensus       143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~  173 (325)
                      ++|+|+ |+.|+.++..|.+.|.+|.++...
T Consensus         6 viVIG~-GpaGl~aA~~aa~~G~kV~viE~~   35 (235)
T d1h6va1           6 LIIIGG-GSGGLAAAKEAAKFDKKVMVLDFV   35 (235)
T ss_dssp             EEEECC-SHHHHHHHHHHGGGCCCEEEECCC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEecc
Confidence            789998 999999999999999999999843

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=80.21  E-value=3.2  Score=29.09  Aligned_cols=39  Identities=15%  Similarity=-0.073  Sum_probs=27.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH
Q 020487          141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  181 (325)
Q Consensus       141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~  181 (325)
                      ++|.++|. |.+|...+.-+...|..+ +..++.++.....
T Consensus         1 ekIg~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~   39 (156)
T d2cvza2           1 EKVAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQ   39 (156)
T ss_dssp             CCEEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHH
T ss_pred             CeEEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHH
Confidence            46889998 999988888777767655 4566666554443

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=80.15  E-value=1.3  Score=32.61  Aligned_cols=85  Identities=12%  Similarity=0.095  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487          139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  218 (325)
Q Consensus       139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  218 (325)
                      .+.+++|+|. |.+|..++++++.+|++|+..++......       ......  ..+. ++..     ..|++.-+.+-
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~-------~~~~~~--~~l~-ell~-----~sDii~i~~pl  106 (188)
T d1sc6a1          43 RGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPL-------GNATQV--QHLS-DLLN-----MSDVVSLHVPE  106 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCC-------TTCEEC--SCHH-HHHH-----HCSEEEECCCS
T ss_pred             cceEEEEeec-ccchhhhhhhcccccceEeeccccccchh-------hhhhhh--hhHH-HHHh-----hccceeecccC
Confidence            4789999998 99999999999999999999986533110       111111  1222 2222     46888877652


Q ss_pred             -HH----H-HHhhccccCCCEEEEEec
Q 020487          219 -SY----F-QRNLGSLNIDGRLFIIGT  239 (325)
Q Consensus       219 -~~----~-~~~~~~l~~~g~~v~~g~  239 (325)
                       +.    + ...++.|+++..+|-++.
T Consensus       107 t~~T~~li~~~~l~~mk~~a~lIN~aR  133 (188)
T d1sc6a1         107 NPSTKNMMGAKEISLMKPGSLLINASR  133 (188)
T ss_dssp             STTTTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             CcchhhhccHHHHhhCCCCCEEEEcCc
Confidence             21    2 466788888888887754