Citrus Sinensis ID: 020495

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-----
MGKKRKHTEIIEPTKKDDSVTEERPKRTLLGWKDKIEIKETEAPGVFRNKEKVLVTCSRRINFRYRHLMLNVVSLLPHCKKDNKVEAKSSKGATLNELVELKSCSSCLFFECRKHKDLYLWMAKSPNGPSVKFLVNAVHTMEELKLTGNHLKASRPLLTFSSNFGKDAHWKLIKEMIIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQVRKVLSFLLHFERKSLCSICIVDKIVLKTLMDSLGTSRMSLDMLGYVVGTIFCYFY
ccccccccccccccccccccccccccHcccccccccHccccccccccccccEEEEEccccccHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHccccCEEEEEECcccccEEEEECcccccCEEEEEEcEEEccccccccccccccccEEECcccccccHHHHHHHHHHHHccccccccccccccccEEEEEEEEccEEEEEEEEEEcccccccccccccccccEEEEEcccEEEEEEEEEccccccccEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEEEc
*********************************************VFRNKEKVLVTCSRRINFRYRHLMLNVVSLLPHCKKDNKVEAKSSKGATLNELVELKSCSSCLFFECRKHKDLYLWMAKSPNGPSVKFLVNAVHTMEELKLTGNHLKASRPLLTFSSNFGKDAHWKLIKEMIIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQITVPHNES******GLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQVRKVLSFLLHFERKSLCSICIVDKIVLKTLMDSLGTSRMSLDMLGYVVGTIFCYFY
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MGKKRKHTEIIEPTKKDDSVTEERPKRTLLGWKDKIEIKETEAPGVFRNKEKVLVTCSRRINFRYRHLMLNVVSLLPHCKKDNKVEAKSSKGATLNELVELKSCSSCLFFECRKHKDLYLWMAKSPNGPSVKFLVNAVHTMEELKLTGNHLKASRPLLTFSSNFGKDAHWKLIKEMIIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQITVPHNESDKVARGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQVRKVLSFLLHFERKSLCSICIVDKIVLKTLMDSLGTSRMSLDMLGYVVGTIFCYFY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Ribosome biogenesis protein BRX1 homolog Required for biogenesis of the 60S ribosomal subunit.probableQ4QQT6
Ribosome biogenesis protein BRX1 Required for biogenesis of the 60S ribosomal subunit.probableQ08235
Ribosome biogenesis protein BRX1 homolog Required for biogenesis of the 60S ribosomal subunit.probableQ8TDN6

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2CXH, chain A
Confidence level:confident
Coverage over the Query: 50-187
View the alignment between query and template
View the model in PyMOL