Citrus Sinensis ID: 020549

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320----
MDIDSGLKILNSKPTEESGHTQMESEESSALKANDKEKEEITESMDKLHIEESSSGLAGSSSINFKRKPVIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFALEWMQDFEVFQAAISSDHSYTSTLTNSLSLALDEFYKNLKSVGVSSVSGAGIEAYFKAVEESAQEFMETYKYCLP
ccccccccccccccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccccccccccccEEEEEEccccccHHHHHHHHHHHHHHccccCEEEEcccccccccccccccccccEEHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEcccccEEEEEccccHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccEEEEECcccccHHHHHHHHHHHHHHHHHccccccc
*****************************************************************KRKPVIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFALEWMQDFEVFQAAISSDHSYTSTLTNSLSLALDEFYKNLKSVGVSSVSGAGIEAYFKAVEESAQEFMETYKYCL*
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MDIDSGLKILNSKPTEESGHTQMESEESSALKANDKEKEEITESMDKLHIEESSSGLAGSSSINFKRKPVIIIVVGMAGSGKTTFMHRLVCHTQSRNIRGYVMNLDPAVMTLPFAANIDIRDTIRYKEVMKQFNLGPNGGILTSLNLFTTKFDEVISLIERRADHLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRSANPMTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHEFALEWMQDFEVFQAAISSDHSYTSTLTNSLSLALDEFYKNLKSVGVSSVSGAGIEAYFKAVEESAQEFMETYKYCLP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
GTPase NPA3 GTPase essential for viability. May have a role in mitotic exit.probableP47122
GPN-loop GTPase 1 homolog probableP46577
GPN-loop GTPase 1 Forms an interface between the RNA polymerase II enzyme and chaperone/scaffolding protein, suggesting that it is required to connect RNA polymerase II to regulators of protein complex formation. May be involved in nuclear localization of XPA.probableA4FUD1

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1YRB, chain A
Confidence level:very confident
Coverage over the Query: 66-316
View the alignment between query and template
View the model in PyMOL
Template: 4A9A, chain A
Confidence level:confident
Coverage over the Query: 32-94,108-122,137-143,163-312
View the alignment between query and template
View the model in PyMOL